TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115097.2.1
(987 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch ... 137 2e-082
gb|DR093057.1|DR093057 STRR1_5_F06.g1_A033 Stem Response Re... 138 8e-082
gb|DR096273.1|DR096273 STRR1_26_H05.g1_A033 Stem Response R... 138 8e-081
gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus... 135 9e-079
gb|DR055148.1|DR055148 RTCA1_21_G09.g2_A029 Roots minus cal... 138 2e-078
gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pin... 135 4e-077
gb|DT636492.1|DT636492 EST1151423 Normalized pine embryo li... 133 9e-077
gb|CF666895.1|CF666895 RTCNT1_26_G11.g1_A029 Root control P... 133 1e-076
gb|CF402042.1|CF402042 RTWW1_16_F09.g1_A015 Well-watered lo... 134 1e-075
gb|CF386766.1|CF386766 RTDR1_16_C08.g1_A015 Loblolly pine r... 136 2e-075
gb|CF400637.1|CF400637 RTWW1_6_B06.g1_A015 Well-watered lob... 136 2e-075
gb|DR051531.1|DR051531 RTBOR1_30_E09.g1_A029 Roots plus add... 138 3e-075
gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds 129 3e-074
gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds 129 3e-074
gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo li... 134 5e-074
gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus... 128 5e-074
gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from lobl... 134 6e-074
gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblo... 134 6e-074
gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine r... 134 6e-074
gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds 128 1e-073
gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds 129 1e-073
gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus mag... 129 2e-073
gb|DR011619.1|DR011619 HEAT1_6_G09.g1_A029 Root at 37 C for... 138 2e-073
gb|DR024833.1|DR024833 STRS1_67_F03.g1_A034 Shoot tip pitch... 138 2e-073
gb|CF668487.1|CF668487 RTCNT1_36_F12.g1_A029 Root control P... 138 2e-073
gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism... 128 4e-073
gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus... 127 6e-073
gb|DR019211.1|DR019211 STRS1_28_B06.g1_A034 Shoot tip pitch... 131 1e-072
gb|DR099166.1|DR099166 STRR1_53_C12.g1_A033 Stem Response R... 135 1e-072
gb|CF386013.1|CF386013 RTDR1_7_F11.g1_A015 Loblolly pine ro... 138 2e-072
gb|CO171305.1|CO171305 NDL1_20_C09.g1_A029 Needles control ... 128 5e-072
gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds 123 6e-072
gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus m... 128 7e-072
gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for... 128 1e-071
gb|DR080162.1|DR080162 RTFEPL1_20_E11.g1_A029 Roots plus ad... 138 3e-071
gb|DT633920.1|DT633920 EST1148851 Normalized pine embryo li... 152 5e-071
gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response R... 130 6e-071
gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch... 130 6e-071
gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed... 129 1e-070
gb|CO367487.1|CO367487 RTK1_34_D03.g1_A029 Roots minus pota... 127 3e-070
gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo li... 134 4e-070
gb|DR050310.1|DR050310 RTBOR1_22_D04.g1_A029 Roots plus add... 127 5e-070
gb|CX652556.1|CX652556 COLD1_59_H02.g1_A029 Root cold Pinus... 135 5e-070
gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from lobl... 127 6e-070
gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from lobl... 125 6e-070
gb|DT632413.1|DT632413 EST1147344 Normalized pine embryo li... 122 9e-070
gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control P... 127 9e-070
gb|CF391890.1|CF391890 RTDR3_10_G01.g1_A022 Loblolly pine r... 138 2e-069
gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo li... 127 2e-069
gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control P... 130 2e-069
gb|DR180723.1|DR180723 RTMNUT1_34_A06.g1_A029 Roots minus m... 117 3e-069
gb|DR070312.1|DR070312 RTDK1_12_C03.g1_A029 Roots, dark Pin... 128 9e-069
gb|DR098553.1|DR098553 STRR1_46_F12.b1_A033 Stem Response R... 135 2e-068
gb|DR120128.1|DR120128 RTMG1_27_E05.g2_A029 Roots minus mag... 138 2e-068
gb|DR090373.1|DR090373 RTAL1_14_D02.g1_A029 Roots plus adde... 135 2e-068
gb|DR093671.1|DR093671 STRR1_9_E07.g1_A033 Stem Response Re... 127 4e-068
gb|CV144435.1|CV144435 EST855644 Sequencing ESTs from loblo... 125 3e-067
gb|DR089298.1|DR089298 RTAL1_7_G03.g1_A029 Roots plus added... 138 3e-066
gb|CF479851.1|CF479851 RTWW3_12_D07.g1_A022 Well-watered lo... 138 9e-066
gb|DR051834.1|DR051834 RTBOR1_32_E10.g1_A029 Roots plus add... 127 2e-065
gb|DT632636.1|DT632636 EST1147567 Normalized pine embryo li... 127 3e-065
gb|CO362158.1|CO362158 RTK1_1_E05.g1_A029 Roots minus potas... 135 1e-064
gb|DR022663.1|DR022663 STRS1_52_D06.g1_A034 Shoot tip pitch... 138 5e-064
gb|CO368748.1|CO368748 RTK1_42_C07.g1_A029 Roots minus pota... 127 5e-063
gb|DR120161.1|DR120161 RTMG1_27_H07.g2_A029 Roots minus mag... 128 8e-063
gb|CX650703.1|CX650703 COLD1_47_B12.g1_A029 Root cold Pinus... 131 1e-062
gb|CO367410.1|CO367410 RTK1_34_D03.b1_A029 Roots minus pota... 127 1e-062
gb|BX253271.1|BX253271 BX253271 Pinus pinaster differenciat... 138 6e-062
gb|CX648594.1|CX648594 COLD1_29_D11.g1_A029 Root cold Pinus... 102 8e-062
gb|DR742067.1|DR742067 RTCU1_1_B09.g1_A029 Roots plus added... 102 8e-062
gb|DR097316.1|DR097316 STRR1_33_H05.g3_A033 Stem Response R... 122 1e-061
gb|DR096352.1|DR096352 STRR1_27_A07.g1_A033 Stem Response R... 138 1e-061
gb|CF477384.1|CF477384 RTWW3_7_A01.g1_A022 Well-watered lob... 127 1e-061
gb|BX251144.1|BX251144 BX251144 Pinus pinaster differenciat... 138 6e-061
gb|DR168497.1|DR168497 RTPHOS1_25_G11.g1_A029 Roots minus p... 127 6e-061
gb|BX682844.1|BX682844 BX682844 Pinus pinaster differenciat... 138 8e-061
gb|BX251613.1|BX251613 BX251613 Pinus pinaster differenciat... 138 8e-061
gb|DR692432.1|DR692432 EST1082520 Normalized pine embryo li... 116 1e-060
gb|DR687528.1|DR687528 EST1077610 Normalized pine embryo li... 135 2e-060
gb|DR092307.1|DR092307 RTAL1_28_G05.b1_A029 Roots plus adde... 135 3e-060
gb|BX254474.1|BX254474 BX254474 Pinus pinaster differenciat... 135 4e-060
gb|CF476071.1|CF476071 RTWW2_16_D03.g1_A021 Well-watered lo... 128 6e-060
gb|DR100480.1|DR100480 STRR1_64_A12.g1_A033 Stem Response R... 138 7e-060
gb|CO369598.1|CO369598 RTK1_48_F01.b1_A029 Roots minus pota... 128 1e-059
gb|DR072178.1|DR072178 RTDK1_24_C09.g1_A029 Roots, dark Pin... 135 5e-058
gb|CO200976.1|CO200976 RTCNT2_2_G03.g1_A029 Root control 2 ... 135 5e-058
gb|CO362167.1|CO362167 RTK1_1_F05.g1_A029 Roots minus potas... 132 2e-057
gb|DR096360.1|DR096360 STRR1_27_B05.g1_A033 Stem Response R... 130 8e-057
gb|CF663902.1|CF663902 RTCNT1_5_H12.g1_A029 Root control Pi... 131 1e-056
gb|DR683982.1|DR683982 EST1074058 Normalized pine embryo li... 126 3e-056
gb|DT631935.1|DT631935 EST1146866 Normalized pine embryo li... 126 3e-056
gb|DR056610.1|DR056610 RTCA1_31_A02.g1_A029 Roots minus cal... 138 5e-056
gb|DR168662.1|DR168662 RTPHOS1_27_B09.b1_A029 Roots minus p... 128 9e-056
gb|CF479898.1|CF479898 RTWW3_12_H04.g1_A022 Well-watered lo... 128 3e-055
gb|BM427751.1|BM427751 NXRV_002_G05_F NXRV (Nsf Xylem Root ... 120 3e-055
gb|AW011524.1|AW011524 ST21H02 Pine TriplEx shoot tip libra... 132 8e-055
gb|DR055601.1|DR055601 RTCA1_24_E10.g2_A029 Roots minus cal... 116 1e-054
gb|DR746394.1|DR746394 RTCU1_36_E04.g1_A029 Roots plus adde... 135 4e-054
gb|DR745029.1|DR745029 RTCU1_26_C03.g1_A029 Roots plus adde... 130 8e-054
gb|BF609490.1|BF609490 NXSI_043_C03_F NXSI (Nsf Xylem Side ... 122 5e-053
gb|CR393417.1|CR393417 CR393417 RN Pinus pinaster cDNA clon... 135 9e-053
gb|DR163422.1|DR163422 RTFE1_42_G07.g1_A029 Roots minus iro... 135 2e-052
gb|DR056635.1|DR056635 RTCA1_31_C07.g1_A029 Roots minus cal... 116 1e-051
gb|DR165660.1|DR165660 RTPHOS1_6_B10.g1_A029 Roots minus ph... 127 2e-051
gb|BX250040.1|BX250040 BX250040 Pinus pinaster differenciat... 110 7e-051
gb|CO166169.1|CO166169 FLD1_59_G05.g1_A029 Root flooded Pin... 93 9e-051
gb|CV035603.1|CV035603 RTNACL1_41_D10.b1_A029 Roots plus ad... 142 2e-050
gb|CO361435.1|CO361435 NDL2_4_G08.g1_A029 Needles control 2... 102 4e-050
gb|CX646780.1|CX646780 COLD1_11_B06.g1_A029 Root cold Pinus... 135 5e-050
gb|CX713463.1|CX713463 RTPQ1_9_C04.g1_A032 Roots treated wi... 135 9e-050
gb|DR023285.1|DR023285 STRS1_56_D02.g1_A034 Shoot tip pitch... 135 1e-049
gb|CF477424.1|CF477424 RTWW3_7_B01.g1_A022 Well-watered lob... 114 2e-048
gb|DT639052.1|DT639052 EST1153983 Normalized pine embryo li... 100 3e-048
gb|DR053875.1|DR053875 RTCA1_13_G12.g1_A029 Roots minus cal... 114 4e-048
gb|BX251561.1|BX251561 BX251561 Pinus pinaster differenciat... 138 1e-047
gb|DR113034.1|DR113034 RTS1_32_B12.g1_A029 Roots minus sulf... 135 4e-047
gb|BG275593.1|BG275593 NXSI_143_F09_F NXSI (Nsf Xylem Side ... 135 4e-047
gb|CF668454.1|CF668454 RTCNT1_36_C09.g1_A029 Root control P... 135 5e-047
gb|DR111040.1|DR111040 RTS1_14_G09.g1_A029 Roots minus sulf... 135 5e-047
gb|BF778581.1|BF778581 NXSI_088_D02_F NXSI (Nsf Xylem Side ... 123 3e-046
gb|BF518096.1|BF518096 NXSI_030_H10_F NXSI (Nsf Xylem Side ... 110 4e-046
gb|CF400653.1|CF400653 RTWW1_6_A01.g1_A015 Well-watered lob... 98 7e-046
gb|CV138360.1|CV138360 EST849569 Sequencing ESTs from loblo... 100 2e-045
gb|DR119250.1|DR119250 RTMG1_22_C11.b1_A029 Roots minus mag... 128 2e-045
gb|DR011201.1|DR011201 HEAT1_4_E06.b1_A029 Root at 37 C for... 128 2e-045
gb|DR119331.1|DR119331 RTMG1_22_C11.g1_A029 Roots minus mag... 128 2e-045
gb|CX650764.1|CX650764 COLD1_48_A05.b1_A029 Root cold Pinus... 134 8e-045
gb|AA556861.1|AA556861 703 Loblolly pine C Pinus taeda cDNA... 83 1e-044
gb|DR100599.1|DR100599 STRR1_65_E02.g1_A033 Stem Response R... 133 2e-044
gb|DR163235.1|DR163235 RTFE1_41_E12.g1_A029 Roots minus iro... 98 4e-044
gb|AW290718.1|AW290718 NXNV046B02F Nsf Xylem Normal wood Ve... 135 4e-044
gb|CD027376.1|CD027376 NXNV046B02 Nsf Xylem Normal wood Ver... 135 4e-044
gb|DR055444.1|DR055444 RTCA1_23_E11.g2_A029 Roots minus cal... 98 6e-044
gb|DR163745.1|DR163745 RTFE1_44_D12.g1_A029 Roots minus iro... 98 1e-043
gb|CO172418.1|CO172418 NDL1_29_D02.g1_A029 Needles control ... 98 1e-043
gb|BE762031.1|BE762031 NXCI_076_B10_F NXCI (Nsf Xylem Compr... 112 7e-043
gb|DR100574.1|DR100574 STRR1_65_E02.b1_A033 Stem Response R... 120 2e-042
gb|DR070179.1|DR070179 RTDK1_11_F07.g1_A029 Roots, dark Pin... 138 1e-041
gb|CF400025.1|CF400025 RTWW1_2_C11.g1_A015 Well-watered lob... 75 1e-041
gb|AA556812.1|AA556812 654 Loblolly pine C Pinus taeda cDNA... 82 3e-041
gb|BE049743.1|BE049743 NXNV_143_C08_F Nsf Xylem Normal wood... 125 3e-041
gb|CV035793.1|CV035793 RTNACL1_42_B01.g1_A029 Roots plus ad... 115 5e-041
gb|BF609532.1|BF609532 NXSI_043_G01_F NXSI (Nsf Xylem Side ... 130 7e-041
gb|CF475910.1|CF475910 RTWW2_15_D07.g1_A021 Well-watered lo... 98 2e-040
gb|CR393207.1|CR393207 CR393207 RN Pinus pinaster cDNA clon... 138 3e-040
gb|DR694543.1|DR694543 EST1084635 Normalized pine embryo li... 100 5e-040
gb|AW290022.1|AW290022 NXNV009F01F Nsf Xylem Normal wood Ve... 137 7e-040
gb|CD026679.1|CD026679 NXNV009F01 Nsf Xylem Normal wood Ver... 137 7e-040
gb|CF386668.1|CF386668 RTDR1_16_C08.b1_A015 Loblolly pine r... 116 1e-039
gb|DT637181.1|DT637181 EST1152112 Normalized pine embryo li... 98 2e-039
gb|BG039378.1|BG039378 NXSI_098_D11_F NXSI (Nsf Xylem Side ... 83 5e-039
gb|BQ198383.1|BQ198383 NXLV130_C02_F NXLV (Nsf Xylem Late w... 124 9e-039
gb|DR100138.1|DR100138 STRR1_62_B05.b1_A033 Stem Response R... 104 1e-037
gb|CF471900.1|CF471900 RTDS1_7_A08.b1_A015 Drought-stressed... 105 1e-037
gb|CF668214.1|CF668214 RTCNT1_35_D04.b1_A029 Root control P... 104 2e-037
gb|BF609081.1|BF609081 NXSI_040_B10_F NXSI (Nsf Xylem Side ... 103 4e-037
gb|DR163481.1|DR163481 RTFE1_43_D12.b1_A029 Roots minus iro... 98 7e-037
gb|CO361349.1|CO361349 NDL2_4_G08.b1_A029 Needles control 2... 98 7e-037
gb|DR163147.1|DR163147 RTFE1_41_E12.b1_A029 Roots minus iro... 98 7e-037
gb|DR102236.1|DR102236 STRR1_79_C04.g1_A033 Stem Response R... 138 9e-037
gb|DR015200.1|DR015200 STRS1_2_C05.b1_A034 Shoot tip pitch ... 100 2e-036
gb|DR102735.1|DR102735 STRR1_83_A06.g1_A033 Stem Response R... 100 2e-036
gb|DR010784.1|DR010784 HEAT1_1_F12.b1_A029 Root at 37 C for... 97 6e-036
gb|CV035673.1|CV035673 RTNACL1_41_D10.g1_A029 Roots plus ad... 142 1e-035
gb|DR163657.1|DR163657 RTFE1_44_D12.b1_A029 Roots minus iro... 98 3e-035
gb|DR071475.1|DR071475 RTDK1_20_C09.b1_A029 Roots, dark Pin... 98 3e-035
gb|CF474408.1|CF474408 RTWW2_20_A09.g1_A021 Well-watered lo... 96 3e-035
gb|DR050231.1|DR050231 RTBOR1_22_D04.b1_A029 Roots plus add... 95 2e-034
gb|BM367687.1|BM367687 NXLV_053_B09_F NXLV (Nsf Xylem Late ... 95 2e-034
gb|DR092975.1|DR092975 STRR1_5_F06.b1_A033 Stem Response Re... 96 3e-034
gb|BF517063.1|BF517063 NXSI_008_G03_F NXSI (Nsf Xylem Side ... 110 5e-034
gb|DR098461.1|DR098461 STRR1_45_E01.g1_A033 Stem Response R... 92 5e-034
gb|BF186094.1|BF186094 NXCI_132_F04_F NXCI (Nsf Xylem Compr... 92 5e-034
gb|AW290008.1|AW290008 NXNV009E08F Nsf Xylem Normal wood Ve... 100 2e-033
gb|CD026675.1|CD026675 NXNV009E08 Nsf Xylem Normal wood Ver... 100 2e-033
gb|CO168791.1|CO168791 NDL1_2_C05.g1_A029 Needles control P... 142 3e-033
gb|DR692513.1|DR692513 EST1082601 Normalized pine embryo li... 98 4e-033
gb|CX650634.1|CX650634 COLD1_47_B12.b1_A029 Root cold Pinus... 95 5e-033
gb|DR055518.1|DR055518 RTCA1_24_E10.b1_A029 Roots minus cal... 88 3e-032
gb|DR071242.1|DR071242 RTDK1_18_C12.g1_A029 Roots, dark Pin... 78 4e-032
gb|CF396870.1|CF396870 RTDS2_24_A10.g1_A021 Drought-stresse... 84 1e-031
gb|CO169428.1|CO169428 NDL1_7_B04.b1_A029 Needles control P... 79 2e-031
gb|AW985386.1|AW985386 NXNV_134_G08_F Nsf Xylem Normal wood... 135 5e-031
gb|BF049828.1|BF049828 NXCI_111_D09_F NXCI (Nsf Xylem Compr... 134 7e-031
gb|AA556399.1|AA556399 254 Loblolly pine C Pinus taeda cDNA... 131 1e-030
