TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071667.2.1
(597 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF392132.1|CF392132 RTDR3_8_D07.b1_A022 Loblolly pine ro... 177 6e-044
gb|CF392983.1|CF392983 RTDR3_18_E06.b1_A022 Loblolly pine r... 177 8e-044
gb|CO163412.1|CO163412 FLD1_41_B05.g1_A029 Root flooded Pin... 177 8e-044
gb|DR014188.1|DR014188 HEAT1_24_A02.b1_A029 Root at 37 C fo... 177 8e-044
gb|DR014263.1|DR014263 HEAT1_24_A02.g1_A029 Root at 37 C fo... 177 8e-044
gb|CF474820.1|CF474820 RTWW2_8_G11.b1_A021 Well-watered lob... 174 4e-043
gb|BX254251.1|BX254251 BX254251 Pinus pinaster differenciat... 172 1e-042
gb|CF673131.1|CF673131 RTCNT1_76_G10.b1_A029 Root control P... 172 2e-042
gb|CV032465.1|CV032465 RTNACL1_8_H04.b1_A029 Roots plus add... 172 2e-042
gb|DR011698.1|DR011698 HEAT1_7_G09.b1_A029 Root at 37 C for... 172 2e-042
gb|DR050418.1|DR050418 RTBOR1_23_H04.b1_A029 Roots plus add... 172 2e-042
gb|DR070348.1|DR070348 RTDK1_12_F05.g1_A029 Roots, dark Pin... 172 2e-042
gb|DR681812.1|DR681812 EST1071887 Normalized pine embryo li... 171 3e-042
gb|DR091587.1|DR091587 RTAL1_22_D06.g1_A029 Roots plus adde... 171 4e-042
gb|DR177385.1|DR177385 RTMNUT1_5_B10.b1_A029 Roots minus mi... 171 4e-042
gb|CF478586.1|CF478586 RTWW3_16_C08.b1_A022 Well-watered lo... 171 5e-042
gb|CO196946.1|CO196946 GEO1_2_F12.g1_A029 Root gravitropism... 171 5e-042
gb|CX714531.1|CX714531 RTPQ1_23_F07.b1_A032 Roots treated w... 171 5e-042
gb|DR050731.1|DR050731 RTBOR1_25_G12.b1_A029 Roots plus add... 171 5e-042
gb|DR060686.1|DR060686 RTNIT1_29_H06.b1_A029 Roots minus ni... 171 5e-042
gb|DR179598.1|DR179598 RTMNUT1_23_D08.b2_A029 Roots minus m... 171 5e-042
gb|CO200378.1|CO200378 GEO2_7_C07.b1_A032 Root gravitropism... 169 1e-041
gb|DR056886.1|DR056886 RTNIT1_1_E04.b1_A029 Roots minus nit... 169 2e-041
gb|DR059511.1|DR059511 RTNIT1_18_D05.b1_A029 Roots minus ni... 169 2e-041
gb|CF472876.1|CF472876 RTDS1_12_H12.b1_A015 Drought-stresse... 168 3e-041
gb|CF664050.1|CF664050 RTCNT1_7_A11.b1_A029 Root control Pi... 165 2e-040
gb|CF389302.1|CF389302 RTDR2_9_A07.g1_A021 Loblolly pine ro... 164 4e-040
gb|DR056369.1|DR056369 RTCA1_29_G06.g1_A029 Roots minus cal... 161 4e-039
gb|DR056832.1|DR056832 RTCA1_32_G06.g1_A029 Roots minus cal... 161 4e-039
gb|DR177769.1|DR177769 RTMNUT1_7_F08.b1_A029 Roots minus mi... 161 4e-039
gb|DR177850.1|DR177850 RTMNUT1_7_F08.g1_A029 Roots minus mi... 161 4e-039
gb|BX249261.1|BX249261 BX249261 Pinus pinaster differenciat... 160 8e-039
gb|BQ634345.1|BQ634345 NXRV067_G08_F NXRV (Nsf Xylem Root w... 160 8e-039
gb|CF477810.1|CF477810 RTWW3_13_G03.b1_A022 Well-watered lo... 160 8e-039
gb|CF668401.1|CF668401 RTCNT1_36_F09.b1_A029 Root control P... 160 8e-039
gb|CF668484.1|CF668484 RTCNT1_36_F09.g1_A029 Root control P... 160 8e-039
gb|CF669555.1|CF669555 RTCNT1_44_H12.b1_A029 Root control P... 160 8e-039
gb|CF671734.1|CF671734 RTCNT1_59_A09.b1_A029 Root control P... 160 8e-039
gb|BX682280.2|BX682280 BX682280 Pinus pinaster differenciat... 160 8e-039
gb|CO170424.1|CO170424 NDL1_14_C04.b1_A029 Needles control ... 160 8e-039
gb|CO175447.1|CO175447 NDL1_54_G01.g1_A029 Needles control ... 160 8e-039
gb|CO175456.1|CO175456 NDL1_54_H01.g1_A029 Needles control ... 160 8e-039
gb|CO197063.1|CO197063 GEO1_3_D05.g1_A029 Root gravitropism... 160 8e-039
gb|CO361906.1|CO361906 NDL2_7_H02.g1_A029 Needles control 2... 160 8e-039
gb|CO362282.1|CO362282 RTK1_2_C07.g1_A029 Roots minus potas... 160 8e-039
gb|CO369401.1|CO369401 RTK1_46_H06.g1_A029 Roots minus pota... 160 8e-039
gb|CX650671.1|CX650671 COLD1_47_G02.b1_A029 Root cold Pinus... 160 8e-039
gb|CX713282.1|CX713282 RTPQ1_8_D04.b1_A032 Roots treated wi... 160 8e-039
gb|CX713358.1|CX713358 RTPQ1_8_D04.g1_A032 Roots treated wi... 160 8e-039
gb|DR024478.1|DR024478 STRS1_65_F02.b1_A034 Shoot tip pitch... 160 8e-039
gb|DR058242.1|DR058242 RTNIT1_10_D09.g1_A029 Roots minus ni... 160 8e-039
gb|DR060297.1|DR060297 RTNIT1_27_A11.b1_A029 Roots minus ni... 160 8e-039
gb|DR060677.1|DR060677 RTNIT1_29_G05.b1_A029 Roots minus ni... 160 8e-039
gb|DR068988.1|DR068988 RTDK1_4_D03.b1_A029 Roots, dark Pinu... 160 8e-039
gb|DR118085.1|DR118085 RTMG1_11_B11.b1_A029 Roots minus mag... 160 8e-039
gb|DR118162.1|DR118162 RTMG1_11_B11.g1_A029 Roots minus mag... 160 8e-039
gb|DR179755.1|DR179755 RTMNUT1_24_E06.b2_A029 Roots minus m... 160 8e-039
gb|DR180243.1|DR180243 RTMNUT1_27_H03.b1_A029 Roots minus m... 160 8e-039
gb|DR180323.1|DR180323 RTMNUT1_27_H03.g1_A029 Roots minus m... 160 8e-039
gb|CX712825.1|CX712825 RTPQ1_5_B12.b1_A032 Roots treated wi... 159 1e-038
gb|DR078006.1|DR078006 RTFEPL1_1_G10.b1_A029 Roots plus add... 159 1e-038
gb|BF610538.1|BF610538 NXSI_059_G05_F NXSI (Nsf Xylem Side ... 158 4e-038
gb|DR117322.1|DR117322 RTMG1_6_F10.b1_A029 Roots minus magn... 157 5e-038
gb|DR054443.1|DR054443 RTCA1_17_H12.b1_A029 Roots minus cal... 157 7e-038
gb|CF395276.1|CF395276 RTDS2_10_G06.g1_A021 Drought-stresse... 138 3e-037
gb|CF665023.1|CF665023 RTCNT1_13_H10.b1_A029 Root control P... 154 5e-037
gb|CO167937.1|CO167937 FLD1_72_F02.b1_A029 Root flooded Pin... 154 5e-037
gb|CO168019.1|CO168019 FLD1_72_F02.g1_A029 Root flooded Pin... 154 5e-037
gb|CO363622.1|CO363622 RTK1_10_G06.g1_A029 Roots minus pota... 154 5e-037
gb|CV032282.1|CV032282 RTNACL1_7_C11.b1_A029 Roots plus add... 154 5e-037
gb|CV137491.1|CV137491 EST848700 Sequencing ESTs from loblo... 154 5e-037
gb|DR017022.1|DR017022 STRS1_13_C10.g1_A034 Shoot tip pitch... 154 5e-037
gb|DR019762.1|DR019762 STRS1_32_F06.b1_A034 Shoot tip pitch... 154 5e-037
gb|DR019838.1|DR019838 STRS1_32_F06.g1_A034 Shoot tip pitch... 154 5e-037
gb|DR059893.1|DR059893 RTNIT1_20_A03.g1_A029 Roots minus ni... 154 5e-037
gb|DR079081.1|DR079081 RTFEPL1_9_A09.b1_A029 Roots plus add... 154 5e-037
