TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950292.2.1
(1205 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR050755.1|DR050755 RTBOR1_25_B02.g1_A029 Roots plus add... 234 e-121
gb|CO365906.1|CO365906 RTK1_20_A05.b1_A029 Roots minus pota... 224 e-119
gb|DR686141.1|DR686141 EST1076219 Normalized pine embryo li... 224 e-112
gb|CO365983.1|CO365983 RTK1_20_A05.g1_A029 Roots minus pota... 234 e-105
gb|CF389503.1|CF389503 RTDR2_7_D08.g1_A021 Loblolly pine ro... 224 e-102
gb|DT630928.1|DT630928 EST1145859 Normalized pine embryo li... 224 7e-082
gb|DR050672.1|DR050672 RTBOR1_25_B02.b1_A029 Roots plus add... 234 1e-081
gb|DR080231.1|DR080231 RTFEPL1_21_F06.b1_A029 Roots plus ad... 234 1e-080
gb|DR681770.1|DR681770 EST1071845 Normalized pine embryo li... 224 6e-080
gb|DR686265.1|DR686265 EST1076343 Normalized pine embryo li... 224 1e-078
gb|DR080303.1|DR080303 RTFEPL1_21_F06.g1_A029 Roots plus ad... 224 3e-078
gb|DR385386.1|DR385386 RTHG1_8_G12.b1_A029 Roots plus added... 231 9e-070
gb|BQ701196.1|BQ701196 NXSI_023_F09_F NXSI (Nsf Xylem Side ... 224 5e-060
gb|BQ634952.1|BQ634952 NXRV075_B05_F NXRV (Nsf Xylem Root w... 222 4e-057
gb|BE662528.1|BE662528 ST87/ST87D04 Pine TriplEx shoot tip ... 128 9e-057
gb|DR163034.1|DR163034 RTFE1_24_D08.b1_A029 Roots minus iro... 202 4e-051
gb|BF186414.1|BF186414 NXCI_137_B04_F NXCI (Nsf Xylem Compr... 200 1e-050
gb|AW010437.1|AW010437 ST06G08 Pine TriplEx shoot tip libra... 165 1e-040
gb|CF389389.1|CF389389 RTDR2_7_D08.b1_A021 Loblolly pine ro... 147 1e-034
gb|DR161148.1|DR161148 RTFE1_10_D03.b1_A029 Roots minus iro... 122 7e-027
gb|CD021703.1|CD021703 NXNV_155_G08_F Nsf Xylem Normal wood... 119 5e-026
>gb|DR050755.1|DR050755 RTBOR1_25_B02.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_B02_A029 5', mRNA sequence
Length = 935
Score = 234 bits (505), Expect(2) = e-121
Identities = 92/114 (80%), Positives = 100/114 (87%)
Frame = +2 / +2
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAIS 676
NSHVVEQ VEWLYAFDVHCNSFFP FV LYV+QYF+SPLLVA GF P LLSNLLF+VA S
Sbjct: 440 NSHVVEQHVEWLYAFDVHCNSFFPLFVALYVIQYFVSPLLVAQGFVPVLLSNLLFMVAFS 619
Query: 677 YYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYFG* 838
YYHYLNFLGYDVLPFLD+TTFFLYPIG +IIL P ++L FNPTRY LS Y+G*
Sbjct: 620 YYHYLNFLGYDVLPFLDKTTFFLYPIGFIIILFPFLVLARFNPTRYVLSFYYG* 781
Score = 224 bits (483), Expect(2) = e-121
Identities = 87/115 (75%), Positives = 95/115 (82%)
Frame = +2 / +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRRI+KWQQ DIEYTFWQM+HLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI L
Sbjct: 98 YLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSFLLA 277
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSH 505
A SAYCAAY S +HA T+ SVV +HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 278 VAASAYCAAYDVSVAHAGFTVLSVVLVHFLLIGIFLATCCWFLTNNYLREETSSN 442
Score = 159 bits (342), Expect(2) = 1e-075
Identities = 71/105 (67%), Positives = 83/105 (79%)
Frame = -3 / -3
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +* FV+NQQ VAK IP NKK +TTE V AC L+ AAQ*AD A +++++ITT
Sbjct: 429 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKLQITT 250
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHL 178
NAGSSRAH FFVCL YLVC**TT G+VQR*+ICQ VYSIS+CCHL
Sbjct: 249 NAGSSRAH*FFVCLWYLVC**TTLGDVQR*SICQKVYSISICCHL 115
Score = 144 bits (310), Expect(2) = 1e-075
Identities = 69/107 (64%), Positives = 78/107 (72%)
Frame = -3 / -3
Query: 825 KLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSRLD 646
KLR Y VGL S +G R++ +PIG RKNVVLS+ G TS PRKFR* * E AT KS+ D
Sbjct: 768 KLRTYRVGLKRASTKNGKRIIIKPIG*RKNVVLSKKGNTS*PRKFR*W*YEKATIKSKFD 589
Query: 645 NKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
+K G PCATNRG+ KY T TN+GKNELQ TSNA*SHST CSTT
Sbjct: 588 SKTGTNPCATNRGETKY*IT*SATNSGKNELQCTSNA*SHSTCCSTT 448
Score = 116 bits (247), Expect(3) = 1e-042
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = -2 / -2
Query: 487 SQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNKC 308
S+V +C++P C Q ++Q+M K++ C SSM T I TVS*C ++K N KC
Sbjct: 424 SKVIVCQKPTACCQKDSNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKKTTNYYKC 245
Query: 307 RIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
II PL+LCLLV+ G+LI++F ++ HLPK VFNI LLPLDD+A+V +K
Sbjct: 244 WIIPCPLILCLLVVLGMLINHFGGRAKVKHLPKGVFNIHLLPLDDSAKVLRK 89
Score = 67.0 bits (140), Expect(2) = 3e-021
Identities = 42/113 (37%), Positives = 56/113 (49%)
Frame = -1 / -1
Query: 836 NRSTSLESILSD*TLLVS*VETG**RDQSDTGRMLFYLEMEEHHILESSGSDNKKLPPRR 657
+ S + E I+ *+ V +E ** Q G+ML Y HH LESSG+ + + P R
Sbjct: 779 SHSRNSEHIV*G*SEQVPRMERE***SQ*GRGKMLSYPRRVTHHSLESSGNGSMRRLP*R 600
Query: 656 VD*ITKLERSHARPIEATENTAPHIG*QTQERTSYNERQMHRATPRVAQQHGC 498
+ K ER + E +N H QT + S N QMH+A P VA QH C
Sbjct: 599 ANLTVKRERILVQLTEVRQNIESHRVQQTAGKMSCNVHQMHKAIPHVAPQHDC 441
Score = 66.6 bits (139), Expect(3) = 2e-027
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +1 / +1
Query: 136 SARGVFFFLPPPHRQVATKGY*IHILANGSSLYFTKSSLSAHQISQANKEPVGP**SCIC 315
SA+ +P + QVA GY*IH+LAN S L+ +S LS +Q+ QANKE VG *S IC
Sbjct: 73 SAQSPLSSVPSQNHQVAADGY*IHLLANASPLHVPQSGLSTYQVPQANKESVGTG*SSIC 252
Score = 59.3 bits (123), Expect(3) = 2e-027
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1 / +1
Query: 499 QPCC*ATRGVALCI*RSL*LVLSCVCHPICGAVFSVASIGRAWLLSSFVI*STLRGGNFL 678
Q CC AT G+ALCI* +L L+ VC +C ++F + S+ + S F + L G +
Sbjct: 442 QSCCGATCGMALCI*CTLQLIFPAVCCTLCDSIFCLTSVSCTRIRSRFTVKFALYGSLLI 621
Query: 679 LSLPEL 696
L LPEL
Sbjct: 622 LPLPEL 639
Score = 58.8 bits (122), Expect(2) = 3e-021
Identities = 26/46 (56%), Positives = 28/46 (60%)
Frame = -1 / -1
Query: 314 QMQDHHGPTGSLFACDIWCADRLLLVKYRDEPFAKMCIQYPFVAT* 177
QM DH PT SLFAC W D+ L + E FAK CIQYP AT*
Sbjct: 251 QMLDHPVPTDSLFACGTWYVDKPLWGTCKGEAFAKRCIQYPSAAT* 114
Score = 53.8 bits (111), Expect(3) = 1e-042
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = -2 / -2
Query: 694 VQVVIIRNCHHEE*IR*QSWKEAMRDQ*RRQKILHHI*DDKRRKERVTMNVKCIEPLHAL 515
VQV+++ +H+E I + E++ + R KIL+HI +K+R++ V M +KCI+P H L
Sbjct: 637 VQVMVV*EGYHKEQI*Q*NGNESLCN*QR*DKILNHIECNKQREK*VAMYIKCIKPFHML 458
Query: 514 LNNMAV 497
