TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3062418.2.1
(851 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR052459.1|DR052459 RTCA1_4_F07.g1_A029 Roots minus calc... 265 8e-086
gb|DR164307.1|DR164307 RTFE1_48_D09.b1_A029 Roots minus iro... 265 8e-086
gb|DR019596.1|DR019596 STRS1_31_D05.b1_A034 Shoot tip pitch... 265 8e-086
gb|DR052378.1|DR052378 RTCA1_4_F07.b1_A029 Roots minus calc... 265 8e-086
gb|DR094103.1|DR094103 STRR1_12_B03.g1_A033 Stem Response R... 263 3e-085
gb|DR093835.1|DR093835 STRR1_10_E06.g1_A033 Stem Response R... 263 3e-085
gb|DR019640.1|DR019640 STRS1_31_H11.b1_A034 Shoot tip pitch... 265 3e-084
gb|DR019670.1|DR019670 STRS1_31_D05.g1_A034 Shoot tip pitch... 265 1e-083
gb|DR055729.1|DR055729 RTCA1_25_C02.g1_A029 Roots minus cal... 265 5e-075
gb|CF477622.1|CF477622 RTWW3_9_B03.b1_A022 Well-watered lob... 255 5e-072
gb|DR081506.1|DR081506 RTFEPL1_30_D11.b1_A029 Roots plus ad... 242 5e-068
gb|DR013586.1|DR013586 HEAT1_20_F02.b1_A029 Root at 37 C fo... 218 6e-061
gb|DR024579.1|DR024579 STRS1_66_A03.b1_A034 Shoot tip pitch... 216 6e-060
gb|CO169436.1|CO169436 NDL1_7_C03.b1_A029 Needles control P... 182 8e-056
gb|DR094032.1|DR094032 STRR1_12_B03.b1_A033 Stem Response R... 178 1e-054
gb|CX652294.1|CX652294 COLD1_58_E05.b1_A029 Root cold Pinus... 187 1e-051
gb|DR111231.1|DR111231 RTS1_16_F03.b1_A029 Roots minus sulf... 177 1e-048
gb|AW010487.1|AW010487 ST07D06 Pine TriplEx shoot tip libra... 92 3e-048
gb|DR019869.1|DR019869 STRS1_33_B04.b1_A034 Shoot tip pitch... 82 5e-045
gb|CX652380.1|CX652380 COLD1_58_E05.g1_A029 Root cold Pinus... 120 3e-041
gb|DR095084.1|DR095084 STRR1_18_E04.g1_A033 Stem Response R... 85 4e-040
gb|AF072736.1|AF072736 Pinus contorta beta-glucosidase mRNA... 83 4e-040
gb|DR690593.1|DR690593 EST1080679 Normalized pine embryo li... 71 7e-040
gb|CO369254.1|CO369254 RTK1_46_A07.b1_A029 Roots minus pota... 77 1e-038
gb|CO369338.1|CO369338 RTK1_46_A07.g1_A029 Roots minus pota... 77 1e-038
gb|CO164776.1|CO164776 FLD1_50_F04.b1_A029 Root flooded Pin... 82 9e-038
gb|CX712929.1|CX712929 RTPQ1_5_F12.g1_A032 Roots treated wi... 83 1e-036
gb|DR110861.1|DR110861 RTS1_13_B02.g1_A029 Roots minus sulf... 136 1e-036
dbj|BD224353.1| Materials and methods for the modification ... 93 2e-035
dbj|BD224416.1| Materials and methods for the modification ... 93 2e-035
gb|DR020312.1|DR020312 STRS1_36_C01.b1_A034 Shoot tip pitch... 80 2e-035
gb|DR048711.1|DR048711 RTBOR1_10_E10.g1_A029 Roots plus add... 100 3e-035
gb|BX681734.1|BX681734 BX681734 RS Pinus pinaster cDNA clon... 108 1e-033
gb|CO199421.1|CO199421 GEO2_1_C06.b1_A032 Root gravitropism... 79 2e-032
gb|DR014803.1|DR014803 HEAT1_51_E12.g1_A029 Root at 37 C fo... 83 5e-032
gb|BX250956.1|BX250956 BX250956 Pinus pinaster differenciat... 82 1e-031
gb|BG039942.1|BG039942 NXSI_101_H03_F NXSI (Nsf Xylem Side ... 67 1e-031
gb|CO361958.1|CO361958 NDL2_8_E08.b1_A029 Needles control 2... 89 1e-029
gb|DR080921.1|DR080921 RTFEPL1_26_D08.b1_A029 Roots plus ad... 83 3e-029
gb|CO162371.1|CO162371 FLD1_34_H05.g1_A029 Root flooded Pin... 83 5e-029
gb|CO162557.1|CO162557 FLD1_36_C02.b1_A029 Root flooded Pin... 75 6e-029
gb|CF390062.1|CF390062 RTDR2_12_E07.b1_A021 Loblolly pine r... 73 2e-028
gb|AW042637.1|AW042637 ST24C01 Pine TriplEx shoot tip libra... 80 7e-028
gb|CX652916.1|CX652916 COLD1_62_F11.b1_A029 Root cold Pinus... 85 2e-027
gb|BX254352.1|BX254352 BX254352 Pinus pinaster differenciat... 67 2e-027
gb|CX646974.1|CX646974 COLD1_12_D12.g1_A029 Root cold Pinus... 71 4e-027
gb|CF668848.1|CF668848 RTCNT1_39_C01.b1_A029 Root control P... 83 4e-027
gb|DR013536.1|DR013536 HEAT1_19_H11.g1_A029 Root at 37 C fo... 77 1e-025
gb|CF390726.1|CF390726 RTDR2_17_D05.g1_A021 Loblolly pine r... 87 3e-025
gb|DR744663.1|DR744663 RTCU1_24_B09.b1_A029 Roots plus adde... 77 3e-025
gb|BX679902.1|BX679902 BX679902 RS Pinus pinaster cDNA clon... 82 4e-025
gb|CO158039.1|CO158039 FLD1_4_C03.b1_A029 Root flooded Pinu... 81 6e-025
gb|DR743165.1|DR743165 RTCU1_14_B08.b1_A029 Roots plus adde... 67 2e-024
gb|DR091853.1|DR091853 RTAL1_24_A01.g1_A029 Roots plus adde... 76 3e-024
gb|DT636173.1|DT636173 EST1151104 Normalized pine embryo li... 64 4e-024
gb|DR387566.1|DR387566 RTHG1_22_E08.g2_A029 Roots plus adde... 64 4e-024
gb|DR385366.1|DR385366 RTHG1_8_F01.b1_A029 Roots plus added... 77 5e-024
gb|CO162287.1|CO162287 FLD1_34_H05.b1_A029 Root flooded Pin... 55 1e-023
gb|DR055655.1|DR055655 RTCA1_25_C02.b1_A029 Roots minus cal... 74 1e-023
gb|CX650807.1|CX650807 COLD1_48_F06.b1_A029 Root cold Pinus... 74 2e-023
gb|DR685831.1|DR685831 EST1075908 Normalized pine embryo li... 55 2e-023
gb|DR048637.1|DR048637 RTBOR1_10_E10.b1_A029 Roots plus add... 100 2e-023
gb|BM133460.1|BM133460 NXLV_006_G10_F NXLV (Nsf Xylem Late ... 107 1e-022
gb|CF390174.1|CF390174 RTDR2_12_E07.g1_A021 Loblolly pine r... 52 3e-022
gb|DR078735.1|DR078735 RTFEPL1_6_C01.g1_A029 Roots plus add... 87 6e-022
gb|DR078654.1|DR078654 RTFEPL1_6_C01.b1_A029 Roots plus add... 87 6e-022
gb|DR019714.1|DR019714 STRS1_31_H11.g1_A034 Shoot tip pitch... 67 2e-021
gb|CX646890.1|CX646890 COLD1_12_D12.b1_A029 Root cold Pinus... 71 2e-021
>gb|DR052459.1|DR052459 RTCA1_4_F07.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_4_F07_A029 5', mRNA sequence
Length = 932
Score = 265 bits (573), Expect(4) = 8e-086
Identities = 102/168 (60%), Positives = 126/168 (75%)
Frame = +1 / +1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 328 PKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 507
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK
Sbjct: 508 RANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKS 687
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL L A++DGA+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 688 YLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 831
Score = 154 bits (330), Expect(2) = 6e-040
Identities = 88/166 (53%), Positives = 96/166 (57%)
Frame = -1 / -1
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 824 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 645
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 644 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 465
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
QS * V FC + * AVY L P *S EPLT CS VNLG
Sbjct: 464 FQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLG 327
Score = 81.7 bits (172), Expect(3) = 3e-022
Identities = 35/115 (30%), Positives = 69/115 (60%)
Frame = -3 / -3
Query: 630 LGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQ 451
L +++ ++ SK V+ LPL+++++RP +V+ H+ VI Q+ ++AF+ ++P G++Q
Sbjct: 831 LQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQILQIAFIVVNPDGIIQ 652
Query: 450 VLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAV 286
VS ++HS+ + WISI+ + V +VKP+ +R WS+R ++
Sbjct: 651 SCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGVRPWSNRHSI 487
Score = 50.6 bits (104), Expect(4) = 8e-086
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NS+EDQ AAQR+RDFH+GWF P+
Sbjct: 205 NSSEDQGAAQRSRDFHIGWFLHPI 276
Score = 36.8 bits (74), Expect(4) = 8e-086
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 826 LKRYPKMSAYWFSKLLQRH 882
Score = 32.7 bits (65), Expect(3) = 3e-022
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3 / -3
Query: 264 LPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLRSKLG 127
+P+ V +L F +HV S VL++ ++ * + L L KLG
Sbjct: 465 IPVHLVVCYILFRLFRIIHVISSVLVNA*IVY*TFNHLGLFLCKLG 328
Score = 30.9 bits (61), Expect(2) = 6e-040
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 67 ISKPTNMEIPCSLSRCLV 14
+ KP+NMEIP SLSR LV
Sbjct: 270 MEKPSNMEIP*SLSRSLV 217
Score = 28.6 bits (56), Expect(3) = 3e-022
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 69 GSANQPTWKSXXXXXXAWSSVEF 1
G N P WKS WSS+EF
Sbjct: 272 GWRNHPIWKSLDL*AAPWSSLEF 204
Score = 23.1 bits (44), Expect(4) = 8e-086
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M +IV RLP+
Sbjct: 283 GKYPDSMVEIVGTRLPK 333
>gb|DR164307.1|DR164307 RTFE1_48_D09.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_48_D09_A029 3', mRNA sequence
Length = 868
Score = 265 bits (573), Expect(4) = 8e-086
Identities = 102/168 (60%), Positives = 126/168 (75%)
Frame = +1 / +3
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 198 PKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 377
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK
Sbjct: 378 RANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKS 557
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL L A++DGA+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 558 YLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 701
Score = 154 bits (330), Expect(2) = 6e-040
Identities = 88/166 (53%), Positives = 96/166 (57%)
Frame = -1 / -1
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 694 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 515
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 514 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 335
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
QS * V FC + * AVY L P *S EPLT CS VNLG
Sbjct: 334 FQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLG 197
Score = 81.7 bits (172), Expect(3) = 3e-022
Identities = 35/115 (30%), Positives = 69/115 (60%)
Frame = -3 / -3
Query: 630 LGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQ 451
L +++ ++ SK V+ LPL+++++RP +V+ H+ VI Q+ ++AF+ ++P G++Q