gb|DR079158.1|DR079158 RTFEPL1_9_A09.g1_A029 Roots plus add... 154 5e-037
gb|DR079574.1|DR079574 RTFEPL1_12_E02.b1_A029 Roots plus ad... 154 5e-037
gb|DR681989.1|DR681989 EST1072064 Normalized pine embryo li... 154 5e-037
gb|DR743971.1|DR743971 RTCU1_19_H05.b1_A029 Roots plus adde... 154 5e-037
gb|DT626393.1|DT626393 EST1158317 Sequencing ESTs from lobl... 154 5e-037
gb|CF390813.1|CF390813 RTDR3_2_E01.b1_A022 Loblolly pine ro... 145 2e-036
gb|DR681990.1|DR681990 EST1072065 Normalized pine embryo li... 150 8e-036
gb|DN610459.1|DN610459 EST963509 Subtracted pine embryo lib... 148 4e-035
gb|DT627914.1|DT627914 EST1156663 Subtracted pine embryo li... 148 4e-035
gb|CO370462.1|CO370462 RTK1_68_B12.b1_A029 Roots minus pota... 106 4e-034
gb|DR050863.1|DR050863 RTBOR1_26_D09.b1_A029 Roots plus add... 144 5e-034
gb|BQ654796.1|BQ654796 NXRV085_G08_F NXRV (Nsf Xylem Root w... 140 9e-033
gb|DR011778.1|DR011778 HEAT1_7_G09.g1_A029 Root at 37 C for... 138 3e-032
gb|DR050030.1|DR050030 RTBOR1_20_G09.g1_A029 Roots plus add... 137 8e-032
gb|DR054728.1|DR054728 RTCA1_19_E01.b1_A029 Roots minus cal... 135 3e-031
gb|CO200457.1|CO200457 GEO2_7_C07.g1_A032 Root gravitropism... 132 2e-030
gb|DR169352.1|DR169352 RTPHOS1_31_F11.g1_A029 Roots minus p... 129 2e-029
gb|DR059811.1|DR059811 RTNIT1_20_A03.b1_A029 Roots minus ni... 127 6e-029
gb|DR744045.1|DR744045 RTCU1_19_H05.g1_A029 Roots plus adde... 127 6e-029
gb|BE241360.1|BE241360 NXNV_186_H11_F Nsf Xylem Normal wood... 124 4e-028
gb|CO367200.1|CO367200 RTK1_32_G05.g1_A029 Roots minus pota... 124 6e-028
gb|DR092906.1|DR092906 STRR1_4_G04.g1_A033 Stem Response Re... 122 2e-027
gb|CO161047.1|CO161047 FLD1_26_G06.b1_A029 Root flooded Pin... 122 3e-027
gb|CO161127.1|CO161127 FLD1_26_G06.g1_A029 Root flooded Pin... 122 3e-027
gb|DR081463.1|DR081463 RTFEPL1_29_G05.g1_A029 Roots plus ad... 121 4e-027
gb|AL750794.1|AL750794 AL750794 RN Pinus pinaster cDNA clon... 119 1e-026
gb|DN611491.1|DN611491 EST964541 Subtracted pine embryo lib... 119 1e-026
gb|DN612192.1|DN612192 EST965242 Subtracted pine embryo lib... 119 1e-026
gb|BQ107303.1|BQ107303 NXLV092_A03_F NXLV (Nsf Xylem Late w... 118 3e-026
gb|AW754594.1|AW754594 PC04B01 Pine TriplEx pollen cone lib... 115 3e-025
gb|CF479741.1|CF479741 RTWW3_12_B06.b1_A022 Well-watered lo... 115 3e-025
gb|DR060018.1|DR060018 RTNIT1_25_E04.b1_A029 Roots minus ni... 115 3e-025
gb|BX682419.1|BX682419 BX682419 Pinus pinaster differenciat... 114 5e-025
gb|CF393447.1|CF393447 RTDR3_13_F08.b1_A022 Loblolly pine r... 113 1e-024
gb|CF474032.1|CF474032 RTWW2_18_C08.b1_A021 Well-watered lo... 113 1e-024
gb|CF664508.1|CF664508 RTCNT1_10_F05.b1_A029 Root control P... 113 1e-024
gb|CO159040.1|CO159040 FLD1_11_A05.b1_A029 Root flooded Pin... 113 1e-024
gb|CO159111.1|CO159111 FLD1_11_A05.g1_A029 Root flooded Pin... 113 1e-024
gb|CO159438.1|CO159438 FLD1_13_C12.g1_A029 Root flooded Pin... 113 1e-024
gb|DN450818.1|DN450818 EST946617 Sequencing ESTs from loblo... 113 1e-024
gb|DN628031.1|DN628031 EST978847 Subtracted pine embryo lib... 113 1e-024
gb|DN628852.1|DN628852 EST979668 Subtracted pine embryo lib... 113 1e-024
gb|DN630889.1|DN630889 EST981705 Subtracted pine embryo lib... 113 1e-024
gb|DN632729.1|DN632729 EST983545 Subtracted pine embryo lib... 113 1e-024
gb|DN634085.1|DN634085 EST984901 Subtracted pine embryo lib... 113 1e-024
gb|DR013139.1|DR013139 HEAT1_17_F05.b1_A029 Root at 37 C fo... 113 1e-024
gb|DR024062.1|DR024062 STRS1_62_B05.b1_A034 Shoot tip pitch... 113 1e-024
gb|DR055988.1|DR055988 RTCA1_27_G07.b1_A029 Roots minus cal... 113 1e-024
gb|DR117730.1|DR117730 RTMG1_8_G01.g1_A029 Roots minus magn... 113 1e-024
gb|DR178749.1|DR178749 RTMNUT1_13_F03.g1_A029 Roots minus m... 113 1e-024
gb|DR179164.1|DR179164 RTMNUT1_16_H11.b1_A029 Roots minus m... 113 1e-024
gb|DR179243.1|DR179243 RTMNUT1_16_H11.g1_A029 Roots minus m... 113 1e-024
gb|DR181728.1|DR181728 RTMNUT1_40_D09.g2_A029 Roots minus m... 113 1e-024
gb|DR386118.1|DR386118 RTHG1_13_C02.b1_A029 Roots plus adde... 113 1e-024
gb|DR387808.1|DR387808 RTHG1_24_F11.b1_A029 Roots plus adde... 113 1e-024
gb|DT625150.1|DT625150 EST1159425 Sequencing ESTs from lobl... 113 1e-024
gb|CX648261.1|CX648261 COLD1_27_B11.g1_A029 Root cold Pinus... 112 2e-024
gb|DN631306.1|DN631306 EST982122 Subtracted pine embryo lib... 112 2e-024
gb|DR055965.1|DR055965 RTCA1_27_E03.b1_A029 Roots minus cal... 108 3e-023
gb|DR169176.1|DR169176 RTPHOS1_30_C07.g1_A029 Roots minus p... 106 1e-022
gb|DR016293.1|DR016293 STRS1_9_F03.b1_A034 Shoot tip pitch ... 106 1e-022
gb|DR047895.1|DR047895 RTBOR1_5_H04.b2_A029 Roots plus adde... 106 1e-022
gb|CF393543.1|CF393543 RTDR3_13_F08.g1_A022 Loblolly pine r... 105 2e-022
gb|BX680375.1|BX680375 BX680375 RS Pinus pinaster cDNA clon... 105 2e-022
gb|DR054804.1|DR054804 RTCA1_19_E01.g1_A029 Roots minus cal... 105 2e-022
gb|DR161509.1|DR161509 RTFE1_12_F05.b1_A029 Roots minus iro... 105 3e-022
gb|DR161595.1|DR161595 RTFE1_12_F05.g1_A029 Roots minus iro... 105 3e-022
gb|DR056290.1|DR056290 RTCA1_29_G06.b1_A029 Roots minus cal... 102 3e-021
gb|DR010880.1|DR010880 HEAT1_1_H12.g1_A029 Root at 37 C for... 100 9e-021
>gb|CF392132.1|CF392132 RTDR3_8_D07.b1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_8_D07_A022 3', mRNA
sequence
Length = 697
Score = 177 bits (381), Expect = 6e-044
Identities = 69/101 (68%), Positives = 83/101 (82%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS+ KF+T++E IE N T YGLAAGIV+K++D NR+SRS+RAG +WVNCY+AF
Sbjct: 37 IFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKNIDTVNRLSRSIRAGMIWVNCYYAF 216
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PDAPFGGYKMSG GR+QGL + YL VKSVIT L +SPW
Sbjct: 217 YPDAPFGGYKMSGIGREQGLDVLKNYLAVKSVITPLHESPW 339
Score = 105 bits (224), Expect = 3e-022
Identities = 52/100 (52%), Positives = 60/100 (60%)