L+NM V
Sbjct: 457 LHNMTV 440
Score = 43.2 bits (88), Expect(3) = 1e-042
Identities = 12/36 (33%), Positives = 26/36 (72%)
Frame = -2 / -2
Query: 838 LTEVQA*KVSCRIKPY*YHKWRQDDDETNRIQEECC 731
L V+ +SCR++ Y +W++++++ NR++E+CC
Sbjct: 781 LAIVETQNISCRVEASKYQEWKENNNKANRVEEKCC 674
Score = 35.4 bits (71), Expect(3) = 2e-027
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1 / +1
Query: 349 ISLLCSIWRECLTCCSNNHFGCVSPFLVCWDSFGHTLLVPYKFLLER 489
ISLLC + +C C + F F V W+ FG+ LLV K L R
Sbjct: 286 ISLLCCL*CQCGACWIYSAFSGTCAFFVDWNLFGNMLLVFDKQLPSR 426
>gb|CO365906.1|CO365906 RTK1_20_A05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_20_A05_A029 3', mRNA sequence
Length = 841
Score = 224 bits (484), Expect(2) = e-119
Identities = 88/108 (81%), Positives = 95/108 (87%)
Frame = +2 / -3
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAIS 676
NSHVVEQ VEWLYAFDVHCNSFFP FV LYV+QYF+SPLLVA GF P LLSNLLF+VA S
Sbjct: 326 NSHVVEQHVEWLYAFDVHCNSFFPLFVALYVIQYFVSPLLVAQGFVPVLLSNLLFMVAFS 147
Query: 677 YYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFL 820
YYHYLNFLGYDVLPFLD+TTFFLYPIG +IIL P ++L FNPTRY L
Sbjct: 146 YYHYLNFLGYDVLPFLDKTTFFLYPIGFIIILFPFLVLARFNPTRYVL 3
Score = 224 bits (483), Expect(2) = e-119
Identities = 87/115 (75%), Positives = 95/115 (82%)
Frame = +2 / -3
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRRI+KWQQ DIEYTFWQM+HLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI L
Sbjct: 668 YLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSFLLA 489
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSH 505
A SAYCAAY S +HA T+ SVV +HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 488 VAASAYCAAYDVSVAHAGFTVLSVVLVHFLLIGIFLATCCWFLTNNYLREETSSN 324
Score = 159 bits (342), Expect(2) = 7e-075
Identities = 71/105 (67%), Positives = 83/105 (79%)
Frame = -3 / +1
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +* FV+NQQ VAK IP NKK +TTE V AC L+ AAQ*AD A +++++ITT
Sbjct: 337 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKLQITT 516
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHL 178
NAGSSRAH FFVCL YLVC**TT G+VQR*+ICQ VYSIS+CCHL
Sbjct: 517 NAGSSRAH*FFVCLWYLVC**TTLGDVQR*SICQKVYSISICCHL 651
Score = 142 bits (305), Expect(2) = 7e-075
Identities = 68/106 (64%), Positives = 77/106 (72%)
Frame = -3 / +1
Query: 822 LRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSRLDN 643
LR Y VGL S +G R++ +PIG RKNVVLS+ G TS PRKFR* * E AT KS+ D+
Sbjct: 1 LRTYRVGLKRASTKNGKRIIIKPIG*RKNVVLSKKGNTS*PRKFR*W*YEKATIKSKFDS 180
Query: 642 KAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
K G PCATNRG+ KY T TN+GKNELQ TSNA*SHST CSTT
Sbjct: 181 KTGTNPCATNRGETKY*IT*SATNSGKNELQCTSNA*SHSTCCSTT 318
Score = 116 bits (247), Expect(3) = 7e-046
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = -2 / +3
Query: 487 SQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNKC 308
S+V +C++P C Q ++Q+M K++ C SSM T I TVS*C ++K N KC
Sbjct: 342 SKVIVCQKPTACCQKDSNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKKTTNYYKC 521
Query: 307 RIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
II PL+LCLLV+ G+LI++F ++ HLPK VFNI LLPLDD+A+V +K
Sbjct: 522 WIIPCPLILCLLVVLGMLINHFGGRAKVKHLPKGVFNIHLLPLDDSAKVLRK 677
Score = 66.6 bits (139), Expect(3) = 2e-027
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +1 / -2
Query: 136 SARGVFFFLPPPHRQVATKGY*IHILANGSSLYFTKSSLSAHQISQANKEPVGP**SCIC 315
SA+ +P + QVA GY*IH+LAN S L+ +S LS +Q+ QANKE VG *S IC
Sbjct: 693 SAQSPLSSVPSQNHQVAADGY*IHLLANASPLHVPQSGLSTYQVPQANKESVGTG*SSIC 514
Score = 65.7 bits (137), Expect(3) = 7e-046
Identities = 33/82 (40%), Positives = 42/82 (51%)
Frame = -1 / +2
Query: 743 GRMLFYLEMEEHHILESSGSDNKKLPPRRVD*ITKLERSHARPIEATENTAPHIG*QTQE 564
G+ML Y HH LESSG+ + + P R + K ER + E +N H QT
Sbjct: 80 GKMLSYPRRVTHHSLESSGNGSMRRLP*RANLTVKRERILVQLTEVRQNIESHRVQQTAG 259
Query: 563 RTSYNERQMHRATPRVAQQHGC 498
+ S N QMH+A P VA QH C
Sbjct: 260 KMSCNVHQMHKAIPHVAPQHDC 325
Score = 59.3 bits (123), Expect(3) = 2e-027
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1 / -2
Query: 499 QPCC*ATRGVALCI*RSL*LVLSCVCHPICGAVFSVASIGRAWLLSSFVI*STLRGGNFL 678
Q CC AT G+ALCI* +L L+ VC +C ++F + S+ + S F + L G +
Sbjct: 324 QSCCGATCGMALCI*CTLQLIFPAVCCTLCDSIFCLTSVSCTRIRSRFTVKFALYGSLLI 145
Query: 679 LSLPEL 696
L LPEL
Sbjct: 144 LPLPEL 127
Score = 41.8 bits (85), Expect(3) = 7e-046
Identities = 10/28 (35%), Positives = 23/28 (82%)
Frame = -2 / +3
Query: 814 VSCRIKPY*YHKWRQDDDETNRIQEECC 731
+SCR++ Y +W++++++ NR++E+CC
Sbjct: 9 ISCRVEASKYQEWKENNNKANRVEEKCC 92
Score = 35.4 bits (71), Expect(3) = 2e-027
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1 / -2
Query: 349 ISLLCSIWRECLTCCSNNHFGCVSPFLVCWDSFGHTLLVPYKFLLER 489
ISLLC + +C C + F F V W+ FG+ LLV K L R
Sbjct: 480 ISLLCCL*CQCGACWIYSAFSGTCAFFVDWNLFGNMLLVFDKQLPSR 340
>gb|DR686141.1|DR686141 EST1076219 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABC78 3' end, mRNA sequence
Length = 714
Score = 224 bits (483), Expect(2) = e-112
Identities = 87/115 (75%), Positives = 95/115 (82%)
Frame = +2 / +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRRI+KWQQ DIEYTFWQM+HLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI L
Sbjct: 95 YLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSFLLA 274
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSH 505
A SAYCAAY S +HA T+ SVV +HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 275 VAASAYCAAYDVSVAHAGFTVLSVVLVHFLLIGIFLATCCWFLTNNYLREETSSN 439
Score = 201 bits (434), Expect(2) = e-112
Identities = 79/92 (85%), Positives = 84/92 (91%)
Frame = +2 / +2
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAIS 676
NSHVVEQ VEWLYAFDVHCNSFFP FV LYV+QYF+SPLLVA GF P LLSNLLF+VA S
Sbjct: 437 NSHVVEQHVEWLYAFDVHCNSFFPLFVALYVIQYFVSPLLVAQGFVPVLLSNLLFMVAFS 616
Query: 677 YYHYLNFLGYDVLPFLDRTTFFLYPIGLVIIL 772
YYHYLNFLGYDVLPFLD+TTFFLYPIG +IIL
Sbjct: 617 YYHYLNFLGYDVLPFLDKTTFFLYPIGFIIIL 712
Score = 159 bits (342), Expect(2) = 9e-071
Identities = 71/105 (67%), Positives = 83/105 (79%)
Frame = -3 / -1
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +* FV+NQQ VAK IP NKK +TTE V AC L+ AAQ*AD A +++++ITT
