TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3042304.2.1
(805 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF479544.1|CF479544 RTWW3_22_G10.g1_A022 Well-watered lo... 302 3e-081
gb|DR092788.1|DR092788 STRR1_4_A12.b1_A033 Stem Response Re... 302 3e-081
gb|DR092855.1|DR092855 STRR1_4_A12.g1_A033 Stem Response Re... 302 3e-081
gb|DR100307.1|DR100307 STRR1_63_E02.b1_A033 Stem Response R... 302 3e-081
gb|DR384279.1|DR384279 RTHG1_1_E12.b1_A029 Roots plus added... 302 3e-081
gb|DR682085.1|DR682085 EST1072160 Normalized pine embryo li... 302 3e-081
gb|DR056998.1|DR056998 RTNIT1_1_H09.g1_A029 Roots minus nit... 298 3e-080
gb|BX254051.1|BX254051 BX254051 Pinus pinaster differenciat... 295 2e-079
gb|BM492654.1|BM492654 NXRV_029_B09_F NXRV (Nsf Xylem Root ... 292 3e-078
gb|CO367783.1|CO367783 RTK1_36_C12.g1_A029 Roots minus pota... 288 4e-077
gb|DR684166.1|DR684166 EST1074243 Normalized pine embryo li... 285 3e-076
gb|BE496383.1|BE496383 NXCI_017_A02_F NXCI (Nsf Xylem Compr... 278 3e-074
gb|DR081469.1|DR081469 RTFEPL1_29_G11.g1_A029 Roots plus ad... 273 9e-073
gb|DR079740.1|DR079740 RTFEPL1_17_F12.b1_A029 Roots plus ad... 252 2e-066
gb|DR691657.1|DR691657 EST1081744 Normalized pine embryo li... 246 1e-064
gb|AW888189.1|AW888189 NXNV_105_F12_F Nsf Xylem Normal wood... 243 2e-063
gb|BQ654839.1|BQ654839 NXRV086_D03_F NXRV (Nsf Xylem Root w... 241 6e-063
gb|BX255353.1|BX255353 BX255353 Pinus pinaster differenciat... 237 7e-062
gb|CO370420.1|CO370420 RTK1_67_F07.g1_A029 Roots minus pota... 232 2e-060
gb|CV033876.1|CV033876 RTNACL1_37_D08.b1_A029 Roots plus ad... 232 2e-060
gb|CV036240.1|CV036240 RTNACL1_57_F03.g1_A029 Roots plus ad... 232 2e-060
gb|CX646821.1|CX646821 COLD1_11_E12.g1_A029 Root cold Pinus... 232 2e-060
gb|DR048632.1|DR048632 RTBOR1_10_E05.b1_A029 Roots plus add... 232 2e-060
gb|DR055465.1|DR055465 RTCA1_23_G10.g2_A029 Roots minus cal... 232 2e-060
gb|BX254029.1|BX254029 BX254029 Pinus pinaster differenciat... 232 3e-060
gb|CX650237.1|CX650237 COLD1_44_H04.b1_A029 Root cold Pinus... 232 3e-060
gb|DR688096.1|DR688096 EST1078180 Normalized pine embryo li... 231 5e-060
gb|BX253086.1|BX253086 BX253086 Pinus pinaster differenciat... 231 6e-060
gb|CO162913.1|CO162913 FLD1_38_G02.b1_A029 Root flooded Pin... 229 2e-059
gb|BG526951.1|BG526951 NXPV_057_G05_F NXPV (Nsf Xylem Plani... 228 3e-059
gb|CO166920.1|CO166920 FLD1_65_A12.g1_A029 Root flooded Pin... 226 2e-058
gb|DR023386.1|DR023386 STRS1_57_F01.b1_A034 Shoot tip pitch... 226 2e-058
gb|DR061070.1|DR061070 RTNIT1_31_H03.g1_A029 Roots minus ni... 222 2e-057
gb|CF389128.1|CF389128 RTDR2_13_D11.g1_A021 Loblolly pine r... 221 4e-057
gb|DR092087.1|DR092087 RTAL1_26_E11.b1_A029 Roots plus adde... 216 2e-055
gb|DR049907.1|DR049907 RTBOR1_19_H03.g1_A029 Roots plus add... 153 5e-055
gb|CO169434.1|CO169434 NDL1_7_B11.b1_A029 Needles control P... 149 4e-054
gb|BE644028.1|BE644028 NXCI_053_G03_F NXCI (Nsf Xylem Compr... 208 5e-053
gb|DR072584.1|DR072584 RTDK1_27_F10.b1_A029 Roots, dark Pin... 204 5e-052
gb|CX646741.1|CX646741 COLD1_11_E12.b1_A029 Root cold Pinus... 204 6e-052
gb|DR071320.1|DR071320 RTDK1_19_C12.b1_A029 Roots, dark Pin... 204 6e-052
gb|AW758792.1|AW758792 NXNV_089_G04_F Nsf Xylem Normal wood... 204 9e-052
gb|DT634473.1|DT634473 EST1149404 Normalized pine embryo li... 199 2e-050
gb|DT631983.1|DT631983 EST1146914 Normalized pine embryo li... 194 7e-049
gb|DR081398.1|DR081398 RTFEPL1_29_G11.b1_A029 Roots plus ad... 192 2e-048
gb|AW758946.1|AW758946 NXNV_095_F06_F Nsf Xylem Normal wood... 190 9e-048
gb|BF186163.1|BF186163 NXCI_133_G06_F NXCI (Nsf Xylem Compr... 189 2e-047
gb|CX648143.1|CX648143 COLD1_26_G01.g1_A029 Root cold Pinus... 188 6e-047
gb|CX650015.1|CX650015 COLD1_43_A08.b1_A029 Root cold Pinus... 188 6e-047
gb|AI813092.1|AI813092 20F12 Pine Lambda Zap Xylem library ... 187 1e-046
gb|DR060989.1|DR060989 RTNIT1_31_H03.b1_A029 Roots minus ni... 186 2e-046
gb|CF479423.1|CF479423 RTWW3_22_G10.b1_A022 Well-watered lo... 184 7e-046
gb|DR682084.1|DR682084 EST1072159 Normalized pine embryo li... 184 7e-046
gb|CO365130.1|CO365130 RTK1_23_G05.g1_A029 Roots minus pota... 182 2e-045
gb|CO166181.1|CO166181 FLD1_59_H09.g1_A029 Root flooded Pin... 182 3e-045
gb|BX252587.1|BX252587 BX252587 Pinus pinaster differenciat... 181 5e-045
gb|CO365042.1|CO365042 RTK1_23_G05.b1_A029 Roots minus pota... 178 3e-044
gb|DR684272.1|DR684272 EST1074349 Normalized pine embryo li... 178 3e-044
gb|DR048707.1|DR048707 RTBOR1_10_E05.g1_A029 Roots plus add... 177 6e-044
gb|CV036174.1|CV036174 RTNACL1_57_F03.b1_A029 Roots plus ad... 174 6e-043
gb|BF777810.1|BF777810 NXSI_075_H12_F NXSI (Nsf Xylem Side ... 172 2e-042
gb|BQ697805.1|BQ697805 NXPV_061_A10_F NXPV (Nsf Xylem Plani... 170 1e-041
gb|CX652950.1|CX652950 COLD1_62_B04.g1_A029 Root cold Pinus... 168 5e-041
gb|AW784129.1|AW784129 NXNV_103_E03_F Nsf Xylem Normal wood... 167 7e-041
gb|BQ696619.1|BQ696619 NXPV_043_C09_F NXPV (Nsf Xylem Plani... 166 2e-040
gb|BE241113.1|BE241113 NXNV_173_A08_F Nsf Xylem Normal wood... 165 3e-040
gb|BG275186.1|BG275186 NXSI_140_H02_F NXSI (Nsf Xylem Side ... 165 3e-040
gb|BE643911.1|BE643911 NXCI_048_H08_F NXCI (Nsf Xylem Compr... 161 6e-039
gb|BX255109.1|BX255109 BX255109 Pinus pinaster differenciat... 159 2e-038
gb|BQ698583.1|BQ698583 NXPV_071_F08_F NXPV (Nsf Xylem Plani... 159 2e-038
gb|BQ696029.1|BQ696029 NXPV_035_F01_F NXPV (Nsf Xylem Plani... 159 3e-038
gb|DR385918.1|DR385918 RTHG1_11_D11.g1_A029 Roots plus adde... 123 1e-037
gb|BF610263.1|BF610263 NXSI_057_B05_F NXSI (Nsf Xylem Side ... 156 1e-037
gb|AW758685.1|AW758685 NXNV_085_C06_F Nsf Xylem Normal wood... 156 2e-037
gb|DR094453.1|DR094453 STRR1_14_E02.g1_A033 Stem Response R... 155 3e-037
gb|DR022670.1|DR022670 STRS1_52_E04.g1_A034 Shoot tip pitch... 155 4e-037
gb|BI202802.1|BI202802 NXPV_090_F11_F NXPV (Nsf Xylem Plani... 155 5e-037
gb|BG275851.1|BG275851 NXSI_148_F04_F NXSI (Nsf Xylem Side ... 153 1e-036
gb|CV032286.1|CV032286 RTNACL1_7_D03.b1_A029 Roots plus add... 153 1e-036
gb|CX646066.1|CX646066 COLD1_7_C08.b1_A029 Root cold Pinus ... 153 1e-036
gb|DR069646.1|DR069646 RTDK1_8_C04.g1_A029 Roots, dark Pinu... 153 1e-036
gb|DR022522.1|DR022522 STRS1_51_E04.g1_A034 Shoot tip pitch... 151 5e-036
gb|BQ700846.1|BQ700846 NXRV112_B12_F NXRV (Nsf Xylem Root w... 151 6e-036
gb|BF518118.1|BF518118 NXSI_035_C02_F NXSI (Nsf Xylem Side ... 149 3e-035
gb|BQ696316.1|BQ696316 NXPV_037_H09_F NXPV (Nsf Xylem Plani... 148 6e-035
gb|DR022603.1|DR022603 STRS1_52_E04.b1_A034 Shoot tip pitch... 144 5e-034
gb|BG317512.1|BG317512 NXPV_002_F10_F NXPV (Nsf Xylem Plani... 142 3e-033
gb|CO367722.1|CO367722 RTK1_36_C12.b1_A029 Roots minus pota... 136 2e-031
gb|BE049813.1|BE049813 NXNV_144_E12_F Nsf Xylem Normal wood... 135 4e-031
gb|BQ696304.1|BQ696304 NXPV_037_G06_F NXPV (Nsf Xylem Plani... 133 2e-030
gb|BG040600.1|BG040600 NXSI_113_A01_F NXSI (Nsf Xylem Side ... 126 2e-028
gb|DR069574.1|DR069574 RTDK1_8_C04.b1_A029 Roots, dark Pinu... 122 4e-027
gb|BQ697176.1|BQ697176 NXPV_050_D09_F NXPV (Nsf Xylem Plani... 121 6e-027
gb|CO158653.1|CO158653 FLD1_8_G04.b1_A029 Root flooded Pinu... 118 4e-026
gb|CO200454.1|CO200454 GEO2_7_C04.g1_A032 Root gravitropism... 116 2e-025
gb|DR022458.1|DR022458 STRS1_51_E04.b1_A034 Shoot tip pitch... 114 7e-025
gb|DR118566.1|DR118566 RTMG1_17_G05.g1_A029 Roots minus mag... 112 2e-024
gb|CO168704.1|CO168704 NDL1_2_A02.b1_A029 Needles control P... 111 9e-024
gb|BF010807.1|BF010807 NXCI_095_A03_F NXCI (Nsf Xylem Compr... 107 8e-023
gb|BM427736.1|BM427736 NXRV_002_E07_F NXRV (Nsf Xylem Root ... 107 8e-023
gb|BE049816.1|BE049816 NXNV_144_F06_F Nsf Xylem Normal wood... 106 2e-022
gb|CD025786.1|CD025786 NXSI_081_C08_F NXSI (Nsf Xylem Side ... 105 5e-022
gb|BM133194.1|BM133194 NXLV_001_D11_F NXLV (Nsf Xylem Late ... 102 4e-021
gb|CO169507.1|CO169507 NDL1_7_B11.g1_A029 Needles control P... 100 9e-021
>gb|CF479544.1|CF479544 RTWW3_22_G10.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_22_G10_A022 5', mRNA sequence
Length = 716
Score = 302 bits (653), Expect = 3e-081
Identities = 122/147 (82%), Positives = 135/147 (91%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+L
Sbjct: 209 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 388
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGEHVGPFNLGNPGEFTMLELA VV++TID NA+IEFR NT DDPHKRKPDI +AK+LL
Sbjct: 389 MEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLL 568
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQ 485
GWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 569 GWEPKVSLRKGLPLMVEDFRRRVFGDE 649
Score = 226 bits (489), Expect = 1e-058
Identities = 105/146 (71%), Positives = 112/146 (76%)
Frame = -1 / -3
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RKS T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+
Sbjct: 645 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 466
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*A 122
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TV GS A*A
Sbjct: 465 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 286
Query: 121 TX*LTTRPSSMHMRGPYVLKIRAIXT 44
T LTTRPSS H+RGPYVLKIRAI T
Sbjct: 285 TKLLTTRPSSRHIRGPYVLKIRAIRT 208
>gb|DR092788.1|DR092788 STRR1_4_A12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_4_A12_A033 3', mRNA sequence
Length = 898
Score = 302 bits (653), Expect = 3e-081
Identities = 122/147 (82%), Positives = 135/147 (91%)