Frame = +1 / -3
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
G+S V+T LT + + P S P PLILYPP GASG A *Q T +PAR D ++ L
Sbjct: 335 GDSWRGVITDLTAK*FLRTSRPCSLPIPLILYPPNGASG*NA**QLTQIIPARIDLESLL 156
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
S TIPAA PY+V L SI SS VLN DMTGP I
Sbjct: 155 TVSIFFDTIPAAKPYIVLLPSSIASSMVLNLKMDMTGPNI 36
>gb|CF392983.1|CF392983 RTDR3_18_E06.b1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_18_E06_A022 3', mRNA
sequence
Length = 607
Score = 177 bits (380), Expect = 8e-044
Identities = 69/101 (68%), Positives = 81/101 (80%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS+ KF+T++E IE N T YGLAAGIV+K +D NR+SRS+RAG +WVNCY+AF
Sbjct: 224 IFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDIDTVNRLSRSIRAGVIWVNCYYAF 403
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PDAPFGGYKMSG GR+QGL + YL VK VIT L DSPW
Sbjct: 404 FPDAPFGGYKMSGIGREQGLDVLKNYLAVKCVITPLHDSPW 526
Score = 107 bits (228), Expect = 8e-023
Identities = 53/100 (53%), Positives = 59/100 (59%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LT + + P S P PLILYPP GASG A *Q T PAR D ++ L
Sbjct: 522 GESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPNGASGKNA**QLTQITPARIDLESLL 343
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
S TIPAA PY+V L S+ SS VLN DMTGP I
Sbjct: 342 TVSISFDTIPAAKPYIVLLPSSMASSMVLNLKMDMTGPNI 223
>gb|CO163412.1|CO163412 FLD1_41_B05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_41_B05_A029 5', mRNA sequence
Length = 794
Score = 177 bits (380), Expect = 8e-044
Identities = 69/101 (68%), Positives = 81/101 (80%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS+ KF+T++E IE N T YGLAAGIV+K +D NR+SRS+RAG +WVNCY+AF
Sbjct: 415 IFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDIDTVNRLSRSIRAGVIWVNCYYAF 236
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PDAPFGGYKMSG GR+QGL + YL VK VIT L DSPW
Sbjct: 235 FPDAPFGGYKMSGIGREQGLDVLKNYLAVKCVITPLHDSPW 113
Score = 107 bits (228), Expect = 8e-023
Identities = 53/100 (53%), Positives = 59/100 (59%)
Frame = +1 / +3
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LT + + P S P PLILYPP GASG A *Q T PAR D ++ L
Sbjct: 117 GESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPNGASGKNA**QLTQITPARIDLESLL 296
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
S TIPAA PY+V L S+ SS VLN DMTGP I
Sbjct: 297 TVSISFDTIPAAKPYIVLLPSSMASSMVLNLKMDMTGPNI 416
>gb|DR014188.1|DR014188 HEAT1_24_A02.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_24_A02_A029 3', mRNA sequence
Length = 753
Score = 177 bits (380), Expect = 8e-044
Identities = 69/101 (68%), Positives = 81/101 (80%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS+ KF+T++E IE N T YGLAAGIV+K +D NR+SRS+RAG +WVNCY+AF
Sbjct: 325 IFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDIDTVNRLSRSIRAGVIWVNCYYAF 504
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PDAPFGGYKMSG GR+QGL + YL VK VIT L DSPW
Sbjct: 505 FPDAPFGGYKMSGIGREQGLDVLKNYLAVKCVITPLHDSPW 627
Score = 109 bits (232), Expect = 2e-023
Identities = 54/100 (54%), Positives = 60/100 (60%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LT + + P S P PLILYPP GASG A *Q T PAR D ++ L
Sbjct: 623 GESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPNGASGKNA**QLTQITPARIDLESLL 444
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
S L TIPAA PY+V L S+ SS VLN DMTGP I
Sbjct: 443 TVSISLDTIPAAKPYIVLLPSSMASSMVLNLKMDMTGPNI 324
>gb|DR014263.1|DR014263 HEAT1_24_A02.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_24_A02_A029 5', mRNA sequence
Length = 925
Score = 177 bits (380), Expect = 8e-044
Identities = 69/101 (68%), Positives = 81/101 (80%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS+ KF+T++E IE N T YGLAAGIV+K +D NR+SRS+RAG +WVNCY+AF
Sbjct: 506 IFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDIDTVNRLSRSIRAGVIWVNCYYAF 685
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PDAPFGGYKMSG GR+QGL + YL VK VIT L DSPW
Sbjct: 686 FPDAPFGGYKMSGIGREQGLDVLKNYLAVKCVITPLHDSPW 808
Score = 109 bits (232), Expect = 2e-023
Identities = 54/100 (54%), Positives = 60/100 (60%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LT + + P S P PLILYPP GASG A *Q T PAR D ++ L
Sbjct: 804 GESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPNGASGKNA**QLTQITPARIDLESLL 625
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
S L TIPAA PY+V L S+ SS VLN DMTGP I
Sbjct: 624 TVSISLDTIPAAKPYIVLLPSSMASSMVLNLKMDMTGPNI 505
>gb|CF474820.1|CF474820 RTWW2_8_G11.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_8_G11_A021 3', mRNA sequence
Length = 564
Score = 174 bits (375), Expect = 4e-043
Identities = 68/101 (67%), Positives = 80/101 (79%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS+ KF+T++E IE N T YGLAAGIV+K +D NR+SRS+RAG +WVNCY+AF
Sbjct: 181 IFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDIDTVNRLSRSIRAGVIWVNCYYAF 360
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PDAPFGGYKMSG GR+ GL + YL VK VIT L DSPW
Sbjct: 361 FPDAPFGGYKMSGIGREHGLDVLKNYLAVKCVITPLHDSPW 483
Score = 107 bits (228), Expect = 8e-023
Identities = 53/100 (53%), Positives = 59/100 (59%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LT + + P S P PLILYPP GASG A *Q T PAR D ++ L
Sbjct: 479 GESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPNGASGKNA**QLTQITPARIDLESLL 300
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
S TIPAA PY+V L S+ SS VLN DMTGP I
Sbjct: 299 TVSISFDTIPAAKPYIVLLPSSMASSMVLNLKMDMTGPNI 180
>gb|BX254251.1|BX254251 BX254251 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP095F04, mRNA sequence
Length = 429
Score = 172 bits (371), Expect = 1e-042
Identities = 68/101 (67%), Positives = 82/101 (81%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGIVTK +++ANR+SRS+RAGTVW+ Y A
Sbjct: 21 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIVTKDINIANRLSRSLRAGTVWMGSYLAV 200