Sbjct: 426 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKLQITT 247
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHL 178
NAGSSRAH FFVCL YLVC**TT G+VQR*+ICQ VYSIS+CCHL
Sbjct: 246 NAGSSRAH*FFVCLWYLVC**TTLGDVQR*SICQKVYSISICCHL 112
Score = 128 bits (275), Expect(2) = 9e-071
Identities = 60/89 (67%), Positives = 68/89 (76%)
Frame = -3 / -1
Query: 771 RMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSRLDNKAGKKPCATNRGDRKYC 592
R++ +PIG RKNVVLS+ G TS PRKFR* * E AT KS+ D+K G PCATNRG+ KY
Sbjct: 711 RIIIKPIG*RKNVVLSKKGNTS*PRKFR*W*YEKATIKSKFDSKTGTNPCATNRGETKY* 532
Query: 591 TTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
T TN+GKNELQ TSNA*SHST CSTT
Sbjct: 531 IT*SATNSGKNELQCTSNA*SHSTCCSTT 445
Score = 116 bits (247), Expect(3) = 1e-040
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = -2 / -3
Query: 487 SQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNKC 308
S+V +C++P C Q ++Q+M K++ C SSM T I TVS*C ++K N KC
Sbjct: 421 SKVIVCQKPTACCQKDSNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKKTTNYYKC 242
Query: 307 RIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
II PL+LCLLV+ G+LI++F ++ HLPK VFNI LLPLDD+A+V +K
Sbjct: 241 WIIPCPLILCLLVVLGMLINHFGGRAKVKHLPKGVFNIHLLPLDDSAKVLRK 86
Score = 65.7 bits (137), Expect(3) = 3e-027
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +1 / +1
Query: 136 SARGVFFFLPPPHRQVATKGY*IHILANGSSLYFTKSSLSAHQISQANKEPVGP**SCIC 315
SA+ +P + QVA GY*IH+LAN S L+ +S LS +Q+ QANKE VG *S IC
Sbjct: 70 SAQPPLSSVPSQNHQVAADGY*IHLLANASPLHVPQSGLSTYQVPQANKESVGTG*SSIC 249
Score = 65.7 bits (137), Expect(3) = 1e-040
Identities = 33/82 (40%), Positives = 42/82 (51%)
Frame = -1 / -2
Query: 743 GRMLFYLEMEEHHILESSGSDNKKLPPRRVD*ITKLERSHARPIEATENTAPHIG*QTQE 564
G+ML Y HH LESSG+ + + P R + K ER + E +N H QT
Sbjct: 683 GKMLSYPRRVTHHSLESSGNGSMRRLP*RANLTVKRERILVQLTEVRQNIESHRVQQTAG 504
Query: 563 RTSYNERQMHRATPRVAQQHGC 498
+ S N QMH+A P VA QH C
Sbjct: 503 KMSCNVHQMHKAIPHVAPQHDC 438
Score = 59.3 bits (123), Expect(3) = 3e-027
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1 / +1
Query: 499 QPCC*ATRGVALCI*RSL*LVLSCVCHPICGAVFSVASIGRAWLLSSFVI*STLRGGNFL 678
Q CC AT G+ALCI* +L L+ VC +C ++F + S+ + S F + L G +
Sbjct: 439 QSCCGATCGMALCI*CTLQLIFPAVCCTLCDSIFCLTSVSCTRIRSRFTVKFALYGSLLI 618
Query: 679 LSLPEL 696
L LPEL
Sbjct: 619 LPLPEL 636
Score = 35.4 bits (71), Expect(3) = 3e-027
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1 / +1
Query: 349 ISLLCSIWRECLTCCSNNHFGCVSPFLVCWDSFGHTLLVPYKFLLER 489
ISLLC + +C C + F F V W+ FG+ LLV K L R
Sbjct: 283 ISLLCCL*CQCGACWIYSAFSGTCAFFVDWNLFGNMLLVFDKQLPSR 423
Score = 24.0 bits (46), Expect(3) = 1e-040
Identities = 5/14 (35%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 772 QDDDETNRIQEECC 731
+++++ NR++E+CC
Sbjct: 712 ENNNKANRVEEKCC 671
>gb|CO365983.1|CO365983 RTK1_20_A05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_20_A05_A029 5', mRNA sequence
Length = 839
Score = 234 bits (505), Expect(2) = e-105
Identities = 92/114 (80%), Positives = 100/114 (87%)
Frame = +2 / -1
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAIS 676
NSHVVEQ VEWLYAFDVHCNSFFP FV LYV+QYF+SPLLVA GF P LLSNLLF+VA S
Sbjct: 566 NSHVVEQHVEWLYAFDVHCNSFFPLFVALYVIQYFVSPLLVAQGFVPVLLSNLLFMVAFS 387
Query: 677 YYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYFG* 838
YYHYLNFLGYDVLPFLD+TTFFLYPIG +IIL P ++L FNPTRY LS Y+G*
Sbjct: 386 YYHYLNFLGYDVLPFLDKTTFFLYPIGFIIILFPFLVLARFNPTRYVLSFYYG* 225
Score = 169 bits (363), Expect(2) = e-105
Identities = 67/92 (72%), Positives = 73/92 (79%)
Frame = +2 / -1
Query: 230 CTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLVFATSAYCAAYGESASHAALTITS 409
CTSPKVVYQHTKYHKQTKNQWARDDPAFVVI L A SAYCAAY S +HA T+ S
Sbjct: 839 CTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSFLLAVAASAYCAAYDVSVAHAGFTVLS 660
Query: 410 VVFLHFLFAGIVLATLCWFLTNSYLREEPNSH 505
VV +HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 659 VVLVHFLLIGIFLATCCWFLTNNYLREETSSN 564
Score = 144 bits (310), Expect(2) = 7e-064
Identities = 69/107 (64%), Positives = 78/107 (72%)
Frame = -3 / +1
Query: 825 KLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSRLD 646
KLR Y VGL S +G R++ +PIG RKNVVLS+ G TS PRKFR* * E AT KS+ D
Sbjct: 238 KLRTYRVGLKRASTKNGKRIIIKPIG*RKNVVLSKKGNTS*PRKFR*W*YEKATIKSKFD 417
Query: 645 NKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
+K G PCATNRG+ KY T TN+GKNELQ TSNA*SHST CSTT
Sbjct: 418 SKTGTNPCATNRGETKY*IT*SATNSGKNELQCTSNA*SHSTCCSTT 558
Score = 120 bits (257), Expect(2) = 7e-064
Identities = 56/87 (64%), Positives = 66/87 (75%)
Frame = -3 / +1
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +* FV+NQQ VAK IP NKK +TTE V AC L+ AAQ*AD A +++++ITT
Sbjct: 577 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKLQITT 756
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEV 232
NAGSSRAH FFVCL YLVC**TT G+V
Sbjct: 757 NAGSSRAH*FFVCLWYLVC**TTLGDV 837
Score = 79.4 bits (167), Expect(3) = 6e-032
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = -2 / +3
Query: 487 SQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNKC 308
S+V +C++P C Q ++Q+M K++ C SSM T I TVS*C ++K N KC
Sbjct: 582 SKVIVCQKPTACCQKDSNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKKTTNYYKC 761
Query: 307 RIITGPLVLCLLVIFGVLIDYF 242
II PL+LCLLV+ G+LI++F
Sbjct: 762 WIIPCPLILCLLVVLGMLINHF 827
Score = 53.8 bits (111), Expect(3) = 6e-032
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = -2 / +3
Query: 694 VQVVIIRNCHHEE*IR*QSWKEAMRDQ*RRQKILHHI*DDKRRKERVTMNVKCIEPLHAL 515
VQV+++ +H+E I + E++ + R KIL+HI +K+R++ V M +KCI+P H L
Sbjct: 369 VQVMVV*EGYHKEQI*Q*NGNESLCN*QR*DKILNHIECNKQREK*VAMYIKCIKPFHML 548
Query: 514 LNNMAV 497
L+NM V
Sbjct: 549 LHNMTV 566
Score = 43.2 bits (88), Expect(3) = 6e-032
Identities = 12/36 (33%), Positives = 26/36 (72%)
Frame = -2 / +3
Query: 838 LTEVQA*KVSCRIKPY*YHKWRQDDDETNRIQEECC 731
L V+ +SCR++ Y +W++++++ NR++E+CC
Sbjct: 225 LAIVETQNISCRVEASKYQEWKENNNKANRVEEKCC 332
>gb|CF389503.1|CF389503 RTDR2_7_D08.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_7_D08_A021 5', mRNA
sequence
Length = 701
Score = 224 bits (483), Expect(2) = e-102
Identities = 87/115 (75%), Positives = 95/115 (82%)
Frame = +2 / +3