Frame = +3 / -3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+L
Sbjct: 728 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 549
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGEHVGPFNLGNPGEFTMLELA VV++TID NA+IEFR NT DDPHKRKPDI +AK+LL
Sbjct: 548 MEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLL 369
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQ 485
GWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 368 GWEPKVSLRKGLPLMVEDFRRRVFGDE 288
Score = 226 bits (489), Expect = 1e-058
Identities = 105/146 (71%), Positives = 112/146 (76%)
Frame = -1 / +1
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RKS T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+
Sbjct: 292 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 471
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*A 122
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TV GS A*A
Sbjct: 472 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 651
Query: 121 TX*LTTRPSSMHMRGPYVLKIRAIXT 44
T LTTRPSS H+RGPYVLKIRAI T
Sbjct: 652 TKLLTTRPSSRHIRGPYVLKIRAIRT 729
>gb|DR092855.1|DR092855 STRR1_4_A12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_4_A12_A033 5', mRNA sequence
Length = 885
Score = 302 bits (653), Expect = 3e-081
Identities = 122/147 (82%), Positives = 135/147 (91%)
Frame = +3 / -3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+L
Sbjct: 811 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 632
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGEHVGPFNLGNPGEFTMLELA VV++TID NA+IEFR NT DDPHKRKPDI +AK+LL
Sbjct: 631 MEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLL 452
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQ 485
GWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 451 GWEPKVSLRKGLPLMVEDFRRRVFGDE 371
Score = 226 bits (489), Expect = 1e-058
Identities = 105/146 (71%), Positives = 112/146 (76%)
Frame = -1 / +3
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RKS T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+
Sbjct: 375 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 554
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*A 122
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TV GS A*A
Sbjct: 555 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 734
Query: 121 TX*LTTRPSSMHMRGPYVLKIRAIXT 44
T LTTRPSS H+RGPYVLKIRAI T
Sbjct: 735 TKLLTTRPSSRHIRGPYVLKIRAIRT 812
>gb|DR100307.1|DR100307 STRR1_63_E02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_63_E02_A033 3', mRNA sequence
Length = 830
Score = 302 bits (653), Expect = 3e-081
Identities = 122/147 (82%), Positives = 135/147 (91%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+L
Sbjct: 103 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 282
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGEHVGPFNLGNPGEFTMLELA VV++TID NA+IEFR NT DDPHKRKPDI +AK+LL
Sbjct: 283 MEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLL 462
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQ 485
GWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 463 GWEPKVSLRKGLPLMVEDFRRRVFGDE 543
Score = 226 bits (489), Expect = 1e-058
Identities = 105/146 (71%), Positives = 112/146 (76%)
Frame = -1 / -1
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RKS T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+
Sbjct: 539 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 360
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*A 122
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TV GS A*A
Sbjct: 359 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 180
Query: 121 TX*LTTRPSSMHMRGPYVLKIRAIXT 44
T LTTRPSS H+RGPYVLKIRAI T
Sbjct: 179 TKLLTTRPSSRHIRGPYVLKIRAIRT 102
>gb|DR384279.1|DR384279 RTHG1_1_E12.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_1_E12_A029 3', mRNA sequence
Length = 749
Score = 302 bits (653), Expect = 3e-081
Identities = 122/147 (82%), Positives = 135/147 (91%)
Frame = +3 / -3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+L
Sbjct: 714 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 535
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGEHVGPFNLGNPGEFTMLELA VV++TID NA+IEFR NT DDPHKRKPDI +AK+LL
Sbjct: 534 MEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLL 355
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQ 485
GWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 354 GWEPKVSLRKGLPLMVEDFRRRVFGDE 274
Score = 226 bits (489), Expect = 1e-058
Identities = 105/146 (71%), Positives = 112/146 (76%)
Frame = -1 / +2
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RKS T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+
Sbjct: 278 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 457
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*A 122
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TV GS A*A
Sbjct: 458 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 637
Query: 121 TX*LTTRPSSMHMRGPYVLKIRAIXT 44
T LTTRPSS H+RGPYVLKIRAI T
Sbjct: 638 TKLLTTRPSSRHIRGPYVLKIRAIRT 715
>gb|DR682085.1|DR682085 EST1072160 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA651 3' end, mRNA sequence
Length = 797
Score = 302 bits (653), Expect = 3e-081
Identities = 122/147 (82%), Positives = 135/147 (91%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+L
Sbjct: 166 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 345
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGEHVGPFNLGNPGEFTMLELA VV++TID NA+IEFR NT DDPHKRKPDI +AK+LL
Sbjct: 346 MEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLL 525
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQ 485
GWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 526 GWEPKVSLRKGLPLMVEDFRRRVFGDE 606
Score = 229 bits (495), Expect = 2e-059
Identities = 107/156 (68%), Positives = 116/156 (74%)
Frame = -1 / -1
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RKS T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+
Sbjct: 602 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 423
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*A 122
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TV GS A*A
Sbjct: 422 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 243
Query: 121 TX*LTTRPSSMHMRGPYVLKIRAIXTQGWHTVVIHG 14
T LTTRPSS H+RGPYVLKIRAI T + +V G
Sbjct: 242 TKLLTTRPSSRHIRGPYVLKIRAIRTSTFVLIVFTG 135
>gb|DR056998.1|DR056998 RTNIT1_1_H09.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_1_H09_A029 5', mRNA sequence
Length = 786
Score = 298 bits (645), Expect = 3e-080
Identities = 121/147 (82%), Positives = 134/147 (91%)
Frame = +3 / -2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARI NTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+L
Sbjct: 752 VRIARISNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 573
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGEHVGPFNLGNPGEFTMLELA VV++TID NA+IEFR NT DDPHKRKPDI +AK+LL
Sbjct: 572 MEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLL 393
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQ 485
GWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 392 GWEPKVSLRKGLPLMVEDFRRRVFGDE 312
Score = 222 bits (480), Expect = 2e-057
Identities = 103/146 (70%), Positives = 111/146 (76%)
Frame = -1 / +1
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RKS T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+
Sbjct: 316 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 495
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*A 122
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TV GS A*A
Sbjct: 496 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 675
Query: 121 TX*LTTRPSSMHMRGPYVLKIRAIXT 44
T LTTRPSS H+RGPYV +IRAI T
Sbjct: 676 TKLLTTRPSSRHIRGPYVXEIRAIRT 753
>gb|BX254051.1|BX254051 BX254051 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP092F08 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 692
Score = 295 bits (639), Expect = 2e-079
Identities = 120/144 (83%), Positives = 132/144 (91%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+L
Sbjct: 240 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 419
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGEHVGPFNLGNPGEFTMLELA VV++TID NA+IEFR NT DDPHKRKPDI +AK+LL
Sbjct: 420 MEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLL 599
Query: 405 GWEPKIPLREGLPLMVTDFRKRIF 476
GWEPK+ LR+GLPLMV DFR+R+F
Sbjct: 600 GWEPKVSLRKGLPLMVEDFRRRVF 671
Score = 219 bits (472), Expect = 2e-056
Identities = 102/144 (70%), Positives = 109/144 (75%)
Frame = -1 / -2
Query: 475 KMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTT 296
K R RKS T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+TT
Sbjct: 670 KTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSFTT 491
Query: 295 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX 116
ASS++VNSPG PRL GPTCSPSIS IRPSTRSET WKL VCFPSP*TV GS A*AT
Sbjct: 490 CASSNIVNSPGFPRLKGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*ATK 311
Query: 115 *LTTRPSSMHMRGPYVLKIRAIXT 44
LTTRPSS H+RGPYVLKIRAI T
Sbjct: 310 LLTTRPSSRHIRGPYVLKIRAIRT 239
>gb|BM492654.1|BM492654 NXRV_029_B09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_029_B09 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 627
Score = 292 bits (631), Expect = 3e-078
Identities = 118/147 (80%), Positives = 131/147 (89%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+L
Sbjct: 20 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 199
