TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3099514.2.1
(547 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX250118.1|BX250118 BX250118 Pinus pinaster differenciat... 159 2e-038
gb|BQ634334.1|BQ634334 NXRV067_F08_F NXRV (Nsf Xylem Root w... 159 2e-038
gb|CF395750.1|CF395750 RTDS2_16_G04.g1_A021 Drought-stresse... 159 2e-038
gb|CF666812.1|CF666812 RTCNT1_26_G09.b1_A029 Root control P... 159 2e-038
gb|BX679995.1|BX679995 BX679995 RS Pinus pinaster cDNA clon... 159 2e-038
gb|BX682343.2|BX682343 BX682343 Pinus pinaster differenciat... 159 2e-038
gb|BX784099.1|BX784099 BX784099 Pinus pinaster differenciat... 159 2e-038
gb|CR354737.1|CR354737 CR354737 Pinus pinaster differenciat... 159 2e-038
gb|CO159648.1|CO159648 FLD1_14_H08.g1_A029 Root flooded Pin... 159 2e-038
gb|CO162081.1|CO162081 FLD1_33_C12.b1_A029 Root flooded Pin... 159 2e-038
gb|CO165677.1|CO165677 FLD1_56_F04.b1_A029 Root flooded Pin... 159 2e-038
gb|CO165746.1|CO165746 FLD1_56_F04.g1_A029 Root flooded Pin... 159 2e-038
gb|CO166735.1|CO166735 FLD1_64_D04.b1_A029 Root flooded Pin... 159 2e-038
gb|CO167170.1|CO167170 FLD1_67_G05.b1_A029 Root flooded Pin... 159 2e-038
gb|CO167251.1|CO167251 FLD1_67_G05.g1_A029 Root flooded Pin... 159 2e-038
gb|CO197649.1|CO197649 GEO1_8_A11.b1_A029 Root gravitropism... 159 2e-038
gb|CX651969.1|CX651969 COLD1_56_C01.b1_A029 Root cold Pinus... 159 2e-038
gb|CX652040.1|CX652040 COLD1_56_C01.g1_A029 Root cold Pinus... 159 2e-038
gb|DR016988.1|DR016988 STRS1_13_H07.b1_A034 Shoot tip pitch... 159 2e-038
gb|DR051919.1|DR051919 RTCA1_1_F12.b1_A029 Roots minus calc... 159 2e-038
gb|DR069941.1|DR069941 RTDK1_10_G09.b1_A029 Roots, dark Pin... 159 2e-038
gb|DR078047.1|DR078047 RTFEPL1_1_C11.g1_A029 Roots plus add... 159 2e-038
gb|DR097037.1|DR097037 STRR1_32_C03.b1_A033 Stem Response R... 159 2e-038
gb|AW289714.1|AW289714 NXNV005B09F Nsf Xylem Normal wood Ve... 157 5e-038
gb|CD028294.1|CD028294 NXNV005B09 Nsf Xylem Normal wood Ver... 157 5e-038
gb|BX254919.1|BX254919 BX254919 Pinus pinaster differenciat... 157 6e-038
gb|CX646729.1|CX646729 COLD1_11_D10.b1_A029 Root cold Pinus... 157 6e-038
gb|CX646807.1|CX646807 COLD1_11_D10.g1_A029 Root cold Pinus... 157 6e-038
gb|CX713924.1|CX713924 RTPQ1_15_A12.b1_A032 Roots treated w... 157 6e-038
gb|DR388766.1|DR388766 RTHG1_30_H02.b1_A029 Roots plus adde... 157 6e-038
dbj|BD236026.1| Materials and method for modification of pl... 157 6e-038
gb|BX251481.1|BX251481 BX251481 Pinus pinaster differenciat... 156 1e-037
gb|BX253318.1|BX253318 BX253318 Pinus pinaster differenciat... 156 1e-037
gb|BX254862.1|BX254862 BX254862 Pinus pinaster differenciat... 155 2e-037
gb|BM492334.1|BM492334 NXRV_024_G09_F NXRV (Nsf Xylem Root ... 155 2e-037
gb|CO161663.1|CO161663 FLD1_30_H01.b1_A029 Root flooded Pin... 155 2e-037
gb|CO161740.1|CO161740 FLD1_30_H01.g1_A029 Root flooded Pin... 155 2e-037
gb|CO164792.1|CO164792 FLD1_50_G11.b1_A029 Root flooded Pin... 155 2e-037
gb|CO164873.1|CO164873 FLD1_50_G11.g1_A029 Root flooded Pin... 155 2e-037
gb|BQ633787.1|BQ633787 NXRV060_G04_F NXRV (Nsf Xylem Root w... 154 6e-037
gb|AW290497.1|AW290497 NXNV027F08F Nsf Xylem Normal wood Ve... 151 3e-036
gb|CD027157.1|CD027157 NXNV027F08 Nsf Xylem Normal wood Ver... 151 3e-036
gb|BG040120.1|BG040120 NXSI_106_F11_F NXSI (Nsf Xylem Side ... 147 7e-035
gb|CO159080.1|CO159080 FLD1_11_E10.b1_A029 Root flooded Pin... 147 7e-035
gb|CO160661.1|CO160661 FLD1_23_D04.b1_A029 Root flooded Pin... 147 7e-035
gb|CO160719.1|CO160719 FLD1_23_D04.g1_A029 Root flooded Pin... 147 7e-035