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PDAP GGYKMSGFGR+ G ++ YLQVK VIT L DSPW
Sbjct: 201 SPDAPLGGYKMSGFGREYGSYGLENYLQVKCVITPLQDSPW 323
Score = 114 bits (243), Expect = 6e-025
Identities = 56/100 (56%), Positives = 63/100 (63%)
Frame = +1 / -3
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP GASG A+* HTVPAR D ++
Sbjct: 319 GES*RGVMTHLTCK*FSRP*EPYSLPNPLILYPPSGASGLTAR*LPIHTVPARRDLESLF 140
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LVTIPA P +V SITSS VLNF D+TGP I
Sbjct: 139 AIFISLVTIPAPKP*IVLFPLSITSSMVLNFKMDITGPNI 20
>gb|CF673131.1|CF673131 RTCNT1_76_G10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_76_G10_A029 3', mRNA sequence
Length = 695
Score = 172 bits (370), Expect = 2e-042
Identities = 66/101 (65%), Positives = 81/101 (80%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+RAGTVW+N Y A
Sbjct: 324 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRISRSLRAGTVWINSYLAV 503
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 504 SPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 626
Score = 109 bits (232), Expect = 2e-023
Identities = 54/100 (54%), Positives = 60/100 (60%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVPAR D +
Sbjct: 622 GES*RGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGLTAR*LLIHTVPARRDLEILF 443
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 442 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 323
>gb|CV032465.1|CV032465 RTNACL1_8_H04.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_8_H04_A029 3', mRNA sequence
Length = 744
Score = 172 bits (370), Expect = 2e-042
Identities = 66/101 (65%), Positives = 81/101 (80%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+RAGTVW+N Y A
Sbjct: 376 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRISRSLRAGTVWINSYLAV 555
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 556 SPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 678
Score = 109 bits (232), Expect = 2e-023
Identities = 54/100 (54%), Positives = 60/100 (60%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVPAR D +
Sbjct: 674 GES*RGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGLTAR*LLIHTVPARRDLEILF 495
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 494 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 375
>gb|DR011698.1|DR011698 HEAT1_7_G09.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_7_G09_A029 3', mRNA sequence
Length = 834
Score = 172 bits (370), Expect = 2e-042
Identities = 66/101 (65%), Positives = 81/101 (80%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+RAGTVW+N Y A
Sbjct: 367 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRISRSLRAGTVWINSYLAV 546
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 547 SPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 669
Score = 109 bits (232), Expect = 2e-023
Identities = 54/100 (54%), Positives = 60/100 (60%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVPAR D +
Sbjct: 665 GES*RGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGLTAR*LLIHTVPARRDLEILF 486
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 485 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 366
>gb|DR050418.1|DR050418 RTBOR1_23_H04.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_23_H04_A029 3', mRNA sequence
Length = 867
Score = 172 bits (370), Expect = 2e-042
Identities = 66/101 (65%), Positives = 81/101 (80%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+RAGTVW+N Y A
Sbjct: 468 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRISRSLRAGTVWINSYLAV 647
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 648 SPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 770
Score = 109 bits (232), Expect = 2e-023
Identities = 54/100 (54%), Positives = 60/100 (60%)
Frame = +1 / -3
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVPAR D +
Sbjct: 766 GES*RGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGLTAR*LLIHTVPARRDLEILF 587
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 586 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 467
>gb|DR070348.1|DR070348 RTDK1_12_F05.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_12_F05_A029 5', mRNA sequence
Length = 592
Score = 172 bits (370), Expect = 2e-042
Identities = 66/101 (65%), Positives = 81/101 (80%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+RAGTVW+N Y A
Sbjct: 402 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRISRSLRAGTVWINSYLAV 223
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 222 SPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 100
Score = 109 bits (232), Expect = 2e-023
Identities = 54/100 (54%), Positives = 60/100 (60%)
Frame = +1 / +2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVPAR D +
Sbjct: 104 GES*RGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGLTAR*LLIHTVPARRDLEILF 283
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 284 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 403
>gb|DR681812.1|DR681812 EST1071887 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA204, mRNA sequence
Length = 575
Score = 171 bits (369), Expect = 3e-042
Identities = 69/108 (63%), Positives = 82/108 (75%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT+DE IE+ N T YGL AGIVTK++DVANR +RS+ AG VW+NCY
Sbjct: 442 IFGPVMSILKFKTIDEAIERGNKTIYGLGAGIVTKNIDVANRFARSLCAGMVWINCYLVG 263
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPWY*VEPGT 273
PD P GGYKMSG GR+ G ++ YLQVKSVIT L +SPW * P T
Sbjct: 262 SPDCPMGGYKMSGIGREYGSTGLENYLQVKSVITPLQESPWL*EFPTT 119
Score = 121 bits (258), Expect = 6e-027
Identities = 58/108 (53%), Positives = 67/108 (62%)
Frame = +1 / +3
Query: 274 VPGSTQYHGESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPA 453
V G++ G+S S VMT LTC+ S P+S P PLILYPP G SG +*Q HT+PA
Sbjct: 120 VVGNSYNQGDS*SGVMTDLTCK*FSRPVDPYSLPIPLILYPPIGQSGLPTR*QLIHTIPA 299