gb|DR090297.1|DR090297 RTAL1_14_D02.b1_A029 Roots plus adde... 79 3e-030
gb|DR112973.1|DR112973 RTS1_32_B12.b1_A029 Roots minus sulf... 79 3e-030
gb|DR090465.1|DR090465 RTAL1_15_E12.b1_A029 Roots plus adde... 79 5e-030
gb|DR071171.1|DR071171 RTDK1_18_C12.b1_A029 Roots, dark Pin... 77 2e-029
gb|DR024751.1|DR024751 STRS1_67_F03.b1_A034 Shoot tip pitch... 77 2e-029
gb|BM902805.1|BM902805 NXLV_075_E10_F NXLV (Nsf Xylem Late ... 129 2e-029
gb|CO368672.1|CO368672 RTK1_42_C07.b1_A029 Roots minus pota... 79 8e-029
gb|DR015024.1|DR015024 STRS1_1_B12.b1_A034 Shoot tip pitch ... 74 1e-028
gb|AW587662.1|AW587662 ST63B06 Pine TriplEx shoot tip libra... 126 3e-028
gb|DR047687.1|DR047687 RTBOR1_2_F07.g1_A029 Roots plus adde... 74 4e-028
gb|CF400511.1|CF400511 RTWW1_6_B06.b1_A015 Well-watered lob... 80 5e-028
gb|AW697618.1|AW697618 ST61B04 Pine TriplEx shoot tip libra... 124 8e-028
gb|CF399941.1|CF399941 RTWW1_2_C11.b1_A015 Well-watered lob... 75 2e-027
gb|BE582419.1|BE582419 NXCI_033_B08_F NXCI (Nsf Xylem Compr... 108 3e-027
gb|CX649395.1|CX649395 COLD1_35_B04.b1_A029 Root cold Pinus... 73 3e-027
gb|BF777631.1|BF777631 NXSI_070_G06_F NXSI (Nsf Xylem Side ... 122 4e-027
gb|CX649869.1|CX649869 COLD1_42_B01.b1_A029 Root cold Pinus... 73 4e-027
gb|BE761955.1|BE761955 NXCI_075_C03_F NXCI (Nsf Xylem Compr... 120 1e-026
gb|DR079899.1|DR079899 RTFEPL1_18_B10.g1_A029 Roots plus ad... 120 1e-026
gb|DT635613.1|DT635613 EST1150544 Normalized pine embryo li... 46 1e-026
gb|CO171240.1|CO171240 NDL1_20_C09.b1_A029 Needles control ... 68 2e-026
gb|DR021638.1|DR021638 STRS1_46_B05.b1_A034 Shoot tip pitch... 73 6e-026
gb|BF517775.1|BF517775 NXSI_031_A12_F NXSI (Nsf Xylem Side ... 118 7e-026
gb|BQ635086.1|BQ635086 NXRV076_G12_F NXRV (Nsf Xylem Root w... 118 7e-026
gb|BQ107011.1|BQ107011 NXLV085_E06_F NXLV (Nsf Xylem Late w... 73 8e-026
gb|DR090533.1|DR090533 RTAL1_15_E12.g1_A029 Roots plus adde... 68 4e-025
gb|BF610570.1|BF610570 NXSI_060_B07_F NXSI (Nsf Xylem Side ... 110 4e-025
gb|DR054266.1|DR054266 RTCA1_16_F08.b1_A029 Roots minus cal... 71 7e-025
gb|CF475767.1|CF475767 RTWW2_15_D07.b1_A021 Well-watered lo... 71 7e-025
gb|AW698040.1|AW698040 NXNV_078_B06_F Nsf Xylem Normal wood... 114 9e-025
gb|BM158415.1|BM158415 NXLV_034_B09_F NXLV (Nsf Xylem Late ... 74 9e-025
gb|BQ654413.1|BQ654413 NXRV080_A02_F NXRV (Nsf Xylem Root w... 110 9e-025
gb|CX651774.1|CX651774 COLD1_54_E06.g1_A029 Root cold Pinus... 108 1e-024
gb|CO369680.1|CO369680 RTK1_48_F01.g1_A029 Roots minus pota... 69 3e-024
gb|DR162969.1|DR162969 RTFE1_23_E05.b1_A029 Roots minus iro... 111 8e-024
gb|DR092690.1|DR092690 STRR1_3_D06.b1_A033 Stem Response Re... 73 1e-023
gb|BF778542.1|BF778542 NXSI_085_H09_F NXSI (Nsf Xylem Side ... 73 1e-023
gb|BF186130.1|BF186130 NXCI_133_A11_F NXCI (Nsf Xylem Compr... 110 2e-023
gb|BF609736.1|BF609736 NXSI_048_G12_F NXSI (Nsf Xylem Side ... 110 2e-023
gb|DR089220.1|DR089220 RTAL1_7_G03.b1_A029 Roots plus added... 73 4e-023
gb|AW698185.1|AW698185 NXNV_074_D07_F Nsf Xylem Normal wood... 71 5e-023
gb|DR689717.1|DR689717 EST1079803 Normalized pine embryo li... 46 8e-022
gb|CO201071.1|CO201071 RTCNT2_3_A06.g1_A029 Root control 2 ... 71 9e-022
gb|AW290421.1|AW290421 NXNV020D02F Nsf Xylem Normal wood Ve... 78 1e-021
gb|CD027081.1|CD027081 NXNV020D02 Nsf Xylem Normal wood Ver... 78 1e-021
gb|DR070227.1|DR070227 RTDK1_12_C03.b1_A029 Roots, dark Pin... 73 2e-021
gb|CF668373.1|CF668373 RTCNT1_36_C09.b1_A029 Root control P... 73 2e-021
gb|CF385705.1|CF385705 RTDR1_5_F10.g1_A015 Loblolly pine ro... 99 3e-021
>gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_C05_A034 5', mRNA sequence
Length = 848
Score = 137 bits (294), Expect(3) = 2e-082
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = -1 / +2
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + GPW AHATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C
Sbjct: 131 GVYFPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGAC 310
Query: 801 YEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
+E++CV+ P C P +++VT T+ CPP
Sbjct: 311 FEIKCVNDPEWCHPGNPSILVTATNFCPP 397
Score = 135 bits (290), Expect(3) = 2e-082
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 428 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 607
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 608 AGAGDLVRVSVKGSQ 652
Score = 93.2 bits (197), Expect(3) = 3e-038
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -3
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 648 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 469
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 468 GMERSKWGRGGLH 430
Score = 77.1 bits (162), Expect(3) = 3e-038
Identities = 40/85 (47%), Positives = 43/85 (50%)
Frame = +2 / -3
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 399 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 220
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P AP +VP+ S PP*KVA A F GP
Sbjct: 219 PQAPPMVPEASLPP*KVACASFQGP 145
Score = 73.0 bits (153), Expect(3) = 2e-082
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
W + RNWGQ WQ L +SL+FR+ SD R +TSW+++P +W+FG T+ +
Sbjct: 659 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQ 823
Score = 27.2 bits (53), Expect(3) = 3e-038
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1 / -2
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
A+LP+ NVP G V + E + L + LP L PV+ P
Sbjct: 802 AKLPIWRHNVPGCGGPAVTASYSEGEALPDQNGAALPILAPVSGQWNP 659
>gb|DR093057.1|DR093057 STRR1_5_F06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_F06_A033 5', mRNA sequence
Length = 884
Score = 138 bits (295), Expect(3) = 8e-082
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = -1 / +3
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + GPW AHATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C
Sbjct: 114 GVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGAC 293
Query: 801 YEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
+E++CV+ P C P +++VT T+ CPP
Sbjct: 294 FEIKCVNDPEWCHPGNPSILVTATNFCPP 380
Score = 135 bits (290), Expect(3) = 8e-082
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 411 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 590
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 591 AGAGDLVRVSVKGSQ 635
Score = 93.2 bits (197), Expect(3) = 3e-038
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -2
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 631 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 452
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 451 GMERSKWGRGGLH 413
Score = 77.1 bits (162), Expect(3) = 3e-038
Identities = 40/85 (47%), Positives = 43/85 (50%)
Frame = +2 / -2
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 382 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 203
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P AP +VP+ S PP*KVA A F GP
Sbjct: 202 PQAPPMVPEASLPP*KVACASFQGP 128
Score = 70.3 bits (147), Expect(3) = 8e-082
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
W + RNWGQ WQ L +SL+FR+ SD R + SW+++P +W+FG T+ +
Sbjct: 642 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSISWNIVPPNWEFGQTFSGKQ 806
Score = 27.2 bits (53), Expect(3) = 3e-038
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1 / -1
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
A+LP+ NVP G V + E + L + LP L PV+ P
Sbjct: 785 AKLPIWRHNVPGYGGPAVTASYSEGEALPDQNGAALPILAPVSGQWNP 642
>gb|DR096273.1|DR096273 STRR1_26_H05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_H05_A033 5', mRNA sequence
Length = 801
Score = 138 bits (295), Expect(3) = 8e-081
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = -1 / +3
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + GPW AHATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C
Sbjct: 129 GVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGAC 308
Query: 801 YEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
+E++CV+ P C P +++VT T+ CPP
Sbjct: 309 FEIKCVNDPEWCHPGNPSILVTATNFCPP 395
Score = 135 bits (290), Expect(3) = 8e-081
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 426 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 605
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 606 AGAGDLVRVSVKGSQ 650
Score = 93.2 bits (197), Expect(3) = 8e-038
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -3
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 646 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 467
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 466 GMERSKWGRGGLH 428
Score = 77.1 bits (162), Expect(3) = 8e-038
Identities = 40/85 (47%), Positives = 43/85 (50%)
Frame = +2 / -3
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 397 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 218
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P AP +VP+ S PP*KVA A F GP
Sbjct: 217 PQAPPMVPEASLPP*KVACASFQGP 143
Score = 67.0 bits (140), Expect(3) = 8e-081
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFG 328
W + RNWGQ WQ L +SL+FR+ SD + +TSW+++P +W+FG
Sbjct: 657 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDPQTSTSWNIVPPNWEFG 800
Score = 25.8 bits (50), Expect(3) = 8e-038
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1 / -2
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
A+LP+ NVP G V + E + L + LP L PV+ P
Sbjct: 800 AKLPIWRHNVPGCGGLRVTASYSEGEALPDQNGAALPILAPVSGQWNP 657
>gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_35_B04_A029 5', mRNA sequence
Length = 670
Score = 135 bits (290), Expect(3) = 9e-079
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 286 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 465
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 466 AGAGDLVRVSVKGSQ 510
Score = 125 bits (267), Expect(3) = 9e-079
Identities = 44/79 (55%), Positives = 57/79 (72%)
Frame = -1 / +1
Query: 951 AHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPS 772
AHATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C+E++CV+ P
Sbjct: 19 AHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPE 198
Query: 771 GCKPDAAALVVTVTDLCPP 715
C P +++VT T+ CPP
Sbjct: 199 WCHPGNPSILVTATNFCPP 255
Score = 93.2 bits (197), Expect(3) = 1e-035
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -3
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 506 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 327
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 326 GMERSKWGRGGLH 288
Score = 73.0 bits (153), Expect(3) = 9e-079
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTY 319
W + RNWGQ WQ L +SL+FRV SD R +TSW+++P +W+FG T+
Sbjct: 517 WIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTF 669
Score = 68.4 bits (143), Expect(3) = 1e-035
Identities = 37/80 (46%), Positives = 40/80 (50%)
Frame = +2 / -3
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 257 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 78
Query: 893 PHAPAVVPDPSRPP*KVAWA 952
P AP +VP+ S PP*KVA A
Sbjct: 77 PQAPPMVPEASLPP*KVACA 18
Score = 27.2 bits (53), Expect(3) = 1e-035
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1 / -2
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
A+LP+ NVP G V + E + L + LP L PV+ P
Sbjct: 660 AKLPIWRHNVPGCGGPAVTASYSEGEALPDQDGAALPILAPVSGQWNP 517
>gb|DR055148.1|DR055148 RTCA1_21_G09.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_21_G09_A029 5', mRNA sequence
Length = 722
Score = 138 bits (295), Expect(3) = 2e-078
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = -1 / +3
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + GPW AHATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C
Sbjct: 63 GVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGAC 242
Query: 801 YEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
+E++CV+ P C P +++VT T+ CPP
Sbjct: 243 FEIKCVNDPEWCHPGNPSILVTATNFCPP 329
Score = 135 bits (290), Expect(3) = 2e-078
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 360 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 539
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 540 AGAGDLVRVSVKGSQ 584
Score = 93.2 bits (197), Expect(2) = 2e-035
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -2
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 580 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 401
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 400 GMERSKWGRGGLH 362
Score = 77.1 bits (162), Expect(2) = 2e-035
Identities = 40/85 (47%), Positives = 43/85 (50%)
Frame = +2 / -2
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 331 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 152
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P AP +VP+ S PP*KVA A F GP
Sbjct: 151 PQAPPMVPEASLPP*KVACASFQGP 77
Score = 58.8 bits (122), Expect(3) = 2e-078
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLP 346
W + RNWGQ WQ L +SL+FR+ SD R +TSW+++P
Sbjct: 591 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVP 716
>gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_11_D01_A029 5', mRNA sequence
Length = 748
Score = 135 bits (290), Expect(3) = 4e-077
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 263 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 442
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 443 AGAGDLVRVSVKGSQ 487
Score = 119 bits (255), Expect(3) = 4e-077
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = -1 / +2
Query: 945 ATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSGC 766
ATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C+E++CV+ P C
Sbjct: 2 ATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWC 181
Query: 765 KPDAAALVVTVTDLCPP 715
P +++VT T+ CPP
Sbjct: 182 HPGNPSILVTATNFCPP 232
Score = 93.2 bits (197), Expect(3) = 2e-035
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -2
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 483 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 304
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 303 GMERSKWGRGGLH 265