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGEHVGPFNLGNPGEFTMLELA V++TID NA+IEFR NT DDPHKRKP +AK+LL
Sbjct: 200 MEGEHVGPFNLGNPGEFTMLELAQXVKETIDTNAKIEFRPNTEDDPHKRKPXXTKAKDLL 379
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQ 485
GWEPK+ R+GLPLMV DFR+R+FGD+
Sbjct: 380 GWEPKVSXRKGLPLMVEDFRRRVFGDE 460
Score = 221 bits (476), Expect = 7e-057
Identities = 103/146 (70%), Positives = 109/146 (74%)
Frame = -1 / -1
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RKS T+RGRP GS P S A SG LCGSS VF NSI AL S+VS+
Sbjct: 456 SPKTRRRKSSTIRGRPFLXDTLGSQPSRSFALVXSGFLLCGSSSVFGLNSIFALVSIVSF 277
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*A 122
T ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TV GS A*A
Sbjct: 276 TXCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 97
Query: 121 TX*LTTRPSSMHMRGPYVLKIRAIXT 44
T LTTRPSS H+RGPYVLKIRAI T
Sbjct: 96 TKLLTTRPSSRHIRGPYVLKIRAIRT 19
>gb|CO367783.1|CO367783 RTK1_36_C12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_C12_A029 5', mRNA sequence
Length = 792
Score = 288 bits (623), Expect = 4e-077
Identities = 118/144 (81%), Positives = 130/144 (90%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLV+GL++L
Sbjct: 200 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLIRL 379
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
ME HVGPFNLGNPGEFTMLELA VV++TID +ARIEF++NT DDPHKRKPDI +AK+LL
Sbjct: 380 MENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPHKRKPDITKAKDLL 559
Query: 405 GWEPKIPLREGLPLMVTDFRKRIF 476
WEP+I LREGLPLMV DFRKR+F
Sbjct: 560 KWEPRISLREGLPLMVEDFRKRVF 631
Score = 192 bits (414), Expect = 2e-048
Identities = 96/144 (66%), Positives = 106/144 (73%)
Frame = -1 / -1
Query: 475 KMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTT 296
K RLRKS T+ G PS + I GSH R S A +SG L GSS VF NSI AL S+VS+TT
Sbjct: 630 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 451
Query: 295 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX 116
ASS++VNSPGLPRL GPT SIS I PST+SETY KL VC PSP*TV GS SA*AT
Sbjct: 450 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*ATK 271
Query: 115 *LTTRPSSMHMRGPYVLKIRAIXT 44
LTTRPSSMH+ GPYVL IRA+ T
Sbjct: 270 LLTTRPSSMHILGPYVLNIRAMRT 199
Score = 111 bits (236), Expect(2) = 7e-025
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = -3 / -3
Query: 338 ELDPCVGVDGVLDNXGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSIT 159
E +PC + N KL H EL+ +A+++ S M+ FHQ +Q+++QIRNIL+ P L ++T
Sbjct: 493 EFNPCTRIYCFFHNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNILKAPCLFTVT 314
Query: 158 INRQWLXXQCLSNXLTDNTAIVNAHARAICVEDTCDXN 45
IN Q QCLSN + +NTAI++AH+ +ICVE TC+ +
Sbjct: 313 INCQRFFAQCLSNKVANNTAIIDAHSGSICVEYTCNAD 200
Score = 23.1 bits (44), Expect(2) = 7e-025
Identities = 6/27 (22%), Positives = 17/27 (62%)
Frame = -3 / -3
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKEL 396
++ A++ DH+ K+ + + W P +++
Sbjct: 631 KNTFAKIFDHQRKSFPQRNSWFPLQKI 551
>gb|DR684166.1|DR684166 EST1074243 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAP61 3' end, mRNA sequence
Length = 736
Score = 285 bits (616), Expect = 3e-076
Identities = 117/144 (81%), Positives = 129/144 (89%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDD RVVS VAQAL EPLTVYGDGKQTRSFQYVSDLV+GL++L
Sbjct: 281 VRIARIFNTYGPRMCIDDDRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLIRL 460
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
ME HVGPFNLGNPGEFTMLELA VV++TID +ARIEF++NT DDPHKRKPDI +AK+LL
Sbjct: 461 MENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPHKRKPDITKAKDLL 640
Query: 405 GWEPKIPLREGLPLMVTDFRKRIF 476
WEP+I LREGLPLMV DFRKR+F
Sbjct: 641 KWEPRISLREGLPLMVEDFRKRVF 712
Score = 188 bits (406), Expect = 3e-047
Identities = 95/144 (65%), Positives = 105/144 (72%)
Frame = -1 / -2
Query: 475 KMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTT 296
K RLRKS T+ G PS + I GSH R S A +SG L GSS VF NSI AL S+VS+TT
Sbjct: 711 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 532
Query: 295 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX 116
ASS++VNSPGLPRL GPT SIS I PST+SETY KL VC PSP*TV GS SA*AT
Sbjct: 531 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*ATK 352
Query: 115 *LTTRPSSMHMRGPYVLKIRAIXT 44
LTTR SSMH+ GPYVL IRA+ T
Sbjct: 351 LLTTRSSSMHILGPYVLNIRAMRT 280
Score = 105 bits (224), Expect(2) = 3e-023
Identities = 43/98 (43%), Positives = 66/98 (67%)
Frame = -3 / -1
Query: 338 ELDPCVGVDGVLDNXGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSIT 159
E +PC + N KL H EL+ +A+++ S M+ FHQ +Q+++QIRNIL+ L ++T
Sbjct: 574 EFNPCTRIYCFFHNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNILKATCLFTVT 395
Query: 158 INRQWLXXQCLSNXLTDNTAIVNAHARAICVEDTCDXN 45
IN Q QCLSN + +NT I++AH+ +ICVE TC+ +
Sbjct: 394 INCQRFFAQCLSNKVANNTVIIDAHSGSICVEYTCNAD 281
Score = 23.1 bits (44), Expect(2) = 3e-023
Identities = 6/27 (22%), Positives = 17/27 (62%)
Frame = -3 / -1
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKEL 396
++ A++ DH+ K+ + + W P +++
Sbjct: 712 KNTFAKIFDHQRKSFPQRNSWFPLQKI 632
>gb|BE496383.1|BE496383 NXCI_017_A02_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_017_A02 5' similar to Arabidopsis
thaliana sequence At2g47650 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 567
Score = 278 bits (602), Expect = 3e-074
Identities = 115/144 (79%), Positives = 127/144 (88%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLV+GL++L
Sbjct: 56 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLIRL 235
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
ME HVGPFNLGNPGEFTMLELA VV++TID +ARIEF++NT DDPHKRKPDI +AK+LL
Sbjct: 236 MENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPHKRKPDITKAKDLL 415
Query: 405 GWEPKIPLREGLPLMVTDFRKRIF 476
WEP+I LRE LMV DFRKR+F
Sbjct: 416 KWEPRISLREXXXLMVEDFRKRVF 487
Score = 185 bits (398), Expect = 4e-046
Identities = 94/144 (65%), Positives = 104/144 (72%)
Frame = -1 / -1
Query: 475 KMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTT 296
K RLRKS T+ S + I GSH R S A +SG L GSS VF NSI AL S+VS+TT
Sbjct: 486 KTRLRKSSTINXXXSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 307
Query: 295 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX 116
ASS++VNSPGLPRL GPT SIS I PST+SETY KL VC PSP*TV GS SA*AT
Sbjct: 306 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*ATK 127
Query: 115 *LTTRPSSMHMRGPYVLKIRAIXT 44
LTTRPSSMH+ GPYVL IRA+ T
Sbjct: 126 LLTTRPSSMHILGPYVLNIRAMRT 55
Score = 111 bits (236), Expect = 9e-024
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = -3 / -3
Query: 338 ELDPCVGVDGVLDNXGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSIT 159
E +PC + N KL H EL+ +A+++ S M+ FHQ +Q+++QIRNIL+ P L ++T
Sbjct: 349 EFNPCTRIYCFFHNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNILKAPCLFTVT 170
Query: 158 INRQWLXXQCLSNXLTDNTAIVNAHARAICVEDTCDXN 45
IN Q QCLSN + +NTAI++AH+ +ICVE TC+ +
Sbjct: 169 INCQRFFAQCLSNKVANNTAIIDAHSGSICVEYTCNAD 56
>gb|DR081469.1|DR081469 RTFEPL1_29_G11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_29_G11_A029 5', mRNA sequence
Length = 667
Score = 273 bits (591), Expect = 9e-073
Identities = 111/136 (81%), Positives = 123/136 (90%)
Frame = +3 / +2
Query: 69 TYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGP 248
TYGPRMCIDDGRVVS VAQAL EPLTVYGDGKQTRSFQYVSDLV+GL++LME HVGP
Sbjct: 2 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLIRLMENNHVGP 181
Query: 249 FNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPL 428
FNLGNPGEFTMLELA VV++TID +ARIEF++NT DDPHKRKPDI +AK+LL WEP+I L
Sbjct: 182 FNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRISL 361
Query: 429 REGLPLMVTDFRKRIF 476
REGLPLMV DFRKR+F
Sbjct: 362 REGLPLMVEDFRKRVF 409
Score = 182 bits (392), Expect = 3e-045
Identities = 91/136 (66%), Positives = 100/136 (73%)
Frame = -1 / -2
Query: 475 KMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTT 296
K RLRKS T+ G PS + I GSH R S A +SG L GSS VF NSI AL S+VS+TT
Sbjct: 408 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 229
Query: 295 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX 116
ASS++VNSPGLPRL GPT SIS I PST+SETY KL VC PSP*TV GS SA*AT
Sbjct: 228 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*ATK 49
Query: 115 *LTTRPSSMHMRGPYV 68
LTTRPSSMH+ GPYV
Sbjct: 48 LLTTRPSSMHILGPYV 1
Score = 100 bits (214), Expect(2) = 7e-022
Identities = 41/90 (45%), Positives = 62/90 (68%)
Frame = -3 / -1
Query: 338 ELDPCVGVDGVLDNXGKLQHGELAGVAQVKWSYMLAFHQLHQTLDQIRNILETPGLLSIT 159
E +PC + N KL H EL+ +A+++ S M+ FHQ +Q+++QIRNIL+ P L ++T
Sbjct: 271 EFNPCTRIYCFFHNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNILKAPCLFTVT 92
Query: 158 INRQWLXXQCLSNXLTDNTAIVNAHARAIC 69
IN Q QCLSN + +NTAI++AH+ +IC
Sbjct: 91 INCQRFFAQCLSNKVANNTAIIDAHSGSIC 2
Score = 23.1 bits (44), Expect(2) = 7e-022
Identities = 6/27 (22%), Positives = 17/27 (62%)
Frame = -3 / -1
Query: 476 EDALAEVGDHEGKALAEGDLWLPPKEL 396
++ A++ DH+ K+ + + W P +++
Sbjct: 409 KNTFAKIFDHQRKSFPQRNSWFPLQKI 329
>gb|DR079740.1|DR079740 RTFEPL1_17_F12.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_17_F12_A029 3', mRNA sequence
Length = 784
Score = 252 bits (545), Expect = 2e-066
Identities = 101/122 (82%), Positives = 113/122 (92%)
Frame = +3 / +3
Query: 120 VAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXV 299
VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA V
Sbjct: 6 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQV 185
Query: 300 VQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFG 479
V++TID NA+IEFR NT DDPHKRKPDI +AK+LLGWEPK+ LR+GLPLMV DFR+R+FG