Sbjct: 701 LQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQILQIAFIVVNPDGIIQ 522
Query: 450 VLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAV 286
VS ++HS+ + WISI+ + V +VKP+ +R WS+R ++
Sbjct: 521 SCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGVRPWSNRHSI 357
Score = 50.6 bits (104), Expect(4) = 8e-086
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +3
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NS+EDQ AAQR+RDFH+GWF P+
Sbjct: 75 NSSEDQGAAQRSRDFHIGWFLHPI 146
Score = 36.8 bits (74), Expect(4) = 8e-086
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +3
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 696 LKRYPKMSAYWFSKLLQRH 752
Score = 32.7 bits (65), Expect(3) = 3e-022
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3 / -3
Query: 264 LPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLRSKLG 127
+P+ V +L F +HV S VL++ ++ * + L L KLG
Sbjct: 335 IPVHLVVCYILFRLFRIIHVISSVLVNA*IVY*TFNHLGLFLCKLG 198
Score = 30.9 bits (61), Expect(2) = 6e-040
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 67 ISKPTNMEIPCSLSRCLV 14
+ KP+NMEIP SLSR LV
Sbjct: 140 MEKPSNMEIP*SLSRSLV 87
Score = 28.6 bits (56), Expect(3) = 3e-022
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3 / -1
Query: 69 GSANQPTWKSXXXXXXAWSSVEF 1
G N P WKS WSS+EF
Sbjct: 142 GWRNHPIWKSLDL*AAPWSSLEF 74
Score = 23.1 bits (44), Expect(4) = 8e-086
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / +3
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M +IV RLP+
Sbjct: 153 GKYPDSMVEIVGTRLPK 203
>gb|DR019596.1|DR019596 STRS1_31_D05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_D05_A034 3', mRNA sequence
Length = 865
Score = 265 bits (573), Expect(4) = 8e-086
Identities = 102/168 (60%), Positives = 126/168 (75%)
Frame = +1 / -1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 673 PKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 494
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK
Sbjct: 493 RANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKS 314
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL L A++DGA+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 313 YLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 170
Score = 154 bits (330), Expect(2) = 6e-040
Identities = 88/166 (53%), Positives = 96/166 (57%)
Frame = -1 / +3
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 177 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 356
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 357 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 536
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
QS * V FC + * AVY L P *S EPLT CS VNLG
Sbjct: 537 FQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLG 674
Score = 81.7 bits (172), Expect(3) = 3e-022
Identities = 35/115 (30%), Positives = 69/115 (60%)
Frame = -3 / +2
Query: 630 LGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQ 451
L +++ ++ SK V+ LPL+++++RP +V+ H+ VI Q+ ++AF+ ++P G++Q
Sbjct: 170 LQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQILQIAFIVVNPDGIIQ 349
Query: 450 VLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAV 286
VS ++HS+ + WISI+ + V +VKP+ +R WS+R ++
Sbjct: 350 SCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGVRPWSNRHSI 514
Score = 50.6 bits (104), Expect(4) = 8e-086
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NS+EDQ AAQR+RDFH+GWF P+
Sbjct: 796 NSSEDQGAAQRSRDFHIGWFLHPI 725
Score = 36.8 bits (74), Expect(4) = 8e-086
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / -1
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 175 LKRYPKMSAYWFSKLLQRH 119
Score = 32.7 bits (65), Expect(3) = 3e-022
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3 / +2
Query: 264 LPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLRSKLG 127
+P+ V +L F +HV S VL++ ++ * + L L KLG
Sbjct: 536 IPVHLVVCYILFRLFRIIHVISSVLVNA*IVY*TFNHLGLFLCKLG 673
Score = 30.9 bits (61), Expect(2) = 6e-040
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +2
Query: 67 ISKPTNMEIPCSLSRCLV 14
+ KP+NMEIP SLSR LV
Sbjct: 731 MEKPSNMEIP*SLSRSLV 784
Score = 28.6 bits (56), Expect(3) = 3e-022
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3 / +3
Query: 69 GSANQPTWKSXXXXXXAWSSVEF 1
G N P WKS WSS+EF
Sbjct: 729 GWRNHPIWKSLDL*AAPWSSLEF 797
Score = 23.1 bits (44), Expect(4) = 8e-086
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / -1
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M +IV RLP+
Sbjct: 718 GKYPDSMVEIVGTRLPK 668
>gb|DR052378.1|DR052378 RTCA1_4_F07.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_4_F07_A029 3', mRNA sequence
Length = 865
Score = 265 bits (573), Expect(4) = 8e-086
Identities = 102/168 (60%), Positives = 126/168 (75%)
Frame = +1 / +1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 187 PKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 366
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK
Sbjct: 367 RANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKS 546
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL L A++DGA+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 547 YLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 690
Score = 154 bits (330), Expect(2) = 6e-040
Identities = 88/166 (53%), Positives = 96/166 (57%)
Frame = -1 / -3
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 683 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 504
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 503 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 324
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
QS * V FC + * AVY L P *S EPLT CS VNLG
Sbjct: 323 FQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLG 186
Score = 81.7 bits (172), Expect(3) = 3e-022
Identities = 35/115 (30%), Positives = 69/115 (60%)
Frame = -3 / -2
Query: 630 LGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQ 451
L +++ ++ SK V+ LPL+++++RP +V+ H+ VI Q+ ++AF+ ++P G++Q
Sbjct: 690 LQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQILQIAFIVVNPDGIIQ 511
Query: 450 VLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAV 286
VS ++HS+ + WISI+ + V +VKP+ +R WS+R ++
Sbjct: 510 SCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGVRPWSNRHSI 346
Score = 50.6 bits (104), Expect(4) = 8e-086
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NS+EDQ AAQR+RDFH+GWF P+
Sbjct: 64 NSSEDQGAAQRSRDFHIGWFLHPI 135
Score = 36.8 bits (74), Expect(4) = 8e-086
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 685 LKRYPKMSAYWFSKLLQRH 741
Score = 32.7 bits (65), Expect(3) = 3e-022
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3 / -2
Query: 264 LPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLRSKLG 127
+P+ V +L F +HV S VL++ ++ * + L L KLG
Sbjct: 324 IPVHLVVCYILFRLFRIIHVISSVLVNA*IVY*TFNHLGLFLCKLG 187
Score = 30.9 bits (61), Expect(2) = 6e-040
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 67 ISKPTNMEIPCSLSRCLV 14
+ KP+NMEIP SLSR LV
Sbjct: 129 MEKPSNMEIP*SLSRSLV 76
Score = 28.6 bits (56), Expect(3) = 3e-022
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3 / -3
Query: 69 GSANQPTWKSXXXXXXAWSSVEF 1
G N P WKS WSS+EF
Sbjct: 131 GWRNHPIWKSLDL*AAPWSSLEF 63
Score = 23.1 bits (44), Expect(4) = 8e-086
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M +IV RLP+
Sbjct: 142 GKYPDSMVEIVGTRLPK 192
>gb|DR094103.1|DR094103 STRR1_12_B03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_B03_A033 5', mRNA sequence
Length = 864
Score = 263 bits (569), Expect(4) = 3e-085
Identities = 101/168 (60%), Positives = 126/168 (75%)
Frame = +1 / -1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT +Q+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 621 PKFTKKQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 442
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK
Sbjct: 441 RANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKS 262
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL L A++DGA+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 261 YLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 118
Score = 151 bits (324), Expect(2) = 4e-039
Identities = 87/166 (52%), Positives = 95/166 (57%)
Frame = -1 / +2
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 125 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 304
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 305 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 484
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
QS * V FC + * AVY L P *S EPLT C VNLG
Sbjct: 485 FQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPLTIWDCFFVNLG 622
Score = 81.7 bits (172), Expect(3) = 3e-022
Identities = 35/115 (30%), Positives = 69/115 (60%)
Frame = -3 / +1
Query: 630 LGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQ 451
L +++ ++ SK V+ LPL+++++RP +V+ H+ VI Q+ ++AF+ ++P G++Q
Sbjct: 118 LQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQILQIAFIVVNPDGIIQ 297
Query: 450 VLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAV 286
VS ++HS+ + WISI+ + V +VKP+ +R WS+R ++
Sbjct: 298 SCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGVRPWSNRHSI 462
Score = 50.6 bits (104), Expect(4) = 3e-085
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NS+EDQ AAQR+RDFH+GWF P+
Sbjct: 744 NSSEDQGAAQRSRDFHIGWFLHPI 673
Score = 36.8 bits (74), Expect(4) = 3e-085
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / -1
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 123 LKRYPKMSAYWFSKLLQRH 67
Score = 32.7 bits (65), Expect(3) = 3e-022