Score = 73.0 bits (153), Expect(3) = 4e-077
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
W + RNWGQ WQ L +SL+FR+ SD R +TSW+++P +W+FG T+ +
Sbjct: 494 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQ 658
Score = 67.5 bits (141), Expect(3) = 2e-035
Identities = 36/78 (46%), Positives = 39/78 (50%)
Frame = +2 / -2
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 234 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 55
Query: 893 PHAPAVVPDPSRPP*KVA 946
P AP +VP+ S PP*KVA
Sbjct: 54 PQAPPMVPEASLPP*KVA 1
Score = 27.2 bits (53), Expect(3) = 2e-035
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1 / -1
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
A+LP+ NVP G V + E + L + LP L PV+ P
Sbjct: 637 AKLPIWRHNVPGCGGPAVTASYSEGEALPDQNGAALPILAPVSGQWNP 494
>gb|DT636492.1|DT636492 EST1151423 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGS45 3' end, mRNA sequence
Length = 833
Score = 133 bits (286), Expect(3) = 9e-077
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 273 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 452
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VS KGS+
Sbjct: 453 AGAGDLVRVSAKGSQ 497
Score = 119 bits (255), Expect(3) = 9e-077
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = -1 / +3
Query: 945 ATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSGC 766
ATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C+E++CV+ P C
Sbjct: 12 ATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWC 191
Query: 765 KPDAAALVVTVTDLCPP 715
P +++VT T+ CPP
Sbjct: 192 HPGNPSILVTATNFCPP 242
Score = 90.9 bits (192), Expect(3) = 1e-034
Identities = 42/73 (57%), Positives = 45/73 (61%)
Frame = +2 / -2
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPF T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 493 LPFALTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 314
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 313 GMERSKWGRGGLH 275
Score = 73.5 bits (154), Expect(3) = 9e-077
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
W + RNWGQ WQ L +SL+FRV SD R +TSW+++P +W+FG T+ +
Sbjct: 504 WIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTFSGKQ 668
Score = 67.5 bits (141), Expect(3) = 1e-034
Identities = 36/78 (46%), Positives = 39/78 (50%)
Frame = +2 / -2
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 244 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 65
Query: 893 PHAPAVVPDPSRPP*KVA 946
P AP +VP+ S PP*KVA
Sbjct: 64 PQAPPMVPEASLPP*KVA 11
Score = 27.2 bits (53), Expect(3) = 1e-034
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1 / -1
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
A+LP+ NVP G V + E + L + LP L PV+ P
Sbjct: 647 AKLPIWRHNVPGCGGPAVTASYSEGEALPDQDGAALPILAPVSGQWNP 504
>gb|CF666895.1|CF666895 RTCNT1_26_G11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_26_G11_A029 5', mRNA sequence
Length = 779
Score = 133 bits (285), Expect(3) = 1e-076
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = -1 / +1
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W AHATFYGG D +GT AGACGY + +QGYG T A+ST LF G +CG C+E++C
Sbjct: 115 GGWNYAHATFYGGADAAGTMAGACGYGNLYSQGYGTNTAALSTALFNSGASCGACFEIKC 294
Query: 786 VDSPSGCKPDAAALVVTVTDLCPP 715
VD P C P + ++V+T T+ CPP
Sbjct: 295 VDDPQWCLPGSPSIVITATNFCPP 366
Score = 128 bits (275), Expect(3) = 1e-076
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPREHFD++MPAF QI KAGIVPI Y+RVAC K+GG+R+TI GN YF ++ +TNV
Sbjct: 397 WCNPPREHFDMAMPAFEQIGIWKAGIVPIQYKRVACVKEGGMRFTINGNYYFYLILVTNV 576
Query: 525 GGAGDIAAVSVKGS 484
GG G +A V VKGS
Sbjct: 577 GGDGVVADVKVKGS 618
Score = 91.8 bits (194), Expect(3) = 3e-033
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = +2 / -1
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
PFT T+A +P+PPT V K P+MV +PP F HATL IGT+PAF I NAG
Sbjct: 614 PFTFTSATTPSPPTFVTRMR*K**LPLMVNLIPPSFTHATLLYWIGTIPAFQMPICSNAG 435
Query: 668 MLRSKCSRGGLHH 706
+ SKCSRGGLHH
Sbjct: 434 IAMSKCSRGGLHH 396
Score = 64.3 bits (134), Expect(3) = 1e-076
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVT 322
W + RNWGQ WQ+ L ++L+F+V +S R TS++V P+DW+FG T
Sbjct: 628 WLPLTRNWGQNWQSNSILKGQALSFQVTSSGGRTVTSYNVAPSDWQFGQT 777
Score = 49.6 bits (102), Expect(3) = 3e-033
Identities = 24/53 (45%), Positives = 25/53 (47%)
Frame = +2 / -1
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYP 871
LGG + V V T G H G STH S H PQ P VL A V PYP
Sbjct: 368 LGGQKLVAVMTIEGLPGRHHCGSSTHFISKHAPQDAPLLKRAVLRAAVLVPYP 210
Score = 39.1 bits (79), Expect(3) = 3e-033
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +2 / -1
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P APA+VP S PP*KVA A FH P
Sbjct: 188 PQAPAIVPAASAPP*KVA*A*FHPP 114
>gb|CF402042.1|CF402042 RTWW1_16_F09.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_16_F09_A015 5', mRNA sequence
Length = 753
Score = 134 bits (287), Expect(3) = 1e-075
Identities = 48/84 (57%), Positives = 59/84 (70%)
Frame = -1 / +1
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W AHATFYGG D SGT GACGY + +QGYG T A+STVLF G +CG C+E++C
Sbjct: 100 GGWHYAHATFYGGADASGTMQGACGYGNLYSQGYGTNTAALSTVLFNSGASCGSCFEIKC 279
Query: 786 VDSPSGCKPDAAALVVTVTDLCPP 715
VD P C P + ++VVT T+ CPP
Sbjct: 280 VDDPQWCLPGSPSIVVTATNFCPP 351
Score = 131 bits (280), Expect(3) = 1e-075
Identities = 50/74 (67%), Positives = 59/74 (79%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPREHFD++MPAF QI KAGIVP+ YRRVAC K+GGIR+TI GN YF ++ +TNV
Sbjct: 382 WCNPPREHFDMAMPAFEQIGIWKAGIVPVQYRRVACVKEGGIRFTINGNYYFYLILVTNV 561
Query: 525 GGAGDIAAVSVKGS 484
GG G +A V VKGS
Sbjct: 562 GGDGVVADVKVKGS 603
Score = 85.4 bits (180), Expect(4) = 3e-034
Identities = 39/72 (54%), Positives = 46/72 (63%)
Frame = +2 / -2
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
PFT T+A +P+PPT V K P+MV +PP F HATL GT+PAF I NAG
Sbjct: 599 PFTFTSATTPSPPTFVTRMR*K**LPLMVNLIPPSFTHATLLYWTGTIPAFHMPICSNAG 420
Query: 668 MLRSKCSRGGLH 703
+ SKCSRGGLH
Sbjct: 419 IAMSKCSRGGLH 384
Score = 57.9 bits (120), Expect(3) = 1e-075
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKF 331
W + RNWGQ WQ L ++L+FRV +S R TS++V P+ W+F
Sbjct: 613 WLPLSRNWGQNWQCNTILKGQALSFRVTSSGGRPVTSYNVAPSHWQF 753
Score = 49.2 bits (101), Expect(4) = 3e-034
Identities = 25/53 (47%), Positives = 26/53 (49%)
Frame = +2 / -2
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYP 871
LGG + V VTT G H G STH S H PQ P TVL A V P P
Sbjct: 353 LGGQKLVAVTTIEGLPGRHHWGSSTHFISKHDPQDAPLLKRTVLRAAVLVP*P 195
Score = 38.2 bits (77), Expect(4) = 3e-034
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +2 / -2
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
PHAP +VP+ S PP*KVA A H P
Sbjct: 173 PHAPCMVPEASAPP*KVA*A*CHPP 99
Score = 28.6 bits (56), Expect(4) = 3e-034
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +2 / -2
Query: 332 NFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVH 472
N Q G T EV R L +TR +R C CPQ R H
Sbjct: 752 NCQWEGATL*EVTGRPPLEVTRKERACPLRMVLHCQFCPQFRLRGSH 612
>gb|CF386766.1|CF386766 RTDR1_16_C08.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_16_C08_A015 5', mRNA
sequence
Length = 774
Score = 136 bits (291), Expect(3) = 2e-075
Identities = 53/74 (71%), Positives = 61/74 (82%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPREHFD++MPAF QIA KAGIVP+ YRRV CAK GGIR+TI GN+YF ++ ITNV
Sbjct: 400 WCNPPREHFDMAMPAFEQIAIWKAGIVPVQYRRVRCAKGGGIRFTIHGNRYFYLILITNV 579
Query: 525 GGAGDIAAVSVKGS 484
GG GD+A V VKGS
Sbjct: 580 GGDGDVAEVMVKGS 621
Score = 124 bits (266), Expect(3) = 2e-075
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = -1 / +1
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W AHAT YGG D +G AGACGY + +QGYG T A+S +LF G ACG C+E++C
Sbjct: 118 GDWNSAHATLYGGGDAAGIMAGACGYGNLYSQGYGTNTAALSAILFDSGAACGACFEIKC 297
Query: 786 VDSPSGCKPDAAALVVTVTDLCPP 715
VD C P + ++V+T T+ CPP
Sbjct: 298 VDDSQWCLPGSPSVVITATNFCPP 369
Score = 89.5 bits (189), Expect(3) = 3e-036
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = +2 / -2
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
PFT T+A SP+PPT VI K FP MV R+PP A TL GT+PAF AI AG
Sbjct: 617 PFTITSATSPSPPTFVIRMR*K*RFP*MVNRIPPPLAQRTLLYWTGTIPAFQMAICSKAG 438
Query: 668 MLRSKCSRGGLHH 706
+ SKCSRGGLHH
Sbjct: 437 IAMSKCSRGGLHH 399
Score = 76.7 bits (161), Expect(3) = 3e-036
Identities = 38/86 (44%), Positives = 45/86 (52%)
Frame = +2 / -2
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V V T+ G H STH S PQA P N L+A V PYP Y
Sbjct: 371 LGGQKLVAVITTDGLPGRHHCESSTHFISKQAPQAAPLSNRIALSAAVLVPYP*LYKFPY 192
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGPA 970
P APA++P S PP*+VA A F P+
Sbjct: 191 PQAPAMIPAASPPP*RVA*AEFQSPS 114
Score = 62.0 bits (129), Expect(3) = 2e-075
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFG 328
W + RNWGQ WQ+ +L ++L+F+V +S TS++V P+DW+FG
Sbjct: 631 WLPLTRNWGQNWQSNTNLQGQALSFQVSSSSGHTITSYNVAPSDWQFG 774
Score = 24.4 bits (47), Expect(3) = 3e-036
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1 / -1
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRPL 474
+ELPV +V * AG + + L E+ GLP L PV +P+
Sbjct: 774 SELPVRRSHVI*SNGVATAGANLK**SLPLEIGIGLPVLSPVPRQWQPV 628
>gb|CF400637.1|CF400637 RTWW1_6_B06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_6_B06_A015 5', mRNA sequence
Length = 761
Score = 136 bits (291), Expect(3) = 2e-075
Identities = 53/74 (71%), Positives = 61/74 (82%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPREHFD++MPAF QIA KAGIVP+ YRRV CAK GGIR+TI GN+YF ++ ITNV
Sbjct: 387 WCNPPREHFDMAMPAFEQIAIWKAGIVPVQYRRVRCAKGGGIRFTIHGNRYFYLILITNV 566
Query: 525 GGAGDIAAVSVKGS 484
GG GD+A V VKGS
Sbjct: 567 GGDGDVAEVMVKGS 608
Score = 124 bits (266), Expect(3) = 2e-075
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = -1 / +3
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W AHAT YGG D +G AGACGY + +QGYG T A+S +LF G ACG C+E++C
Sbjct: 105 GDWNSAHATLYGGGDAAGIMAGACGYGNLYSQGYGTNTAALSAILFDSGAACGACFEIKC 284
Query: 786 VDSPSGCKPDAAALVVTVTDLCPP 715
VD C P + ++V+T T+ CPP
Sbjct: 285 VDDSQWCLPGSPSVVITATNFCPP 356
Score = 89.5 bits (189), Expect(3) = 3e-036
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = +2 / -2
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
PFT T+A SP+PPT VI K FP MV R+PP A TL GT+PAF AI AG
Sbjct: 604 PFTITSATSPSPPTFVIRMR*K*RFP*MVNRIPPPLAQRTLLYWTGTIPAFQMAICSKAG 425
Query: 668 MLRSKCSRGGLHH 706
+ SKCSRGGLHH
Sbjct: 424 IAMSKCSRGGLHH 386
Score = 76.7 bits (161), Expect(3) = 3e-036
Identities = 38/86 (44%), Positives = 45/86 (52%)
Frame = +2 / -2
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V V T+ G H STH S PQA P N L+A V PYP Y
Sbjct: 358 LGGQKLVAVITTDGLPGRHHCESSTHFISKQAPQAAPLSNRIALSAAVLVPYP*LYKFPY 179
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGPA 970
P APA++P S PP*+VA A F P+
Sbjct: 178 PQAPAMIPAASPPP*RVA*AEFQSPS 101
Score = 62.0 bits (129), Expect(3) = 2e-075
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFG 328
W + RNWGQ WQ+ +L ++L+F+V +S TS++V P+DW+FG
Sbjct: 618 WLPLTRNWGQNWQSNTNLQGQALSFQVSSSSGHTITSYNVAPSDWQFG 761
Score = 24.4 bits (47), Expect(3) = 3e-036
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1 / -1
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRPL 474
+ELPV +V * AG + + L E+ GLP L PV +P+
Sbjct: 761 SELPVRRSHVI*SNGVATAGANLK**SLPLEIGIGLPVLSPVPRQWQPV 615
>gb|DR051531.1|DR051531 RTBOR1_30_E09.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_30_E09_A029 5', mRNA sequence
Length = 798
Score = 138 bits (295), Expect(3) = 3e-075
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = -1 / +2
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + GPW AHATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C
Sbjct: 158 GVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGAC 337
Query: 801 YEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
+E++CV+ P C P +++VT T+ CPP
Sbjct: 338 FEIKCVNDPEWCHPGNPSILVTATNFCPP 424
Score = 135 bits (290), Expect(3) = 3e-075
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 455 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 634
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 635 AGAGDLVRVSVKGSQ 679
Score = 93.2 bits (197), Expect(2) = 2e-035
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -1
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 675 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 496
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 495 GMERSKWGRGGLH 457
Score = 77.1 bits (162), Expect(2) = 2e-035
Identities = 40/85 (47%), Positives = 43/85 (50%)
Frame = +2 / -1
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 426 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 247
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P AP +VP+ S PP*KVA A F GP
Sbjct: 246 PQAPPMVPEASLPP*KVACASFQGP 172
Score = 48.3 bits (99), Expect(3) = 3e-075
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATS 361
W + RNWGQ WQ L +SL+FR+ SD R +TS
Sbjct: 686 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTS 796
>gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds
Length = 998
Score = 129 bits (277), Expect(3) = 3e-074
Identities = 47/75 (62%), Positives = 62/75 (82%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAFL+IA+ + GIVPI Y RV C ++GGIR+T+ G+ YFN+V ITNV
Sbjct: 450 WCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNV 629
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVS+KGS+
Sbjct: 630 GGAGDVHAVSIKGSR 674
Score = 118 bits (252), Expect(3) = 3e-074
Identities = 43/77 (55%), Positives = 50/77 (64%)
Frame = -1 / +3
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF DG +CG CYE+RC
Sbjct: 174 GGWESAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMRC 353
Query: 786 VDSPSGCKPDAAALVVT 736
D P C P + T
Sbjct: 354 NDDPQWCLPGTVTVTAT 404
Score = 90.4 bits (191), Expect(3) = 1e-039
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / -2
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
PF +TA SPAPPTLV+ T LKY +P V R+PP TL * +GT+P AI+R AG