gb|CO161008.1|CO161008 FLD1_26_C02.b1_A029 Root flooded Pin... 147 7e-035
gb|CO161082.1|CO161082 FLD1_26_C02.g1_A029 Root flooded Pin... 147 7e-035
gb|CO163883.1|CO163883 FLD1_44_H06.b1_A029 Root flooded Pin... 147 7e-035
gb|CO164155.1|CO164155 FLD1_46_E01.b1_A029 Root flooded Pin... 147 7e-035
gb|DR022138.1|DR022138 STRS1_49_D01.b1_A034 Shoot tip pitch... 147 7e-035
gb|DR051574.1|DR051574 RTBOR1_31_B01.b1_A029 Roots plus add... 147 7e-035
gb|DR078984.1|DR078984 RTFEPL1_8_E10.b1_A029 Roots plus add... 147 7e-035
gb|DR079569.1|DR079569 RTFEPL1_12_D08.b1_A029 Roots plus ad... 147 7e-035
gb|DR385522.1|DR385522 RTHG1_9_E02.b1_A029 Roots plus added... 147 7e-035
gb|DT634818.1|DT634818 EST1149749 Normalized pine embryo li... 147 7e-035
gb|DR384875.1|DR384875 RTHG1_5_D12.b1_A029 Roots plus added... 144 5e-034
gb|BX677434.1|BX677434 BX677434 RN Pinus pinaster cDNA clon... 130 2e-033
gb|CO164617.1|CO164617 FLD1_49_E08.b1_A029 Root flooded Pin... 142 2e-033
gb|CX713009.1|CX713009 RTPQ1_6_H09.b1_A032 Roots treated wi... 84 2e-033
dbj|BD236053.1| Materials and method for modification of pl... 135 3e-031
gb|CO159452.1|CO159452 FLD1_13_E06.g1_A029 Root flooded Pin... 132 2e-030
gb|BX251711.1|BX251711 BX251711 Pinus pinaster differenciat... 120 7e-027
gb|DR017393.1|DR017393 STRS1_16_B06.b1_A034 Shoot tip pitch... 120 7e-027
gb|CO367141.1|CO367141 RTK1_32_A08.g1_A029 Roots minus pota... 120 9e-027
gb|AW011443.1|AW011443 ST20G11 Pine TriplEx shoot tip libra... 119 2e-026
gb|BX249092.1|BX249092 BX249092 Pinus pinaster differenciat... 119 2e-026
gb|DR688658.1|DR688658 EST1078743 Normalized pine embryo li... 78 2e-026
gb|AY705802.1| Pinus halepensis clone 21r sucrose synthase ... 98 3e-026
gb|BF778186.1|BF778186 NXSI_080_B07_F NXSI (Nsf Xylem Side ... 106 9e-023
gb|DR388937.1|DR388937 RTHG1_31_A01.g1_A029 Roots plus adde... 106 1e-022
gb|CF396660.1|CF396660 RTDS2_23_A01.b1_A021 Drought-stresse... 84 2e-022
gb|BQ291210.1|BQ291210 NXRV057_C11_F NXRV (Nsf Xylem Root w... 90 3e-022
gb|BQ700047.1|BQ700047 NXRV134_A10_F NXRV (Nsf Xylem Root w... 103 1e-021
gb|DR021509.1|DR021509 STRS1_45_D07.b1_A034 Shoot tip pitch... 102 2e-021
>gb|BX250118.1|BX250118 BX250118 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP032F07 similar to SUCROSE SYNTHASE, mRNA
sequence
Length = 654
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 66 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 245
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 246 TLKYRNLVKTVPLAVEE 296
>gb|BQ634334.1|BQ634334 NXRV067_F08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_F08 5' similar to Arabidopsis thaliana
sequence At4g02280 putative sucrose synthetase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 679
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 286 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 465
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 466 TLKYRNLVKTVPLAVEE 516
>gb|CF395750.1|CF395750 RTDS2_16_G04.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_16_G04_A021 5', mRNA sequence
Length = 788
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 278 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 457
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 458 TLKYRNLVKTVPLAVEE 508
>gb|CF666812.1|CF666812 RTCNT1_26_G09.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_26_G09_A029 3', mRNA sequence
Length = 776
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 179 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 358