Sbjct: 186 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFG 365
Query: 480 DQ 485
D+
Sbjct: 366 DE 371
Score = 182 bits (393), Expect = 2e-045
Identities = 85/121 (70%), Positives = 91/121 (75%)
Frame = -1 / -1
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RKS T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+
Sbjct: 367 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 188
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*A 122
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TV GS A*A
Sbjct: 187 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 8
Query: 121 T 119
T
Sbjct: 7 T 5
>gb|DR691657.1|DR691657 EST1081744 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADB24 3' end, mRNA sequence
Length = 831
Score = 246 bits (532), Expect = 1e-064
Identities = 102/121 (84%), Positives = 110/121 (90%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+L
Sbjct: 469 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 648
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGEHVGPFNLGNPGEFTMLELA VV++ ID NA+IEFR NT DDPHKRKPDI +AK+LL
Sbjct: 649 MEGEHVGPFNLGNPGEFTMLELAQVVKEAIDTNAKIEFRPNTEDDPHKRKPDITKAKDLL 828
Query: 405 G 407
G
Sbjct: 829 G 831
Score = 193 bits (417), Expect = 9e-049
Identities = 89/121 (73%), Positives = 95/121 (78%)
Frame = -1 / -2
Query: 406 PRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPS 227
P S A +SG LCGSS VF NSI AL S+ S+TT ASS++VNSPG PRLNGPTCSPS
Sbjct: 830 PSRSFALVISGFLLCGSSSVFGLNSIFALVSIASFTTCASSNIVNSPGFPRLNGPTCSPS 651
Query: 226 ISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAIX 47
IS IRPSTRSET WKL VCFPSP*TV GS A*AT LTTRPSS H+RGPYVLKIRAI
Sbjct: 650 ISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*ATKLLTTRPSSRHIRGPYVLKIRAIR 471
Query: 46 T 44
T
Sbjct: 470 T 468
>gb|AW888189.1|AW888189 NXNV_105_F12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_105_F12 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 480
Score = 243 bits (524), Expect = 2e-063
Identities = 97/121 (80%), Positives = 109/121 (90%)
Frame = +3 / +2
Query: 120 VAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXV 299
VA L EPLTVYGDGKQTRSFQ+VSDLVEGLM+LM+GEHVGPFNLGNPGEFTMLELA V
Sbjct: 2 VAXXLRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMDGEHVGPFNLGNPGEFTMLELAQV 181
Query: 300 VQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFG 479
V++TID NA+IEFR NT DDPHKRKPDI +AK+LLGWEPK+ LR+GLPLMV FR+R+FG
Sbjct: 182 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVXXFRRRVFG 361
Query: 480 D 482
D
Sbjct: 362 D 364
Score = 179 bits (385), Expect = 2e-044
Identities = 83/121 (68%), Positives = 89/121 (73%)
Frame = -1 / -1
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RK T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+
Sbjct: 363 SPKTRRRKXSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 184
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*A 122
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TV GS *A
Sbjct: 183 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKX*A 4
Query: 121 T 119
T
Sbjct: 3 T 1
>gb|BQ654839.1|BQ654839 NXRV086_D03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV086_D03 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 694
Score = 241 bits (520), Expect = 6e-063
Identities = 99/124 (79%), Positives = 111/124 (89%)
Frame = +3 / +1
Query: 105 VVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTML 284
VVS VAQAL EPLTVYGDGKQTRSFQYVSDLV+GL++LME HVGPFNLGNPGEFTML
Sbjct: 1 VVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTML 180
Query: 285 ELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFR 464
ELA VV++TID +ARIEF++NT DDPHKRKPDI +AK+LL WEP+I LREGLPLMV DFR
Sbjct: 181 ELAQVVKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRISLREGLPLMVEDFR 360
Query: 465 KRIF 476
KR+F
Sbjct: 361 KRVF 372
Score = 154 bits (331), Expect = 7e-037
Identities = 80/123 (65%), Positives = 88/123 (71%)
Frame = -1 / -3
Query: 475 KMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTT 296
K RLRKS T+ G PS + I GSH R S A +SG L GSS VF NSI AL S+VS+TT
Sbjct: 371 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 192
Query: 295 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX 116
ASS++VNSPGLPRL GPT SIS I PST+SETY KL VC PSP*TV GS SA*AT
Sbjct: 191 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*ATK 12
Query: 115 *LT 107
LT
Sbjct: 11 LLT 3
>gb|BX255353.1|BX255353 BX255353 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP004G08 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 495
Score = 237 bits (512), Expect = 7e-062
Identities = 98/113 (86%), Positives = 104/113 (92%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+L
Sbjct: 149 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 328
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDI 383
MEGEHVGPFNLGNPGEFTMLELA VV++TID NA+IEFR NT DDPHKRKPDI
Sbjct: 329 MEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDI 487
Score = 188 bits (406), Expect = 3e-047
Identities = 86/113 (76%), Positives = 92/113 (81%)
Frame = -1 / -1
Query: 382 MSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPST 203
+SG LCGSS VF NSI AL S+VS+TT ASS++VNSPG PRL GPTCSPSIS IRPST
Sbjct: 486 ISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGFPRLKGPTCSPSISRIRPST 307
Query: 202 RSETYWKLLVCFPSP*TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAIXT 44
RSET WKL VCFPSP*TV GS A*AT LTTRPSS H+RGPYVLKIRAI T
Sbjct: 306 RSETNWKLRVCFPSP*TVKGSLRKA*ATKLLTTRPSSRHIRGPYVLKIRAIRT 148
>gb|CO370420.1|CO370420 RTK1_67_F07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_67_F07_A029 5', mRNA sequence
Length = 734
Score = 232 bits (501), Expect = 2e-060
Identities = 99/153 (64%), Positives = 117/153 (76%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++L
Sbjct: 205 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRL 384
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGE+ GP NLGNPGEFTMLELA V++ I+P+A ++ +NT DDP RKPDI +AK LL
Sbjct: 385 MEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLL 564
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQDTAAAT 503
GWEPK+ LREGLP M DFR R+ + A AT
Sbjct: 565 GWEPKVSLREGLPRMAEDFRLRLNVPKK*AVAT 663
Score = 115 bits (245), Expect(2) = 2e-035
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = -1 / -1
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 485 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 306
Query: 145 GSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
S SA A LTTRPSSM MRGP VLKIRA+
Sbjct: 305 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAM 210
Score = 54.2 bits (112), Expect(2) = 2e-035
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = -1 / -1
Query: 502 VAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
VA A + R RKS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 662 VATAHFFGTFNRRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 504
>gb|CV033876.1|CV033876 RTNACL1_37_D08.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_37_D08_A029 3', mRNA sequence
Length = 855
Score = 232 bits (501), Expect = 2e-060
Identities = 95/143 (66%), Positives = 114/143 (79%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL EP+TV G QTRSF YVSD+V+GL++L
Sbjct: 76 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRL 255
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG++ GP NLGNPGEFTMLELA V++ I+ + +E +NT DDP KRKPDI +A LL
Sbjct: 256 MEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDDPRKRKPDITKATTLL 435
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
GWEPK+ LREGLPLM DFR+R+
Sbjct: 436 GWEPKVTLREGLPLMAEDFRERL 504
Score = 149 bits (319), Expect = 3e-035
Identities = 81/140 (57%), Positives = 90/140 (64%)
Frame = -1 / -2
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLA 290
R RKS + G PSR+ GSHPRS +A MSG L GSS VF S S+ S+T A
Sbjct: 500 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASA 321
Query: 289 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*L 110
SSS+VNSPG PR GP SPSIS I+PST SET KL VC P TV GS A*A L
Sbjct: 320 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*AIKLL 141
Query: 109 TTRPSSMHMRGPYVLKIRAI 50
TTRPSSM +RGP VL IRA+
Sbjct: 140 TTRPSSMFIRGP*VLNIRAM 81
>gb|CV036240.1|CV036240 RTNACL1_57_F03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_57_F03_A029 5', mRNA sequence
Length = 777
Score = 232 bits (501), Expect = 2e-060
Identities = 99/153 (64%), Positives = 117/153 (76%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++L
Sbjct: 53 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRL 232
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGE+ GP NLGNPGEFTMLELA V++ I+P+A ++ +NT DDP RKPDI +AK LL
Sbjct: 233 MEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLL 412
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQDTAAAT 503
GWEPK+ LREGLP M DFR R+ + A AT
Sbjct: 413 GWEPKVSLREGLPRMAEDFRLRLNVPKK*AVAT 511
Score = 115 bits (245), Expect(2) = 2e-035
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = -1 / -1
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 333 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 154
Query: 145 GSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
S SA A LTTRPSSM MRGP VLKIRA+
Sbjct: 153 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAM 58
Score = 54.2 bits (112), Expect(2) = 2e-035
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = -1 / -1
Query: 502 VAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