Sbjct: 667 PFMETAWTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAG 488
Query: 668 MLRSKCSRGGLHH 706
SKC GGLHH
Sbjct: 487 SAISKCCSGGLHH 449
Score = 70.7 bits (148), Expect(3) = 3e-074
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = -1 / +3
Query: 480 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
R W M RNWGQ WQ+ L +SL+F+V TSD R S +V P++W+FG T++ S+
Sbjct: 672 RSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 845
Score = 70.7 bits (148), Expect(3) = 1e-039
Identities = 35/77 (45%), Positives = 38/77 (49%)
Frame = +2 / -2
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H G S HR S* PQ PS VL A V P P YP AP +VP
Sbjct: 403 VAVTVTVPGKHHWGSSLHRIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYPQAPPIVP 224
Query: 917 DPSRPP*KVAWAGFHGP 967
+ S PP* VAWA H P
Sbjct: 223 EASLPP*NVAWADSHPP 173
Score = 41.4 bits (84), Expect(3) = 1e-039
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +1 / -1
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
AELPV G N+ * +AG ER+ L+ EV LP L PVA H P
Sbjct: 824 AELPV*GSNII*NNCPAIAGCDLERKALSVEVRIALPVLSPVA*HGLP 681
>gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds
Length = 919
Score = 129 bits (277), Expect(3) = 3e-074
Identities = 47/75 (62%), Positives = 62/75 (82%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAFL+IA+ + GIVPI Y RV C ++GGIR+T+ G+ YFN+V ITNV
Sbjct: 299 WCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNV 478
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVS+KGS+
Sbjct: 479 GGAGDVHAVSIKGSR 523
Score = 118 bits (252), Expect(3) = 3e-074
Identities = 43/77 (55%), Positives = 50/77 (64%)
Frame = -1 / +2
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF DG +CG CYE+RC
Sbjct: 23 GGWESAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMRC 202
Query: 786 VDSPSGCKPDAAALVVT 736
D P C P + T
Sbjct: 203 NDDPQWCLPGTVTVTAT 253
Score = 90.4 bits (191), Expect(3) = 1e-039
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / -2
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
PF +TA SPAPPTLV+ T LKY +P V R+PP TL * +GT+P AI+R AG
Sbjct: 516 PFMETAWTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAG 337
Query: 668 MLRSKCSRGGLHH 706
SKC GGLHH
Sbjct: 336 SAISKCCSGGLHH 298
Score = 70.7 bits (148), Expect(3) = 1e-039
Identities = 35/77 (45%), Positives = 38/77 (49%)
Frame = +2 / -2
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H G S HR S* PQ PS VL A V P P YP AP +VP
Sbjct: 252 VAVTVTVPGKHHWGSSLHRIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYPQAPPIVP 73
Query: 917 DPSRPP*KVAWAGFHGP 967
+ S PP* VAWA H P
Sbjct: 72 EASLPP*NVAWADSHPP 22
Score = 70.7 bits (148), Expect(3) = 3e-074
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = -1 / +2
Query: 480 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
R W M RNWGQ WQ+ L +SL+F+V TSD R S +V P++W+FG T++ S+
Sbjct: 521 RSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
Score = 41.4 bits (84), Expect(3) = 1e-039
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +1 / -1
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
AELPV G N+ * +AG ER+ L+ EV LP L PVA H P
Sbjct: 673 AELPV*GSNII*NNCPAIAGCDLERKALSVEVRIALPVLSPVA*HGLP 530
>gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADO50 3' end, mRNA sequence
Length = 902
Score = 134 bits (287), Expect(4) = 5e-074
Identities = 51/75 (68%), Positives = 61/75 (81%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP EHFDLS P F IA+ +AGIVP+ YRRV C ++GGIR+TI G+ YFN+V ITNV
Sbjct: 410 WCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNV 589
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVSVKG+K
Sbjct: 590 GGAGDVEAVSVKGAK 634
Score = 110 bits (234), Expect(4) = 5e-074
Identities = 39/75 (52%), Positives = 49/75 (65%)
Frame = -1 / +2
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W AHATFYGG D +GT GACGY + +QGYG T A+ST LF +G +CG CYE++C D
Sbjct: 140 WTSAHATFYGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCND 319
Query: 780 SPSGCKPDAAALVVT 736
P C P + + T
Sbjct: 320 DPQWCLPGSIVVTAT 364
Score = 68.0 bits (142), Expect(4) = 5e-074
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
W M RNWGQ WQ+ L +SL+F+V TSD + TS++V ++W+FG T+ ++
Sbjct: 641 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTFAGNR 805
Score = 24.0 bits (46), Expect(4) = 5e-074
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 750 ALVVTVTDLCPPKD 709
++VVT T+ CPP +
Sbjct: 344 SIVVTATNFCPPNN 385
>gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_42_B01_A029 5', mRNA sequence
Length = 862
Score = 128 bits (274), Expect(4) = 5e-074
Identities = 47/75 (62%), Positives = 60/75 (80%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFDLS P F IA+ +AGIVP+ Y+RV C + GGIR+T+ G+ YFN+V ITNV
Sbjct: 418 WCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNV 597
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVS+KGS+
Sbjct: 598 GGAGDVHAVSIKGSR 642
Score = 110 bits (234), Expect(4) = 5e-074
Identities = 40/75 (53%), Positives = 48/75 (64%)
Frame = -1 / +1
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G +CG C+ +RC D
Sbjct: 148 WTNAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCND 327
Query: 780 SPSGCKPDAAALVVT 736
P C P A + T
Sbjct: 328 DPQWCLPGAIVVTAT 372
Score = 82.6 bits (174), Expect(3) = 6e-026
Identities = 41/74 (55%), Positives = 45/74 (60%)
Frame = +2 / -3
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L PF +TA SPAPPTLV+ T LKY P V R+PP TL GTMPA + AI
Sbjct: 641 LEPFMETAWTSPAPPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWK 462
Query: 662 AGMLRSKCSRGGLH 703
G RSKC RGGLH
Sbjct: 461 TGSERSKCWRGGLH 420
Score = 72.5 bits (152), Expect(4) = 5e-074
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = -1 / +1
Query: 480 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
R W M RNWGQ WQ+ L +SL+F+V TSD R TS++ P++W+FG T+ ++
Sbjct: 640 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPSNWQFGQTFAGAQ 813
Score = 41.8 bits (85), Expect(3) = 6e-026
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2 / -3
Query: 893 PHAPAVVPDPSRPP*KVAWA 952
PHAP +VP+ S PP*KVAWA
Sbjct: 215 PHAPPIVPEASPPP*KVAWA 156
Score = 35.9 bits (72), Expect(3) = 6e-026
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1 / -2
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
A+LPV+G + + VAG E + L EV LP L PVA H P
Sbjct: 792 AKLPVAGSGIVGSNSSPVAGGDLEGEALPVEVTVALPILAPVAGHWLP 649
Score = 25.4 bits (49), Expect(4) = 5e-074
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / +1
Query: 750 ALVVTVTDLCPPKD 709
A+VVT T+ CPP +
Sbjct: 352 AIVVTATNFCPPNN 393
>gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA338 5' end, mRNA sequence
Length = 817
Score = 134 bits (287), Expect(4) = 6e-074
Identities = 51/75 (68%), Positives = 61/75 (81%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP EHFDLS P F IA+ +AGIVP+ YRRV C ++GGIR+TI G+ YFN+V ITNV
Sbjct: 353 WCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNV 532
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVSVKG+K
Sbjct: 533 GGAGDVEAVSVKGAK 577
Score = 110 bits (235), Expect(4) = 6e-074
Identities = 39/75 (52%), Positives = 50/75 (66%)
Frame = -1 / +2
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W AHATFYGG D +GT GACGY + +QGYG T A+ST LF +G +CG CYE++C D
Sbjct: 83 WTSAHATFYGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCND 262
Query: 780 SPSGCKPDAAALVVT 736
P+ C P + + T
Sbjct: 263 DPAWCLPGSIVVTAT 307
Score = 67.0 bits (140), Expect(4) = 6e-074
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTY 319
W M RNWGQ WQ+ L +SL+F+V TSD + TS++V ++W+FG T+
Sbjct: 584 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTF 736
Score = 24.0 bits (46), Expect(4) = 6e-074
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 750 ALVVTVTDLCPPKD 709
++VVT T+ CPP +
Sbjct: 287 SIVVTATNFCPPNN 328
>gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAK45 5' end, mRNA sequence
Length = 778
Score = 134 bits (287), Expect(4) = 6e-074
Identities = 51/75 (68%), Positives = 61/75 (81%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP EHFDLS P F IA+ +AGIVP+ YRRV C ++GGIR+TI G+ YFN+V ITNV
Sbjct: 353 WCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNV 532
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVSVKG+K
Sbjct: 533 GGAGDVEAVSVKGAK 577
Score = 110 bits (235), Expect(4) = 6e-074
Identities = 39/75 (52%), Positives = 50/75 (66%)
Frame = -1 / +2
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W AHATFYGG D +GT GACGY + +QGYG T A+ST LF +G +CG CYE++C D
Sbjct: 83 WTSAHATFYGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCND 262
Query: 780 SPSGCKPDAAALVVT 736
P+ C P + + T
Sbjct: 263 DPAWCLPGSIVVTAT 307
Score = 67.0 bits (140), Expect(4) = 6e-074
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTY 319
W M RNWGQ WQ+ L +SL+F+V TSD + TS++V ++W+FG T+
Sbjct: 584 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTF 736
Score = 24.0 bits (46), Expect(4) = 6e-074
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 750 ALVVTVTDLCPPKD 709
++VVT T+ CPP +
Sbjct: 287 SIVVTATNFCPPNN 328
>gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_C05_A022 5', mRNA
sequence
Length = 765
Score = 134 bits (287), Expect(4) = 6e-074
Identities = 51/75 (68%), Positives = 61/75 (81%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP EHFDLS P F IA+ +AGIVP+ YRRV C ++GGIR+TI G+ YFN+V ITNV
Sbjct: 374 WCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNV 553
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVSVKG+K
Sbjct: 554 GGAGDVEAVSVKGAK 598
Score = 110 bits (235), Expect(4) = 6e-074
Identities = 39/75 (52%), Positives = 50/75 (66%)
Frame = -1 / +2
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W AHATFYGG D +GT GACGY + +QGYG T A+ST LF +G +CG CYE++C D
Sbjct: 104 WTSAHATFYGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCND 283
Query: 780 SPSGCKPDAAALVVT 736
P+ C P + + T
Sbjct: 284 DPAWCLPGSIVVTAT 328
Score = 67.0 bits (140), Expect(4) = 6e-074
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTY 319
W M RNWGQ WQ+ L +SL+F+V TSD + TS++V ++W+FG T+
Sbjct: 605 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTF 757
Score = 24.0 bits (46), Expect(4) = 6e-074
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 750 ALVVTVTDLCPPKD 709
++VVT T+ CPP +
Sbjct: 308 SIVVTATNFCPPNN 349
>gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 128 bits (275), Expect(3) = 1e-073
Identities = 47/74 (63%), Positives = 61/74 (82%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAFL+IA+ + GIVPI Y RV C ++GGIR+T+ G+ YFN+V ITNV
Sbjct: 299 WCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNV 478
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ AVS+KGS
Sbjct: 479 GGAGDVHAVSIKGS 520
Score = 118 bits (252), Expect(3) = 1e-073
Identities = 43/77 (55%), Positives = 50/77 (64%)
Frame = -1 / +2
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF DG +CG CYE+RC
Sbjct: 23 GGWESAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMRC 202
Query: 786 VDSPSGCKPDAAALVVT 736
D P C P + T
Sbjct: 203 NDDPQWCLPGTVTVTAT 253
Score = 90.4 bits (191), Expect(3) = 1e-039
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / -3
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
PF +TA SPAPPTLV+ T LKY +P V R+PP TL * +GT+P AI+R AG
Sbjct: 516 PFMETAWTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAG 337
Query: 668 MLRSKCSRGGLHH 706
SKC GGLHH
Sbjct: 336 SAISKCCSGGLHH 298
Score = 70.7 bits (148), Expect(3) = 1e-039
Identities = 35/77 (45%), Positives = 38/77 (49%)
Frame = +2 / -3
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H G S HR S* PQ PS VL A V P P YP AP +VP
Sbjct: 252 VAVTVTVPGKHHWGSSLHRIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYPQAPPIVP 73
Query: 917 DPSRPP*KVAWAGFHGP 967
+ S PP* VAWA H P
Sbjct: 72 EASLPP*NVAWADSHPP 22
Score = 69.8 bits (146), Expect(3) = 1e-073
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
W M RNWGQ WQ+ L +SL+F+V TSD R S +V P++W+FG T++ S+
Sbjct: 530 WQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTIVSNNVAPSNWQFGQTFEGSQ 694
Score = 41.4 bits (84), Expect(3) = 1e-039
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +1 / -2
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
AELPV G N+ * +AG ER+ L+ EV LP L PVA H P
Sbjct: 673 AELPV*GSNII*NNCPAIAGCDLERKALSVEVRIALPVLSPVA*HGLP 530
>gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds
Length = 891
Score = 129 bits (277), Expect(3) = 1e-073
Identities = 47/75 (62%), Positives = 62/75 (82%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAFL+IA+ + GIVPI Y RV C ++GGIR+T+ G+ YFN+V ITNV
Sbjct: 299 WCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNV 478
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVS+KGS+
Sbjct: 479 GGAGDVNAVSIKGSR 523
Score = 116 bits (248), Expect(3) = 1e-073
Identities = 42/77 (54%), Positives = 50/77 (64%)
Frame = -1 / +2
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF DG +CG CYE++C
Sbjct: 23 GGWESAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMQC 202
Query: 786 VDSPSGCKPDAAALVVT 736
D P C P + T
Sbjct: 203 NDDPQWCLPGTVTVTAT 253
Score = 91.3 bits (193), Expect(3) = 1e-037
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / -1
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
PF +TA SPAPPTLV+ T LKY +P V R+PP TL * +GT+P AI+R AG
Sbjct: 516 PFMETALTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAG 337
Query: 668 MLRSKCSRGGLHH 706
SKC GGLHH
Sbjct: 336 SAISKCCSGGLHH 298
Score = 70.7 bits (148), Expect(3) = 1e-073
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = -1 / +2
Query: 480 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
R W M RNWGQ WQ+ L +SL+F+V TSD R S +V P++W+FG T++ S+
Sbjct: 521 RSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
Score = 63.4 bits (132), Expect(3) = 1e-037
Identities = 33/77 (42%), Positives = 36/77 (46%)
Frame = +2 / -1
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H G S H S* PQ PS VL A V P P YP AP +VP