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRRI+KWQQ DIEYTFWQM+HLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI L
Sbjct: 129 YLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSFLLA 308
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSH 505
A SAYCAAY S +HA T+ SVV +HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 309 VAASAYCAAYDVSVAHAGFTVLSVVLVHFLLIGIFLATCCWFLTNNYLREETSSN 473
Score = 171 bits (367), Expect(2) = e-102
Identities = 67/77 (87%), Positives = 70/77 (90%)
Frame = +2 / +3
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAIS 676
NSHVVEQ VEWLYAFDVHCNSFFP FV LYV+QYF+SPLLVA GF P LLSNLLF+VA S
Sbjct: 471 NSHVVEQHVEWLYAFDVHCNSFFPLFVALYVIQYFVSPLLVAQGFVPVLLSNLLFMVAFS 650
Query: 677 YYHYLNFLGYDVLPFLD 727
YYHYLNFLGYDVLPFLD
Sbjct: 651 YYHYLNFLGYDVLPFLD 701
Score = 159 bits (342), Expect(2) = 5e-064
Identities = 71/105 (67%), Positives = 83/105 (79%)
Frame = -3 / -2
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +* FV+NQQ VAK IP NKK +TTE V AC L+ AAQ*AD A +++++ITT
Sbjct: 460 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKLQITT 281
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHL 178
NAGSSRAH FFVCL YLVC**TT G+VQR*+ICQ VYSIS+CCHL
Sbjct: 280 NAGSSRAH*FFVCLWYLVC**TTLGDVQR*SICQKVYSISICCHL 146
Score = 116 bits (247), Expect(2) = 9e-037
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = -2 / -1
Query: 487 SQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNKC 308
S+V +C++P C Q ++Q+M K++ C SSM T I TVS*C ++K N KC
Sbjct: 455 SKVIVCQKPTACCQKDSNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKKTTNYYKC 276
Query: 307 RIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
II PL+LCLLV+ G+LI++F ++ HLPK VFNI LLPLDD+A+V +K
Sbjct: 275 WIIPCPLILCLLVVLGMLINHFGGRAKVKHLPKGVFNIHLLPLDDSAKVLRK 120
Score = 106 bits (226), Expect(2) = 5e-064
Identities = 50/74 (67%), Positives = 55/74 (74%)
Frame = -3 / -2
Query: 726 SRNGRTSYPRKFR****EIATTKSRLDNKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ* 547
S+ G TS PRKFR* * E AT KS+ D+K G PCATNRG+ KY T TN+GKNELQ
Sbjct: 700 SKKGNTS*PRKFR*W*YEKATIKSKFDSKTGTNPCATNRGETKY*IT*SATNSGKNELQC 521
Query: 546 TSNA*SHSTRCSTT 505
TSNA*SHST CSTT
Sbjct: 520 TSNA*SHSTCCSTT 479
Score = 66.6 bits (139), Expect(3) = 2e-027
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +1 / +2
Query: 136 SARGVFFFLPPPHRQVATKGY*IHILANGSSLYFTKSSLSAHQISQANKEPVGP**SCIC 315
SA+ +P + QVA GY*IH+LAN S L+ +S LS +Q+ QANKE VG *S IC
Sbjct: 104 SAQSPLSSVPSQNHQVAADGY*IHLLANASPLHVPQSGLSTYQVPQANKESVGTG*SSIC 283
Score = 59.3 bits (123), Expect(3) = 2e-027
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1 / +2
Query: 499 QPCC*ATRGVALCI*RSL*LVLSCVCHPICGAVFSVASIGRAWLLSSFVI*STLRGGNFL 678
Q CC AT G+ALCI* +L L+ VC +C ++F + S+ + S F + L G +
Sbjct: 473 QSCCGATCGMALCI*CTLQLIFPAVCCTLCDSIFCLTSVSCTRIRSRFTVKFALYGSLLI 652
Query: 679 LSLPEL 696
L LPEL
Sbjct: 653 LPLPEL 670
Score = 58.8 bits (122), Expect(2) = 9e-037
Identities = 29/71 (40%), Positives = 37/71 (52%)
Frame = -1 / -3
Query: 710 HHILESSGSDNKKLPPRRVD*ITKLERSHARPIEATENTAPHIG*QTQERTSYNERQMHR 531
HH LESSG+ + + P R + K ER + E +N H QT + S N QMH+
Sbjct: 684 HHSLESSGNGSMRRLP*RANLTVKRERILVQLTEVRQNIESHRVQQTAGKMSCNVHQMHK 505
Query: 530 ATPRVAQQHGC 498
A P VA QH C
Sbjct: 504 AIPHVAPQHDC 472
Score = 35.4 bits (71), Expect(3) = 2e-027
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1 / +2
Query: 349 ISLLCSIWRECLTCCSNNHFGCVSPFLVCWDSFGHTLLVPYKFLLER 489
ISLLC + +C C + F F V W+ FG+ LLV K L R
Sbjct: 317 ISLLCCL*CQCGACWIYSAFSGTCAFFVDWNLFGNMLLVFDKQLPSR 457
>gb|DT630928.1|DT630928 EST1145859 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF250 3' end, mRNA sequence
Length = 803
Score = 224 bits (483), Expect(2) = 7e-082
Identities = 87/115 (75%), Positives = 95/115 (82%)
Frame = +2 / +1
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRRI+KWQQ DIEYTFWQM+HLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI L
Sbjct: 241 YLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSFLLA 420
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSH 505
A SAYCAAY S +HA T+ SVV +HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 421 VAASAYCAAYDVSVAHAGFTVLSVVLVHFLLIGIFLATCCWFLTNNYLREETSSN 585
Score = 159 bits (342), Expect(3) = 2e-058
Identities = 71/105 (67%), Positives = 83/105 (79%)
Frame = -3 / -1
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +* FV+NQQ VAK IP NKK +TTE V AC L+ AAQ*AD A +++++ITT
Sbjct: 572 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKLQITT 393
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHL 178
NAGSSRAH FFVCL YLVC**TT G+VQR*+ICQ VYSIS+CCHL
Sbjct: 392 NAGSSRAH*FFVCLWYLVC**TTLGDVQR*SICQKVYSISICCHL 258
Score = 116 bits (247), Expect(3) = 8e-036
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = -2 / -3
Query: 487 SQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNKC 308
S+V +C++P C Q ++Q+M K++ C SSM T I TVS*C ++K N KC
Sbjct: 567 SKVIVCQKPTACCQKDSNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKKTTNYYKC 388
Query: 307 RIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
II PL+LCLLV+ G+LI++F ++ HLPK VFNI LLPLDD+A+V +K
Sbjct: 387 WIIPCPLILCLLVVLGMLINHFGGRAKVKHLPKGVFNIHLLPLDDSAKVLRK 232
Score = 101 bits (215), Expect(2) = 7e-082
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +2 / +1
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFP 637
NSHVVEQ VEWLYAFDVHCNSFFP FV LYV+QYF+SPLLVA FP
Sbjct: 583 NSHVVEQHVEWLYAFDVHCNSFFPLFVALYVIQYFVSPLLVAQDSFP 723
Score = 70.7 bits (148), Expect(3) = 2e-058
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -3 / -1
Query: 636 GKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
G + CATNRG+ KY T TN+GKNELQ TSNA*SHST CSTT
Sbjct: 722 GNESCATNRGETKY*IT*SATNSGKNELQCTSNA*SHSTCCSTT 591
Score = 68.0 bits (142), Expect(4) = 2e-034
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = +2 / +3
Query: 563 FPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAISYYHYLNFLGYDVLP 718
FPA F + F P LLSNLLF+VA SYYHYLNFLGYDVLP
Sbjct: 648 FPAVCCTLCDSIFCLTSVSCTRFVPVLLSNLLFMVAFSYYHYLNFLGYDVLP 803
Score = 66.6 bits (139), Expect(4) = 2e-034
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +1 / +3