Query: 454 RTDRDTRLATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
D LATS LVTIPA P +V SI SS VLNF D+TGPKI
Sbjct: 300 HKDLANLLATSMFLVTIPAPKP*IVLFPLSIASSIVLNFKIDITGPKI 443
>gb|DR091587.1|DR091587 RTAL1_22_D06.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_22_D06_A029 5', mRNA sequence
Length = 725
Score = 171 bits (368), Expect = 4e-042
Identities = 66/101 (65%), Positives = 80/101 (79%)
Frame = -2 / -3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS+ KF++++E IE N T YGLAAGI+TK++D+ NR+SRS+RAG +WVNCY A
Sbjct: 480 IFGPVMSVFKFRSIEEAIELGNKTIYGLAAGIMTKNIDIVNRLSRSIRAGVIWVNCYAAL 301
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPD P GGYKMSG GR+QGL + YL VK VIT L DSPW
Sbjct: 300 DPDTPIGGYKMSGIGREQGLDVLKNYLAVKCVITPLHDSPW 178
Score = 105 bits (223), Expect = 4e-022
Identities = 51/100 (51%), Positives = 58/100 (58%)
Frame = +1 / +2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LT + + P S P PLILYPP G SGS A *Q T PAR D ++ L
Sbjct: 182 GESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPIGVSGSNAA*QLTQITPARIDLESLL 361
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
S V IPAA PY+V S+ SS +LN DMTGP I
Sbjct: 362 TISIFFVIIPAAKPYIVLFPSSMASSILLNLKTDMTGPNI 481
>gb|DR177385.1|DR177385 RTMNUT1_5_B10.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_5_B10_A029 3', mRNA sequence
Length = 646
Score = 171 bits (368), Expect = 4e-042
Identities = 66/101 (65%), Positives = 80/101 (79%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS+ KF++++E IE N T YGLAAGI+TK++D+ NR+SRS+RAG +WVNCY A
Sbjct: 251 IFGPVMSVFKFRSIEEAIELGNKTIYGLAAGIMTKNIDIVNRLSRSIRAGVIWVNCYAAL 430
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
DPD P GGYKMSG GR+QGL + YL VK VIT L DSPW
Sbjct: 431 DPDTPIGGYKMSGIGREQGLDVLKNYLAVKCVITPLHDSPW 553
Score = 104 bits (221), Expect = 7e-022
Identities = 51/100 (51%), Positives = 58/100 (58%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LT + + P S P PLILYPP G SGS A *Q T PAR D ++ L
Sbjct: 549 GES*RGVMTHLTAK*FLRTSRPCSLPIPLILYPPIGVSGSNAA*QLTQITPARIDLESLL 370
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
S V IPAA PY+V S+ SS +LN DMTGP I
Sbjct: 369 TISIFFVIIPAAKPYIVLFPSSMASSILLNLKTDMTGPNI 250
>gb|CF478586.1|CF478586 RTWW3_16_C08.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_16_C08_A022 3', mRNA sequence
Length = 643
Score = 171 bits (367), Expect = 5e-042
Identities = 66/101 (65%), Positives = 81/101 (80%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+RAGTVW+N Y A
Sbjct: 272 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRLSRSLRAGTVWINSYLAV 451
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 452 GPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 574
Score = 111 bits (237), Expect = 4e-024
Identities = 54/100 (54%), Positives = 61/100 (61%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVPAR D ++
Sbjct: 570 GESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPARRDLESLF 391
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 390 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 271
>gb|CO196946.1|CO196946 GEO1_2_F12.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_2_F12_A029 5', mRNA sequence
Length = 773
Score = 171 bits (367), Expect = 5e-042
Identities = 66/101 (65%), Positives = 81/101 (80%)
Frame = -2 / -1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+RAGTVW+N Y A
Sbjct: 347 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRLSRSLRAGTVWINSYLAV 168
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 167 GPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 45
Score = 111 bits (237), Expect = 4e-024
Identities = 54/100 (54%), Positives = 61/100 (61%)
Frame = +1 / +1
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVPAR D ++
Sbjct: 49 GESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPARRDLESLF 228
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 229 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 348
>gb|CX714531.1|CX714531 RTPQ1_23_F07.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_23_F07_A032 3', mRNA sequence
Length = 654
Score = 171 bits (367), Expect = 5e-042
Identities = 66/101 (65%), Positives = 81/101 (80%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+RAGTVW+N Y A
Sbjct: 249 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRLSRSLRAGTVWINSYLAV 428
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 429 GPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 551
Score = 111 bits (237), Expect = 4e-024
Identities = 54/100 (54%), Positives = 61/100 (61%)
Frame = +1 / -3
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVPAR D ++
Sbjct: 547 GESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPARRDLESLF 368
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 367 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 248
>gb|DR050731.1|DR050731 RTBOR1_25_G12.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_G12_A029 3', mRNA sequence
Length = 826
Score = 171 bits (367), Expect = 5e-042
Identities = 66/101 (65%), Positives = 81/101 (80%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+RAGTVW+N Y A
Sbjct: 412 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRLSRSLRAGTVWINSYLAV 591
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 592 GPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 714
Score = 111 bits (237), Expect = 4e-024
Identities = 54/100 (54%), Positives = 61/100 (61%)
Frame = +1 / -3
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVPAR D ++
Sbjct: 710 GESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPARRDLESLF 531
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 530 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 411
>gb|DR060686.1|DR060686 RTNIT1_29_H06.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_29_H06_A029 3', mRNA sequence