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3 / +1
Query: 264 LPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLRSKLG 127
+P+ V +L F +HV S VL++ ++ * + L L KLG
Sbjct: 484 IPVHLVVCYILFRLFRIIHVISSVLVNA*IVY*TFNHLGLFLCKLG 621
Score = 30.9 bits (61), Expect(2) = 4e-039
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +1
Query: 67 ISKPTNMEIPCSLSRCLV 14
+ KP+NMEIP SLSR LV
Sbjct: 679 MEKPSNMEIP*SLSRSLV 732
Score = 28.6 bits (56), Expect(3) = 3e-022
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3 / +2
Query: 69 GSANQPTWKSXXXXXXAWSSVEF 1
G N P WKS WSS+EF
Sbjct: 677 GWRNHPIWKSLDL*AAPWSSLEF 745
Score = 23.1 bits (44), Expect(4) = 3e-085
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / -1
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M +IV RLP+
Sbjct: 666 GKYPDSMVEIVGTRLPK 616
>gb|DR093835.1|DR093835 STRR1_10_E06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_10_E06_A033 5', mRNA sequence
Length = 788
Score = 263 bits (569), Expect(4) = 3e-085
Identities = 101/168 (60%), Positives = 126/168 (75%)
Frame = +1 / -1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT +Q+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 662 PKFTKKQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 483
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK
Sbjct: 482 RANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKS 303
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL L A++DGA+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 302 YLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 159
Score = 151 bits (324), Expect(2) = 4e-039
Identities = 87/166 (52%), Positives = 95/166 (57%)
Frame = -1 / +1
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 166 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 345
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 346 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 525
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
QS * V FC + * AVY L P *S EPLT C VNLG
Sbjct: 526 FQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPLTIWDCFFVNLG 663
Score = 81.7 bits (172), Expect(3) = 3e-022
Identities = 35/115 (30%), Positives = 69/115 (60%)
Frame = -3 / +3
Query: 630 LGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQ 451
L +++ ++ SK V+ LPL+++++RP +V+ H+ VI Q+ ++AF+ ++P G++Q
Sbjct: 159 LQSSKIHINHSKS*GVSGLPLKIIQQRPCKVSHHICPVIHCINQILQIAFIVVNPDGIIQ 338
Query: 450 VLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAV 286
VS ++HS+ + WISI+ + V +VKP+ +R WS+R ++
Sbjct: 339 SCWKCHVSRVVHSIFRENHSWISIVFFYVCDGLV*TPRHNVKPIGVRPWSNRHSI 503
Score = 50.6 bits (104), Expect(4) = 3e-085
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NS+EDQ AAQR+RDFH+GWF P+
Sbjct: 785 NSSEDQGAAQRSRDFHIGWFLHPI 714
Score = 36.8 bits (74), Expect(4) = 3e-085
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / -1
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 164 LKRYPKMSAYWFSKLLQRH 108
Score = 32.7 bits (65), Expect(3) = 3e-022
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3 / +3
Query: 264 LPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLRSKLG 127
+P+ V +L F +HV S VL++ ++ * + L L KLG
Sbjct: 525 IPVHLVVCYILFRLFRIIHVISSVLVNA*IVY*TFNHLGLFLCKLG 662
Score = 30.9 bits (61), Expect(2) = 4e-039
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 67 ISKPTNMEIPCSLSRCLV 14
+ KP+NMEIP SLSR LV
Sbjct: 720 MEKPSNMEIP*SLSRSLV 773
Score = 28.6 bits (56), Expect(3) = 3e-022
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3 / +1
Query: 69 GSANQPTWKSXXXXXXAWSSVEF 1
G N P WKS WSS+EF
Sbjct: 718 GWRNHPIWKSLDL*AAPWSSLEF 786
Score = 23.1 bits (44), Expect(4) = 3e-085
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / -1
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M +IV RLP+
Sbjct: 707 GKYPDSMVEIVGTRLPK 657
>gb|DR019640.1|DR019640 STRS1_31_H11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_H11_A034 3', mRNA sequence
Length = 794
Score = 265 bits (573), Expect(4) = 3e-084
Identities = 102/168 (60%), Positives = 126/168 (75%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 116 PKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 295
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK
Sbjct: 296 RANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKS 475
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL L A++DGA+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 476 YLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 619
Score = 154 bits (330), Expect(2) = 6e-040
Identities = 88/166 (53%), Positives = 96/166 (57%)
Frame = -1 / -3
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 612 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 433
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 432 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 253
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
QS * V FC + * AVY L P *S EPLT CS VNLG
Sbjct: 252 FQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLG 115
Score = 45.5 bits (93), Expect(4) = 3e-084
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2 / +2
Query: 11 EDQAAAQRARDFHVGWFADPL 73
EDQ AAQR+RDFH+GWF P+
Sbjct: 2 EDQGAAQRSRDFHIGWFLHPI 64
Score = 36.8 bits (74), Expect(4) = 3e-084
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +2
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 614 LKRYPKMSAYWFSKLLQRH 670
Score = 30.9 bits (61), Expect(2) = 6e-040
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 67 ISKPTNMEIPCSLSRCLV 14
+ KP+NMEIP SLSR LV
Sbjct: 58 MEKPSNMEIP*SLSRSLV 5
Score = 23.1 bits (44), Expect(4) = 3e-084
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M +IV RLP+
Sbjct: 71 GKYPDSMVEIVGTRLPK 121
>gb|DR019670.1|DR019670 STRS1_31_D05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_D05_A034 5', mRNA sequence
Length = 756
Score = 265 bits (573), Expect(4) = 1e-083
Identities = 102/168 (60%), Positives = 126/168 (75%)
Frame = +1 / -1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 645 PKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 466
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK
Sbjct: 465 RANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKS 286
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL L A++DGA+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 285 YLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 142
Score = 154 bits (330), Expect(2) = 6e-040
Identities = 88/166 (53%), Positives = 96/166 (57%)
Frame = -1 / +2
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 149 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 328
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 329 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 508
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
QS * V FC + * AVY L P *S EPLT CS VNLG
Sbjct: 509 FQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLG 646
Score = 43.2 bits (88), Expect(4) = 1e-083
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2 / -1
Query: 14 DQAAAQRARDFHVGWFADPL 73
DQ AAQR+RDFH+GWF P+
Sbjct: 756 DQGAAQRSRDFHIGWFLHPI 697
Score = 36.8 bits (74), Expect(4) = 1e-083
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / -1
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 147 LKRYPKMSAYWFSKLLQRH 91
Score = 30.9 bits (61), Expect(2) = 6e-040
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +1
Query: 67 ISKPTNMEIPCSLSRCLV 14
+ KP+NMEIP SLSR LV
Sbjct: 703 MEKPSNMEIP*SLSRSLV 756
Score = 23.1 bits (44), Expect(4) = 1e-083
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / -1
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M +IV RLP+
Sbjct: 690 GKYPDSMVEIVGTRLPK 640
>gb|DR055729.1|DR055729 RTCA1_25_C02.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_25_C02_A029 5', mRNA sequence
Length = 687
Score = 265 bits (573), Expect(2) = 5e-075
Identities = 102/168 (60%), Positives = 126/168 (75%)
Frame = +1 / -3
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 646 PKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 467
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK
Sbjct: 466 RANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKS 287
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL L A++DGA+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 286 YLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 143
Score = 154 bits (330), Expect = 1e-036
Identities = 88/166 (53%), Positives = 96/166 (57%)
Frame = -1 / +3
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 150 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 329
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 330 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 509
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
QS * V FC + * AVY L P *S EPLT CS VNLG
Sbjct: 510 FQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLG 647
Score = 36.8 bits (74), Expect(2) = 5e-075
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / -3
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 148 LKRYPKMSAYWFSKLLQRH 92
>gb|CF477622.1|CF477622 RTWW3_9_B03.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_9_B03_A022 3', mRNA sequence
Length = 667
Score = 255 bits (551), Expect(2) = 5e-072
Identities = 98/163 (60%), Positives = 122/163 (74%)
Frame = +1 / +1
Query: 142 EQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSK 321
EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP+ANS
Sbjct: 4 EQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSN 183