Sbjct: 252 VAVTVTVPGKHHWGSSLHCIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYPQAPPIVP 73
Query: 917 DPSRPP*KVAWAGFHGP 967
+ S PP* VAWA P
Sbjct: 72 EASLPP*NVAWADSQPP 22
Score = 40.9 bits (83), Expect(3) = 1e-037
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +1 / -3
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
AELPV G N+ * +AG ER+ L+ EV LP L PVA H P
Sbjct: 673 AELPV*GSNII*NDCTAIAGCDLERKALSVEVGVALPVLSPVA*HGLP 530
>gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_G12_A029 3', mRNA sequence
Length = 865
Score = 129 bits (277), Expect(3) = 2e-073
Identities = 46/74 (62%), Positives = 61/74 (82%)
Frame = -1 / -1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAF QIA ++GIVPI +RR+ C ++GG+R+TI G+ YFN+V ITNV
Sbjct: 418 WCNPPLQHFDMAQPAFQQIAIYRSGIVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNV 239
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ AVS+KGS
Sbjct: 238 GGAGDVEAVSIKGS 197
Score = 114 bits (244), Expect(3) = 2e-073
Identities = 43/82 (52%), Positives = 52/82 (63%)
Frame = -1 / -1
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G CG CYE++C D
Sbjct: 694 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKCND 515
Query: 780 SPSGCKPDAAALVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 514 QSDSQWCLPGTVTVTATNLCPP 449
Score = 84.5 bits (178), Expect(2) = 2e-028
Identities = 40/75 (53%), Positives = 45/75 (60%)
Frame = +2 / +3
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +TA+ SPAPPTLV+ T LK P++V R PP H L IGTMP AI
Sbjct: 195 LEPLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIC*K 374
Query: 662 AGMLRSKCSRGGLHH 706
AG SKC RGGLHH
Sbjct: 375 AGCAMSKCWRGGLHH 419
Score = 71.6 bits (150), Expect(3) = 2e-073
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = -1 / -1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQ 316
W M RNWGQ WQ+ L ++L+F+V TSD R TS++V PA+W+FG T++
Sbjct: 187 WQTMSRNWGQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANWQFGQTFE 32
Score = 62.0 bits (129), Expect(2) = 2e-028
Identities = 30/57 (52%), Positives = 31/57 (54%)
Frame = +2 / +3
Query: 782 STHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 952
S H S* PQ P S VL A V PYP YPHAP +VPD S PP* VA A
Sbjct: 516 SLHFIS*QAPQVAPLLKSAVLRAAVFVPYPWLYKLPYPHAPPIVPDASLPP*NVACA 686
>gb|DR011619.1|DR011619 HEAT1_6_G09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_6_G09_A029 5', mRNA sequence
Length = 783
Score = 138 bits (295), Expect(3) = 2e-073
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = -1 / +3
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + GPW AHATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C
Sbjct: 162 GVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGAC 341
Query: 801 YEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
+E++CV+ P C P +++VT T+ CPP
Sbjct: 342 FEIKCVNDPEWCHPGNPSILVTATNFCPP 428
Score = 135 bits (290), Expect(3) = 2e-073
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 459 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 638
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 639 AGAGDLVRVSVKGSQ 683
Score = 93.2 bits (197), Expect(2) = 2e-035
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -3
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 679 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 500
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 499 GMERSKWGRGGLH 461
Score = 77.1 bits (162), Expect(2) = 2e-035
Identities = 40/85 (47%), Positives = 43/85 (50%)
Frame = +2 / -3
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 430 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 251
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P AP +VP+ S PP*KVA A F GP
Sbjct: 250 PQAPPMVPEASLPP*KVACASFQGP 176
Score = 41.8 bits (85), Expect(3) = 2e-073
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSD 379
W + RNWGQ WQ L +SL+FR+ SD
Sbjct: 690 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSD 782
>gb|DR024833.1|DR024833 STRS1_67_F03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_67_F03_A034 5', mRNA sequence
Length = 778
Score = 138 bits (295), Expect(3) = 2e-073
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = -1 / +1
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + GPW AHATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C
Sbjct: 157 GVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGAC 336
Query: 801 YEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
+E++CV+ P C P +++VT T+ CPP
Sbjct: 337 FEIKCVNDPEWCHPGNPSILVTATNFCPP 423
Score = 135 bits (290), Expect(3) = 2e-073
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 454 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 633
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 634 AGAGDLVRVSVKGSQ 678
Score = 93.2 bits (197), Expect(2) = 2e-035
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -3
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 674 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 495
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 494 GMERSKWGRGGLH 456
Score = 77.1 bits (162), Expect(2) = 2e-035
Identities = 40/85 (47%), Positives = 43/85 (50%)
Frame = +2 / -3
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 425 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 246
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P AP +VP+ S PP*KVA A F GP
Sbjct: 245 PQAPPMVPEASLPP*KVACASFQGP 171
Score = 41.8 bits (85), Expect(3) = 2e-073
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSD 379
W + RNWGQ WQ L +SL+FR+ SD
Sbjct: 685 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSD 777
>gb|CF668487.1|CF668487 RTCNT1_36_F12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_F12_A029 5', mRNA sequence
Length = 755
Score = 138 bits (295), Expect(3) = 2e-073
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = -1 / +1
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + GPW AHATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C
Sbjct: 133 GVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGAC 312
Query: 801 YEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
+E++CV+ P C P +++VT T+ CPP
Sbjct: 313 FEIKCVNDPEWCHPGNPSILVTATNFCPP 399
Score = 135 bits (290), Expect(3) = 2e-073
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 430 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 609
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 610 AGAGDLVRVSVKGSQ 654
Score = 93.2 bits (197), Expect(2) = 2e-035
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -1
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 650 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 471
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 470 GMERSKWGRGGLH 432
Score = 77.1 bits (162), Expect(2) = 2e-035
Identities = 40/85 (47%), Positives = 43/85 (50%)
Frame = +2 / -1
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 401 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 222
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P AP +VP+ S PP*KVA A F GP
Sbjct: 221 PQAPPMVPEASLPP*KVACASFQGP 147
Score = 41.8 bits (85), Expect(3) = 2e-073
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSD 379
W + RNWGQ WQ L +SL+FR+ SD
Sbjct: 661 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSD 753
>gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_9_E12_A029 5', mRNA sequence
Length = 812
Score = 128 bits (274), Expect(4) = 4e-073
Identities = 47/75 (62%), Positives = 60/75 (80%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFDLS P F IA+ +AGIVP+ Y+RV C + GGIR+T+ G+ YFN+V ITNV
Sbjct: 435 WCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNV 614
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVS+KGS+
Sbjct: 615 GGAGDVHAVSIKGSR 659
Score = 110 bits (234), Expect(4) = 4e-073
Identities = 40/75 (53%), Positives = 48/75 (64%)
Frame = -1 / +3
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G +CG C+ +RC D
Sbjct: 165 WTNAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCND 344
Query: 780 SPSGCKPDAAALVVT 736
P C P A + T
Sbjct: 345 DPQWCLPGAIVVTAT 389
Score = 82.6 bits (174), Expect(3) = 5e-026
Identities = 41/74 (55%), Positives = 45/74 (60%)
Frame = +2 / -2
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L PF +TA SPAPPTLV+ T LKY P V R+PP TL GTMPA + AI
Sbjct: 658 LEPFMETAWTSPAPPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWK 479
Query: 662 AGMLRSKCSRGGLH 703
G RSKC RGGLH
Sbjct: 478 TGSERSKCWRGGLH 437
Score = 69.3 bits (145), Expect(4) = 4e-073
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = -1 / +3
Query: 480 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFG 328
R W M RNWGQ WQ+ L +SL+F+V TSD R TS++ P++W+FG
Sbjct: 657 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPSNWQFG 809
Score = 41.8 bits (85), Expect(3) = 5e-026
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2 / -2
Query: 893 PHAPAVVPDPSRPP*KVAWA 952
PHAP +VP+ S PP*KVAWA
Sbjct: 232 PHAPPIVPEASPPP*KVAWA 173
Score = 35.9 bits (72), Expect(3) = 5e-026
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1 / -1
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
A+LPV+G + + VAG E + L EV LP L PVA H P
Sbjct: 809 AKLPVAGSGIVGSNSSPVAGGDLEGEALPVEVTVALPILAPVAGHWLP 666
Score = 25.4 bits (49), Expect(4) = 4e-073
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / +3
Query: 750 ALVVTVTDLCPPKD 709
A+VVT T+ CPP +
Sbjct: 369 AIVVTATNFCPPNN 410
>gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_31_H02_A029 5', mRNA sequence
Length = 857
Score = 127 bits (273), Expect(3) = 6e-073
Identities = 45/74 (60%), Positives = 61/74 (82%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAF +IA ++GIVPI +RR+ C ++GG+R+TI G+ YFN+V ITNV
Sbjct: 442 WCNPPLQHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNV 621
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ AVS+KGS
Sbjct: 622 GGAGDVEAVSIKGS 663
Score = 114 bits (244), Expect(3) = 6e-073
Identities = 43/82 (52%), Positives = 52/82 (63%)
Frame = -1 / +1
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G CG CYE++C D
Sbjct: 166 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKCND 345
Query: 780 SPSGCKPDAAALVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 346 QSDSQWCLPGTVTVTATNLCPP 411
Score = 85.8 bits (181), Expect(2) = 2e-027
Identities = 40/75 (53%), Positives = 46/75 (61%)
Frame = +2 / -1
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +TA+ SPAPPTLV+ T LK P++V R PP H L IGTMP AI+
Sbjct: 665 LEPLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*K 486
Query: 662 AGMLRSKCSRGGLHH 706
AG SKC RGGLHH
Sbjct: 485 AGCAMSKCWRGGLHH 441
Score = 71.6 bits (150), Expect(3) = 6e-073
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQ 316
W M RNWGQ WQ+ L ++L+F+V TSD R TS++V PA+W+FG T++
Sbjct: 673 WQTMSRNWGQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANWQFGQTFE 828
Score = 57.0 bits (118), Expect(2) = 2e-027
Identities = 29/57 (50%), Positives = 30/57 (52%)
Frame = +2 / -1
Query: 782 STHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 952
S H S* PQ P S VL A V P P YPHAP +VPD S PP* VA A
Sbjct: 344 SLHFIS*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPHAPPIVPDASLPP*NVACA 174
>gb|DR019211.1|DR019211 STRS1_28_B06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_B06_A034 5', mRNA sequence
Length = 869
Score = 131 bits (281), Expect(4) = 1e-072
Identities = 50/79 (63%), Positives = 61/79 (77%)
Frame = -1 / +1
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
P WC PP HFDLS P FL+IA+ KAG+VPI YRRV C K+GGIR+TI G+ YFN+V
Sbjct: 397 PPGGWCNPPLRHFDLSQPVFLKIAKYKAGVVPILYRRVPCHKKGGIRFTINGHSYFNLVL 576
Query: 537 ITNVGGAGDIAAVSVKGSK 481
I+NVGGAGD+ V +KGS+
Sbjct: 577 ISNVGGAGDVHGVWIKGSR 633
Score = 105 bits (225), Expect(4) = 1e-072
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -1 / +1
Query: 969 AGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVR 790
A W AHATFYGG D SGT +GACGY + +QGYG T A+ST LF +G +CG C++V
Sbjct: 154 ASSWISAHATFYGGSDASGTMSGACGYGNLYSQGYGANTAALSTALFNNGLSCGACFQVM 333
Query: 789 CVDSPSGCKPDAAALVVT 736
C D P C + + T
Sbjct: 334 CNDDPQWCLRGSVVVTAT 387
Score = 89.0 bits (188), Expect(3) = 1e-031
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +2 / -1
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
PF T SPAPPTL+I T LKY +P++V R+PP T ++GT PA AI++N G
Sbjct: 626 PFIQTPWTSPAPPTLLISTRLKYEWPLIVNRIPPFL*QGTRLYKMGTTPALYLAIFKNTG 447
Query: 668 MLRSKCSRGGLHH 706
RSKC +GGLHH
Sbjct: 446 CERSKCRKGGLHH 408
Score = 71.2 bits (149), Expect(4) = 1e-072
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = -1 / +1
Query: 480 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
R W M RNWGQ WQ+ L +SL+F+V TSD R TS++V +W+FG T+ ++
Sbjct: 631 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRSVTSYNVASVNWQFGQTFSGAQ 804
Score = 51.5 bits (106), Expect(3) = 1e-031
Identities = 28/62 (45%), Positives = 30/62 (48%)
Frame = +2 / -1
Query: 767 HPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVA 946
H G S H T PQ P VL A V P P YP AP +VP+ S PP*KVA
Sbjct: 356 HHCGSSLHMT*KQAPQLRPLLKRAVLRAAVLAP*PWLYRFPYPQAPLIVPEASLPP*KVA 177
Query: 947 WA 952
A
Sbjct: 176 CA 171
Score = 34.5 bits (69), Expect(3) = 1e-031
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +2 / -1
Query: 329 PNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFI 463
PN Q T +EV L SLV+T +R +C CPQLR I
Sbjct: 782 PNCQFTEATLYEVTLLPSLVVTLKERLWPLR*ELLCQFCPQLRDI 648
Score = 23.1 bits (44), Expect(4) = 1e-072
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1 / +1
Query: 750 ALVVTVTDLCPP 715
++VVT T+ CPP
Sbjct: 367 SVVVTATNFCPP 402
>gb|DR099166.1|DR099166 STRR1_53_C12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_53_C12_A033 5', mRNA sequence
Length = 823
Score = 135 bits (290), Expect(3) = 1e-072
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 246 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 425
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 426 AGAGDLVRVSVKGSQ 470
Score = 104 bits (222), Expect(3) = 1e-072