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 359 TLKYRNLVKTVPLAVEE 409
>gb|BX679995.1|BX679995 BX679995 RS Pinus pinaster cDNA clone RS37H04, mRNA sequence
Length = 590
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 91 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 270
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 271 TLKYRNLVKTVPLAVEE 321
>gb|BX682343.2|BX682343 BX682343 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 115C09 similar to Sucrose synthase (EC
2.4.1.13), mRNA sequence
Length = 612
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 266 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 445
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 446 TLKYRNLVKTVPLAVEE 496
>gb|BX784099.1|BX784099 BX784099 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 129B02 similar to Sucrose synthase (EC
2.4.1.13), mRNA sequence
Length = 623
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 110 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 289
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 290 TLKYRNLVKTVPLAVEE 340
>gb|CR354737.1|CR354737 CR354737 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 125G08, mRNA sequence
Length = 729
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 228 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 407
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 408 TLKYRNLVKTVPLAVEE 458
>gb|CO159648.1|CO159648 FLD1_14_H08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_14_H08_A029 5', mRNA sequence
Length = 770
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / -2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 592 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 413
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 412 TLKYRNLVKTVPLAVEE 362
>gb|CO162081.1|CO162081 FLD1_33_C12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_33_C12_A029 3', mRNA sequence
Length = 764
Score = 159 bits (341), Expect = 2e-038
Identities = 62/77 (80%), Positives = 69/77 (89%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +W KIS AGLQRIYEKYTWKIYSE+LM LAGVYGFWKYVSKLERRET RYLEMFY
Sbjct: 275 KTDPGYWDKISNAGLQRIYEKYTWKIYSEKLMTLAGVYGFWKYVSKLERRETHRYLEMFY 454
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R+L KTVPLA+++
Sbjct: 455 TLKYRDLVKTVPLAVEE 505
>gb|CO165677.1|CO165677 FLD1_56_F04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_56_F04_A029 3', mRNA sequence
Length = 778
Score = 159 bits (341), Expect = 2e-038
Identities = 62/77 (80%), Positives = 69/77 (89%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +W KIS AGLQRIYEKYTWKIYSE+LM LAGVYGFWKYVSKLERRET RYLEMFY
Sbjct: 275 KTDPGYWDKISNAGLQRIYEKYTWKIYSEKLMTLAGVYGFWKYVSKLERRETHRYLEMFY 454
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R+L KTVPLA+++
Sbjct: 455 TLKYRDLVKTVPLAVEE 505
>gb|CO165746.1|CO165746 FLD1_56_F04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_56_F04_A029 5', mRNA sequence
Length = 776
Score = 159 bits (341), Expect = 2e-038
Identities = 62/77 (80%), Positives = 69/77 (89%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +W KIS AGLQRIYEKYTWKIYSE+LM LAGVYGFWKYVSKLERRET RYLEMFY
Sbjct: 258 KTDPGYWDKISNAGLQRIYEKYTWKIYSEKLMTLAGVYGFWKYVSKLERRETHRYLEMFY 437
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R+L KTVPLA+++
Sbjct: 438 TLKYRDLVKTVPLAVEE 488
>gb|CO166735.1|CO166735 FLD1_64_D04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_64_D04_A029 3', mRNA sequence
Length = 746
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 63 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 242