Query: 322 WLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAEL 501
WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK YL L
Sbjct: 184 WLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNL 363
Query: 502 RKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
A++DGA+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 364 INAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 492
Score = 146 bits (313), Expect = 2e-034
Identities = 84/161 (52%), Positives = 92/161 (57%)
Frame = -1 / -3
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 485 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 306
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 305 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 126
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACS 141
QS * V FC + * AVY L P *S EPLT CS
Sbjct: 125 FQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPLTIWDCS 3
Score = 36.8 bits (74), Expect(2) = 5e-072
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 487 LKRYPKMSAYWFSKLLQRH 543
>gb|DR081506.1|DR081506 RTFEPL1_30_D11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_30_D11_A029 3', mRNA sequence
Length = 761
Score = 242 bits (522), Expect(2) = 5e-068
Identities = 93/155 (60%), Positives = 114/155 (73%)
Frame = +1 / +2
Query: 166 SADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEG 345
S DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP+ANS WLYIVP G
Sbjct: 2 SIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWG 181
Query: 346 MYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGA 525
+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK YL L A++DGA
Sbjct: 182 LYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGA 361
Query: 526 DVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 362 NVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 466
Score = 136 bits (291), Expect = 2e-031
Identities = 79/153 (51%), Positives = 87/153 (56%)
Frame = -1 / -3
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 459 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 280
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 279 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 100
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAE 165
QS * V FC + * AVY L P *S E
Sbjct: 99 FQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIE 1
Score = 36.8 bits (74), Expect(2) = 5e-068
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +2
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 461 LKRYPKMSAYWFSKLLQRH 517
>gb|DR013586.1|DR013586 HEAT1_20_F02.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_20_F02_A029 3', mRNA sequence
Length = 740
Score = 218 bits (470), Expect(2) = 6e-061
Identities = 84/142 (59%), Positives = 103/142 (72%)
Frame = +1 / +1
Query: 205 YVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYG 384
Y+ K +Q T Y DW + RNG PIGP+ANS WLYIVP G+Y V Y+K YG
Sbjct: 1 YMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYG 180
Query: 385 NPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDN 564
NPT+ ++ENGMD PGN+T L+DT RV +YK YL L A++DGA+V GYFAWSLLDN
Sbjct: 181 NPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDN 360
Query: 565 FEWQSGYTSKFGIVYVDFSTPK 630
FEW+SGYTS+FG+VYVDF+T K
Sbjct: 361 FEWKSGYTSRFGVVYVDFTTLK 426
Score = 126 bits (269), Expect = 3e-028
Identities = 70/131 (53%), Positives = 77/131 (58%)
Frame = -1 / -1
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 419 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 240
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 239 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 60
Query: 263 CQSAE*LVGFC 231
QS * V FC
Sbjct: 59 FQSIW*SVTFC 27
Score = 36.8 bits (74), Expect(2) = 6e-061
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 421 LKRYPKMSAYWFSKLLQRH 477
>gb|DR024579.1|DR024579 STRS1_66_A03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_66_A03_A034 3', mRNA sequence
Length = 605
Score = 216 bits (467), Expect(2) = 6e-060
Identities = 82/134 (61%), Positives = 100/134 (74%)
Frame = +1 / +2
Query: 229 QQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITE 408
+Q T Y DW + RNG PIGP+ANS WLYIVP G+Y V Y+K YGNPT+ ++E
Sbjct: 23 KQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSE 202
Query: 409 NGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYT 588
NGMD PGN+T L+DT RV +YK YL L A++DGA+V GYFAWSLLDNFEW+SGYT
Sbjct: 203 NGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYT 382
Query: 589 SKFGIVYVDFSTPK 630
S+FG+VYVDF+T K
Sbjct: 383 SRFGVVYVDFTTRK 424
Score = 126 bits (269), Expect = 3e-028
Identities = 70/131 (53%), Positives = 77/131 (58%)
Frame = -1 / -3
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 417 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 238
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P R+
Sbjct: 237 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPLRAYAKPV 58
Query: 263 CQSAE*LVGFC 231
QS * V FC
Sbjct: 57 FQSIW*SVTFC 25
Score = 35.0 bits (70), Expect(2) = 6e-060
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1 / +2
Query: 634 ERHPKASAYWFRDMLQKH 687
+R+PK SAYWF +LQ+H
Sbjct: 422 KRYPKMSAYWFSKLLQRH 475
>gb|CO169436.1|CO169436 NDL1_7_C03.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_C03_A029 3', mRNA sequence
Length = 795
Score = 182 bits (393), Expect(3) = 8e-056
Identities = 71/130 (54%), Positives = 90/130 (69%)
Frame = +1 / -2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 392 PKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 213
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK
Sbjct: 212 RANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKS 33
Query: 487 YLAELRKAID 516
YL L A++
Sbjct: 32 YLQNLINAVN 3
Score = 102 bits (218), Expect(2) = 1e-024
Identities = 64/131 (48%), Positives = 69/131 (52%)
Frame = -1 / +1
Query: 518 SSMAFLSSAR*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPS 339
S A + +* L* TL+VS V FPG SIPFS VGFP F T Y P
Sbjct: 1 SFTALIKFCK*LL**LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQ 180
Query: 338 GTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPL 159
GTM*S EFA GPIG P R+ QS * V FC + * AVY L P *S EPL
Sbjct: 181 GTM*SQLEFALGPIGTPLRAYAKPVFQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPL 360
Query: 158 TNLACSGVNLG 126
T CS VNLG
Sbjct: 361 TIWDCSFVNLG 393
Score = 50.6 bits (104), Expect(3) = 8e-056
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NS+EDQ AAQR+RDFH+GWF P+
Sbjct: 515 NSSEDQGAAQRSRDFHIGWFLHPI 444
Score = 30.9 bits (61), Expect(2) = 1e-024
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 67 ISKPTNMEIPCSLSRCLV 14
+ KP+NMEIP SLSR LV
Sbjct: 450 MEKPSNMEIP*SLSRSLV 503
Score = 23.1 bits (44), Expect(3) = 8e-056
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / -2
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M +IV RLP+
Sbjct: 437 GKYPDSMVEIVGTRLPK 387
>gb|DR094032.1|DR094032 STRR1_12_B03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_B03_A033 3', mRNA sequence
Length = 910
Score = 178 bits (384), Expect(3) = 1e-054
Identities = 69/125 (55%), Positives = 87/125 (69%)
Frame = +1 / -2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT +Q+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 381 PKFTKKQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 202
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK
Sbjct: 201 RANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKS 22
Query: 487 YLAEL 501
YL L
Sbjct: 21 YLQNL 7
Score = 97.7 bits (207), Expect(2) = 3e-023
Identities = 58/115 (50%), Positives = 61/115 (53%)
Frame = -1 / +2
Query: 470 TLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGL 291
TL+VS V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG
Sbjct: 38 TLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGT 217
Query: 290 PFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
P R+ QS * V FC + * AVY L P *S EPLT C VNLG
Sbjct: 218 PLRAYAKPVFQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPLTIWDCFFVNLG 382
Score = 50.6 bits (104), Expect(3) = 1e-054
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NS+EDQ AAQR+RDFH+GWF P+
Sbjct: 504 NSSEDQGAAQRSRDFHIGWFLHPI 433
Score = 30.9 bits (61), Expect(2) = 3e-023
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +1
Query: 67 ISKPTNMEIPCSLSRCLV 14
+ KP+NMEIP SLSR LV
Sbjct: 439 MEKPSNMEIP*SLSRSLV 492
Score = 23.1 bits (44), Expect(3) = 1e-054
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / -2
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M +IV RLP+
Sbjct: 426 GKYPDSMVEIVGTRLPK 376
>gb|CX652294.1|CX652294 COLD1_58_E05.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_58_E05_A029 3', mRNA sequence
Length = 502
Score = 187 bits (403), Expect(2) = 1e-051
Identities = 71/109 (65%), Positives = 87/109 (79%)
Frame = +1 / +3
Query: 304 PQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYK 483
P+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK
Sbjct: 3 PRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYK 182
Query: 484 GYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL L A++DGA+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 183 SYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 329
Score = 107 bits (229), Expect = 9e-023
Identities = 59/107 (55%), Positives = 65/107 (60%)
Frame = -1 / -1
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
V+KST*T PNL+V PD HSKLS +D AK P T APS A + +* L* TL+VS