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = -1 / +3
Query: 924 DGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSGCKPDAAAL 745
D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C+E++CV+ P C P ++
Sbjct: 6 DASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPGNPSI 185
Query: 744 VVTVTDLCPP 715
+VT T+ CPP
Sbjct: 186 LVTATNFCPP 215
Score = 93.2 bits (197), Expect(3) = 7e-032
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -1
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 466 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 287
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 286 GMERSKWGRGGLH 248
Score = 73.0 bits (153), Expect(3) = 1e-072
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
W + RNWGQ WQ L +SL+FR+ SD R +TSW+++P +W+FG T+ +
Sbjct: 477 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQ 641
Score = 55.6 bits (115), Expect(3) = 7e-032
Identities = 30/71 (42%), Positives = 33/71 (46%)
Frame = +2 / -1
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 217 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 38
Query: 893 PHAPAVVPDPS 925
P AP +VP+ S
Sbjct: 37 PQAPPMVPEAS 5
Score = 27.2 bits (53), Expect(3) = 7e-032
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1 / -3
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
A+LP+ NVP G V + E + L + LP L PV+ P
Sbjct: 620 AKLPIWRHNVPGCGGPAVTASYSEGEALPDQNGAALPILAPVSGQWNP 477
>gb|CF386013.1|CF386013 RTDR1_7_F11.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_7_F11_A015 5', mRNA
sequence
Length = 773
Score = 138 bits (295), Expect(3) = 2e-072
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = -1 / +1
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + GPW AHATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C
Sbjct: 151 GVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGAC 330
Query: 801 YEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
+E++CV+ P C P +++VT T+ CPP
Sbjct: 331 FEIKCVNDPEWCHPGNPSILVTATNFCPP 417
Score = 132 bits (283), Expect(3) = 2e-072
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 448 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 627
Query: 525 GGAGDIAAVSVKGSK 481
GA D+ VSVKGS+
Sbjct: 628 AGAXDLVRVSVKGSQ 672
Score = 89.0 bits (188), Expect(2) = 3e-034
Identities = 42/73 (57%), Positives = 45/73 (61%)
Frame = +2 / -1
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T S AP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 668 LPFTLTLTKSXAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 489
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 488 GMERSKWGRGGLH 450
Score = 77.1 bits (162), Expect(2) = 3e-034
Identities = 40/85 (47%), Positives = 43/85 (50%)
Frame = +2 / -1
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 419 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 240
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P AP +VP+ S PP*KVA A F GP
Sbjct: 239 PQAPPMVPEASLPP*KVACASFQGP 165
Score = 41.8 bits (85), Expect(3) = 2e-072
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSD 379
W + RNWGQ WQ L +SL+FR+ SD
Sbjct: 679 WIPLSRNWGQNWQCSTVLVGQSLSFRITGSD 771
>gb|CO171305.1|CO171305 NDL1_20_C09.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_20_C09_A029 5', mRNA sequence
Length = 776
Score = 128 bits (275), Expect(4) = 5e-072
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPREHFD++MPAF QI KAGIVPI Y+RVAC K+GG+R+TI GN YF ++ +TNV
Sbjct: 394 WCNPPREHFDMAMPAFEQIGIWKAGIVPIQYKRVACVKEGGMRFTINGNYYFYLILVTNV 573
Query: 525 GGAGDIAAVSVKGS 484
GG G +A V VKGS
Sbjct: 574 GGDGVVADVKVKGS 615
Score = 88.1 bits (186), Expect(3) = 1e-027
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / -1
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
PFT T+A +P+PPT V K P+MV +PP F ATL IGT+PAF I NAG
Sbjct: 611 PFTFTSATTPSPPTFVTRMR*K**LPLMVNLIPPSFTQATLLYWIGTIPAFQMPICSNAG 432
Query: 668 MLRSKCSRGGLHH 706
+ SKCSRGGLHH
Sbjct: 431 IAMSKCSRGGLHH 393
Score = 79.0 bits (166), Expect(4) = 5e-072
Identities = 30/49 (61%), Positives = 34/49 (69%)
Frame = -1 / +2
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDG 820
G W AHATFYGG D +GT AGACGY + +QGYG T A+ST LF G
Sbjct: 113 GGWNYAHATFYGGADAAGTMAGACGYGNLYSQGYGTNTAALSTALFNSG 259
Score = 64.3 bits (134), Expect(4) = 5e-072
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVT 322
W + RNWGQ WQ+ L ++L+F+V +S R TS++V P+DW+FG T
Sbjct: 625 WLPLTRNWGQNWQSNSILKGQALSFQVTSSGGRTVTSYNVAPSDWQFGQT 774
Score = 57.4 bits (119), Expect(4) = 5e-072
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = -1 / +1
Query: 816 ACGGCYEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
+CG C+E++CVD P C P + ++V+T T+ CPP
Sbjct: 262 SCGACFEIKCVDDPQWCLPGSPSIVITATNFCPP 363
Score = 39.1 bits (79), Expect(3) = 1e-027
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +2 / -3
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P APA+VP S PP*KVA A FH P
Sbjct: 186 PQAPAIVPAASAPP*KVA*A*FHPP 112
Score = 34.1 bits (68), Expect(3) = 1e-027
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2 / -1
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQ 814
LGG + V V T G H G STH S H PQ
Sbjct: 365 LGGQKLVAVMTIEGLPGRHHCGSSTHFISKHAPQ 264
>gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 123 bits (263), Expect(3) = 6e-072
Identities = 45/75 (60%), Positives = 60/75 (80%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAFL+IA+ + GIVPI Y RV C ++GGIR+T+ G+ FN+V ITNV
Sbjct: 299 WCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLRKGGIRFTVNGHSCFNLVLITNV 478
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVS+KG +
Sbjct: 479 GGAGDVHAVSIKGPR 523
Score = 116 bits (249), Expect(3) = 6e-072
Identities = 42/77 (54%), Positives = 50/77 (64%)
Frame = -1 / +2
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF DG +CG CYE++C
Sbjct: 23 GGWESAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMQC 202
Query: 786 VDSPSGCKPDAAALVVT 736
D P C P + T
Sbjct: 203 NDDPQWCLPGTVTITAT 253
Score = 87.7 bits (185), Expect(3) = 2e-037
Identities = 39/73 (53%), Positives = 47/73 (64%)
Frame = +2 / -3
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
PF +TA SPAPPTLV+ T LK+ +P V R+PP TL * +GT+P AI+R AG
Sbjct: 516 PFMETA*TSPAPPTLVMSTRLKHEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAG 337
Query: 668 MLRSKCSRGGLHH 706
SKC GGLHH
Sbjct: 336 SAISKCCSGGLHH 298
Score = 70.7 bits (148), Expect(3) = 6e-072
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = -1 / +2
Query: 480 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
R W M RNWGQ WQ+ L +SL+F+V TSD R S +V P++W+FG T++ S+
Sbjct: 521 RSGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
Score = 65.7 bits (137), Expect(3) = 2e-037
Identities = 34/77 (44%), Positives = 36/77 (46%)
Frame = +2 / -3
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V G H G S H S* PQ PS VL A V P P YP AP +VP
Sbjct: 252 VAVIVTVPGKHHWGSSLHCIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYPQAPPIVP 73
Query: 917 DPSRPP*KVAWAGFHGP 967
+ S PP* VAWA H P
Sbjct: 72 EASLPP*NVAWADSHPP 22
Score = 41.4 bits (84), Expect(3) = 2e-037
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +1 / -2
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
AELPV G N+ * +AG ER+ L+ EV LP L PVA H P
Sbjct: 673 AELPV*GSNII*NNCPAIAGCDLERKALSVEVRIALPVLSPVA*HGLP 530
>gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_38_A01_A029 5', mRNA sequence
Length = 765
Score = 128 bits (274), Expect(4) = 7e-072
Identities = 47/75 (62%), Positives = 60/75 (80%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFDLS P F IA+ +AGIVP+ Y+RV C + GGIR+T+ G+ YFN+V ITNV
Sbjct: 394 WCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNV 573
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVS+KGS+
Sbjct: 574 GGAGDVHAVSIKGSR 618
Score = 110 bits (234), Expect(4) = 7e-072
Identities = 40/75 (53%), Positives = 48/75 (64%)
Frame = -1 / +1
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G +CG C+ +RC D
Sbjct: 124 WTNAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCND 303
Query: 780 SPSGCKPDAAALVVT 736
P C P A + T
Sbjct: 304 DPQWCLPGAIVVTAT 348
Score = 82.6 bits (174), Expect(3) = 4e-025
Identities = 41/74 (55%), Positives = 45/74 (60%)
Frame = +2 / -2
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L PF +TA SPAPPTLV+ T LKY P V R+PP TL GTMPA + AI
Sbjct: 617 LEPFMETAWTSPAPPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWK 438
Query: 662 AGMLRSKCSRGGLH 703
G RSKC RGGLH
Sbjct: 437 TGSERSKCWRGGLH 396
Score = 65.2 bits (136), Expect(4) = 7e-072
Identities = 24/50 (48%), Positives = 32/50 (64%)
Frame = -1 / +1
Query: 480 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKF 331
R W M RNWGQ WQ+ L +SL+F+V TSD R TS++ P +W+F
Sbjct: 616 RTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPNNWQF 765
Score = 41.8 bits (85), Expect(3) = 4e-025
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2 / -2
Query: 893 PHAPAVVPDPSRPP*KVAWA 952
PHAP +VP+ S PP*KVAWA
Sbjct: 191 PHAPPIVPEASPPP*KVAWA 132
Score = 32.7 bits (65), Expect(3) = 4e-025
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +1 / -1
Query: 331 ELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
+LPV G + + VAG E + L EV LP L PVA H P
Sbjct: 765 KLPVVGSGIVGSNSSPVAGGDLEGEALPVEVTVALPILAPVAGHWLP 625
Score = 25.4 bits (49), Expect(4) = 7e-072
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / +1
Query: 750 ALVVTVTDLCPPKD 709
A+VVT T+ CPP +
Sbjct: 328 AIVVTATNFCPPNN 369
>gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_1_F12_A029 5', mRNA sequence
Length = 733
Score = 128 bits (275), Expect(3) = 1e-071
Identities = 48/75 (64%), Positives = 62/75 (82%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAF +IA+ K+GIVPI YRRV C ++GGIR+TI G+ YFN+V I+NV
Sbjct: 356 WCNPPLQHFDMAEPAFEKIAKYKSGIVPILYRRVPCLRKGGIRFTIAGHSYFNLVLISNV 535
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVS+K SK
Sbjct: 536 GGAGDVQAVSIKSSK 580
Score = 114 bits (243), Expect(3) = 1e-071
Identities = 41/77 (53%), Positives = 50/77 (64%)
Frame = -1 / +2
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G +CG CYE++C
Sbjct: 80 GGWESAHATFYGGSDASGTMGGACGYGNLYSQGYGTDTAALSTALFNNGFSCGACYEMKC 259
Query: 786 VDSPSGCKPDAAALVVT 736
D P C P + T
Sbjct: 260 NDDPQWCLPGTVRITAT 310
Score = 90.4 bits (191), Expect(2) = 4e-029
Identities = 39/72 (54%), Positives = 46/72 (63%)
Frame = +2 / -2
Query: 491 FTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAGM 670
F +TA SPAPPTL + T LKY +P +V R+PP H TL * IGT+P AI+ AG
Sbjct: 570 FIETAWTSPAPPTLEMSTRLKYEWPAIVKRIPPFLKHGTLL*RIGTIPLLYLAIFSKAGS 391
Query: 671 LRSKCSRGGLHH 706
SKC GGLHH
Sbjct: 390 AMSKCCNGGLHH 355
Score = 67.0 bits (140), Expect(3) = 1e-071
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = -1 / +2
Query: 486 SKRVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFG 328
S + W M RNWGQ WQ+ L +SL+F+V TSD R S++ P++W+FG
Sbjct: 572 SSKTGWQPMSRNWGQNWQSNSLLNGQSLSFKVTTSDGRTTVSYNTAPSNWQFG 730
Score = 58.3 bits (121), Expect(2) = 4e-029
Identities = 32/69 (46%), Positives = 34/69 (49%)
Frame = +2 / -2
Query: 761 GLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*K 940
G H G S H S* PQ P N VL+A V P P YP AP +VPD S PP*
Sbjct: 285 GKHHWGSSLHFIS*QAPQLNPLLNRAVLSAAVSVP*PWLYRFPYPQAPPIVPDASLPP*N 106
Query: 941 VAWAGFHGP 967
VA A P
Sbjct: 105 VA*ADSQPP 79
>gb|DR080162.1|DR080162 RTFEPL1_20_E11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_20_E11_A029 5', mRNA sequence
Length = 740
Score = 138 bits (295), Expect(3) = 3e-071
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = -1 / +3
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + GPW AHATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C
Sbjct: 138 GVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGAC 317
Query: 801 YEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
+E++CV+ P C P +++VT T+ CPP
Sbjct: 318 FEIKCVNDPEWCHPGNPSILVTATNFCPP 404
Score = 135 bits (290), Expect(3) = 3e-071
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 435 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 614
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 615 AGAGDLVRVSVKGSQ 659
Score = 93.2 bits (197), Expect(2) = 2e-035
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -2
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 655 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 476
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 475 GMERSKWGRGGLH 437
Score = 77.1 bits (162), Expect(2) = 2e-035
Identities = 40/85 (47%), Positives = 43/85 (50%)
Frame = +2 / -2
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 406 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 227
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P AP +VP+ S PP*KVA A F GP
Sbjct: 226 PQAPPMVPEASLPP*KVACASFQGP 152
Score = 35.0 bits (70), Expect(3) = 3e-071
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTF 397
W + RNWGQ WQ L +SL+F
Sbjct: 666 WIPLSRNWGQNWQCSTVLVGQSLSF 740
>gb|DT633920.1|DT633920 EST1148851 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG023 3' end, mRNA sequence
Length = 903
Score = 152 bits (327), Expect(4) = 5e-071
Identities = 60/93 (64%), Positives = 69/93 (74%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP HFD++MPAF QIA+ K GIVP+ YRRV CAK GGIR+TI G +YF MV +TNV
Sbjct: 514 WCNPPLRHFDMAMPAFEQIAKVKGGIVPVRYRRVYCAKNGGIRFTINGQRYFIMVMVTNV 693
Query: 525 GGAGDIAAVSVKGSKRVKWTEMKRNWGQVWQTG 427
G AGD+ +VSVK S W MKRN GQ WQTG
Sbjct: 694 GRAGDVISVSVKASNSDLWEPMKRN*GQNWQTG 792
Score = 113 bits (241), Expect(4) = 5e-071
Identities = 41/58 (70%), Positives = 45/58 (77%)
Frame = -1 / +1
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
WK AHATFYGG D SGT GACGY D +QGYG TVA+ST LF DG +CGGCYE+RC
Sbjct: 235 WKHAHATFYGGSDASGTLGGACGYGDLYSQGYGTNTVALSTALFNDGLSCGGCYEIRC 408
Score = 101 bits (216), Expect(3) = 1e-038
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +2 / -2
Query: 428 PVCHTCPQLRFISVHLTRLLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHAT 607