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 243 TLKYRNLVKTVPLAVEE 293
>gb|CO167170.1|CO167170 FLD1_67_G05.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_G05_A029 3', mRNA sequence
Length = 769
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / -1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 445 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 266
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 265 TLKYRNLVKTVPLAVEE 215
>gb|CO167251.1|CO167251 FLD1_67_G05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_G05_A029 5', mRNA sequence
Length = 903
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / -3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 550 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 371
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 370 TLKYRNLVKTVPLAVEE 320
>gb|CO197649.1|CO197649 GEO1_8_A11.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_8_A11_A029 3', mRNA sequence
Length = 769
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / -1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 412 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 233
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 232 TLKYRNLVKTVPLAVEE 182
>gb|CX651969.1|CX651969 COLD1_56_C01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_C01_A029 3', mRNA sequence
Length = 653
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / -1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 245 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 66
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 65 TLKYRNLVKTVPLAVEE 15
>gb|CX652040.1|CX652040 COLD1_56_C01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_C01_A029 5', mRNA sequence
Length = 692
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / -3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 624 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 445
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 444 TLKYRNLVKTVPLAVEE 394
>gb|DR016988.1|DR016988 STRS1_13_H07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_13_H07_A034 3', mRNA sequence
Length = 786
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 208 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 387
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 388 TLKYRNLVKTVPLAVEE 438
>gb|DR051919.1|DR051919 RTCA1_1_F12.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_1_F12_A029 3', mRNA sequence
Length = 854
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 261 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 440
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 441 TLKYRNLVKTVPLAVEE 491
>gb|DR069941.1|DR069941 RTDK1_10_G09.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_10_G09_A029 3', mRNA sequence
Length = 790
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 170 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 349
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 350 TLKYRNLVKTVPLAVEE 400
>gb|DR078047.1|DR078047 RTFEPL1_1_C11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_1_C11_A029 5', mRNA sequence
Length = 865
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / -3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 605 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 426
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 425 TLKYRNLVKTVPLAVEE 375
>gb|DR097037.1|DR097037 STRR1_32_C03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_32_C03_A033 3', mRNA sequence
Length = 765