Sbjct: 322 VVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL**LTLMVSFSPA 143
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACG 303
V FPG SIPFS VGFP F T Y P GTM*S EFA G
Sbjct: 142 GSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALG 2
Score = 36.8 bits (74), Expect(2) = 1e-051
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +3
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 324 LKRYPKMSAYWFSKLLQRH 380
>gb|DR111231.1|DR111231 RTS1_16_F03.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_F03_A029 3', mRNA sequence
Length = 628
Score = 177 bits (381), Expect(2) = 1e-048
Identities = 67/103 (65%), Positives = 82/103 (79%)
Frame = +1 / +3
Query: 322 WLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAEL 501
WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T L+DT RV +YK YL L
Sbjct: 6 WLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNL 185
Query: 502 RKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
A++DGA+V GYFAWSLLDNFEW+SGYTS+FG+VYVDF+T K
Sbjct: 186 INAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLK 314
Score = 36.8 bits (74), Expect(2) = 1e-048
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +3
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 309 LKRYPKMSAYWFSKLLQRH 365
>gb|AW010487.1|AW010487 ST07D06 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST07D06, mRNA sequence
Length = 811
Score = 91.8 bits (194), Expect(4) = 3e-048
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = +1 / +1
Query: 289 GKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLT 438
G PIGP+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD PGN+T
Sbjct: 277 GVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 426
Score = 73.9 bits (155), Expect(4) = 3e-048
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +1 / +3
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNG 291
PKFT EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG
Sbjct: 114 PKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNG 278
Score = 63.4 bits (132), Expect(3) = 2e-021
Identities = 31/53 (58%), Positives = 31/53 (58%)
Frame = -1 / -3
Query: 437 VKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRS 279
V FPG SIPFS VGFP F T Y P GTM*S EFA GPIG P S
Sbjct: 425 VTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGPIGTPIAS 267
Score = 48.3 bits (99), Expect(4) = 3e-048
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +2 / +2
Query: 14 DQAAAQRARDFHVGWFADPLNKWTLSTDNARYCEREAA 127
DQ AAQR++DFH+GWF P+ W +S C +AA
Sbjct: 2 DQGAAQRSKDFHIGWFLHPIT*WEISWFYGGNCWDKAA 115
Score = 43.7 bits (89), Expect(3) = 2e-021
Identities = 27/56 (48%), Positives = 29/56 (51%)
Frame = -1 / -1
Query: 293 LPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
LP R+ QS * V FC + * AVY L P *S EPLT CS VNLG
Sbjct: 280 LPLRAYAKPVFQSIW*SVTFCLGCLGSYM**AVYWLTPR*SIEPLTIWDCSFVNLG 113
Score = 35.0 bits (70), Expect(4) = 3e-048
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 535 GYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
GY LL FEW+S Y + G+ YV F
Sbjct: 527 GYLHGPLLGKFEWESRYXPRVGVGYVGF 610
Score = 32.7 bits (65), Expect(3) = 2e-021
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -1
Query: 127 GSLSFTISCIICG*CPFI*WISKPTNMEIPCSLSRCLV 14
GSL TIS I G P + KP+NMEI SLSR LV
Sbjct: 115 GSLVPTISTIEPGYFPLGNRMEKPSNMEIL*SLSRSLV 2
>gb|DR019869.1|DR019869 STRS1_33_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_33_B04_A034 3', mRNA sequence
Length = 868
Score = 81.7 bits (172), Expect(5) = 5e-045
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +1 / +2
Query: 283 RNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNL 435
+NG+ IG +A+S WLYIVP G+ +NY+K +Y NP V ITENGMD P N+
Sbjct: 269 KNGRAIGDKASSAWLYIVPHGIRSLMNYIKRRYNNPPVIITENGMDDPNNI 421
Score = 68.4 bits (143), Expect(5) = 5e-045
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +1 / +2
Query: 514 DDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+DG +V GYF WSLLDN+EW +GYTS+FG+ +VD+
Sbjct: 509 EDGCNVGGYFVWSLLDNWEWAAGYTSRFGLYFVDY 613
Score = 42.8 bits (87), Expect(5) = 5e-045
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQK 222
P F+ E++ VKGS D++GIN YT Y + K
Sbjct: 107 PLFSSEESNRVKGSLDFVGINHYTTYYARNNK 202
Score = 37.3 bits (75), Expect(5) = 5e-045
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 20 AAAQRARDFHVGWFADPL 73
AA QRA+DF +GWF DPL
Sbjct: 2 AATQRAQDFQLGWFMDPL 55
Score = 25.4 bits (49), Expect(5) = 5e-045
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1 / +2
Query: 631 LERHPKASAYWFRDML 678
L R+PKAS WF+ L
Sbjct: 623 LTRYPKASVQWFKCFL 670
>gb|CX652380.1|CX652380 COLD1_58_E05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_58_E05_A029 5', mRNA sequence
Length = 588
Score = 120 bits (256), Expect(4) = 3e-041
Identities = 46/82 (56%), Positives = 57/82 (69%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 296 PKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 475
Query: 307 QANSKWLYIVPEGMYGCVNYLK 372
+ANS WLYIVP G+Y V Y+K
Sbjct: 476 RANSNWLYIVPWGLYKAVTYVK 541
Score = 50.6 bits (104), Expect(4) = 3e-041
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NS+EDQ AAQR+RDFH+GWF P+
Sbjct: 173 NSSEDQGAAQRSRDFHIGWFLHPI 244
Score = 31.3 bits (62), Expect(4) = 3e-041
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 370 KHKYGNPTVFITENGM 417
K+ YGNPT+ ++ENGM
Sbjct: 540 KNTYGNPTMILSENGM 587
Score = 23.1 bits (44), Expect(4) = 3e-041
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M +IV RLP+
Sbjct: 251 GKYPDSMVEIVGTRLPK 301
>gb|DR095084.1|DR095084 STRR1_18_E04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_18_E04_A033 5', mRNA sequence
Length = 813
Score = 84.9 bits (179), Expect(5) = 4e-040
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = +1 / +1
Query: 451 LHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
L+DT R+ + +L + +AI +GADV G+FAWSL+DNFEW GYTS+FG +Y+D+
Sbjct: 487 LNDTWRINYCSEHLHYILQAIREGADVRGFFAWSLMDNFEWGFGYTSRFGFIYIDY 654
Score = 47.3 bits (97), Expect(5) = 4e-040
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1 / +1
Query: 316 SKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
S WLY+ G+ + Y+K +Y NP +FITENG++
Sbjct: 340 SFWLYVYAPGLRDLLIYIKQRYNNPPIFITENGVN 444
Score = 40.0 bits (81), Expect(5) = 4e-040
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
+S +DQ AAQRA DF +GWF DP+
Sbjct: 31 SSQDDQNAAQRAVDFMLGWFIDPV 102
Score = 37.7 bits (76), Expect(5) = 4e-040
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +1 / +1
Query: 130 KFTPEQAKLVKGSADYIGINQYTASY 207
KFT ++++ +KGS D++G+N YT+ Y
Sbjct: 157 KFTEQESEQLKGSFDFLGMNYYTSQY 234
Score = 28.6 bits (56), Expect(5) = 4e-040
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDML 678
L+R+PKASA+W++ L
Sbjct: 664 LKRYPKASAHWYKRFL 711
>gb|AF072736.1|AF072736 Pinus contorta beta-glucosidase mRNA, complete cds
Length = 1909
Score = 82.6 bits (174), Expect(6) = 4e-040
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +1 / +3
Query: 436 TRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVD 615
T + L+D R++F+ L+ L AI +G+DV GYF WSLLDNFEW GYT +FG+ +VD
Sbjct: 1440 TLQENLNDVRRIRFHGDCLSYLSAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 1619
Query: 616 F 618
F
Sbjct: 1620 F 1622
Score = 52.4 bits (108), Expect(6) = 4e-040
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +1 / +3
Query: 256 DWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
D +V ER+G IG + L++VP G+ V Y+K Y NPT+ I ENG
Sbjct: 1254 DSRVYLTGERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIIAENG 1412
Score = 35.9 bits (72), Expect(6) = 4e-040
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1 / +3
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSY 249
P + E + ++GS DY+GIN YT Y L T Y
Sbjct: 1122 PSISSELSAKLRGSFDYMGINHYTTLYATSTPPLSPDHTQY 1244
Score = 30.9 bits (61), Expect(6) = 4e-040
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NS E+++A R F++ WF DP+
Sbjct: 999 NSPEERSAVDRILSFNLRWFLDPI 1070
Score = 29.0 bits (57), Expect(6) = 4e-040
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1 / +3
Query: 634 ERHPKASAYWFRDMLQ 681
+R+PK SA WFR LQ
Sbjct: 1635 KRYPKLSAQWFRQFLQ 1682
Score = 24.4 bits (47), Expect(6) = 4e-040
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3 / +3
Query: 81 GHYPQIMQDIVKERLPQVYSGAS 149
G YPQ M++ + RLP + S S
Sbjct: 1077 GDYPQEMRERLGSRLPSISSELS 1145
>gb|DR690593.1|DR690593 EST1080679 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACW86 3' end, mRNA sequence
Length = 754
Score = 71.2 bits (149), Expect(5) = 7e-040
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +1 / +3
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFE 570
Q L+DT RV ++KGYL L +AI +GADV GYFAWSL+DNFE
Sbjct: 627 QALNDTKRVNYFKGYLKALAEAIWEGADVRGYFAWSLIDNFE 752
Score = 63.8 bits (133), Expect(5) = 7e-040
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = +1 / +3
Query: 235 KPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
K + D + + E G IG +A S+WLYIVP G + +L +Y P +++TENG
Sbjct: 411 KKDEFYVDQDIHSIAEWEGNTIGERAASEWLYIVPWGFRKVLKWLTERYNRPPIYVTENG 590
Query: 415 MD 420
MD
Sbjct: 591 MD 596
Score = 42.8 bits (87), Expect(5) = 7e-040
Identities = 12/28 (42%), Positives = 23/28 (82%)
Frame = +1 / +3
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYV 210
P+F+P++ +++GS+D++G+N YT YV
Sbjct: 306 PQFSPDEVAVLRGSSDFLGLNHYTTRYV 389
Score = 35.9 bits (72), Expect(5) = 7e-040
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 14 DQAAAQRARDFHVGWFADPL 73
D+ AAQR R+F GWF DP+
Sbjct: 195 DKEAAQRRREFQFGWFLDPI 254