VA A + R RKS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 510 VATAHFFGTFNRRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 352
>gb|CX646821.1|CX646821 COLD1_11_E12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_E12_A029 5', mRNA sequence
Length = 835
Score = 232 bits (501), Expect = 2e-060
Identities = 99/153 (64%), Positives = 117/153 (76%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++L
Sbjct: 168 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRL 347
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGE+ GP NLGNPGEFTMLELA V++ I+P+A ++ +NT DDP RKPDI +AK LL
Sbjct: 348 MEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLL 527
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQDTAAAT 503
GWEPK+ LREGLP M DFR R+ + A AT
Sbjct: 528 GWEPKVSLREGLPRMAEDFRLRLNVPKK*AVAT 626
Score = 115 bits (245), Expect(2) = 2e-035
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = -1 / -1
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 448 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 269
Query: 145 GSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
S SA A LTTRPSSM MRGP VLKIRA+
Sbjct: 268 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAM 173
Score = 54.2 bits (112), Expect(2) = 2e-035
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = -1 / -1
Query: 502 VAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
VA A + R RKS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 625 VATAHFFGTFNRRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 467
>gb|DR048632.1|DR048632 RTBOR1_10_E05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_10_E05_A029 3', mRNA sequence
Length = 868
Score = 232 bits (501), Expect = 2e-060
Identities = 99/153 (64%), Positives = 117/153 (76%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++L
Sbjct: 22 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRL 201
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGE+ GP NLGNPGEFTMLELA V++ I+P+A ++ +NT DDP RKPDI +AK LL
Sbjct: 202 MEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLL 381
Query: 405 GWEPKIPLREGLPLMVTDFRKRIFGDQDTAAAT 503
GWEPK+ LREGLP M DFR R+ + A AT
Sbjct: 382 GWEPKVSLREGLPRMAEDFRLRLNVPKK*AVAT 480
Score = 115 bits (245), Expect(2) = 2e-035
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = -1 / -3
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 302 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 123
Query: 145 GSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
S SA A LTTRPSSM MRGP VLKIRA+
Sbjct: 122 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAM 27
Score = 54.2 bits (112), Expect(2) = 2e-035
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = -1 / -3
Query: 502 VAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
VA A + R RKS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 479 VATAHFFGTFNRRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 321
>gb|DR055465.1|DR055465 RTCA1_23_G10.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_G10_A029 5', mRNA sequence
Length = 637
Score = 232 bits (501), Expect = 2e-060
Identities = 95/143 (66%), Positives = 114/143 (79%)
Frame = +3 / -1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL EP+TV G QTRSF YVSD+V+GL++L
Sbjct: 625 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRL 446
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG++ GP NLGNPGEFTMLELA V++ I+ + +E +NT DDP KRKPDI +A LL
Sbjct: 445 MEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDDPRKRKPDITKATTLL 266
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
GWEPK+ LREGLPLM DFR+R+
Sbjct: 265 GWEPKVTLREGLPLMAEDFRERL 197
Score = 150 bits (322), Expect = 1e-035
Identities = 82/140 (58%), Positives = 90/140 (64%)
Frame = -1 / +3
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLA 290
R RKS + G PSR+ GSHPRS +A MSG L GSS VF S S+ S+T A
Sbjct: 201 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASA 380
Query: 289 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*L 110
SSS+VNSPG PR GP SPSIS I+PST SET KL VC P TV GS A*A L
Sbjct: 381 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*AIKLL 560
Query: 109 TTRPSSMHMRGPYVLKIRAI 50
TTRPSSM +RGP VL IRAI
Sbjct: 561 TTRPSSMFIRGP*VLNIRAI 620
>gb|BX254029.1|BX254029 BX254029 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP092D07 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 691
Score = 232 bits (500), Expect = 3e-060
Identities = 96/143 (67%), Positives = 114/143 (79%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++L
Sbjct: 199 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRL 378
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGE+ GP NLGNPGEFTMLELA V++ I+P+A+++ +NT DDP RKPDI +AK LL
Sbjct: 379 MEGENTGPINLGNPGEFTMLELAEAVKELIEPSAQLKMTENTPDDPRMRKPDITKAKTLL 558
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
GWEPK+ LREGLP M DFR R+
Sbjct: 559 GWEPKVSLREGLPRMAEDFRLRL 627
Score = 115 bits (245), Expect(2) = 4e-035
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = -1 / -3
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 479 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 300
Query: 145 GSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
S SA A LTTRPSSM MRGP VLKIRA+
Sbjct: 299 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAM 204
Score = 53.3 bits (110), Expect(2) = 4e-035
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = -1 / -3
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 623 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 498
>gb|CX650237.1|CX650237 COLD1_44_H04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_44_H04_A029 3', mRNA sequence
Length = 791
Score = 232 bits (500), Expect = 3e-060
Identities = 95/143 (66%), Positives = 114/143 (79%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL EP+TV G QTRSF YVSD+V+GL++L
Sbjct: 148 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRL 327
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG++ GP NLGNPGEFTMLELA V++ I+ + +E +NT DDP KRKPDI +A LL
Sbjct: 328 MEGDNTGPINLGNPGEFTMLELAEAVKEFIETSTTVEMVENTPDDPRKRKPDITKATTLL 507
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
GWEPK+ LREGLPLM DFR+R+
Sbjct: 508 GWEPKVTLREGLPLMAEDFRERL 576
Score = 148 bits (318), Expect = 4e-035
Identities = 81/140 (57%), Positives = 90/140 (64%)
Frame = -1 / -1
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLA 290
R RKS + G PSR+ GSHPRS +A MSG L GSS VF S S+ S+T A
Sbjct: 572 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSINSFTASA 393
Query: 289 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*L 110
SSS+VNSPG PR GP SPSIS I+PST SET KL VC P TV GS A*A L
Sbjct: 392 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*AIKLL 213
Query: 109 TTRPSSMHMRGPYVLKIRAI 50
TTRPSSM +RGP VL IRA+
Sbjct: 212 TTRPSSMFIRGP*VLNIRAM 153
>gb|DR688096.1|DR688096 EST1078180 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC049 3' end, mRNA sequence
Length = 544
Score = 231 bits (499), Expect = 5e-060
Identities = 96/143 (67%), Positives = 113/143 (79%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++L
Sbjct: 14 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRL 193
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGE+ GP NLGNPGEFTMLELA V++ I+P+A ++ +NT DDP RKPDI +AK LL
Sbjct: 194 MEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLL 373
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
GWEPK+ LREGLP M DFR R+
Sbjct: 374 GWEPKVSLREGLPRMAEDFRLRL 442
Score = 115 bits (245), Expect(2) = 4e-035
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = -1 / -2
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 294 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 115
Query: 145 GSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
S SA A LTTRPSSM MRGP VLKIRA+
Sbjct: 114 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAM 19
Score = 53.3 bits (110), Expect(2) = 4e-035
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = -1 / -2
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 438 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 313
>gb|BX253086.1|BX253086 BX253086 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP077G04 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 620
Score = 231 bits (498), Expect = 6e-060
Identities = 96/141 (68%), Positives = 113/141 (80%)
Frame = +3 / +2
Query: 51 IARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLME 230
IARIFNTYGPRM IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++LME
Sbjct: 5 IARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLME 184
Query: 231 GEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGW 410
GE+ GP NLGNPGEFTMLELA V++ I+P+A+++ +NT DDP RKPDI +AK LLGW
Sbjct: 185 GENTGPINLGNPGEFTMLELAEAVKELIEPSAQLKMTENTPDDPRMRKPDITKAKTLLGW 364
Query: 411 EPKIPLREGLPLMVTDFRKRI 473
EPK+ LREGLP M DFR R+
Sbjct: 365 EPKVSLREGLPRMAEDFRLRL 427
Score = 115 bits (245), Expect(2) = 4e-035
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = -1 / -3
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 279 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 100
Query: 145 GSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
S SA A LTTRPSSM MRGP VLKIRA+
Sbjct: 99 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAM 4
Score = 53.3 bits (110), Expect(2) = 4e-035
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = -1 / -3
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 423 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 298