Score = 159 bits (341), Expect = 2e-038
Identities = 61/77 (79%), Positives = 69/77 (89%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 124 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 303
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 304 TLKYRNLVKTVPLAVEE 354
>gb|AW289714.1|AW289714 NXNV005B09F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV005B09 5', mRNA sequence
Length = 278
Score = 157 bits (338), Expect = 5e-038
Identities = 61/77 (79%), Positives = 68/77 (88%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 13 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 192
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+ +
Sbjct: 193 TLKYRNLVKTVPLAVXE 243
>gb|CD028294.1|CD028294 NXNV005B09 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV005B09 5' similar to Arabidopsis thaliana sequence
At4g02280 putative sucrose synthetase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 278
Score = 157 bits (338), Expect = 5e-038
Identities = 61/77 (79%), Positives = 68/77 (88%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 13 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 192
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+ +
Sbjct: 193 TLKYRNLVKTVPLAVXE 243
>gb|BX254919.1|BX254919 BX254919 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP107E01 similar to SUCROSE SYNTHASE, mRNA
sequence
Length = 673
Score = 157 bits (337), Expect = 6e-038
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP HW KIS GLQRIYEKYTW+IY++RLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 4 KTDPSHWEKISNGGLQRIYEKYTWQIYADRLMTLSGVYGFWKYVSKLERRETRRYLEMFY 183
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 184 SLKYRNLVKTVPLAVEE 234
>gb|CX646729.1|CX646729 COLD1_11_D10.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_D10_A029 3', mRNA sequence
Length = 710
Score = 157 bits (337), Expect = 6e-038
Identities = 60/77 (77%), Positives = 69/77 (89%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERL+ L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 69 KTDPSYWVKISDGGLQRIYERYTWKIYAERLITLSGVYGFWKYVSKLERRETRRYLEMFY 248
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 249 TLKYRNLVKTVPLAVEE 299
>gb|CX646807.1|CX646807 COLD1_11_D10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_D10_A029 5', mRNA sequence
Length = 870
Score = 157 bits (337), Expect = 6e-038
Identities = 60/77 (77%), Positives = 69/77 (89%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERL+ L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 576 KTDPSYWVKISDGGLQRIYERYTWKIYAERLITLSGVYGFWKYVSKLERRETRRYLEMFY 755
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 756 TLKYRNLVKTVPLAVEE 806
>gb|CX713924.1|CX713924 RTPQ1_15_A12.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_15_A12_A032 3', mRNA sequence
Length = 811
Score = 157 bits (337), Expect = 6e-038
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP HW KIS GLQRIYEKYTW+IY++RLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 150 KTDPSHWEKISNGGLQRIYEKYTWQIYADRLMTLSGVYGFWKYVSKLERRETRRYLEMFY 329
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 330 SLKYRNLVKTVPLAVEE 380
>gb|DR388766.1|DR388766 RTHG1_30_H02.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_30_H02_A029 3', mRNA sequence
Length = 901
Score = 157 bits (337), Expect = 6e-038
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP HW KIS GLQRIYEKYTW+IY++RLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 206 KTDPSHWEKISNGGLQRIYEKYTWQIYADRLMTLSGVYGFWKYVSKLERRETRRYLEMFY 385