Length = 782
Score = 171 bits (367), Expect = 5e-042
Identities = 66/101 (65%), Positives = 81/101 (80%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+RAGTVW+N Y A
Sbjct: 376 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRLSRSLRAGTVWINSYLAV 555
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 556 GPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 678
Score = 111 bits (237), Expect = 4e-024
Identities = 54/100 (54%), Positives = 61/100 (61%)
Frame = +1 / -1
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVPAR D ++
Sbjct: 674 GESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPARRDLESLF 495
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 494 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 375
>gb|DR179598.1|DR179598 RTMNUT1_23_D08.b2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_23_D08_A029 3', mRNA sequence
Length = 716
Score = 171 bits (367), Expect = 5e-042
Identities = 66/101 (65%), Positives = 81/101 (80%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+RAGTVW+N Y A
Sbjct: 363 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRLSRSLRAGTVWINSYLAV 542
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 543 GPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 665
Score = 111 bits (237), Expect = 4e-024
Identities = 54/100 (54%), Positives = 61/100 (61%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVPAR D ++
Sbjct: 661 GESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPARRDLESLF 482
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 481 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 362
>gb|CO200378.1|CO200378 GEO2_7_C07.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_7_C07_A032 3', mRNA sequence
Length = 767
Score = 169 bits (364), Expect = 1e-041
Identities = 66/101 (65%), Positives = 78/101 (77%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS+ KF+T++E IE N T YGLAAGI +K++D NR+SRS+RAG +WVNCY
Sbjct: 390 IFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIASKNIDTVNRISRSIRAGVIWVNCYHVV 569
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PDAPFGGYKMSG GR+QGL + YL VK VIT L DSPW
Sbjct: 570 FPDAPFGGYKMSGIGREQGLDVLKNYLAVKCVITPLHDSPW 692
Score = 105 bits (224), Expect = 3e-022
Identities = 52/100 (52%), Positives = 58/100 (58%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LT + + P S P PLILYPP GASG+ *Q T PAR D + L
Sbjct: 688 GESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPNGASGNTTW*QLTQITPARIDLEILL 509
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
S L IPAA PY+V L S+ SS VLN DMTGP I
Sbjct: 508 TVSIFLDAIPAAKPYIVLLPSSMASSMVLNLKMDMTGPNI 389
>gb|DR056886.1|DR056886 RTNIT1_1_E04.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_1_E04_A029 3', mRNA sequence
Length = 777
Score = 169 bits (363), Expect = 2e-041
Identities = 65/101 (64%), Positives = 80/101 (79%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+R GTVW+N Y A
Sbjct: 367 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRLSRSLRVGTVWINSYLAV 546
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 547 GPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 669
Score = 109 bits (233), Expect = 2e-023
Identities = 53/100 (53%), Positives = 60/100 (60%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVP R D ++
Sbjct: 665 GESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPTRRDLESLF 486
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 485 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 366
>gb|DR059511.1|DR059511 RTNIT1_18_D05.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_18_D05_A029 3', mRNA sequence
Length = 732
Score = 169 bits (363), Expect = 2e-041
Identities = 65/101 (64%), Positives = 80/101 (79%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+R GTVW+N Y A
Sbjct: 325 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRLSRSLRVGTVWINSYLAV 504
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PD P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 505 GPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 627
Score = 109 bits (233), Expect = 2e-023
Identities = 53/100 (53%), Positives = 60/100 (60%)
Frame = +1 / -2
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G SG A+* HTVP R D ++
Sbjct: 623 GESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPTRRDLESLF 444
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 443 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 324
>gb|CF472876.1|CF472876 RTDS1_12_H12.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_12_H12_A015 3', mRNA sequence
Length = 550
Score = 168 bits (361), Expect = 3e-041
Identities = 66/101 (65%), Positives = 79/101 (78%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS+ KF++++E IE N T YGLAAGIV+K++D NR+SRS+RAG +WVNCY
Sbjct: 39 IFGPVMSIFKFRSIEEAIELGNKTIYGLAAGIVSKNIDTVNRLSRSIRAGVIWVNCYHVV 218
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PDAPFGGYKMSG GR+QGL + YL VK VIT L DSPW
Sbjct: 219 FPDAPFGGYKMSGIGREQGLDVLKNYLVVKCVITPLHDSPW 341
Score = 105 bits (223), Expect = 4e-022
Identities = 51/100 (51%), Positives = 59/100 (59%)
Frame = +1 / -1
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LT + + P S P PLILYPP GASG+ *Q T PAR D ++ L
Sbjct: 337 GESWRGVMTHLTTK*FLRTSRPCSLPIPLILYPPNGASGNTTW*QLTQITPARIDLESLL 158
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
S TIPAA PY+V L S+ SS +LN DMTGP I
Sbjct: 157 TVSIFFDTIPAAKPYIVLLPSSMASSMLLNLKMDMTGPNI 38
>gb|CF664050.1|CF664050 RTCNT1_7_A11.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_7_A11_A029 3', mRNA sequence
Length = 645
Score = 165 bits (355), Expect = 2e-040
Identities = 63/101 (62%), Positives = 78/101 (77%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFG VMS++KFKT++EVIEK N T YGL AG++TK +D+ NR+SRS+R GTVW+N Y
Sbjct: 233 IFGRVMSILKFKTIEEVIEKGNKTIYGLGAGVITKDIDIVNRISRSLRVGTVWINSYLVV 412