>gb|CO162913.1|CO162913 FLD1_38_G02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_38_G02_A029 3', mRNA sequence
Length = 870
Score = 229 bits (495), Expect = 2e-059
Identities = 94/143 (65%), Positives = 113/143 (79%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL EP+TV G Q RSF YVSD+V+GL++L
Sbjct: 234 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQIRSFCYVSDMVDGLIRL 413
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG++ GP NLGNPGEFTMLELA V++ I+ + +E +NT DDP KRKPDI +A LL
Sbjct: 414 MEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDDPRKRKPDITKATTLL 593
Query: 405 GWEPKIPLREGLPLMVTDFRKRI 473
GWEPK+ LREGLPLM DFR+R+
Sbjct: 594 GWEPKVTLREGLPLMAEDFRERL 662
Score = 149 bits (321), Expect = 2e-035
Identities = 81/140 (57%), Positives = 90/140 (64%)
Frame = -1 / -3
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLA 290
R RKS + G PSR+ GSHPRS +A MSG L GSS VF S S+ S+T A
Sbjct: 658 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASA 479
Query: 289 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*L 110
SSS+VNSPG PR GP SPSIS I+PST SET KL +C P TV GS A*A L
Sbjct: 478 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRICVPGAWTVIGSPLRA*AIKLL 299
Query: 109 TTRPSSMHMRGPYVLKIRAI 50
TTRPSSM +RGP VL IRAI
Sbjct: 298 TTRPSSMFIRGP*VLNIRAI 239
>gb|BG526951.1|BG526951 NXPV_057_G05_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_057_G05 5' similar to Arabidopsis
thaliana sequence At2g47650 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 609
Score = 228 bits (493), Expect = 3e-059
Identities = 95/113 (84%), Positives = 101/113 (89%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVE M+L
Sbjct: 251 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEXXMRL 430
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDI 383
MEGEHVGPFNLGNP EFTMLELA VV++TID NA+IEFR NT DDPHKRKPDI
Sbjct: 431 MEGEHVGPFNLGNPXEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDI 589
Score = 180 bits (388), Expect = 9e-045
Identities = 84/113 (74%), Positives = 90/113 (79%)
Frame = -1 / -1
Query: 382 MSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPST 203
+SG LCGSS VF NSI AL S+VS+TT ASS++VNS G PRLNGPTCSPSIS I ST
Sbjct: 588 ISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSXGFPRLNGPTCSPSISRIXXST 409
Query: 202 RSETYWKLLVCFPSP*TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAIXT 44
RSET WKL VCFPSP*TV GS A*AT LTTRPSS H+RGPYVLKIRAI T
Sbjct: 408 RSETNWKLRVCFPSP*TVKGSLRKA*ATKLLTTRPSSRHIRGPYVLKIRAIRT 250
>gb|CO166920.1|CO166920 FLD1_65_A12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_65_A12_A029 5', mRNA sequence
Length = 794
Score = 226 bits (488), Expect = 2e-058
Identities = 93/141 (65%), Positives = 111/141 (78%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL EP+TV G QTRSF YVSD+V+GL++L
Sbjct: 372 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRL 551
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG++ GP NLGNPGEFTMLELA V + I+ + ++ +NT DDP KRKPDI +A LL
Sbjct: 552 MEGDNTGPINLGNPGEFTMLELAEAVNELIETSTTVQMVENTPDDPRKRKPDITKATTLL 731
Query: 405 GWEPKIPLREGLPLMVTDFRK 467
GWEPK+ LREGLPLM DFR+
Sbjct: 732 GWEPKVILREGLPLMAEDFRE 794
Score = 110 bits (235), Expect(2) = 4e-032
Identities = 57/89 (64%), Positives = 62/89 (69%)
Frame = -1 / -2
Query: 316 SMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSF 137
S+ S+T ASSS+VNSPG PR GP SPSIS I+PST SET KL VC P TV GS
Sbjct: 643 SISSFTASASSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSP 464
Query: 136 XSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM +RGP VL IRAI
Sbjct: 463 LRA*AIKLLTTRPSSMFIRGP*VLNIRAI 377
Score = 47.8 bits (98), Expect(2) = 4e-032
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = -1 / -2
Query: 463 RKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
RKS + G PSR+ GSHPRS +A MSG L GSS VF
Sbjct: 790 RKSSAISGSPSRKITLGSHPRSVVAFVMSGFLLRGSSGVF 671
>gb|DR023386.1|DR023386 STRS1_57_F01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_57_F01_A034 3', mRNA sequence
Length = 812
Score = 226 bits (488), Expect = 2e-058
Identities = 89/108 (82%), Positives = 101/108 (93%)
Frame = +3 / +2
Query: 162 DGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFR 341
DGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA VV++TID NA+IEFR
Sbjct: 2 DGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFR 181
Query: 342 QNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQ 485
NT DDPHKRKPDI +AK+LLGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 182 PNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 325
Score = 164 bits (353), Expect = 6e-040
Identities = 75/107 (70%), Positives = 81/107 (75%)
Frame = -1 / -3
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RKS T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+
Sbjct: 321 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 142
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPS 161
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPS
Sbjct: 141 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPS 1
>gb|DR061070.1|DR061070 RTNIT1_31_H03.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_31_H03_A029 5', mRNA sequence
Length = 683
Score = 222 bits (480), Expect = 2e-057
Identities = 93/139 (66%), Positives = 109/139 (78%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++L
Sbjct: 247 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRL 426
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGE+ GP NLGNPGEFTMLELA V++ I+P+A ++ +NT DDP RKPDI +AK LL
Sbjct: 427 MEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLL 606
Query: 405 GWEPKIPLREGLPLMVTDF 461
GWEP + LREGLP M DF
Sbjct: 607 GWEP*VSLREGLPRMAEDF 663
Score = 115 bits (245), Expect(2) = 2e-033
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = -1 / -1
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 527 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 348
Query: 145 GSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
S SA A LTTRPSSM MRGP VLKIRA+
Sbjct: 347 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAM 252
Score = 47.8 bits (98), Expect(2) = 2e-033
Identities = 23/39 (58%), Positives = 25/39 (64%)
Frame = -1 / -1
Query: 460 KSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
KS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 662 KSSAIRGRPSRRET*GSHPRRVFAFVMSGFLIRGSSGVF 546
>gb|CF389128.1|CF389128 RTDR2_13_D11.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_13_D11_A021 5', mRNA
sequence
Length = 679
Score = 221 bits (478), Expect = 4e-057
Identities = 92/135 (68%), Positives = 108/135 (80%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++L
Sbjct: 271 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRL 450
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGE+ GP NLGNPGEFTMLELA V++ I+P+A ++ +NT DDP RKPDI +AK LL
Sbjct: 451 MEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLL 630
Query: 405 GWEPKIPLREGLPLM 449
GWEPK+ LREGLP M
Sbjct: 631 GWEPKVSLREGLPRM 675
Score = 115 bits (245), Expect(2) = 5e-033
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = -1 / -3
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 551 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 372
Query: 145 GSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
S SA A LTTRPSSM MRGP VLKIRA+
Sbjct: 371 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAM 276
Score = 46.4 bits (95), Expect(2) = 5e-033
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -1 / -3
Query: 448 MRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
+RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 674 IRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 570
>gb|DR092087.1|DR092087 RTAL1_26_E11.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_26_E11_A029 3', mRNA sequence
Length = 598
Score = 216 bits (466), Expect = 2e-055
Identities = 85/104 (81%), Positives = 97/104 (93%)
Frame = +3 / +2
Query: 174 TRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTX 353
TRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA VV++TID NA+IEFR NT
Sbjct: 2 TRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTE 181
Query: 354 DDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQ 485
DDPHKRKPDI +AK+LLGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 182 DDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 313
Score = 152 bits (327), Expect = 2e-036
Identities = 71/103 (68%), Positives = 77/103 (74%)
Frame = -1 / -2
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RKS T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+
Sbjct: 309 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 130
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLV 173
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL V
Sbjct: 129 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRV 1
>gb|DR049907.1|DR049907 RTBOR1_19_H03.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_19_H03_A029 5', mRNA sequence
Length = 789
Score = 153 bits (329), Expect(2) = 5e-055
Identities = 65/92 (70%), Positives = 75/92 (81%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++L
Sbjct: 82 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRL 261
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDP 320
MEGE+ GP NLGNPGEFTMLELA V++ I+P
Sbjct: 262 MEGENTGPINLGNPGEFTMLELAEAVKELIEP 357
Score = 114 bits (244), Expect(2) = 3e-035
Identities = 59/90 (65%), Positives = 64/90 (71%)