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 386 SLKYRNLVKTVPLAVEE 436
>dbj|BD236026.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 1169
Score = 157 bits (337), Expect = 6e-038
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP HW KIS GLQRIYEKYTW+IY++RLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 732 KTDPSHWEKISNGGLQRIYEKYTWQIYADRLMTLSGVYGFWKYVSKLERRETRRYLEMFY 911
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 912 SLKYRNLVKTVPLAVEE 962
>gb|BX251481.1|BX251481 BX251481 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP050B05 similar to SUCROSE SYNTHASE, mRNA
sequence
Length = 701
Score = 156 bits (335), Expect = 1e-037
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVS LERRETRRYLEMFY
Sbjct: 408 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSXLERRETRRYLEMFY 587
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 588 TLKYRNLVKTVPLAVEE 638
>gb|BX253318.1|BX253318 BX253318 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP081C04 similar to SUCROSE SYNTHASE, mRNA
sequence
Length = 642
Score = 156 bits (335), Expect = 1e-037
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVS LERRETRRYLEMFY
Sbjct: 392 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSXLERRETRRYLEMFY 571
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L KTVPLA+++
Sbjct: 572 TLKYRNLVKTVPLAVEE 622
>gb|BX254862.1|BX254862 BX254862 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP106C06, mRNA sequence
Length = 528
Score = 155 bits (334), Expect = 2e-037
Identities = 60/75 (80%), Positives = 68/75 (90%)
Frame = +2 / +3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W IS AGLQRIYEKYTWKIYSE+LM LAGVYGFWKYVSKLERRETRRYLEMFY L
Sbjct: 3 DPGYWDNISNAGLQRIYEKYTWKIYSEKLMTLAGVYGFWKYVSKLERRETRRYLEMFYTL 182
Query: 188 KFRELAKTVPLAIDQ 232
K+++L KTVPLA+++
Sbjct: 183 KYKDLVKTVPLAVEE 227
>gb|BM492334.1|BM492334 NXRV_024_G09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_024_G09 5' similar to Arabidopsis thaliana
sequence At4g02280 putative sucrose synthetase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 504
Score = 155 bits (333), Expect = 2e-037
Identities = 60/76 (78%), Positives = 67/76 (88%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLER ETRRYLEMFY
Sbjct: 200 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERXETRRYLEMFY 379
Query: 182 ILKFRELAKTVPLAID 229
LK+R L KTVPLA++
Sbjct: 380 TLKYRNLVKTVPLAVE 427
>gb|CO161663.1|CO161663 FLD1_30_H01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_30_H01_A029 3', mRNA sequence
Length = 797
Score = 155 bits (333), Expect = 2e-037
Identities = 60/77 (77%), Positives = 69/77 (89%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP W KIS AGLQRIYE+YTW+IY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 8 KSDPSCWDKISNAGLQRIYERYTWQIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 187
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R+L KTVPLA+++
Sbjct: 188 TLKYRDLVKTVPLAVEE 238
>gb|CO161740.1|CO161740 FLD1_30_H01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_30_H01_A029 5', mRNA sequence
Length = 874
Score = 155 bits (333), Expect = 2e-037
Identities = 60/77 (77%), Positives = 69/77 (89%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP W KIS AGLQRIYE+YTW+IY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 249 KSDPSCWDKISNAGLQRIYERYTWQIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 428
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R+L KTVPLA+++
Sbjct: 429 TLKYRDLVKTVPLAVEE 479
>gb|CO164792.1|CO164792 FLD1_50_G11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_G11_A029 3', mRNA sequence