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
PDAP GGYKMSG GR+ G ++ YLQVK VIT L +SPW
Sbjct: 413 SPDAPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQNSPW 535
>gb|CF389302.1|CF389302 RTDR2_9_A07.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_9_A07_A021 5', mRNA
sequence
Length = 767
Score = 164 bits (353), Expect = 4e-040
Identities = 64/101 (63%), Positives = 79/101 (78%)
Frame = -2 / -1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPVMS++KFKT++EVIE+ N T YGL AGI+TK +++ANR+SRS+R GTVW+N Y A
Sbjct: 407 IFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDINIANRLSRSLRVGTVWINSYLAV 228
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D P GGYKMSG GR+ G ++ YLQVK VIT L DSPW
Sbjct: 227 GLDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPW 105
Score = 105 bits (225), Expect = 2e-022
Identities = 52/100 (52%), Positives = 59/100 (59%)
Frame = +1 / +1
Query: 298 GESGSAVMTLLTCRYLSMAASPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDRDTRL 477
GES VMT LTC+ S P+S P PLILYPP G S A+* HTVP R D ++
Sbjct: 109 GESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSRPTAR*LLIHTVPTRRDLESLF 288
Query: 478 ATSRLLVTIPAASPYLVQLAFSITSSTVLNFMRDMTGPKI 597
A LV IPA P +V SITSS VLNF D+TGP I
Sbjct: 289 AIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNI 408
>gb|DR056369.1|DR056369 RTCA1_29_G06.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_29_G06_A029 5', mRNA sequence
Length = 642
Score = 161 bits (346), Expect = 4e-039
Identities = 60/101 (59%), Positives = 79/101 (78%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV +++KFKT+DEVI++AN T YGLAAGI + ++ N +SR++R GTVWVNCYF F
Sbjct: 527 IFGPVQTILKFKTLDEVIQRANATHYGLAAGIFSNNIHTINTLSRALRVGTVWVNCYFVF 348
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSGFGR++G+ + YLQVKSV++ L + W
Sbjct: 347 DAAIPFGGYKMSGFGREKGIYCLQNYLQVKSVVSTLENPAW 225
>gb|DR056832.1|DR056832 RTCA1_32_G06.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_32_G06_A029 5', mRNA sequence
Length = 625
Score = 161 bits (346), Expect = 4e-039
Identities = 60/101 (59%), Positives = 79/101 (78%)
Frame = -2 / -2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV +++KFKT+DEVI++AN T YGLAAGI + ++ N +SR++R GTVWVNCYF F
Sbjct: 531 IFGPVQTILKFKTLDEVIQRANATHYGLAAGIFSNNIHTINTLSRALRVGTVWVNCYFVF 352
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSGFGR++G+ + YLQVKSV++ L + W
Sbjct: 351 DAAIPFGGYKMSGFGREKGIYCLQNYLQVKSVVSTLENPAW 229
>gb|DR177769.1|DR177769 RTMNUT1_7_F08.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_7_F08_A029 3', mRNA sequence
Length = 775
Score = 161 bits (346), Expect = 4e-039
Identities = 60/101 (59%), Positives = 79/101 (78%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV +++KFKT+DEVI++AN T YGLAAGI + ++ N +SR++R GTVWVNCYF F
Sbjct: 184 IFGPVQTILKFKTLDEVIQRANATHYGLAAGIFSNNIHTINTLSRALRVGTVWVNCYFVF 363
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSGFGR++G+ + YLQVKSV++ L + W
Sbjct: 364 DAAIPFGGYKMSGFGREKGIYCLQNYLQVKSVVSTLENPAW 486
>gb|DR177850.1|DR177850 RTMNUT1_7_F08.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_7_F08_A029 5', mRNA sequence
Length = 775
Score = 161 bits (346), Expect = 4e-039
Identities = 60/101 (59%), Positives = 79/101 (78%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV +++KFKT+DEVI++AN T YGLAAGI + ++ N +SR++R GTVWVNCYF F
Sbjct: 462 IFGPVQTILKFKTLDEVIQRANATHYGLAAGIFSNNIHTINTLSRALRVGTVWVNCYFVF 641
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSGFGR++G+ + YLQVKSV++ L + W
Sbjct: 642 DAAIPFGGYKMSGFGREKGIYCLQNYLQVKSVVSTLENPAW 764
>gb|BX249261.1|BX249261 BX249261 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP022A02 similar to ALDEHYDE DEHYDROGENASE,
MITOCHONDRIAL, mRNA sequence
Length = 654
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / -1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 555 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 376
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 375 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 253
>gb|BQ634345.1|BQ634345 NXRV067_G08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_G08 5' similar to Arabidopsis thaliana
sequence At1g23800 putative aldehyde dehydrogenase NAD+
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 779
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 286 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 465
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 466 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 588
>gb|CF477810.1|CF477810 RTWW3_13_G03.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_13_G03_A022 3', mRNA sequence
Length = 603
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 39 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 218
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 219 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 341
>gb|CF668401.1|CF668401 RTCNT1_36_F09.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_F09_A029 3', mRNA sequence
Length = 830
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 314 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 493
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 494 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 616
>gb|CF668484.1|CF668484 RTCNT1_36_F09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_F09_A029 5', mRNA sequence
Length = 802
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 416 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 595
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 596 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 718
>gb|CF669555.1|CF669555 RTCNT1_44_H12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_44_H12_A029 3', mRNA sequence
Length = 720
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 157 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 336