Query: 136 SARGVFFFLPPPHRQVATKGY*IHILANGSSLYFTKSSLSAHQISQANKEPVGP**SCIC 315
SA+ +P + QVA GY*IH+LAN S L+ +S LS +Q+ QANKE VG *S IC
Sbjct: 216 SAQSPLSSVPSQNHQVAADGY*IHLLANASPLHVPQSGLSTYQVPQANKESVGTG*SSIC 395
Score = 47.3 bits (97), Expect(3) = 8e-036
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = -2 / -3
Query: 610 RRQKILHHI*DDKRRKERVTMNVKCIEPLHALLNNMAV 497
R KIL+HI +K+R++ V M +KCI+P H LL+NM V
Sbjct: 696 R*DKILNHIECNKQREK*VAMYIKCIKPFHMLLHNMTV 583
Score = 35.9 bits (72), Expect(3) = 2e-058
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -3 / -2
Query: 717 GRTSYPRKFR****EIATTKSRLDNKAG 634
G TS PRKFR* * E AT KS+ D+K G
Sbjct: 802 GNTS*PRKFR*W*YEKATIKSKFDSKTG 719
Score = 35.4 bits (71), Expect(4) = 2e-034
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1 / +3
Query: 349 ISLLCSIWRECLTCCSNNHFGCVSPFLVCWDSFGHTLLVPYKFLLER 489
ISLLC + +C C + F F V W+ FG+ LLV K L R
Sbjct: 429 ISLLCCL*CQCGACWIYSAFSGTCAFFVDWNLFGNMLLVFDKQLPSR 569
Score = 32.7 bits (65), Expect(4) = 2e-034
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3 / +2
Query: 498 TAMLLSNAWSGSMHLTFIVT 557
T ML SN W+G MHL +I T
Sbjct: 584 TVMLWSNMWNGFMHLMYIAT 643
Score = 26.3 bits (51), Expect(3) = 8e-036
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1 / -3
Query: 710 HHILESSGSDNKKLPPRRVD*ITKLER 630
HH LESSG+ + + P R + K ER
Sbjct: 795 HHSLESSGNGSMRRLP*RANLTVKRER 715
>gb|DR050672.1|DR050672 RTBOR1_25_B02.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_B02_A029 3', mRNA sequence
Length = 886
Score = 234 bits (505), Expect(2) = 1e-081
Identities = 92/114 (80%), Positives = 100/114 (87%)
Frame = +2 / +2
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAIS 676
NSHVVEQ VEWLYAFDVHCNSFFP FV LYV+QYF+SPLLVA GF P LLSNLLF+VA S
Sbjct: 179 NSHVVEQHVEWLYAFDVHCNSFFPLFVALYVIQYFVSPLLVAQGFVPVLLSNLLFMVAFS 358
Query: 677 YYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYFG* 838
YYHYLNFLGYDVLPFLD+TTFFLYPIG +IIL P ++L FNPTRY LS Y+G*
Sbjct: 359 YYHYLNFLGYDVLPFLDKTTFFLYPIGFIIILFPFLVLARFNPTRYVLSFYYG* 520
Score = 144 bits (310), Expect(2) = 9e-047
Identities = 69/107 (64%), Positives = 78/107 (72%)
Frame = -3 / -2
Query: 825 KLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSRLD 646
KLR Y VGL S +G R++ +PIG RKNVVLS+ G TS PRKFR* * E AT KS+ D
Sbjct: 507 KLRTYRVGLKRASTKNGKRIIIKPIG*RKNVVLSKKGNTS*PRKFR*W*YEKATIKSKFD 328
Query: 645 NKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
+K G PCATNRG+ KY T TN+GKNELQ TSNA*SHST CSTT
Sbjct: 327 SKTGTNPCATNRGETKY*IT*SATNSGKNELQCTSNA*SHSTCCSTT 187
Score = 90.4 bits (191), Expect(2) = 1e-081
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +2 / +2
Query: 335 LVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSH 505
L A SAYCAAY S +HA T+ SVV +HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 11 LAVAASAYCAAYDVSVAHAGFTVLSVVLVHFLLIGIFLATCCWFLTNNYLREETSSN 181
Score = 63.4 bits (132), Expect(2) = 9e-047
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = -3 / -2
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRI 325
SS +* FV+NQQ VAK IP NKK +TTE V AC L+ AAQ*AD A ++++
Sbjct: 168 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKL 1
Score = 53.8 bits (111), Expect(3) = 7e-021
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = -2 / -1
Query: 694 VQVVIIRNCHHEE*IR*QSWKEAMRDQ*RRQKILHHI*DDKRRKERVTMNVKCIEPLHAL 515
VQV+++ +H+E I + E++ + R KIL+HI +K+R++ V M +KCI+P H L
Sbjct: 376 VQVMVV*EGYHKEQI*Q*NGNESLCN*QR*DKILNHIECNKQREK*VAMYIKCIKPFHML 197
Query: 514 LNNMAV 497
L+NM V
Sbjct: 196 LHNMTV 179
Score = 43.2 bits (88), Expect(3) = 7e-021
Identities = 12/36 (33%), Positives = 26/36 (72%)
Frame = -2 / -1
Query: 838 LTEVQA*KVSCRIKPY*YHKWRQDDDETNRIQEECC 731
L V+ +SCR++ Y +W++++++ NR++E+CC
Sbjct: 520 LAIVETQNISCRVEASKYQEWKENNNKANRVEEKCC 413
Score = 41.8 bits (85), Expect(3) = 7e-021
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = -2 / -1
Query: 487 SQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEK 329
S+V +C++P C Q ++Q+M K++ C SSM T I TVS*C ++K
Sbjct: 163 SKVIVCQKPTACCQKDSNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKK 5
>gb|DR080231.1|DR080231 RTFEPL1_21_F06.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_21_F06_A029 3', mRNA sequence
Length = 751
Score = 234 bits (505), Expect(2) = 1e-080
Identities = 92/114 (80%), Positives = 100/114 (87%)
Frame = +2 / +1
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAIS 676
NSHVVEQ VEWLYAFDVHCNSFFP FV LYV+QYF+SPLLVA GF P LLSNLLF+VA S
Sbjct: 154 NSHVVEQHVEWLYAFDVHCNSFFPLFVALYVIQYFVSPLLVAQGFVPVLLSNLLFMVAFS 333
Query: 677 YYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYFG* 838
YYHYLNFLGYDVLPFLD+TTFFLYPIG +IIL P ++L FNPTRY LS Y+G*
Sbjct: 334 YYHYLNFLGYDVLPFLDKTTFFLYPIGFIIILFPFLVLARFNPTRYVLSFYYG* 495
Score = 144 bits (310), Expect(2) = 3e-044
Identities = 69/107 (64%), Positives = 78/107 (72%)
Frame = -3 / -3
Query: 825 KLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSRLD 646
KLR Y VGL S +G R++ +PIG RKNVVLS+ G TS PRKFR* * E AT KS+ D
Sbjct: 482 KLRTYRVGLKRASTKNGKRIIIKPIG*RKNVVLSKKGNTS*PRKFR*W*YEKATIKSKFD 303
Query: 645 NKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
+K G PCATNRG+ KY T TN+GKNELQ TSNA*SHST CSTT
Sbjct: 302 SKTGTNPCATNRGETKY*IT*SATNSGKNELQCTSNA*SHSTCCSTT 162
Score = 87.2 bits (184), Expect(2) = 1e-080
Identities = 34/52 (65%), Positives = 40/52 (76%)
Frame = +2 / +1
Query: 350 SAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSH 505
SAYCAAY S +HA T+ SVV +HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 1 SAYCAAYDVSVAHAGFTVLSVVLVHFLLIGIFLATCCWFLTNNYLREETSSN 156
Score = 55.1 bits (114), Expect(2) = 3e-044
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = -3 / -3
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*A 352
SS +* FV+NQQ VAK IP NKK +TTE V AC L+ AAQ*A
Sbjct: 143 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*A 3
>gb|DR681770.1|DR681770 EST1071845 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA134 3' end, mRNA sequence
Length = 698
Score = 224 bits (483), Expect(2) = 6e-080
Identities = 87/115 (75%), Positives = 95/115 (82%)