PVC P LRFI H + L TDT SPA PTLV +T++K P +V R+PP FA T
Sbjct: 791 PVCQFWP*LRFIGSHRSELEALTDTEITSPALPTLVTITIMK*RCPFIVNRIPPFFAQYT 612
Query: 608 LR*EIGTMPAFSCAIWRNAGMLRSKCSRGGLHH 706
L * GT+P + AI AGM SK RGGLHH
Sbjct: 611 LL*RTGTIPPLTLAICSKAGMAMSKWRRGGLHH 513
Score = 72.1 bits (151), Expect(3) = 1e-038
Identities = 35/58 (60%), Positives = 37/58 (63%)
Frame = +2 / -2
Query: 788 HRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWAGFH 961
HR S*HPPQ PS N+ VL ATV P P S YP AP VP+ S PP*KVA A FH
Sbjct: 407 HRIS*HPPQLNPSLNNAVLRATVFVP*PWLYKSPYPQAPPNVPEASDPP*KVA*ACFH 234
Score = 37.3 bits (75), Expect(4) = 5e-071
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1 / +1
Query: 420 LTCESLTFRVMTSDHRKATSWHVLPADWKFGVTY 319
L +SL+F V TSD A S V P +W+FG T+
Sbjct: 802 LVGQSLSFSVTTSDGNTAISPEVAPPNWQFGQTF 903
Score = 24.9 bits (48), Expect(3) = 1e-038
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3 / -3
Query: 330 RTSSQRGERAMRWPCGGRW 386
RT+S G +WPC RW
Sbjct: 892 RTAS*EGLLQGKWPCCHRW 836
Score = 23.1 bits (44), Expect(4) = 5e-071
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1 / +1
Query: 750 ALVVTVTDLCPP 715
++VVT T+ CPP
Sbjct: 448 SVVVTATNFCPP 483
>gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_G09_A033 5', mRNA sequence
Length = 853
Score = 130 bits (279), Expect(4) = 6e-071
Identities = 47/74 (63%), Positives = 61/74 (82%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAF Q+A ++GIVPI +RRV C ++GG+R+TI GN YFN+V ITNV
Sbjct: 403 WCNPPLQHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNV 582
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ AVS+KGS
Sbjct: 583 GGAGDVEAVSIKGS 624
Score = 100 bits (213), Expect(4) = 6e-071
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = -1 / +1
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G CG CY+++C D
Sbjct: 127 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKCND 306
Score = 86.3 bits (182), Expect(2) = 2e-026
Identities = 41/75 (54%), Positives = 46/75 (61%)
Frame = +2 / -3
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +TA+ SPAPPTLV+ T LK FP++V R PP H TL IGTMP A
Sbjct: 626 LEPLMETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIASC*K 447
Query: 662 AGMLRSKCSRGGLHH 706
AG SKC RGGLHH
Sbjct: 446 AG*AMSKCWRGGLHH 402
Score = 72.1 bits (151), Expect(4) = 6e-071
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQ 316
W M RNWGQ WQ+ L +SL+F+V TSD R TS++ PA+W+FG T++
Sbjct: 634 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 789
Score = 53.8 bits (111), Expect(2) = 2e-026
Identities = 28/57 (49%), Positives = 29/57 (50%)
Frame = +2 / -3
Query: 782 STHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 952
S H * PQ P S VL A V P P YPHAP +VPD S PP* VA A
Sbjct: 305 SLHFIW*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPHAPPIVPDASLPP*NVACA 135
Score = 22.6 bits (43), Expect(4) = 6e-071
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / +1
Query: 747 LVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 340 VTVTATNLCPP 372
>gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_F09_A034 3', mRNA sequence
Length = 848
Score = 130 bits (279), Expect(4) = 6e-071
Identities = 47/74 (63%), Positives = 61/74 (82%)
Frame = -1 / -3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAF Q+A ++GIVPI +RRV C ++GG+R+TI GN YFN+V ITNV
Sbjct: 429 WCNPPLQHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNV 250
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ AVS+KGS
Sbjct: 249 GGAGDVEAVSIKGS 208
Score = 100 bits (213), Expect(4) = 6e-071
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = -1 / -3
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G CG CY+++C D
Sbjct: 705 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKCND 526
Score = 86.3 bits (182), Expect(2) = 2e-026
Identities = 41/75 (54%), Positives = 46/75 (61%)
Frame = +2 / +2
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +TA+ SPAPPTLV+ T LK FP++V R PP H TL IGTMP A
Sbjct: 206 LEPLMETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIASC*K 385
Query: 662 AGMLRSKCSRGGLHH 706
AG SKC RGGLHH
Sbjct: 386 AG*AMSKCWRGGLHH 430
Score = 72.1 bits (151), Expect(4) = 6e-071
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = -1 / -3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQ 316
W M RNWGQ WQ+ L +SL+F+V TSD R TS++ PA+W+FG T++
Sbjct: 198 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 43
Score = 53.8 bits (111), Expect(2) = 2e-026
Identities = 28/57 (49%), Positives = 29/57 (50%)
Frame = +2 / +2
Query: 782 STHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 952
S H * PQ P S VL A V P P YPHAP +VPD S PP* VA A
Sbjct: 527 SLHFIW*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPHAPPIVPDASLPP*NVACA 697
Score = 22.6 bits (43), Expect(4) = 6e-071
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 747 LVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 492 VTVTATNLCPP 460
>gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_A08_A015 5', mRNA sequence
Length = 751
Score = 129 bits (277), Expect(4) = 1e-070
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAF Q A ++GIVPI +RRV C ++GG+R+TI GN YFN+V ITNV
Sbjct: 318 WCNPPLQHFDMAQPAFQQFAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNV 497
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ AVS+KGS
Sbjct: 498 GGAGDVEAVSIKGS 539
Score = 100 bits (213), Expect(4) = 1e-070
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = -1 / +3
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G CG CY+++C D
Sbjct: 42 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKCND 221
Score = 85.8 bits (181), Expect(2) = 2e-026
Identities = 41/75 (54%), Positives = 46/75 (61%)
Frame = +2 / -1
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +TA+ SPAPPTLV+ T LK FP++V R PP H TL IGTMP A
Sbjct: 541 LEPLMETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIANC*K 362
Query: 662 AGMLRSKCSRGGLHH 706
AG SKC RGGLHH
Sbjct: 361 AG*AMSKCWRGGLHH 317
Score = 72.1 bits (151), Expect(4) = 1e-070
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQ 316
W M RNWGQ WQ+ L +SL+F+V TSD R TS++ PA+W+FG T++
Sbjct: 549 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 704
Score = 53.8 bits (111), Expect(2) = 2e-026
Identities = 28/57 (49%), Positives = 29/57 (50%)
Frame = +2 / -1
Query: 782 STHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 952
S H * PQ P S VL A V P P YPHAP +VPD S PP* VA A
Sbjct: 220 SLHFIW*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPHAPPIVPDASLPP*NVACA 50
Score = 22.6 bits (43), Expect(4) = 1e-070
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / +3
Query: 747 LVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 255 VTVTATNLCPP 287
>gb|CO367487.1|CO367487 RTK1_34_D03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_34_D03_A029 5', mRNA sequence
Length = 788
Score = 127 bits (273), Expect(3) = 3e-070
Identities = 45/74 (60%), Positives = 61/74 (82%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAF +IA ++GIVPI +RR+ C ++GG+R+TI G+ YFN+V ITNV
Sbjct: 418 WCNPPLQHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNV 597
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ AVS+KGS
Sbjct: 598 GGAGDVEAVSIKGS 639
Score = 114 bits (244), Expect(3) = 3e-070
Identities = 43/82 (52%), Positives = 52/82 (63%)
Frame = -1 / +1
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G CG CYE++C D
Sbjct: 142 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKCND 321
Query: 780 SPSGCKPDAAALVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 322 QSDSQWCLPGTVTVTATNLCPP 387
Score = 85.8 bits (181), Expect(2) = 2e-027
Identities = 40/75 (53%), Positives = 46/75 (61%)
Frame = +2 / -1
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +TA+ SPAPPTLV+ T LK P++V R PP H L IGTMP AI+
Sbjct: 641 LEPLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*K 462
Query: 662 AGMLRSKCSRGGLHH 706
AG SKC RGGLHH
Sbjct: 461 AGCAMSKCWRGGLHH 417
Score = 62.5 bits (130), Expect(3) = 3e-070
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWK 334
W M RNWGQ WQ+ L ++L+F+V TSD R TS++V PA+W+
Sbjct: 649 WQTMSRNWGQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANWQ 786
Score = 57.0 bits (118), Expect(2) = 2e-027
Identities = 29/57 (50%), Positives = 30/57 (52%)
Frame = +2 / -1
Query: 782 STHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 952
S H S* PQ P S VL A V P P YPHAP +VPD S PP* VA A
Sbjct: 320 SLHFIS*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPHAPPIVPDASLPP*NVACA 150
>gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACC87 3' end, mRNA sequence
Length = 772
Score = 134 bits (287), Expect(4) = 4e-070
Identities = 51/75 (68%), Positives = 61/75 (81%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP EHFDLS P F IA+ +AGIVP+ YRRV C ++GGIR+TI G+ YFN+V ITNV
Sbjct: 407 WCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNV 586
Query: 525 GGAGDIAAVSVKGSK 481
GGAGD+ AVSVKG+K
Sbjct: 587 GGAGDVEAVSVKGAK 631
Score = 110 bits (235), Expect(4) = 4e-070
Identities = 39/75 (52%), Positives = 50/75 (66%)
Frame = -1 / +2
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W AHATFYGG D +GT GACGY + +QGYG T A+ST LF +G +CG CYE++C D
Sbjct: 137 WTSAHATFYGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCND 316
Query: 780 SPSGCKPDAAALVVT 736
P+ C P + + T
Sbjct: 317 DPAWCLPGSIVVTAT 361
Score = 54.2 bits (112), Expect(4) = 4e-070
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPA 343
W M RNWGQ WQ+ L +SL+F+V TSD + TS++V A
Sbjct: 638 WQPMSRNWGQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASA 766
Score = 24.0 bits (46), Expect(4) = 4e-070
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 750 ALVVTVTDLCPPKD 709
++VVT T+ CPP +
Sbjct: 341 SIVVTATNFCPPNN 382
>gb|DR050310.1|DR050310 RTBOR1_22_D04.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_22_D04_A029 5', mRNA sequence
Length = 806
Score = 127 bits (273), Expect(3) = 5e-070
Identities = 45/74 (60%), Positives = 61/74 (82%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAF +IA ++GIVPI +RR+ C ++GG+R+TI G+ YFN+V ITNV
Sbjct: 440 WCNPPLQHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNV 619
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ AVS+KGS
Sbjct: 620 GGAGDVEAVSIKGS 661
Score = 114 bits (244), Expect(3) = 5e-070
Identities = 43/82 (52%), Positives = 52/82 (63%)
Frame = -1 / +2
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G CG CYE++C D
Sbjct: 164 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKCND 343
Query: 780 SPSGCKPDAAALVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 344 QSDSQWCLPGTVTVTATNLCPP 409
Score = 85.8 bits (181), Expect(2) = 2e-027
Identities = 40/75 (53%), Positives = 46/75 (61%)
Frame = +2 / -3
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +TA+ SPAPPTLV+ T LK P++V R PP H L IGTMP AI+
Sbjct: 663 LEPLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*K 484
Query: 662 AGMLRSKCSRGGLHH 706
AG SKC RGGLHH
Sbjct: 483 AGCAMSKCWRGGLHH 439
Score = 62.0 bits (129), Expect(3) = 5e-070
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADW 337
W M RNWGQ WQ+ L ++L+F+V TSD R TS++V PA+W
Sbjct: 671 WQTMSRNWGQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANW 805
Score = 57.0 bits (118), Expect(2) = 2e-027
Identities = 29/57 (50%), Positives = 30/57 (52%)
Frame = +2 / -3
Query: 782 STHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 952
S H S* PQ P S VL A V P P YPHAP +VPD S PP* VA A
Sbjct: 342 SLHFIS*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPHAPPIVPDASLPP*NVACA 172
>gb|CX652556.1|CX652556 COLD1_59_H02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_59_H02_A029 5', mRNA sequence
Length = 699
Score = 135 bits (290), Expect(3) = 5e-070
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 221 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 400
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 401 AGAGDLVRVSVKGSQ 445
Score = 95.5 bits (202), Expect(3) = 5e-070
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = -1 / +2
Query: 903 GACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVDSPSGCKPDAAALVVTVTDL 724
GACGY + +QGYGVQ+ A+ST LF G +CG C+E++CV+ P C P +++VT T+
Sbjct: 2 GACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPGNPSILVTATNF 181
Query: 723 CPP 715
CPP
Sbjct: 182 CPP 190
Score = 93.2 bits (197), Expect(3) = 1e-029
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -1
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 441 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 262
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 261 GMERSKWGRGGLH 223
Score = 73.5 bits (154), Expect(3) = 5e-070
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQASK 307
W + RNWGQ WQ L +SL+FRV SD R +TSW+++P +W+FG T+ +
Sbjct: 452 WIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTFSGKQ 616
Score = 48.3 bits (99), Expect(3) = 1e-029
Identities = 27/64 (42%), Positives = 28/64 (43%)
Frame = +2 / -1
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 192 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 13
Query: 893 PHAP 904
P AP
Sbjct: 12 PQAP 1
Score = 27.2 bits (53), Expect(3) = 1e-029
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1 / -3
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
A+LP+ NVP G V + E + L + LP L PV+ P
Sbjct: 595 AKLPIWRHNVPGCGGPAVTASYSEGEALPDQDGAALPILAPVSGQWNP 452
>gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAD27 5' end, mRNA sequence
Length = 886
Score = 127 bits (272), Expect(4) = 6e-070
Identities = 46/74 (62%), Positives = 60/74 (81%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAF IA ++GIVPI +RRV C ++GG+R+TI G+ YFN+V ITNV
Sbjct: 420 WCNPPLQHFDMAQPAFQHIAIYRSGIVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNV 599
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ AVS+KGS
Sbjct: 600 GGAGDVEAVSIKGS 641
Score = 100 bits (214), Expect(4) = 6e-070
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = -1 / +3