Length = 863
Score = 155 bits (333), Expect = 2e-037
Identities = 60/77 (77%), Positives = 69/77 (89%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP W KIS AGLQRIYE+YTW+IY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 74 KSDPSCWDKISNAGLQRIYERYTWQIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 253
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R+L KTVPLA+++
Sbjct: 254 TLKYRDLVKTVPLAVEE 304
>gb|CO164873.1|CO164873 FLD1_50_G11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_G11_A029 5', mRNA sequence
Length = 791
Score = 155 bits (333), Expect = 2e-037
Identities = 60/77 (77%), Positives = 69/77 (89%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP W KIS AGLQRIYE+YTW+IY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 106 KSDPSCWDKISNAGLQRIYERYTWQIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 285
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R+L KTVPLA+++
Sbjct: 286 TLKYRDLVKTVPLAVEE 336
>gb|BQ633787.1|BQ633787 NXRV060_G04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV060_G04 5' similar to Arabidopsis thaliana
sequence At4g02280 putative sucrose synthetase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 579
Score = 154 bits (330), Expect = 6e-037
Identities = 59/76 (77%), Positives = 66/76 (86%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +WVKIS GLQRIYE+YTWKIY+ERLM L+GVYGFWKYVSKLERRETRRYLEMFY
Sbjct: 251 KTDPSYWVKISDGGLQRIYERYTWKIYAERLMTLSGVYGFWKYVSKLERRETRRYLEMFY 430
Query: 182 ILKFRELAKTVPLAID 229
LK+R L KTVP ++
Sbjct: 431 TLKYRNLVKTVPXXVE 478
>gb|AW290497.1|AW290497 NXNV027F08F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV027F08 5', mRNA sequence
Length = 472
Score = 151 bits (325), Expect = 3e-036
Identities = 58/77 (75%), Positives = 66/77 (85%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP HW KIS GLQRIYEKYTW+IY++RLM L+GVYGFW YVSKLERRETRRYLEMFY
Sbjct: 189 KTDPSHWEKISNGGLQRIYEKYTWQIYADRLMTLSGVYGFWXYVSKLERRETRRYLEMFY 368
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L TVPLA+++
Sbjct: 369 SLKYRNLXXTVPLAVEE 419
>gb|CD027157.1|CD027157 NXNV027F08 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV027F08 5' similar to Arabidopsis thaliana sequence
At3g43190 sucrose synthase like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 472
Score = 151 bits (325), Expect = 3e-036
Identities = 58/77 (75%), Positives = 66/77 (85%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP HW KIS GLQRIYEKYTW+IY++RLM L+GVYGFW YVSKLERRETRRYLEMFY
Sbjct: 189 KTDPSHWEKISNGGLQRIYEKYTWQIYADRLMTLSGVYGFWXYVSKLERRETRRYLEMFY 368
Query: 182 ILKFRELAKTVPLAIDQ 232
LK+R L TVPLA+++
Sbjct: 369 SLKYRNLXXTVPLAVEE 419
>gb|BG040120.1|BG040120 NXSI_106_F11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_106_F11 5' similar to Arabidopsis thaliana
sequence At4g02280 putative sucrose synthetase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 541
Score = 147 bits (315), Expect = 7e-035
Identities = 56/77 (72%), Positives = 66/77 (85%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +W IS GLQRIYE+YTWKIY+E+LM LAGVYGFWKYVSKLERRE+ RYLEMFY
Sbjct: 93 KTDPSYWDTISNGGLQRIYERYTWKIYAEKLMTLAGVYGFWKYVSKLERRESFRYLEMFY 272
Query: 182 ILKFRELAKTVPLAIDQ 232
ILK+R L KTVP ++++
Sbjct: 273 ILKYRNLVKTVPFSVEE 323
>gb|CO159080.1|CO159080 FLD1_11_E10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_11_E10_A029 3', mRNA sequence
Length = 805
Score = 147 bits (315), Expect = 7e-035
Identities = 56/77 (72%), Positives = 66/77 (85%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +W IS GLQRIYE+YTWKIY+E+LM LAGVYGFWKYVSKLERRE+ RYLEMFY