Frame = +2 / +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRRI+KWQQ DIEYTFWQM+HLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI L
Sbjct: 233 YLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSFLLA 412
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSH 505
A SAYCAAY S +HA T+ SVV +HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 413 VAASAYCAAYDVSVAHAGFTVLSVVLVHFLLIGIFLATCCWFLTNNYLREETSSN 577
Score = 159 bits (342), Expect(2) = 1e-050
Identities = 71/105 (67%), Positives = 83/105 (79%)
Frame = -3 / -3
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +* FV+NQQ VAK IP NKK +TTE V AC L+ AAQ*AD A +++++ITT
Sbjct: 564 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKLQITT 385
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHL 178
NAGSSRAH FFVCL YLVC**TT G+VQR*+ICQ VYSIS+CCHL
Sbjct: 384 NAGSSRAH*FFVCLWYLVC**TTLGDVQR*SICQKVYSISICCHL 250
Score = 116 bits (247), Expect(2) = 2e-033
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = -2 / -2
Query: 487 SQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNKC 308
S+V +C++P C Q ++Q+M K++ C SSM T I TVS*C ++K N KC
Sbjct: 559 SKVIVCQKPTACCQKDSNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKKTTNYYKC 380
Query: 307 RIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
II PL+LCLLV+ G+LI++F ++ HLPK VFNI LLPLDD+A+V +K
Sbjct: 379 WIIPCPLILCLLVVLGMLINHFGGRAKVKHLPKGVFNIHLLPLDDSAKVLRK 224
Score = 95.0 bits (201), Expect(2) = 6e-080
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +2 / +2
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLV 619
NSHVVEQ VEWLYAFDVHCNSFFP FV LYV+QYF+SPLLV
Sbjct: 575 NSHVVEQHVEWLYAFDVHCNSFFPLFVALYVIQYFVSPLLV 697
Score = 66.6 bits (139), Expect(3) = 2e-023
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +1 / +1
Query: 136 SARGVFFFLPPPHRQVATKGY*IHILANGSSLYFTKSSLSAHQISQANKEPVGP**SCIC 315
SA+ +P + QVA GY*IH+LAN S L+ +S LS +Q+ QANKE VG *S IC
Sbjct: 208 SAQSPLSSVPSQNHQVAADGY*IHLLANASPLHVPQSGLSTYQVPQANKESVGTG*SSIC 387
Score = 62.0 bits (129), Expect(2) = 1e-050
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = -3 / -3
Query: 618 TNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
TNRG+ KY T TN+GKNELQ TSNA*SHST CSTT
Sbjct: 696 TNRGETKY*IT*SATNSGKNELQCTSNA*SHSTCCSTT 583
Score = 47.3 bits (97), Expect(2) = 2e-033
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = -2 / -2
Query: 610 RRQKILHHI*DDKRRKERVTMNVKCIEPLHALLNNMAV 497
R KIL+HI +K+R++ V M +KCI+P H LL+NM V
Sbjct: 688 R*DKILNHIECNKQREK*VAMYIKCIKPFHMLLHNMTV 575
Score = 45.5 bits (93), Expect(3) = 2e-023
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1 / +1
Query: 499 QPCC*ATRGVALCI*RSL*LVLSCVCHPICGAVFSVASI 615
Q CC AT G+ALCI* +L L+ VC +C ++F + S+
Sbjct: 577 QSCCGATCGMALCI*CTLQLIFPAVCCTLCDSIFCLTSV 693
Score = 35.4 bits (71), Expect(3) = 2e-023
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1 / +1
Query: 349 ISLLCSIWRECLTCCSNNHFGCVSPFLVCWDSFGHTLLVPYKFLLER 489
ISLLC + +C C + F F V W+ FG+ LLV K L R
Sbjct: 421 ISLLCCL*CQCGACWIYSAFSGTCAFFVDWNLFGNMLLVFDKQLPSR 561
>gb|DR686265.1|DR686265 EST1076343 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABE18 3' end, mRNA sequence
Length = 579
Score = 224 bits (483), Expect(2) = 1e-078
Identities = 87/115 (75%), Positives = 95/115 (82%)
Frame = +2 / +1
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRRI+KWQQ DIEYTFWQM+HLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI L
Sbjct: 118 YLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSFLLA 297
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSH 505
A SAYCAAY S +HA T+ SVV +HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 298 VAASAYCAAYDVSVAHAGFTVLSVVLVHFLLIGIFLATCCWFLTNNYLREETSSN 462
Score = 159 bits (342), Expect(2) = 5e-050
Identities = 71/105 (67%), Positives = 83/105 (79%)
Frame = -3 / -2
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +* FV+NQQ VAK IP NKK +TTE V AC L+ AAQ*AD A +++++ITT
Sbjct: 449 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKLQITT 270
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHL 178
NAGSSRAH FFVCL YLVC**TT G+VQR*+ICQ VYSIS+CCHL
Sbjct: 269 NAGSSRAH*FFVCLWYLVC**TTLGDVQR*SICQKVYSISICCHL 135
Score = 116 bits (247), Expect(2) = 8e-033
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = -2 / -1
Query: 487 SQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNKC 308
S+V +C++P C Q ++Q+M K++ C SSM T I TVS*C ++K N KC
Sbjct: 444 SKVIVCQKPTACCQKDSNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKKTTNYYKC 265
Query: 307 RIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
II PL+LCLLV+ G+LI++F ++ HLPK VFNI LLPLDD+A+V +K
Sbjct: 264 WIIPCPLILCLLVVLGMLINHFGGRAKVKHLPKGVFNIHLLPLDDSAKVLRK 109
Score = 90.9 bits (192), Expect(2) = 1e-078
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +2 / +1
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLL 616
NSHVVEQ VEWLYAFDVHC+SFFP FV LYV+QYF+SPLL
Sbjct: 460 NSHVVEQHVEWLYAFDVHCSSFFPLFVALYVIQYFVSPLL 579
Score = 66.6 bits (139), Expect(3) = 2e-023
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +1 / +3
Query: 136 SARGVFFFLPPPHRQVATKGY*IHILANGSSLYFTKSSLSAHQISQANKEPVGP**SCIC 315
SA+ +P + QVA GY*IH+LAN S L+ +S LS +Q+ QANKE VG *S IC
Sbjct: 93 SAQSPLSSVPSQNHQVAADGY*IHLLANASPLHVPQSGLSTYQVPQANKESVGTG*SSIC 272
Score = 59.7 bits (124), Expect(2) = 5e-050
Identities = 27/37 (72%), Positives = 29/37 (78%)
Frame = -3 / -2
Query: 615 NRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
NRG+ KY T TN+GKNELQ TSNA*SHST CSTT
Sbjct: 578 NRGETKY*IT*SATNSGKNELQCTSNA*SHSTCCSTT 468
Score = 45.5 bits (93), Expect(3) = 2e-023
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1 / +3
Query: 499 QPCC*ATRGVALCI*RSL*LVLSCVCHPICGAVFSVASI 615
Q CC AT G+ALCI* +L L+ VC +C ++F + S+
Sbjct: 462 QSCCGATCGMALCI*CTLQLIFPAVCCTLCDSIFCLTSV 578
Score = 45.5 bits (93), Expect(2) = 8e-033
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = -2 / -1
Query: 610 RRQKILHHI*DDKRRKERVTMNVKCIEPLHALLNNMAV 497
R KIL+HI +K+R++ M +KCI+P H LL+NM V
Sbjct: 573 R*DKILNHIECNKQREK*AAMYIKCIKPFHMLLHNMTV 460
Score = 35.4 bits (71), Expect(3) = 2e-023
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1 / +3
Query: 349 ISLLCSIWRECLTCCSNNHFGCVSPFLVCWDSFGHTLLVPYKFLLER 489