Score = 24.0 bits (46), Expect(5) = 7e-040
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP IM+ + +RLPQ
Sbjct: 261 GDYPAIMRKKLGDRLPQ 311
>gb|CO369254.1|CO369254 RTK1_46_A07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_46_A07_A029 3', mRNA sequence
Length = 811
Score = 77.1 bits (162), Expect(6) = 1e-038
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = +1 / +2
Query: 427 GNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIV 606
G + + ++D RV+++ +L+ LR+AI G+DV GY WSL+D+FEW G+T +FG+
Sbjct: 485 GTTSLARAVNDPGRVKYHYQHLSHLREAIRAGSDVRGYLVWSLMDDFEWSFGFTYRFGLY 664
Query: 607 YVDFS 621
YVD +
Sbjct: 665 YVDLN 679
Score = 48.3 bits (99), Expect(6) = 1e-038
Identities = 22/58 (37%), Positives = 28/58 (48%)
Frame = +1 / +2
Query: 241 TSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
T Y D + E NG IG P G+ +NY K++Y NPTV+ITE G
Sbjct: 293 TDYILDARANVTYEVNGVFIGSTEGDNDFRSYPAGLSELLNYTKNRYNNPTVYITETG 466
Score = 37.7 bits (76), Expect(6) = 1e-038
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 5 STEDQAAAQRARDFHVGWFADPL 73
S D+ A QRA DF +GWF DPL
Sbjct: 53 SLSDKRATQRAIDFRLGWFLDPL 121
Score = 37.3 bits (75), Expect(6) = 1e-038
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1 / +2
Query: 118 RGCPKFTPEQAKLVKGSADYIGINQYTASY 207
R P+F+ E+AK +KGS D+IG N Y +
Sbjct: 164 RRLPRFSNEEAKDLKGSFDFIGFNYYITQF 253
Score = 26.3 bits (51), Expect(6) = 1e-038
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 631 LERHPKASAYWFRDMLQ 681
L+R+ +ASA WF+ +LQ
Sbjct: 686 LKRYARASALWFKRILQ 736
Score = 23.5 bits (45), Expect(6) = 1e-038
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3 / +2
Query: 78 NGHYPQIMQDIVKERLPQ 131
+G YP+ M+ +V RLP+
Sbjct: 125 SGKYPESMRRLVGRRLPR 178
>gb|CO369338.1|CO369338 RTK1_46_A07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_46_A07_A029 5', mRNA sequence
Length = 805
Score = 77.1 bits (162), Expect(6) = 1e-038
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = +1 / +1
Query: 427 GNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIV 606
G + + ++D RV+++ +L+ LR+AI G+DV GY WSL+D+FEW G+T +FG+
Sbjct: 475 GTTSLARAVNDPGRVKYHYQHLSHLREAIRAGSDVRGYLVWSLMDDFEWSFGFTYRFGLY 654
Query: 607 YVDFS 621
YVD +
Sbjct: 655 YVDLN 669
Score = 48.3 bits (99), Expect(6) = 1e-038
Identities = 22/58 (37%), Positives = 28/58 (48%)
Frame = +1 / +1
Query: 241 TSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
T Y D + E NG IG P G+ +NY K++Y NPTV+ITE G
Sbjct: 283 TDYILDARANVTYEVNGVFIGSTEGDNDFRSYPAGLSELLNYTKNRYNNPTVYITETG 456
Score = 37.7 bits (76), Expect(6) = 1e-038
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 5 STEDQAAAQRARDFHVGWFADPL 73
S D+ A QRA DF +GWF DPL
Sbjct: 43 SLSDKRATQRAIDFRLGWFLDPL 111
Score = 37.3 bits (75), Expect(6) = 1e-038
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1 / +1
Query: 118 RGCPKFTPEQAKLVKGSADYIGINQYTASY 207
R P+F+ E+AK +KGS D+IG N Y +
Sbjct: 154 RRLPRFSNEEAKDLKGSFDFIGFNYYITQF 243
Score = 26.3 bits (51), Expect(6) = 1e-038
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDMLQ 681
L+R+ +ASA WF+ +LQ
Sbjct: 676 LKRYARASALWFKRILQ 726
Score = 23.5 bits (45), Expect(6) = 1e-038
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 78 NGHYPQIMQDIVKERLPQ 131
+G YP+ M+ +V RLP+
Sbjct: 115 SGKYPESMRRLVGRRLPR 168
>gb|CO164776.1|CO164776 FLD1_50_F04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_F04_A029 3', mRNA sequence
Length = 751
Score = 81.7 bits (172), Expect(4) = 9e-038
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +1 / +1
Query: 283 RNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNL 435
+NG+ IG +A+S WLYIVP G+ +NY+K +Y NP V ITENGMD P N+
Sbjct: 151 KNGRAIGDKASSAWLYIVPHGIRSLMNYIKRRYNNPPVIITENGMDDPNNI 303
Score = 68.4 bits (143), Expect(4) = 9e-038
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +1 / +1
Query: 514 DDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+DG +V GYF WSLLDN+EW +GYTS+FG+ +VD+
Sbjct: 391 EDGCNVGGYFVWSLLDNWEWAAGYTSRFGLYFVDY 495
Score = 37.7 bits (76), Expect(4) = 9e-038
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1 / +1
Query: 142 EQAKLVKGSADYIGINQYTASYVKGQK 222
E++ VKGS D++GIN YT Y + K
Sbjct: 4 EESNRVKGSLDFVGINHYTTYYARNNK 84
Score = 25.4 bits (49), Expect(4) = 9e-038
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDML 678
L R+PKAS WF+ L
Sbjct: 505 LTRYPKASVQWFKCFL 552
>gb|CX712929.1|CX712929 RTPQ1_5_F12.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_5_F12_A032 5', mRNA sequence
Length = 836
Score = 82.6 bits (174), Expect(5) = 1e-036
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +1 / +3
Query: 436 TRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVD 615
T + L+D R++F+ L+ L AI +G+DV GYF WSLLDNFEW GYT +FG+ +VD
Sbjct: 399 TLQENLNDVRRIRFHGDCLSYLTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 578
Query: 616 F 618
F
Sbjct: 579 F 581
Score = 54.7 bits (113), Expect(5) = 1e-036
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +1 / +3
Query: 256 DWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
D +V ER+G IG + L++VP G+ V Y+K Y NPT+ ITENG
Sbjct: 213 DSRVYLTGERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 371
Score = 35.9 bits (72), Expect(5) = 1e-036
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1 / +3
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSY 249
P + E + ++GS DY+GIN YT Y L T Y
Sbjct: 81 PSISSELSAKLRGSFDYMGINHYTTLYATSTPPLSPDHTQY 203
Score = 29.0 bits (57), Expect(5) = 1e-036
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1 / +3
Query: 634 ERHPKASAYWFRDMLQ 681
+R+PK SA WFR LQ
Sbjct: 594 KRYPKLSAQWFRQFLQ 641
Score = 24.4 bits (47), Expect(5) = 1e-036
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3 / +3
Query: 81 GHYPQIMQDIVKERLPQVYSGAS 149
G YPQ M++ + RLP + S S
Sbjct: 36 GDYPQEMRERLGSRLPSISSELS 104
>gb|DR110861.1|DR110861 RTS1_13_B02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_13_B02_A029 5', mRNA sequence
Length = 490
Score = 136 bits (292), Expect(2) = 1e-036
Identities = 52/80 (65%), Positives = 65/80 (81%)
Frame = +1 / +1
Query: 391 TVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFE 570
T+ ++ENGMD PGN+T L+DT RV +YK YL L A++DGA+V GYFAWSLLDNFE
Sbjct: 13 TMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFE 192
Query: 571 WQSGYTSKFGIVYVDFSTPK 630
W+SGYTS+FG+VYVDF+T K
Sbjct: 193 WKSGYTSRFGVVYVDFTTLK 252
Score = 36.8 bits (74), Expect(2) = 1e-036
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF +LQ+H
Sbjct: 247 LKRYPKMSAYWFSKLLQRH 303
>dbj|BD224353.1| Materials and methods for the modification of plant lignin content
Length = 451
Score = 92.7 bits (196), Expect(3) = 2e-035
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +1 / +3
Query: 256 DWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
DW + RNG PIGP+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD
Sbjct: 183 DWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMD 347
Score = 59.3 bits (123), Expect(3) = 2e-035
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSY 249
PKFT EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y
Sbjct: 53 PKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDY 175
Score = 35.9 bits (72), Expect(3) = 2e-035
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1 / +2
Query: 421 QPGNLTRGQYLHDTTRVQFYKGYLAELRKA 510
+PGN+T LHDT R +YK YL L A
Sbjct: 347 RPGNVTLPAGLHDTIRGNYYKSYLQNLINA 436
>dbj|BD224416.1| Materials and methods for the modification of plant lignin content
Length = 437
Score = 92.7 bits (196), Expect(3) = 2e-035
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +1 / +1
Query: 256 DWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
DW + RNG PIGP+ANS WLYIVP G+Y V Y+K YGNPT+ ++ENGMD
Sbjct: 169 DWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMD 333
Score = 59.3 bits (123), Expect(3) = 2e-035
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +1 / +3
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSY 249
PKFT EQ+++VKGS DY+G+NQYTA Y+ K +Q T Y
Sbjct: 39 PKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQPKQNVTDY 161
Score = 35.9 bits (72), Expect(3) = 2e-035
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1 / +3
Query: 421 QPGNLTRGQYLHDTTRVQFYKGYLAELRKA 510
+PGN+T LHDT R +YK YL L A
Sbjct: 333 RPGNVTLPAGLHDTIRGNYYKSYLQNLINA 422
>gb|DR020312.1|DR020312 STRS1_36_C01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_36_C01_A034 3', mRNA sequence
Length = 903
Score = 80.3 bits (169), Expect(6) = 2e-035
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = +1 / +1
Query: 451 LHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
L+D+ RV+++ +L+ L +AI +GADV GY AWSLLD+ EW SGY +FG+ YVD+
Sbjct: 472 LNDSKRVKYHYEHLSSLLQAIREGADVRGYVAWSLLDSLEWSSGYNYRFGLHYVDY 639
Score = 46.0 bits (94), Expect(6) = 2e-035
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +1 / +1
Query: 241 TSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
T Y D + E NG IG P G+ ++Y KH+Y NP ++ITE+G
Sbjct: 256 TDYILDARAIVTYEVNGVYIGSAEGLSEFRSYPAGLRDVISYTKHRYDNPPIYITESG 429
Score = 35.9 bits (72), Expect(6) = 2e-035
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1 / +1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASY 207
P+FT E+A+ +KGS D++G N Y+ +
Sbjct: 139 PQFTIEEAEELKGSFDFLGFNYYSTDF 219
Score = 27.6 bits (54), Expect(6) = 2e-035
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2 / +3
Query: 17 QAAAQRARDFHVGWF 61
Q A QRA DF +GW+
Sbjct: 3 QQATQRAIDFRIGWY 47
Score = 24.9 bits (48), Expect(6) = 2e-035
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDMLQ 681