Frame = -1 / -2
Query: 319 GSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+ S
Sbjct: 356 GSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSS 177
Query: 139 FXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
SA A LTTRPSSM MRGP VLKIRA+
Sbjct: 176 PLSACAMKLLTTRPSSMFMRGP*VLKIRAM 87
Score = 81.7 bits (172), Expect(2) = 5e-055
Identities = 34/61 (55%), Positives = 42/61 (68%)
Frame = +3 / +3
Query: 321 NARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQDTAAA 500
+A ++ +NT DDP RKPDI +AK LLGWEPK+ LREGLP M DFR R+ + A A
Sbjct: 357 SAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNVPKK*AVA 536
Query: 501 T 503
T
Sbjct: 537 T 539
Score = 54.2 bits (112), Expect(2) = 3e-035
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = -1 / -3
Query: 502 VAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
VA A + R RKS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 538 VATAHFFGTFNRRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 380
>gb|CO169434.1|CO169434 NDL1_7_B11.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_B11_A029 3', mRNA sequence
Length = 729
Score = 149 bits (320), Expect(2) = 4e-054
Identities = 62/88 (70%), Positives = 73/88 (82%)
Frame = +3 / +1
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL EP+TV G QTRSF YVSD+V+GL++L
Sbjct: 112 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRL 291
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQD 308
MEG++ GP NLGNPGEFTMLELA V++
Sbjct: 292 MEGDNTGPINLGNPGEFTMLELAEAVKE 375
Score = 109 bits (233), Expect(2) = 2e-032
Identities = 56/87 (64%), Positives = 61/87 (70%)
Frame = -1 / -2
Query: 310 VSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXS 131
+S+T ASSS+VNSPG PR GP SPSIS I+PST SET KL VC P TV GS
Sbjct: 377 LSFTASASSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLR 198
Query: 130 A*ATX*LTTRPSSMHMRGPYVLKIRAI 50
A*A LTTRPSSM +RGP VL IRAI
Sbjct: 197 A*AIKLLTTRPSSMFIRGP*VLNIRAI 117
Score = 82.6 bits (174), Expect(2) = 4e-054
Identities = 32/47 (68%), Positives = 37/47 (78%)
Frame = +3 / +3
Query: 333 EFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRI 473
E +NT DDP KRKPDI +A LLGWEPK+ LREGLPLM DFR+R+
Sbjct: 375 EMVENTPDDPRKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERL 515
Score = 49.6 bits (102), Expect(2) = 2e-032
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = -1 / -3
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
R RKS + G PSR+ GSHPRS +A MSG L GSS VF
Sbjct: 511 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVF 386
>gb|BE644028.1|BE644028 NXCI_053_G03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_053_G03 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 460
Score = 208 bits (448), Expect = 5e-053
Identities = 87/135 (64%), Positives = 103/135 (76%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL EP+TV G QTRSF YVSD+V+GL++L
Sbjct: 36 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRL 215
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG++ GP NLGNPGEFTMLELA V++ I+ + +E +NT DDP K KPDI +A LL
Sbjct: 216 MEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDDPRKXKPDITKATTLL 395
Query: 405 GWEPKIPLREGLPLM 449
GWEP LR LPLM
Sbjct: 396 GWEPXXTLRXXLPLM 440
Score = 139 bits (298), Expect = 2e-032
Identities = 78/140 (55%), Positives = 86/140 (61%)
Frame = -1 / -1
Query: 469 RLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLA 290
R R + G R+ GSHPRS +A MSG L GSS VF S S+ S+T A
Sbjct: 460 RSRXXSAISGXXXRKVXXGSHPRSVVAFVMSGXXLRGSSGVFSTISTVVDVSISSFTASA 281
Query: 289 SSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*L 110
SSS+VNSPG PR GP SPSIS I+PST SET KL VC P TV GS A*A L
Sbjct: 280 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*AIKLL 101
Query: 109 TTRPSSMHMRGPYVLKIRAI 50
TTRPSSM +RGP VL IRAI
Sbjct: 100 TTRPSSMFIRGP*VLNIRAI 41
>gb|DR072584.1|DR072584 RTDK1_27_F10.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_27_F10_A029 3', mRNA sequence
Length = 586
Score = 204 bits (441), Expect = 5e-052
Identities = 80/99 (80%), Positives = 92/99 (92%)
Frame = +3 / +3
Query: 189 YVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHK 368
+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA VV++TID NA+IEFR NT DDPHK
Sbjct: 3 FVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHK 182
Query: 369 RKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFGDQ 485
RKPDI +AK+LLGWEPK+ LR+GLPLMV DFR+R+FGD+
Sbjct: 183 RKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDE 299
Score = 143 bits (307), Expect = 1e-033
Identities = 67/97 (69%), Positives = 73/97 (75%)
Frame = -1 / -1
Query: 481 SPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSW 302
SPK R RKS T+RGRP R GS P S A +SG LCGSS VF NSI AL S+VS+
Sbjct: 295 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 116
Query: 301 TTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSET 191
TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET
Sbjct: 115 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSET 5
>gb|CX646741.1|CX646741 COLD1_11_E12.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_E12_A029 3', mRNA sequence
Length = 822
Score = 204 bits (440), Expect = 6e-052
Identities = 88/140 (62%), Positives = 105/140 (75%)
Frame = +3 / +2
Query: 84 MCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGN 263
M IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGN
Sbjct: 2 MNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGN 181
Query: 264 PGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLP 443
PGEFTMLELA V++ I+P+A ++ +NT DDP RKPDI +AK LLGWEPK+ LREGLP
Sbjct: 182 PGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLP 361
Query: 444 LMVTDFRKRIFGDQDTAAAT 503
M DFR R+ + A AT
Sbjct: 362 RMAEDFRLRLNVPKK*AVAT 421
Score = 96.4 bits (204), Expect(2) = 9e-030
Identities = 51/81 (62%), Positives = 55/81 (67%)
Frame = -1 / -1
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 243 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 64
Query: 145 GSFXSA*ATX*LTTRPSSMHM 83
S SA A LTTRPSSM M
Sbjct: 63 SSPLSACAMKLLTTRPSSMFM 1
Score = 54.2 bits (112), Expect(2) = 9e-030
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = -1 / -1
Query: 502 VAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
VA A + R RKS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 420 VATAHFFGTFNRRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 262
>gb|DR071320.1|DR071320 RTDK1_19_C12.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_C12_A029 3', mRNA sequence
Length = 809
Score = 204 bits (440), Expect = 6e-052
Identities = 88/140 (62%), Positives = 105/140 (75%)
Frame = +3 / +3
Query: 84 MCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGN 263
M IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGN
Sbjct: 3 MNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGN 182
Query: 264 PGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLP 443
PGEFTMLELA V++ I+P+A ++ +NT DDP RKPDI +AK LLGWEPK+ LREGLP
Sbjct: 183 PGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLP 362
Query: 444 LMVTDFRKRIFGDQDTAAAT 503
M DFR R+ + A AT
Sbjct: 363 RMAEDFRLRLNVPKK*AVAT 422
Score = 96.4 bits (204), Expect(2) = 9e-030
Identities = 51/81 (62%), Positives = 55/81 (67%)
Frame = -1 / -2
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 244 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 65
Query: 145 GSFXSA*ATX*LTTRPSSMHM 83
S SA A LTTRPSSM M
Sbjct: 64 SSPLSACAMKLLTTRPSSMFM 2
Score = 54.2 bits (112), Expect(2) = 9e-030
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = -1 / -2
Query: 502 VAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
VA A + R RKS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 421 VATAHFFGTFNRRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 263
>gb|AW758792.1|AW758792 NXNV_089_G04_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_089_G04 5' similar to Arabidopsis thaliana
sequence At2g47650 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 306
Score = 204 bits (439), Expect = 9e-052
Identities = 82/100 (82%), Positives = 90/100 (90%)
Frame = +3 / +1
Query: 141 EPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDP 320
EPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA VV++TID
Sbjct: 7 EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDT 186
Query: 321 NARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGL 440
NA+IEFR NT DDPHK KPDI +AK+LLGWEPK+ L L
Sbjct: 187 NAKIEFRPNTEDDPHKXKPDITKAKDLLGWEPKVSLXXXL 306
Score = 152 bits (327), Expect = 2e-036
Identities = 70/100 (70%), Positives = 75/100 (75%)
Frame = -1 / -2
Query: 439 RPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGL 260
R R GS P S A +SG LCGSS VF NSI AL S+VS+TT ASS++VNSPG
Sbjct: 305 RXXXRDTLGSQPSRSFALVISGXXLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGF 126
Query: 259 PRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGS 140
PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TV GS
Sbjct: 125 PRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGS 6
>gb|DT634473.1|DT634473 EST1149404 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG636 3' end, mRNA sequence
Length = 624
Score = 199 bits (430), Expect = 2e-050
Identities = 83/123 (67%), Positives = 98/123 (79%)
Frame = +3 / +2
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL E LTV G QTRSF YVSD+V+GL++L
Sbjct: 254 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRL 433
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEGE+ GP NLGNPGEFTMLELA V++ I+P+A ++ +NT DDP RKPDI +AK LL