ISLLC + +C C + F F V W+ FG+ LLV K L R
Sbjct: 306 ISLLCCL*CQCGACWIYSAFSGTCAFFVDWNLFGNMLLVFDKQLPSR 446
>gb|DR080303.1|DR080303 RTFEPL1_21_F06.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_21_F06_A029 5', mRNA sequence
Length = 660
Score = 224 bits (483), Expect(2) = 3e-078
Identities = 87/115 (75%), Positives = 95/115 (82%)
Frame = +2 / +1
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRRI+KWQQ DIEYTFWQM+HLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI L
Sbjct: 205 YLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSFLLA 384
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSH 505
A SAYCAAY S +HA T+ SVV +HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 385 VAASAYCAAYDVSVAHAGFTVLSVVLVHFLLIGIFLATCCWFLTNNYLREETSSN 549
Score = 159 bits (342), Expect(2) = 1e-048
Identities = 71/105 (67%), Positives = 83/105 (79%)
Frame = -3 / -2
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +* FV+NQQ VAK IP NKK +TTE V AC L+ AAQ*AD A +++++ITT
Sbjct: 536 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKLQITT 357
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHL 178
NAGSSRAH FFVCL YLVC**TT G+VQR*+ICQ VYSIS+CCHL
Sbjct: 356 NAGSSRAH*FFVCLWYLVC**TTLGDVQR*SICQKVYSISICCHL 222
Score = 116 bits (247), Expect(2) = 2e-033
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = -2 / -1
Query: 487 SQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNKC 308
S+V +C++P C Q ++Q+M K++ C SSM T I TVS*C ++K N KC
Sbjct: 531 SKVIVCQKPTACCQKDSNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKKTTNYYKC 352
Query: 307 RIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
II PL+LCLLV+ G+LI++F ++ HLPK VFNI LLPLDD+A+V +K
Sbjct: 351 WIIPCPLILCLLVVLGMLINHFGGRAKVKHLPKGVFNIHLLPLDDSAKVLRK 196
Score = 89.5 bits (189), Expect(2) = 3e-078
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2 / +1
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSP 610
NSHVVEQ VEWLYAFDVHCNSFFP FV LYV+QYF+SP
Sbjct: 547 NSHVVEQHVEWLYAFDVHCNSFFPLFVALYVIQYFVSP 660
Score = 66.6 bits (139), Expect(3) = 2e-022
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +1 / +3
Query: 136 SARGVFFFLPPPHRQVATKGY*IHILANGSSLYFTKSSLSAHQISQANKEPVGP**SCIC 315
SA+ +P + QVA GY*IH+LAN S L+ +S LS +Q+ QANKE VG *S IC
Sbjct: 180 SAQSPLSSVPSQNHQVAADGY*IHLLANASPLHVPQSGLSTYQVPQANKESVGTG*SSIC 359
Score = 54.7 bits (113), Expect(2) = 1e-048
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3 / -2
Query: 609 GDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
G+ KY T TN+GKNELQ TSNA*SHST CSTT
Sbjct: 659 GETKY*IT*SATNSGKNELQCTSNA*SHSTCCSTT 555
Score = 47.3 bits (97), Expect(2) = 2e-033
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = -2 / -1
Query: 610 RRQKILHHI*DDKRRKERVTMNVKCIEPLHALLNNMAV 497
R KIL+HI +K+R++ V M +KCI+P H LL+NM V
Sbjct: 660 R*DKILNHIECNKQREK*VAMYIKCIKPFHMLLHNMTV 547
Score = 42.3 bits (86), Expect(3) = 2e-022
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1 / +3
Query: 499 QPCC*ATRGVALCI*RSL*LVLSCVCHPICGAVF 600
Q CC AT G+ALCI* +L L+ VC +C ++F
Sbjct: 549 QSCCGATCGMALCI*CTLQLIFPAVCCTLCDSIF 650
Score = 35.4 bits (71), Expect(3) = 2e-022
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1 / +3
Query: 349 ISLLCSIWRECLTCCSNNHFGCVSPFLVCWDSFGHTLLVPYKFLLER 489
ISLLC + +C C + F F V W+ FG+ LLV K L R
Sbjct: 393 ISLLCCL*CQCGACWIYSAFSGTCAFFVDWNLFGNMLLVFDKQLPSR 533
>gb|DR385386.1|DR385386 RTHG1_8_G12.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_G12_A029 3', mRNA sequence
Length = 788
Score = 231 bits (498), Expect(2) = 9e-070
Identities = 91/114 (79%), Positives = 99/114 (86%)
Frame = +2 / +1
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAIS 676
NSHVVEQ VEWLYA DVHCNSFFP FV LYV+QYF+SPLLVA GF P LLSNLLF+VA S
Sbjct: 88 NSHVVEQHVEWLYAXDVHCNSFFPLFVALYVIQYFVSPLLVAQGFVPVLLSNLLFMVAFS 267
Query: 677 YYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYFG* 838
YYHYLNFLGYDVLPFLD+TTFFLYPIG +IIL P ++L FNPTRY LS Y+G*
Sbjct: 268 YYHYLNFLGYDVLPFLDKTTFFLYPIGFIIILFPFLVLARFNPTRYVLSFYYG* 429
Score = 141 bits (303), Expect(2) = 2e-037
Identities = 68/107 (63%), Positives = 77/107 (71%)
Frame = -3 / -1
Query: 825 KLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSRLD 646
KLR Y VGL S +G R++ +PIG RKNVVLS+ G TS PRKFR* * E AT KS+ D
Sbjct: 416 KLRTYRVGLKRASTKNGKRIIIKPIG*RKNVVLSKKGNTS*PRKFR*W*YEKATIKSKFD 237
Query: 645 NKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
+K G PCATNRG+ KY T TN+GKNELQ TS A*SHST CSTT
Sbjct: 236 SKTGTNPCATNRGETKY*IT*SATNSGKNELQCTSXA*SHSTCCSTT 96
Score = 54.2 bits (112), Expect(2) = 9e-070
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +2 / +1
Query: 419 LHFLFAGIVLATLCWFLTNSYLREEPNSH 505
+HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 4 VHFLLIGIFLATCCWFLTNNYLREETSSN 90
Score = 35.4 bits (71), Expect(2) = 2e-037
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3 / -1
Query: 492 SSLK*EFVRNQQSVAKTIPANKK 424
SS +* FV+NQQ VAK IP NKK
Sbjct: 77 SSRR*LFVKNQQHVAKKIPINKK 9
>gb|BQ701196.1|BQ701196 NXSI_023_F09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_023_F09 5' similar to Arabidopsis thaliana
sequence At2g15250 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 493
Score = 224 bits (483), Expect(2) = 5e-060
Identities = 87/115 (75%), Positives = 95/115 (82%)
Frame = +2 / +1
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRRI+KWQQ DIEYTFWQM+HLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI L
Sbjct: 118 YLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSFLLA 297
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTNSYLREEPNSH 505
A SAYCAAY S +HA T+ SVV +HFL GI LAT CWFLTN+YLREE +S+
Sbjct: 298 VAASAYCAAYDVSVAHAGFTVLSVVLVHFLLIGIFLATCCWFLTNNYLREETSSN 462
Score = 159 bits (342), Expect = 3e-038
Identities = 71/105 (67%), Positives = 83/105 (79%)
Frame = -3 / -3
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +* FV+NQQ VAK IP NKK +TTE V AC L+ AAQ*AD A +++++ITT
Sbjct: 449 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKLQITT 270
Query: 312 NAGSSRAHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHL 178
NAGSSRAH FFVCL YLVC**TT G+VQR*+ICQ VYSIS+CCHL