L+R+ +ASA WF+ +L+
Sbjct: 649 LKRYARASAQWFKTILR 699
Score = 24.4 bits (47), Expect(6) = 2e-035
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 78 NGHYPQIMQDIVKERLPQ 131
+G YP M+ +V RLPQ
Sbjct: 91 SGKYPDSMRXLVGTRLPQ 144
>gb|DR048711.1|DR048711 RTBOR1_10_E10.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_10_E10_A029 5', mRNA sequence
Length = 667
Score = 100 bits (214), Expect(3) = 3e-035
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = +1 / +3
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
Q L+DT RV ++KGYL L +AI +GADV GYFAWSL+DNFEW GYT +FG+V+VD+
Sbjct: 168 QALNDTKRVNYFKGYLKALAEAIREGADVRGYFAWSLIDNFEWGQGYTKRFGLVFVDY 341
Score = 57.9 bits (120), Expect(3) = 3e-035
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +1 / +3
Query: 289 GKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
G IG +A S+WLYIVP G + +L +Y P +++TENGMD
Sbjct: 6 GNTIGERAASEWLYIVPWGFRKVLKWLTERYNRPPIYVTENGMD 137
Score = 28.1 bits (55), Expect(3) = 3e-035
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 631 LERHPKASAYWFRDML 678
L+R+PK+SA+WF L
Sbjct: 351 LKRYPKSSAHWFTSFL 398
>gb|BX681734.1|BX681734 BX681734 RS Pinus pinaster cDNA clone RS63F06, mRNA sequence
Length = 620
Score = 108 bits (230), Expect(3) = 1e-033
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
P FT EQ+++VKGS D++G+NQYTA Y+ K +Q T Y DW + RNG PIGP
Sbjct: 368 PMFTKEQSQMVKGSIDFLGVNQYTAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGP 547
Query: 307 QANSKWLYIVPEGMY 351
+ANS WLYIVP G+Y
Sbjct: 548 RANSNWLYIVPWGIY 592
Score = 50.6 bits (104), Expect(3) = 1e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NS+EDQ AAQR+RDFH+GWF P+
Sbjct: 245 NSSEDQGAAQRSRDFHIGWFLHPI 316
Score = 22.6 bits (43), Expect(3) = 1e-033
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3 / +2
Query: 81 GHYPQIMQDIVKERLP 128
G YP M +IV RLP
Sbjct: 323 GKYPDSMVEIVGTRLP 370
>gb|CO199421.1|CO199421 GEO2_1_C06.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_1_C06_A032 3', mRNA sequence
Length = 870
Score = 79.4 bits (167), Expect(4) = 2e-032
Identities = 27/56 (48%), Positives = 44/56 (78%)
Frame = +1 / +3
Query: 451 LHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
L+D+ R++++ +L+ L ++I +GADV GY AWSL+D+FEW SGY +FG+ +VD+
Sbjct: 363 LNDSGRLKYHSEHLSHLLQSIKEGADVRGYIAWSLMDSFEWSSGYNYRFGLYHVDY 530
Score = 45.1 bits (92), Expect(4) = 2e-032
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1 / +3
Query: 241 TSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
T + D + + NG IG P G+ +NY KH+Y NP ++ITE G
Sbjct: 147 TDFVLDARCNVSYQVNGVYIGSDEGVSDFRSYPAGLRDVINYTKHRYNNPPIYITETG 320
Score = 40.9 bits (83), Expect(4) = 2e-032
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1 / +3
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASY 207
K P+FT ++AK +KGS D++G N YT Y
Sbjct: 18 KSRLPRFTAKEAKELKGSFDFLGYNYYTTQY 110
Score = 29.5 bits (58), Expect(4) = 2e-032
Identities = 8/18 (44%), Positives = 17/18 (94%)
Frame = +1 / +3
Query: 631 LERHPKASAYWFRDMLQK 684
L+R+P++SA+WF+ +L++
Sbjct: 540 LKRYPRSSAHWFKHILRR 593
>gb|DR014803.1|DR014803 HEAT1_51_E12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_E12_A029 5', mRNA sequence
Length = 858
Score = 82.6 bits (174), Expect(4) = 5e-032
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +1 / -3
Query: 436 TRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVD 615
T + L+D R++F+ L+ L AI +G+DV GYF WSLLDNFEW GYT +FG+ +VD
Sbjct: 583 TLQENLNDVRRIRFHGDCLSYLTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 404
Query: 616 F 618
F
Sbjct: 403 F 401
Score = 54.7 bits (113), Expect(4) = 5e-032
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +1 / -3
Query: 256 DWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
D +V ER+G IG + L++VP G+ V Y+K Y NPT+ ITENG
Sbjct: 769 DSRVYLTGERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 611
Score = 29.0 bits (57), Expect(4) = 5e-032
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1 / -3
Query: 634 ERHPKASAYWFRDMLQ 681
+R+PK SA WFR LQ
Sbjct: 388 KRYPKLSAQWFRQFLQ 341
Score = 27.2 bits (53), Expect(4) = 5e-032
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1 / -3
Query: 172 DYIGINQYTASYVKGQKLLQQKPTSY 249
DY+GIN YT Y L T Y
Sbjct: 856 DYMGINHYTTLYATSTPPLSPDHTQY 779
>gb|BX250956.1|BX250956 BX250956 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP043D06, mRNA sequence
Length = 675
Score = 81.7 bits (172), Expect(4) = 1e-031
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +1 / +2
Query: 436 TRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVD 615
T + L D R++F+ L+ L AI +G+DV GYF WSLLDNFEW GYT +FG+ +VD
Sbjct: 284 TLQENLSDVRRIRFHGDCLSYLTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 463
Query: 616 F 618
F
Sbjct: 464 F 466
Score = 51.0 bits (105), Expect(4) = 1e-031
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +1 / +2
Query: 256 DWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
D +V ER+G IG + L++VP G+ V Y+K Y NP + ITENG
Sbjct: 98 DSRVYLTGERHGVSIGERTAMDGLFVVPHGIQKIVEYVKEFYDNPIIIITENG 256
Score = 30.9 bits (61), Expect(4) = 1e-031
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1 / +2
Query: 163 GSADYIGINQYTASYVKGQKLLQQKPTSY 249
GS DY+GIN YT Y L T Y
Sbjct: 2 GSFDYMGINHYTTLYATSTPPLSPDNTQY 88
Score = 29.0 bits (57), Expect(4) = 1e-031
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1 / +2
Query: 634 ERHPKASAYWFRDMLQ 681
+R+PK SA WFR LQ
Sbjct: 479 KRYPKLSAQWFRQFLQ 526
>gb|BG039942.1|BG039942 NXSI_101_H03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_101_H03 5' similar to Arabidopsis thaliana
sequence At5g54570 beta-glucosidase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 540
Score = 66.6 bits (139), Expect(4) = 1e-031
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1 / +2
Query: 517 DGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
DG DV GYF WSLLDN+EW SG+T +FG+ +VD+
Sbjct: 395 DGCDVRGYFVWSLLDNWEWNSGFTVRFGLYFVDY 496
Score = 63.4 bits (132), Expect(4) = 1e-031
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +1 / +2
Query: 283 RNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
R G IG + S+WLY+VP G+ + Y+K +Y NP +FITENG+D
Sbjct: 152 RKGVMIGERGASRWLYVVPWGIRSLMIYIKQRYDNPPIFITENGID 289
Score = 40.5 bits (82), Expect(4) = 1e-031
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +1 / +2
Query: 142 EQAKLVKGSADYIGINQYTASYVKGQKLLQQK 237
+Q+KL++GS D++GIN YT Y + +L +K
Sbjct: 5 DQSKLLRGSFDFVGINHYTTIYTRNDRLQIRK 100
Score = 22.1 bits (42), Expect(4) = 1e-031
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 631 LERHPKASAYW 663
L R+PKASA W
Sbjct: 506 LTRYPKASADW 538
>gb|CO361958.1|CO361958 NDL2_8_E08.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_E08_A029 3', mRNA sequence
Length = 786
Score = 89.0 bits (188), Expect(3) = 1e-029
Identities = 32/58 (55%), Positives = 44/58 (75%)
Frame = +1 / +2
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
Q L+D+ RV ++ +L+EL +AI +GAD+ GY WSLLDNFEW GYT +FG+ YVD+
Sbjct: 275 QALNDSRRVMYHSEHLSELLEAISEGADIRGYLVWSLLDNFEWSFGYTYRFGLYYVDY 448
Score = 46.4 bits (95), Expect(3) = 1e-029
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1 / +2
Query: 241 TSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
T D Q E +G IG P G+ +NY KH+Y NPT+++TE G
Sbjct: 65 TDIVLDAQANISYEVDGVYIGSVEGVSTYRSYPAGLKDIINYTKHRYNNPTIYVTETG 238
Score = 32.7 bits (65), Expect(3) = 1e-029
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +1 / +2
Query: 631 LERHPKASAYWFRDMLQKHL*ASNNQ 708
L+R+P+ASA WFR++L++ +S +Q
Sbjct: 458 LKRYPRASANWFRNILKQENLSSESQ 535
>gb|DR080921.1|DR080921 RTFEPL1_26_D08.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_26_D08_A029 3', mRNA sequence
Length = 707
Score = 83.1 bits (175), Expect(3) = 3e-029
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +1 / +2
Query: 436 TRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVD 615
T + L+D R++F+ L+ L AI +G+DV GYF WSLLDNFEW GYT +FG+ +VD
Sbjct: 242 TLQENLNDVRRIRFHGDCLSYLNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 421
Query: 616 F 618
F
Sbjct: 422 F 424
Score = 54.7 bits (113), Expect(3) = 3e-029
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +1 / +2
Query: 256 DWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
D +V ER+G IG + L++VP G+ V Y+K Y NPT+ ITENG
Sbjct: 56 DSRVYLTGERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 214
Score = 29.0 bits (57), Expect(3) = 3e-029
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1 / +2
Query: 634 ERHPKASAYWFRDMLQ 681
+R+PK SA WFR LQ
Sbjct: 437 KRYPKLSAQWFRQFLQ 484
>gb|CO162371.1|CO162371 FLD1_34_H05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_34_H05_A029 5', mRNA sequence
Length = 738
Score = 83.1 bits (175), Expect(3) = 5e-029
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +1 / -3
Query: 436 TRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVD 615
T + L+D R++F+ L+ L AI +G+DV GYF WSLLDNFEW GYT +FG+ +VD
Sbjct: 571 TLQENLNDVRRIRFHGDCLSYLNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 392
Query: 616 F 618
F
Sbjct: 391 F 389
Score = 53.8 bits (111), Expect(3) = 5e-029
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +1 / -3
Query: 280 ERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
ER+G IG + L++VP G+ V Y+K Y NPT+ ITENG
Sbjct: 733 ERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 599
Score = 29.0 bits (57), Expect(3) = 5e-029
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1 / -3
Query: 634 ERHPKASAYWFRDMLQ 681
+R+PK SA WFR LQ
Sbjct: 376 KRYPKLSAQWFRQFLQ 329