Sbjct: 263 KTDPSYWDTISNGGLQRIYERYTWKIYAEKLMTLAGVYGFWKYVSKLERRESFRYLEMFY 442
Query: 182 ILKFRELAKTVPLAIDQ 232
ILK+R L KTVP ++++
Sbjct: 443 ILKYRNLVKTVPFSVEE 493
>gb|CO160661.1|CO160661 FLD1_23_D04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_23_D04_A029 3', mRNA sequence
Length = 803
Score = 147 bits (315), Expect = 7e-035
Identities = 56/77 (72%), Positives = 66/77 (85%)
Frame = +2 / +3
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +W IS GLQRIYE+YTWKIY+E+LM LAGVYGFWKYVSKLERRE+ RYLEMFY
Sbjct: 180 KTDPSYWDTISNGGLQRIYERYTWKIYAEKLMTLAGVYGFWKYVSKLERRESFRYLEMFY 359
Query: 182 ILKFRELAKTVPLAIDQ 232
ILK+R L KTVP ++++
Sbjct: 360 ILKYRNLVKTVPFSVEE 410
>gb|CO160719.1|CO160719 FLD1_23_D04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_23_D04_A029 5', mRNA sequence
Length = 723
Score = 147 bits (315), Expect = 7e-035
Identities = 56/77 (72%), Positives = 66/77 (85%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +W IS GLQRIYE+YTWKIY+E+LM LAGVYGFWKYVSKLERRE+ RYLEMFY
Sbjct: 476 KTDPSYWDTISNGGLQRIYERYTWKIYAEKLMTLAGVYGFWKYVSKLERRESFRYLEMFY 655
Query: 182 ILKFRELAKTVPLAIDQ 232
ILK+R L KTVP ++++
Sbjct: 656 ILKYRNLVKTVPFSVEE 706
>gb|CO161008.1|CO161008 FLD1_26_C02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_26_C02_A029 3', mRNA sequence
Length = 882
Score = 147 bits (315), Expect = 7e-035
Identities = 56/77 (72%), Positives = 66/77 (85%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +W IS GLQRIYE+YTWKIY+E+LM LAGVYGFWKYVSKLERRE+ RYLEMFY
Sbjct: 338 KTDPSYWDTISNGGLQRIYERYTWKIYAEKLMTLAGVYGFWKYVSKLERRESFRYLEMFY 517
Query: 182 ILKFRELAKTVPLAIDQ 232
ILK+R L KTVP ++++
Sbjct: 518 ILKYRNLVKTVPFSVEE 568
>gb|CO161082.1|CO161082 FLD1_26_C02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_26_C02_A029 5', mRNA sequence
Length = 865
Score = 147 bits (315), Expect = 7e-035
Identities = 56/77 (72%), Positives = 66/77 (85%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +W IS GLQRIYE+YTWKIY+E+LM LAGVYGFWKYVSKLERRE+ RYLEMFY
Sbjct: 442 KTDPSYWDTISNGGLQRIYERYTWKIYAEKLMTLAGVYGFWKYVSKLERRESFRYLEMFY 621
Query: 182 ILKFRELAKTVPLAIDQ 232
ILK+R L KTVP ++++
Sbjct: 622 ILKYRNLVKTVPFSVEE 672
>gb|CO163883.1|CO163883 FLD1_44_H06.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_44_H06_A029 3', mRNA sequence
Length = 750
Score = 147 bits (315), Expect = 7e-035
Identities = 56/77 (72%), Positives = 66/77 (85%)
Frame = +2 / +1
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +W IS GLQRIYE+YTWKIY+E+LM LAGVYGFWKYVSKLERRE+ RYLEMFY
Sbjct: 208 KTDPSYWDTISNGGLQRIYERYTWKIYAEKLMTLAGVYGFWKYVSKLERRESFRYLEMFY 387
Query: 182 ILKFRELAKTVPLAIDQ 232
ILK+R L KTVP ++++
Sbjct: 388 ILKYRNLVKTVPFSVEE 438
>gb|CO164155.1|CO164155 FLD1_46_E01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_46_E01_A029 3', mRNA sequence
Length = 804
Score = 147 bits (315), Expect = 7e-035
Identities = 56/77 (72%), Positives = 66/77 (85%)
Frame = +2 / +2
Query: 2 KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
K DP +W IS GLQRIYE+YTWKIY+E+LM LAGVYGFWKYVSKLERRE+ RYLEMFY
Sbjct: 263 KTDPSYWDTISNGGLQRIYERYTWKIYAEKLMTLAGVYGFWKYVSKLERRESFRYLEMFY 442
Query: 182 ILKFRELAKTVPLAIDQ 232
ILK+R L KTVP ++++
Sbjct: 443 ILKYRNLVKTVPFSVEE 493
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 276,161,642
Number of Sequences: 355925
Number of extensions: 3621228
Number of successful extensions: 103712
Number of sequences better than 1.0e-020: 93
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 7055564100
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)