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G+ CG CYE++C
Sbjct: 144 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGSTCGACYEMKC 317
Score = 83.1 bits (175), Expect(3) = 8e-031
Identities = 39/73 (53%), Positives = 45/73 (61%)
Frame = +2 / -1
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
P +TA+ SPAPPTLV+ T LK P++V R PP H TL IGT+P AI AG
Sbjct: 637 PLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPFLTHGTLLNMIGTIPLLYMAIC*KAG 458
Query: 668 MLRSKCSRGGLHH 706
SKC RGGLHH
Sbjct: 457 *AMSKCWRGGLHH 419
Score = 71.6 bits (150), Expect(4) = 6e-070
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQ 316
W M RNWGQ WQ+ L ++L+F+V TSD R TS++V PA+W+FG T++
Sbjct: 651 WQAMSRNWGQNWQSNSYLNGQTLSFQVTTSDGRIITSYNVAPANWQFGQTFE 806
Score = 54.2 bits (112), Expect(3) = 8e-031
Identities = 28/55 (50%), Positives = 29/55 (52%)
Frame = +2 / -1
Query: 788 HRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 952
H S* PQ P S VL A V P P YPHAP +VPD S PP* VA A
Sbjct: 316 HFIS*QAPQVEPLLKSAVLRAAVFVP*PWLYRLPYPHAPPIVPDASLPP*NVACA 152
Score = 35.0 bits (70), Expect(3) = 8e-031
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1 / -3
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
AELP+ G +V + +AG ER+ L ++ LP L PVA H P
Sbjct: 794 AELPICGSDVIGSDDSPIAGGDLERESLPIQIGVALPILSPVAGHCLP 651
Score = 22.6 bits (43), Expect(4) = 6e-070
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / +3
Query: 747 LVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 357 VTVTATNLCPP 389
>gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAI31 5' end, mRNA sequence
Length = 844
Score = 125 bits (267), Expect(4) = 6e-070
Identities = 45/74 (60%), Positives = 59/74 (79%)
Frame = -1 / +2
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAF I ++GIVPI +RRV C ++GG+R+TI G+ YFN+V ITNV
Sbjct: 401 WCNPPLQHFDMAQPAFQHIPIYRSGIVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNV 580
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ AVS+KGS
Sbjct: 581 GGAGDVEAVSIKGS 622
Score = 100 bits (214), Expect(4) = 6e-070
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = -1 / +2
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G +CG CYE++C
Sbjct: 125 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGASCGACYEMKC 298
Score = 81.3 bits (171), Expect(3) = 3e-029
Identities = 38/73 (52%), Positives = 44/73 (60%)
Frame = +2 / -2
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
P +TA+ SPAPPTLV+ T LK P++V R PP H TL IGT+P I AG
Sbjct: 618 PLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPFLTHGTLLNMIGTIPLLYMGIC*KAG 439
Query: 668 MLRSKCSRGGLHH 706
SKC RGGLHH
Sbjct: 438 *AMSKCWRGGLHH 400
Score = 73.9 bits (155), Expect(4) = 6e-070
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = -1 / +2
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQ 316
W M RNWGQ WQ+ L +SL+F+V TSD R TS++V PA+W+FG T++
Sbjct: 632 WQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSYNVAPANWQFGQTFE 787
Score = 54.7 bits (113), Expect(3) = 3e-029
Identities = 28/55 (50%), Positives = 29/55 (52%)
Frame = +2 / -2
Query: 788 HRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 952
H S* PQ P S VL A V P P YPHAP +VPD S PP* VA A
Sbjct: 297 HFIS*QAPQLAPLLKSAVLRAAVFVP*PWLYRLPYPHAPPIVPDASLPP*NVACA 133
Score = 31.3 bits (62), Expect(3) = 3e-029
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1 / -1
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
AELP+ +V + +AG ER+ L ++ LP L PVA H P
Sbjct: 775 AELPICRSDVIGSDGSPIAGGDLERETLPIQIGVALPILSPVAGHCLP 632
Score = 22.6 bits (43), Expect(4) = 6e-070
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / +2
Query: 747 LVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 338 VTVTATNLCPP 370
>gb|DT632413.1|DT632413 EST1147344 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFJ73 3' end, mRNA sequence
Length = 826
Score = 122 bits (262), Expect(3) = 9e-070
Identities = 47/74 (63%), Positives = 59/74 (79%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP HFD++ PAF +IA+ K+GIVPI YRRV C ++GGIR+TI G YFN+V I+NV
Sbjct: 444 WCNPPLRHFDMAEPAFEKIAKYKSGIVPILYRRVLCLRKGGIRFTINGLPYFNLVLISNV 623
Query: 525 GGAGDIAAVSVKGS 484
GGAG + AVS+KGS
Sbjct: 624 GGAGGVQAVSIKGS 665
Score = 114 bits (243), Expect(3) = 9e-070
Identities = 40/77 (51%), Positives = 51/77 (66%)
Frame = -1 / +3
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
G W+ HATFYGG D SGT GACGY + +QGYG T A+ST LF +G +CG CYE++C
Sbjct: 168 GDWEFGHATFYGGIDASGTMGGACGYGNLYSQGYGTDTAALSTALFNNGLSCGACYEMKC 347
Query: 786 VDSPSGCKPDAAALVVT 736
+D P C P + + T
Sbjct: 348 IDDPEWCLPGSVTVTAT 398
Score = 88.1 bits (186), Expect(3) = 5e-036
Identities = 39/73 (53%), Positives = 46/73 (63%)
Frame = +2 / -1
Query: 488 PFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAG 667
PF +TA PAPPTL + T LKY P+MV R+PP TL * +GT+P AI+ AG
Sbjct: 661 PFIETAWTPPAPPTLEMSTRLKYGRPLMVKRIPPFLKQRTLL*RMGTIPLLYLAIFSKAG 482
Query: 668 MLRSKCSRGGLHH 706
SKC RGGLHH
Sbjct: 481 SAMSKCRRGGLHH 443
Score = 66.6 bits (139), Expect(3) = 9e-070
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVT 322
W M RNWGQ WQ+ L +SL+F+V TSD R S++ P++W+FG T
Sbjct: 675 WQPMSRNWGQNWQSNSFLNGQSLSFKVTTSDGRTIVSYNAAPSNWQFGQT 824
Score = 64.8 bits (135), Expect(3) = 5e-036
Identities = 32/70 (45%), Positives = 35/70 (50%)
Frame = +2 / -1
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
V + G H G S H S*H PQ P N VL A V P P YPHAP +VP
Sbjct: 397 VAVTVTLPGKHHSGSSIHFIS*HAPQLSPLLNKAVLRAAVSVP*PWLYRFPYPHAPPIVP 218
Query: 917 DPSRPP*KVA 946
+ S PP* VA
Sbjct: 217 EASMPP*NVA 188
Score = 37.3 bits (75), Expect(3) = 5e-036
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +2 / -1
Query: 323 VTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFISVHL 475
V PN Q G +E +R SLV+T + +C CPQLR I L
Sbjct: 823 VWPNCQLEGAALYETIVRPSLVVTLKDRLCPFKKELLCQFCPQLRDIGCQL 671
>gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_B04_A029 5', mRNA sequence
Length = 810
Score = 127 bits (272), Expect(3) = 9e-070
Identities = 47/74 (63%), Positives = 59/74 (79%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAFLQIA K GIVPI +RRV C ++GG+R+TI G+ YFN+V ITNV
Sbjct: 427 WCNPPLQHFDMAQPAFLQIAIYKGGIVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNV 606
Query: 525 GGAGDIAAVSVKGS 484
AGD+ AVS+KGS
Sbjct: 607 ADAGDVEAVSIKGS 648
Score = 100 bits (212), Expect(3) = 9e-070
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = -1 / +1
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G CG CYE++C
Sbjct: 151 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLTCGACYEMKC 324
Score = 82.6 bits (174), Expect(3) = 2e-024
Identities = 40/75 (53%), Positives = 46/75 (61%)
Frame = +2 / -2
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +TA+ SPA TLV+ T LK P++V R PP H TLR +GTMP AI R
Sbjct: 650 LEPLMETASTSPASATLVMSTKLK*ECPLIVNRTPPFLTHGTLRNIMGTMPPL*MAICRK 471
Query: 662 AGMLRSKCSRGGLHH 706
AG SKC RGGLHH
Sbjct: 470 AG*AMSKCWRGGLHH 426
Score = 76.2 bits (160), Expect(3) = 9e-070
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTY 319
W EM RNWGQ WQ+ L +SL+FRV +SD R TS++V PA+W+FG T+
Sbjct: 658 WQEMSRNWGQNWQSNSYLNGQSLSFRVTSSDGRTVTSYNVAPANWQFGQTF 810
Score = 39.1 bits (79), Expect(3) = 2e-024
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2 / -2
Query: 323 VTPNFQSAGRTCHEVALRWSLVITRNVSDSQVRSSPVCHTCPQLRFIS 466
V PN Q AG T EV + SL++TR + +C CPQLR IS
Sbjct: 806 VWPNCQFAGATL*EVTVLPSLLVTRKERLCPFK*ELLCQFCPQLRDIS 663
Score = 33.6 bits (67), Expect(3) = 2e-024
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2 / -2
Query: 893 PHAPAVVPDPSRPP*KVAWA 952
PHAP +VP+ S PP* VA A
Sbjct: 218 PHAPPIVPEASLPP*NVACA 159
>gb|CF391890.1|CF391890 RTDR3_10_G01.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_G01_A022 5', mRNA
sequence
Length = 746
Score = 138 bits (295), Expect(3) = 2e-069
Identities = 48/89 (53%), Positives = 62/89 (69%)
Frame = -1 / +1
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
G + GPW AHATFYGG D SGT GACGY + +QGYGVQ+ A+ST LF G +CG C
Sbjct: 157 GVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGAC 336
Query: 801 YEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
+E++CV+ P C P +++VT T+ CPP
Sbjct: 337 FEIKCVNDPEWCHPGNPSILVTATNFCPP 423
Score = 135 bits (290), Expect(3) = 2e-069
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PPR HFDLSMP FL++A+ +AGIVP+ +RRV C KQGG+R+TI G KYFN+V ITNV
Sbjct: 454 WCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNV 633
Query: 525 GGAGDIAAVSVKGSK 481
GAGD+ VSVKGS+
Sbjct: 634 AGAGDLVRVSVKGSQ 678
Score = 93.2 bits (197), Expect(2) = 2e-035
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = +2 / -1
Query: 485 LPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNA 664
LPFT T SPAP T V+ T LKYL P+MV PPCF H TL GT+PA AI R
Sbjct: 674 LPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKI 495
Query: 665 GMLRSKCSRGGLH 703
GM RSK RGGLH
Sbjct: 494 GMERSKWGRGGLH 456
Score = 77.1 bits (162), Expect(2) = 2e-035
Identities = 40/85 (47%), Positives = 43/85 (50%)
Frame = +2 / -1
Query: 713 LGGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLY 892
LGG + V VT G H G TH S PQ P N VL A TPYP Y
Sbjct: 425 LGGQKLVAVTKIEGLPG*HHSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPY 246
Query: 893 PHAPAVVPDPSRPP*KVAWAGFHGP 967
P AP +VP+ S PP*KVA A F GP
Sbjct: 245 PQAPPMVPEASLPP*KVACASFQGP 171
Score = 29.0 bits (57), Expect(3) = 2e-069
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQ 433
W + RNWGQ WQ
Sbjct: 685 WIPLSRNWGQNWQ 723
>gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAZ77 3' end, mRNA sequence
Length = 848
Score = 127 bits (272), Expect(4) = 2e-069
Identities = 46/74 (62%), Positives = 60/74 (81%)
Frame = -1 / +3
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAF IA ++GIVPI +RRV C ++GG+R+TI G+ YFN+V ITNV
Sbjct: 465 WCNPPLQHFDMAQPAFQHIATYRSGIVPIIFRRVPCVRKGGVRFTINGHPYFNLVLITNV 644
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ AVS+KGS
Sbjct: 645 GGAGDVEAVSIKGS 686
Score = 99.1 bits (210), Expect(4) = 2e-069
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -1 / +3
Query: 960 WKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
W+ AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G CG CY+++C
Sbjct: 189 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 362
Score = 84.9 bits (179), Expect(3) = 2e-029
Identities = 41/75 (54%), Positives = 46/75 (61%)
Frame = +2 / -2
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +TA+ SPAPPTLV+ T LK P++V R PP H TL IGTMP AI
Sbjct: 688 LEPLMETASTSPAPPTLVMSTKLK*GCPLIVNRTPPFLTHGTLLKMIGTMPLLYVAIC*K 509
Query: 662 AGMLRSKCSRGGLHH 706
AG SKC RGGLHH
Sbjct: 508 AG*AMSKCWRGGLHH 464
Score = 71.6 bits (150), Expect(4) = 2e-069
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTY 319
W M RNWGQ WQ+ L ++L+F+V TSD R TS++V PA+W+FG T+
Sbjct: 696 WQAMSRNWGQNWQSNSYLNGQALSFQVTTSDGRTITSYNVAPANWQFGQTF 848
Score = 55.6 bits (115), Expect(3) = 2e-029
Identities = 27/55 (49%), Positives = 28/55 (50%)
Frame = +2 / -2
Query: 788 HRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 952
H * PQ P VL A V PYP YPHAP +VPD S PP* VA A
Sbjct: 361 HFIW*QAPQVAPLLKRAVLRAAVLVPYPWLYKLPYPHAPPIVPDASLPP*NVACA 197
Score = 27.2 bits (53), Expect(3) = 2e-029
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1 / -1
Query: 328 AELPVSGENVP*GGLAVVAGHHPERQRLAGEVLPGLPHLPPVALHLRP 471
A+LP+ G +V + +AG E L ++ LP L P+A H P
Sbjct: 839 AKLPICGSDVIGSDGSSIAGGDLEG*GLPIQIRVALPILSPIAGHCLP 696
Score = 22.6 bits (43), Expect(4) = 2e-069
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / +3
Query: 747 LVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 402 VTVTATNLCPP 434
>gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_35_D04_A029 5', mRNA sequence
Length = 751
Score = 130 bits (279), Expect(4) = 2e-069
Identities = 47/74 (63%), Positives = 61/74 (82%)
Frame = -1 / +1
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTITNV 526
WC PP +HFD++ PAF Q+A ++GIVPI +RRV C ++GG+R+TI GN YFN+V ITNV
Sbjct: 271 WCNPPLQHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNV 450
Query: 525 GGAGDIAAVSVKGS 484
GGAGD+ AVS+KGS
Sbjct: 451 GGAGDVEAVSIKGS 492
Score = 95.5 bits (202), Expect(4) = 2e-069
Identities = 34/57 (59%), Positives = 41/57 (71%)
Frame = -1 / +1
Query: 951 AHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRCVD 781
AHATFYGG D SGT GACGY + +QGYG T A+ST LF +G CG CY+++C D
Sbjct: 4 AHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKCND 174
Score = 86.3 bits (182), Expect(2) = 8e-026
Identities = 41/75 (54%), Positives = 46/75 (61%)
Frame = +2 / -3
Query: 482 LLPFTDTAAMSPAPPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRN 661
L P +TA+ SPAPPTLV+ T LK FP++V R PP H TL IGTMP A
Sbjct: 494 LEPLMETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIASC*K 315
Query: 662 AGMLRSKCSRGGLHH 706
AG SKC RGGLHH
Sbjct: 314 AG*AMSKCWRGGLHH 270
Score = 72.1 bits (151), Expect(4) = 2e-069
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = -1 / +1
Query: 471 WTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTYQ 316
W M RNWGQ WQ+ L +SL+F+V TSD R TS++ PA+W+FG T++
Sbjct: 502 WQPMSRNWGQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFE 657
Score = 51.5 bits (106), Expect(2) = 8e-026
Identities = 27/57 (47%), Positives = 28/57 (49%)
Frame = +2 / -3
Query: 782 STHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*KVAWA 952
S H * P P S VL A V P P YPHAP +VPD S PP* VA A
Sbjct: 173 SLHFIW*QAPHVAPLLKSAVLRAAVFVP*PWLYKLPYPHAPPIVPDASLPP*NVACA 3
Score = 22.6 bits (43), Expect(4) = 2e-069
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / +1
Query: 747 LVVTVTDLCPP 715
+ VT T+LCPP
Sbjct: 208 VTVTATNLCPP 240
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 540,995,952
Number of Sequences: 355925
Number of extensions: 9541863
Number of successful extensions: 75221
Number of sequences better than 1.0e-020: 290
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 14729473000
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)