>gb|CO162557.1|CO162557 FLD1_36_C02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_36_C02_A029 3', mRNA sequence
Length = 649
Score = 74.8 bits (157), Expect(3) = 6e-029
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = +1 / +2
Query: 283 RNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNL 435
++GK IG +A+S WLYIVP+G+ +NY+K +Y NP V ITENGMD ++
Sbjct: 8 KDGKAIGDKASSIWLYIVPQGIRSLMNYIKQRYNNPPVIITENGMDDSNDI 160
Score = 68.4 bits (143), Expect(3) = 6e-029
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +1 / +2
Query: 514 DDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+DG +V GYF WSLLDN+EW +GYTS+FG+ +VD+
Sbjct: 248 EDGCNVGGYFVWSLLDNWEWAAGYTSRFGLYFVDY 352
Score = 22.6 bits (43), Expect(3) = 6e-029
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1 / +2
Query: 631 LERHPKASAYWFRDML 678
L R+PK S WF+ L
Sbjct: 362 LTRYPKDSVQWFKCFL 409
>gb|CF390062.1|CF390062 RTDR2_12_E07.b1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_12_E07_A021 3', mRNA
sequence
Length = 587
Score = 73.0 bits (153), Expect(4) = 2e-028
Identities = 26/56 (46%), Positives = 39/56 (69%)
Frame = +1 / +2
Query: 451 LHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
L+DT R+ F +L + +AI +G+D+ G++AWSL+DNFEW GY FG Y+D+
Sbjct: 281 LNDTGRISFCSEHLWYILEAIREGSDIRGFYAWSLMDNFEWSLGYEC*FGFHYIDY 448
Score = 50.1 bits (103), Expect(4) = 2e-028
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +1 / +2
Query: 316 SKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQP 426
S +LY+ G+ + Y+KH+Y NP +FITENG++ P
Sbjct: 134 SDYLYVYAPGIKDLLIYIKHQYNNPPIFITENGVNDP 244
Score = 29.9 bits (59), Expect(4) = 2e-028
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = +1 / +2
Query: 631 LERHPKASAYWFRDML 678
L+R+PKASA+W++ +L
Sbjct: 458 LKRYPKASAHWYKKLL 505
Score = 28.1 bits (55), Expect(4) = 2e-028
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1 / +2
Query: 181 GINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQAN 315
G+N YT+ Y + + ++ D + V ERNG IG +A+
Sbjct: 2 GVNYYTSQYAINCPEPTSQMSCWNLDCGARCVCERNGVWIGRKAS 136
>gb|AW042637.1|AW042637 ST24C01 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST24C01, mRNA sequence
Length = 567
Score = 79.9 bits (168), Expect(3) = 7e-028
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +1 / +3
Query: 436 TRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVD 615
T + L+D R++F+ L+ L AI +G+DV GYF WSLLDNFEW GYT +FG+ +V
Sbjct: 273 TLQENLNDVRRIRFHGDCLSYLNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVG 452
Query: 616 F 618
F
Sbjct: 453 F 455
Score = 54.7 bits (113), Expect(3) = 7e-028
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +1 / +3
Query: 256 DWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
D +V ER+G IG + L++VP G+ V Y+K Y NPT+ ITENG
Sbjct: 87 DSRVYLTGERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 245
Score = 27.6 bits (54), Expect(3) = 7e-028
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / +1
Query: 634 ERHPKASAYWFRDMLQ 681
+R+PK SA WF+ LQ
Sbjct: 469 KRYPKLSAQWFKQFLQ 516
>gb|CX652916.1|CX652916 COLD1_62_F11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_F11_A029 3', mRNA sequence
Length = 805
Score = 84.9 bits (179), Expect(3) = 2e-027
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = +1 / +3
Query: 451 LHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
L+DT R+ + +L + +AI +GADV G+FAWSL+DNFEW GYTS+FG +Y+D+
Sbjct: 222 LNDTWRINYCSEHLHYILQAIREGADVRGFFAWSLMDNFEWGFGYTSRFGFIYIDY 389
Score = 47.3 bits (97), Expect(3) = 2e-027
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1 / +3
Query: 316 SKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
S WLY+ G+ + Y+K +Y NP +FITENG++
Sbjct: 75 SFWLYVYAPGLRDLLIYIKQRYNNPPIFITENGVN 179
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 631 LERHPKASAYWFRDML 678
L+R+PKASA+W++ L
Sbjct: 399 LKRYPKASAHWYKRFL 446
>gb|BX254352.1|BX254352 BX254352 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP097C12, mRNA sequence
Length = 664
Score = 67.0 bits (140), Expect(3) = 2e-027
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +1 / +2
Query: 514 DDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+DG DV GYF WSLLDN+EW SG+T +FG+ +VD+
Sbjct: 338 NDGCDVRGYFVWSLLDNWEWNSGFTVRFGLYFVDY 442
Score = 64.3 bits (134), Expect(3) = 2e-027
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +1 / +2
Query: 283 RNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGN 432
R G IG + S+WLY+VP G+ + Y+K +Y NP + ITENG+D P +
Sbjct: 98 RKGVMIGERGASRWLYVVPWGIRSSMIYIKQRYDNPPIIITENGIDDPNS 247
Score = 29.5 bits (58), Expect(3) = 2e-027
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 631 LERHPKASAYWFRDMLQK 684
L R+PKASA WF+ L K
Sbjct: 452 LTRYPKASADWFKSFLPK 505
>gb|CX646974.1|CX646974 COLD1_12_D12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_12_D12_A029 5', mRNA sequence
Length = 794
Score = 71.2 bits (149), Expect(3) = 4e-027
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +1 / +1
Query: 514 DDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
DDG V GYFAWSLLDN+EW +GYTS+FG+ +VD+
Sbjct: 226 DDGCKVGGYFAWSLLDNWEWAAGYTSRFGLYFVDY 330
Score = 60.6 bits (126), Expect(3) = 4e-027
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = +1 / +1
Query: 298 IGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNL 435
IG +A S WLY G+ +NY+K +Y NP V ITENGMD N+
Sbjct: 1 IGDKAASAWLYPFSHGIRSLMNYIKQRYNNPPVIITENGMDDSNNI 138
Score = 27.6 bits (54), Expect(3) = 4e-027
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDML 678
L RHPKAS WF+ L
Sbjct: 340 LTRHPKASVKWFKCFL 387
>gb|CF668848.1|CF668848 RTCNT1_39_C01.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_39_C01_A029 3', mRNA sequence
Length = 737
Score = 83.1 bits (175), Expect(3) = 4e-027
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +1 / +1
Query: 436 TRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVD 615
T + L+D R++F+ L+ L AI +G+DV GYF WSLLDNFEW GYT +FG+ +VD
Sbjct: 145 TLQENLNDVRRIRFHGDCLSYLNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 324
Query: 616 F 618
F
Sbjct: 325 F 327
Score = 47.3 bits (97), Expect(3) = 4e-027
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1 / +1
Query: 298 IGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
IG + L++VP G+ V Y+K Y NPT+ ITENG
Sbjct: 1 IGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 117
Score = 29.0 bits (57), Expect(3) = 4e-027
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1 / +1
Query: 634 ERHPKASAYWFRDMLQ 681
+R+PK SA WFR LQ
Sbjct: 340 KRYPKLSAQWFRQFLQ 387
>gb|DR013536.1|DR013536 HEAT1_19_H11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_19_H11_A029 5', mRNA sequence
Length = 729
Score = 76.7 bits (161), Expect(3) = 1e-025
Identities = 26/56 (46%), Positives = 42/56 (75%)
Frame = +1 / -2
Query: 451 LHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
L+D+ R++++ +L+ L + I +GADV GY WSL+D+FEW SGY +FG+ +VD+
Sbjct: 458 LNDSGRLKYHSEHLSHLLQGIKEGADVRGYIIWSLMDSFEWSSGYNYRFGLYHVDY 291
Score = 48.3 bits (99), Expect(3) = 1e-025
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +1 / -2
Query: 241 TSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
T + D + + NG IG P G+ G +NY KH+Y NP ++ITE G
Sbjct: 674 TDFVLDARCNVSYQVNGVYIGSDEGVSDFRSYPAGLRGVINYTKHRYNNPPIYITETG 501
Score = 29.5 bits (58), Expect(3) = 1e-025
Identities = 8/18 (44%), Positives = 17/18 (94%)
Frame = +1 / -2
Query: 631 LERHPKASAYWFRDMLQK 684
L+R+P++SA+WF+ +L++
Sbjct: 281 LKRYPRSSAHWFKHILRR 228
>gb|CF390726.1|CF390726 RTDR2_17_D05.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_17_D05_A021 5', mRNA
sequence
Length = 796
Score = 87.2 bits (184), Expect(2) = 3e-025
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = +1 / +2
Query: 451 LHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFS 621
LHD+ RV+++ +L+ L +AI +GADV GY WSLLDNFEW SGY +FG+ Y+D++
Sbjct: 326 LHDSRRVEYHSQHLSYLLEAIREGADVRGYVVWSLLDNFEWASGYDYRFGLYYIDYN 496
Score = 48.3 bits (99), Expect(2) = 3e-025
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1 / +2
Query: 241 TSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
T Y D + E NG +G P G+ +NY KH+Y NP ++ITE G
Sbjct: 110 TDYVLDARANISYEVNGVYLGSDEGVSAFRSYPAGLRDVINYTKHRYNNPPIYITETG 283
>gb|DR744663.1|DR744663 RTCU1_24_B09.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_24_B09_A029 3', mRNA sequence
Length = 727
Score = 77.1 bits (162), Expect(3) = 3e-025
Identities = 26/56 (46%), Positives = 43/56 (76%)
Frame = +1 / +1
Query: 451 LHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
L+D+ R++++ +L+ L ++I +GADV GY WSL+D+FEW SGY +FG+ +VD+
Sbjct: 277 LNDSGRLKYHSEHLSHLLQSIKEGADVRGYIIWSLMDSFEWSSGYNYRFGLYHVDY 444
Score = 46.4 bits (95), Expect(3) = 3e-025
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +1 / +1
Query: 241 TSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENG 414
T + D + + NG IG P G+ +NY+KH+Y NP ++ITE G
Sbjct: 61 TDFVLDARCNVSYQVNGVYIGSDEGVSDFRSYPAGLRDVINYIKHRYNNPPIYITETG 234
Score = 29.5 bits (58), Expect(3) = 3e-025
Identities = 8/18 (44%), Positives = 17/18 (94%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDMLQK 684
L+R+P++SA+WF+ +L++
Sbjct: 454 LKRYPRSSAHWFKHILRR 507
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 461,904,087
Number of Sequences: 355925
Number of extensions: 6651955
Number of successful extensions: 35940
Number of sequences better than 1.0e-020: 79
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 12454975995
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)