Sbjct: 434 MEGENTGPINLGNPGEFTMLELAEAVKELIEPSAELKMTENTPDDPRMRKPDITKAKTLL 613
Query: 405 GWE 413
GWE
Sbjct: 614 GWE 622
Score = 115 bits (245), Expect(2) = 3e-028
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = -1 / -1
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 534 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 355
Query: 145 GSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAI 50
S SA A LTTRPSSM MRGP VLKIRA+
Sbjct: 354 SSPLSACAMKLLTTRPSSMFMRGP*VLKIRAM 259
Score = 30.4 bits (60), Expect(2) = 3e-028
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1 / -1
Query: 415 GSHPRSSLARPMSGLRLCGSSWVF 344
GSHPR A MSG + GSS VF
Sbjct: 624 GSHPRRVFAFVMSGFLIRGSSGVF 553
>gb|DT631983.1|DT631983 EST1146914 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFF10 3' end, mRNA sequence
Length = 817
Score = 194 bits (418), Expect = 7e-049
Identities = 81/93 (87%), Positives = 86/93 (92%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVEGLM+L
Sbjct: 537 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 716
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPN 323
MEGEHVGPFNLGNPGEFTMLELA VV++TID N
Sbjct: 717 MEGEHVGPFNLGNPGEFTMLELAQVVKETIDTN 815
Score = 169 bits (364), Expect = 2e-041
Identities = 75/94 (79%), Positives = 80/94 (85%)
Frame = -1 / -1
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
AL S+VS+TT ASS++VNSPG PRLNGPTCSPSIS IRPSTRSET WKL VCFPSP*TV
Sbjct: 817 ALVSIVSFTTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVK 638
Query: 145 GSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAIXT 44
GS A*AT LTTRPSS H+RGPYVLKIRAI T
Sbjct: 637 GSLRKA*ATKLLTTRPSSRHIRGPYVLKIRAIRT 536
>gb|DR081398.1|DR081398 RTFEPL1_29_G11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_29_G11_A029 3', mRNA sequence
Length = 802
Score = 192 bits (414), Expect = 2e-048
Identities = 76/97 (78%), Positives = 88/97 (90%)
Frame = +3 / +1
Query: 186 QYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPH 365
QYVSDLV+GL++LME HVGPFNLGNPGEFTMLELA VV++TID +ARIEF++NT DDPH
Sbjct: 1 QYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPH 180
Query: 366 KRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIF 476
KRKPDI +AK+LL WEP+I LREGLPLMV DFRKR+F
Sbjct: 181 KRKPDITKAKDLLKWEPRISLREGLPLMVEDFRKRVF 291
Score = 120 bits (256), Expect = 2e-026
Identities = 61/96 (63%), Positives = 69/96 (71%)
Frame = -1 / -3
Query: 475 KMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTT 296
K RLRKS T+ G PS + I GSH R S A +SG L GSS VF NSI AL S+VS+TT
Sbjct: 290 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 111
Query: 295 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETY 188
ASS++VNSPGLPRL GPT SIS I PST+SETY
Sbjct: 110 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY 3
>gb|AW758946.1|AW758946 NXNV_095_F06_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_095_F06 5' similar to Arabidopsis thaliana
sequence At2g47650 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 330
Score = 190 bits (410), Expect = 9e-048
Identities = 83/101 (82%), Positives = 87/101 (86%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
V IARIFNTYGPRMC+DDGRVVS VAQAL EPLTVYGDGKQTRSFQ+VSDLVE LM+L
Sbjct: 24 VRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEXLMRL 203
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQN 347
MEGEHVGPFNLGN EFTMLELA V TID NA+IEF N
Sbjct: 204 MEGEHVGPFNLGNXXEFTMLELAXXVXXTIDTNAKIEFXPN 326
Score = 159 bits (341), Expect = 3e-038
Identities = 74/101 (73%), Positives = 79/101 (78%)
Frame = -1 / -3
Query: 346 F*RNSIRALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCF 167
F NSI AL S+V +T ASS++VNS PRLNGPTCSPSIS IR STRSET WKL VCF
Sbjct: 325 FGLNSIFALVSIVXFTXCASSNIVNSXXFPRLNGPTCSPSISRIRXSTRSETNWKLRVCF 146
Query: 166 PSP*TVNGSFXSA*ATX*LTTRPSSMHMRGPYVLKIRAIXT 44
PSP*TV GS A*AT LTTRPSS H+RGPYVLKIRAI T
Sbjct: 145 PSP*TVKGSLRKA*ATKLLTTRPSSRHIRGPYVLKIRAIRT 23
>gb|BF186163.1|BF186163 NXCI_133_G06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_133_G06 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 423
Score = 189 bits (407), Expect = 2e-047
Identities = 80/129 (62%), Positives = 95/129 (73%)
Frame = +3 / +3
Query: 45 VXIARIFNTYGPRMCIDDGRVVS*XVAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKL 224
+ IARIFNTYGPRM IDDGRVVS +AQAL EP+TV G QTRSF YVSD+V+GL++L
Sbjct: 36 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRL 215
Query: 225 MEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELL 404
MEG++ GP NLGNPGEFTMLELA V++ I+ + +E +NT D K KPDI LL
Sbjct: 216 MEGDNTGPINLGNPGEFTMLELAEAVKELIETSTTVEMVENTPDXXRKXKPDITXXTTLL 395
Query: 405 GWEPKIPLR 431
GWEP LR
Sbjct: 396 GWEPXXTLR 422
Score = 131 bits (281), Expect = 5e-030
Identities = 73/127 (57%), Positives = 80/127 (62%)
Frame = -1 / -3
Query: 430 RRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTTLASSSMVNSPGLPRL 251
R+ GSHPRS + MSG L SS VF S S+ S+T ASSS+VNSPG PR
Sbjct: 421 RKVXXGSHPRSVVXXVMSGXXLRXSSGVFSTISTVVDVSISSFTASASSSIVNSPGFPRF 242
Query: 250 NGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVNGSFXSA*ATX*LTTRPSSMHMRGPY 71
GP SPSIS I+PST SET KL VC P TV GS A*A LTTRPSSM +RGP
Sbjct: 241 IGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*AIKLLTTRPSSMFIRGP* 62
Query: 70 VLKIRAI 50
VL IRAI
Sbjct: 61 VLNIRAI 41
>gb|CX648143.1|CX648143 COLD1_26_G01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_26_G01_A029 5', mRNA sequence
Length = 786
Score = 188 bits (404), Expect = 6e-047
Identities = 79/128 (61%), Positives = 96/128 (75%)
Frame = +3 / +2
Query: 120 VAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXV 299
+AQAL E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA
Sbjct: 8 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 187
Query: 300 VQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFG 479
V++ I+P+A ++ +NT DDP RKPDI +AK LLGWEPK+ LREGLP M DFR R+
Sbjct: 188 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNV 367
Query: 480 DQDTAAAT 503
+ A AT
Sbjct: 368 PKK*AVAT 391
Score = 79.4 bits (167), Expect(2) = 1e-024
Identities = 41/66 (62%), Positives = 45/66 (68%)
Frame = -1 / -1
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 213 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 34
Query: 145 GSFXSA 128
S SA
Sbjct: 33 SSPLSA 16
Score = 54.2 bits (112), Expect(2) = 1e-024
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = -1 / -1
Query: 502 VAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
VA A + R RKS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 390 VATAHFFGTFNRRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 232
>gb|CX650015.1|CX650015 COLD1_43_A08.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_43_A08_A029 3', mRNA sequence
Length = 781
Score = 188 bits (404), Expect = 6e-047
Identities = 79/128 (61%), Positives = 96/128 (75%)
Frame = +3 / +1
Query: 120 VAQALXXEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXV 299
+AQAL E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEFTMLELA
Sbjct: 10 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 189
Query: 300 VQDTIDPNARIEFRQNTXDDPHKRKPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIFG 479
V++ I+P+A ++ +NT DDP RKPDI +AK LLGWEPK+ LREGLP M DFR R+
Sbjct: 190 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRLNV 369
Query: 480 DQDTAAAT 503
+ A AT
Sbjct: 370 PKK*AVAT 393
Score = 79.4 bits (167), Expect(2) = 1e-024
Identities = 41/66 (62%), Positives = 45/66 (68%)
Frame = -1 / -3
Query: 325 ALGSMVSWTTLASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSETYWKLLVCFPSP*TVN 146
A GSM S+T ASS++VNSPG PRL GP SPSIS IRPST SET KL V P TV+
Sbjct: 215 AEGSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVS 36
Query: 145 GSFXSA 128
S SA
Sbjct: 35 SSPLSA 18
Score = 54.2 bits (112), Expect(2) = 1e-024
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = -1 / -3
Query: 502 VAAAVSWSPKMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF 344
VA A + R RKS +RGRPSRR GSHPR A MSG + GSS VF
Sbjct: 392 VATAHFFGTFNRRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 234
>gb|AI813092.1|AI813092 20F12 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 509
Score = 187 bits (402), Expect = 1e-046
Identities = 74/95 (77%), Positives = 86/95 (90%)
Frame = +3 / +1
Query: 192 VSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAXVVQDTIDPNARIEFRQNTXDDPHKR 371
VSDLV+GL++LME HVGPFNLGNPGEFTMLELA VV++TID +ARIEF++NT DDPHKR
Sbjct: 1 VSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPHKR 180
Query: 372 KPDIGRAKELLGWEPKIPLREGLPLMVTDFRKRIF 476
KPDI +AK+LL WEP+I LREGLPLMV DFRKR+F
Sbjct: 181 KPDITKAKDLLKWEPRISLREGLPLMVEDFRKRVF 285
Score = 114 bits (244), Expect = 7e-025
Identities = 59/94 (62%), Positives = 67/94 (71%)
Frame = -1 / -1
Query: 475 KMRLRKSVTMRGRPSRRGIFGSHPRSSLARPMSGLRLCGSSWVF*RNSIRALGSMVSWTT 296
K RLRKS T+ G PS + I GSH R S A +SG L GSS VF NSI AL S+VS+TT
Sbjct: 284 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 105
Query: 295 LASSSMVNSPGLPRLNGPTCSPSISFIRPSTRSE 194
ASS++VNSPGLPRL GPT SIS I PST+SE
Sbjct: 104 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSE 3
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 442,271,588
Number of Sequences: 355925
Number of extensions: 6686086
Number of successful extensions: 56006
Number of sequences better than 1.0e-020: 143
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 11592293675
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)