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 337 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 459
>gb|CF671734.1|CF671734 RTCNT1_59_A09.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_59_A09_A029 3', mRNA sequence
Length = 574
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 28 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 207
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 208 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 330
>gb|BX682280.2|BX682280 BX682280 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 114E05 similar to ALDEHYDE DEHYDROGENASE(EC
1.2.1.3), mRNA sequence
Length = 594
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 40 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 219
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 220 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 342
>gb|CO170424.1|CO170424 NDL1_14_C04.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_14_C04_A029 3', mRNA sequence
Length = 756
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 192 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 371
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 372 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 494
>gb|CO175447.1|CO175447 NDL1_54_G01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_54_G01_A029 5', mRNA sequence
Length = 637
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 146 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 325
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 326 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 448
>gb|CO175456.1|CO175456 NDL1_54_H01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_54_H01_A029 5', mRNA sequence
Length = 684
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 148 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 327
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 328 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 450
>gb|CO197063.1|CO197063 GEO1_3_D05.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_3_D05_A029 5', mRNA sequence
Length = 736
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / -3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 545 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 366
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 365 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 243
>gb|CO361906.1|CO361906 NDL2_7_H02.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_7_H02_A029 5', mRNA sequence
Length = 799
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / -3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 536 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 357
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 356 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 234
>gb|CO362282.1|CO362282 RTK1_2_C07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_2_C07_A029 5', mRNA sequence
Length = 823
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / -1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 538 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 359
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 358 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 236
>gb|CO369401.1|CO369401 RTK1_46_H06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_46_H06_A029 5', mRNA sequence
Length = 714
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +2
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 359 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 538
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 539 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 661
>gb|CX650671.1|CX650671 COLD1_47_G02.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_47_G02_A029 3', mRNA sequence
Length = 797
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +1
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 271 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 450
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 451 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 573
>gb|CX713282.1|CX713282 RTPQ1_8_D04.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_8_D04_A032 3', mRNA sequence
Length = 812
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 249 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 428
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 429 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 551
>gb|CX713358.1|CX713358 RTPQ1_8_D04.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_8_D04_A032 5', mRNA sequence
Length = 877
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 450 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 629
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 630 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 752
>gb|DR024478.1|DR024478 STRS1_65_F02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_65_F02_A034 3', mRNA sequence
Length = 840
Score = 160 bits (344), Expect = 8e-039
Identities = 60/101 (59%), Positives = 83/101 (82%)
Frame = -2 / +3
Query: 596 IFGPVMSLMKFKTVDEVIEKANCTRYGLAAGIVTKSLDVANRVSRSVRAGTVWVNCYFAF 417
IFGPV S++KFKT+DEVI++AN TRYGLAAG+ TK+L+ AN ++R++R GTVWVNC+ F
Sbjct: 276 IFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIF 455
Query: 416 DPDAPFGGYKMSGFGRDQGLAAMDKYLQVKSVITALPDSPW 294
D PFGGYKMSG GR++G+ +++ YLQVK+V++ L + W
Sbjct: 456 DAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAW 578
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 292,667,818
Number of Sequences: 355925
Number of extensions: 4376325
Number of successful extensions: 48309
Number of sequences better than 1.0e-020: 154
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 7978214790
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)