Sbjct: 269 NAGSSRAH*FFVCLWYLVC**TTLGDVQR*SICQKVYSISICCHL 135
Score = 116 bits (247), Expect = 4e-025
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = -2 / -2
Query: 487 SQVRICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNKC 308
S+V +C++P C Q ++Q+M K++ C SSM T I TVS*C ++K N KC
Sbjct: 444 SKVIVCQKPTACCQKDSNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKKTTNYYKC 265
Query: 307 RIITGPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
II PL+LCLLV+ G+LI++F ++ HLPK VFNI LLPLDD+A+V +K
Sbjct: 264 WIIPCPLILCLLVVLGMLINHFGGRAKVKHLPKGVFNIHLLPLDDSAKVLRK 109
Score = 28.6 bits (56), Expect(2) = 5e-060
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 497 NSHVVEQRVEW 529
NSHVVEQ VEW
Sbjct: 460 NSHVVEQHVEW 492
>gb|BQ634952.1|BQ634952 NXRV075_B05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV075_B05 5' similar to Arabidopsis thaliana
sequence At2g15250 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 499
Score = 222 bits (479), Expect = 4e-057
Identities = 89/114 (78%), Positives = 97/114 (85%)
Frame = +2 / +2
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAIS 676
NSHVVEQ V LYAFDVHCNSFFP FV LYV+QYF+SPLLVA F P LLSNLLF+VA S
Sbjct: 8 NSHVVEQHVXXLYAFDVHCNSFFPLFVALYVIQYFVSPLLVAQXFVPVLLSNLLFMVAFS 187
Query: 677 YYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYFG* 838
YYHYLNFLGYDVLPFLD+TTFFLYPIG +IIL P ++L FNPTRY LS Y+G*
Sbjct: 188 YYHYLNFLGYDVLPFLDKTTFFLYPIGFIIILFPFLVLARFNPTRYVLSFYYG* 349
Score = 135 bits (289), Expect = 7e-031
Identities = 66/107 (61%), Positives = 76/107 (71%)
Frame = -3 / -2
Query: 825 KLRKYLVGLNPISIISGDRMMTRPIGYRKNVVLSRNGRTSYPRKFR****EIATTKSRLD 646
KLR Y VGL S +G R++ +PIG RKNVVLS+ G+TS PRKFR* * E AT KS+ D
Sbjct: 336 KLRTYRVGLKRASTKNGKRIIIKPIG*RKNVVLSKKGKTS*PRKFR*W*YEKATIKSKFD 157
Query: 645 NKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
+K G CATNRG+ KY T TN+GKNELQ TSNA*S T CSTT
Sbjct: 156 SKTGTXXCATNRGETKY*IT*SATNSGKNELQCTSNA*SXXTCCSTT 16
>gb|BE662528.1|BE662528 ST87/ST87D04 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST87/ST87D04, mRNA sequence
Length = 412
Score = 128 bits (274), Expect(2) = 9e-057
Identities = 51/66 (77%), Positives = 54/66 (81%)
Frame = +2 / +3
Query: 497 NSHVVEQRVEWLYAFDVHCNSFFPAFVILYVVQYFLSPLLVAHGFFPALLSNLLFVVAIS 676
NSHVVEQ VEWLYAFDVHCNSFFP FV L V+QYF+SPLLVA GF P LLSNLL + S
Sbjct: 213 NSHVVEQHVEWLYAFDVHCNSFFPLFVALXVIQYFVSPLLVAQGFVPVLLSNLLXMXXXS 392
Query: 677 YYHYLN 694
YYH LN
Sbjct: 393 YYHXLN 410
Score = 113 bits (241), Expect(2) = 9e-057
Identities = 46/71 (64%), Positives = 52/71 (73%)
Frame = +2 / +3
Query: 293 ARDDPAFVVILILFLVFATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLT 472
ARDDP FVVI L A SAYCAAYG S +HA T+ SVV +HFL GI LAT CWFLT
Sbjct: 3 ARDDPXFVVICSFLLAVAASAYCAAYGVSVAHAGFTVLSVVLVHFLLIGIFLATCCWFLT 182
Query: 473 NSYLREEPNSH 505
N+YLREE +S+
Sbjct: 183 NNYLREETSSN 215
Score = 87.2 bits (184), Expect(2) = 1e-035
Identities = 40/67 (59%), Positives = 49/67 (73%)
Frame = -3 / -1
Query: 492 SSLK*EFVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITT 313
SS +* FV+NQQ VAK IP NKK +TTE V AC L+P AAQ*AD A +++++ITT
Sbjct: 202 SSRR*LFVKNQQHVAKKIPINKKCTSTTESTVNPACATLTP*AAQ*ADAATAKRKLQITT 23
Query: 312 NAGSSRA 292
N GSSRA
Sbjct: 22 NXGSSRA 2
Score = 84.0 bits (177), Expect(2) = 1e-035
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = -3 / -1
Query: 675 EIATTKSRLDNKAGKKPCATNRGDRKYCTTYRMTNAGKNELQ*TSNA*SHSTRCSTT 505
E S+ D+K G PCATNRG+ KY T TN+GKNELQ TSNA*SHST CSTT
Sbjct: 391 EXXXIXSKFDSKTGTNPCATNRGETKY*ITXSATNSGKNELQCTSNA*SHSTCCSTT 221
>gb|DR163034.1|DR163034 RTFE1_24_D08.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_24_D08_A029 3', mRNA sequence
Length = 361
Score = 202 bits (436), Expect = 4e-051
Identities = 78/102 (76%), Positives = 83/102 (81%)
Frame = +2 / -3
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRRI+KWQQ DIEYTFWQM+HLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI L
Sbjct: 308 YLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSFLLA 129
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWF 466
A SAYCAAY S +HA T+ SVV +HFL GI LAT CWF
Sbjct: 128 VAASAYCAAYDVSVAHAGFTVLSVVLVHFLLIGIFLATCCWF 3
Score = 152 bits (326), Expect = 5e-036
Identities = 66/97 (68%), Positives = 77/97 (79%)
Frame = -3 / +1
Query: 468 RNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITTNAGSSRAH 289
+NQQ VAK IP NKK +TTE V AC L+ AAQ*AD A +++++ITTNAGSSRAH
Sbjct: 1 KNQQHVAKKIPINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKLQITTNAGSSRAH 180
Query: 288 WFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHL 178
FFVCL YLVC**TT G+VQR*+ICQ VYSIS+CCHL
Sbjct: 181 *FFVCLWYLVC**TTLGDVQR*SICQKVYSISICCHL 291
Score = 107 bits (228), Expect = 2e-022
Identities = 51/105 (48%), Positives = 69/105 (65%)
Frame = -2 / +3
Query: 466 EPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNKCRIITGPL 287
+P C Q ++Q+M K++ C SSM T I TVS*C ++K N KC II PL
Sbjct: 3 KPTACCQKDSNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKKTTNYYKCWIIPCPL 182
Query: 286 VLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
+LCLLV+ G+LI++F ++ HLPK VFNI LLPLDD+A+V +K
Sbjct: 183 ILCLLVVLGMLINHFGGRAKVKHLPKGVFNIHLLPLDDSAKVLRK 317
>gb|BF186414.1|BF186414 NXCI_137_B04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_137_B04 5' similar to Arabidopsis
thaliana sequence At2g15250 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 386
Score = 200 bits (432), Expect = 1e-050
Identities = 78/105 (74%), Positives = 83/105 (79%)
Frame = +2 / +2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRRI+KWQQ DIEYTFWQM+HLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI L
Sbjct: 59 YLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSFLLA 238
Query: 341 FATSAYCAAYGESASHAALTITSVVFLHFLFAGIVLATLCWFLTN 475
A SAYCAAY S +HA T+ SVV +HFL LAT CW LTN
Sbjct: 239 VAASAYCAAYDVSVAHAGFTVLSVVLVHFLLIXXFLATCCWXLTN 373
Score = 147 bits (315), Expect = 2e-034
Identities = 65/99 (65%), Positives = 76/99 (76%)
Frame = -3 / -3
Query: 474 FVRNQQSVAKTIPANKKWRNTTEVIVRAACEALSPYAAQ*ADVANTRKRIRITTNAGSSR 295
FV+ QQ VAK NKK +TTE V AC L+ AAQ*AD A +++++ITTNAGSSR
Sbjct: 372 FVKXQQHVAKKXXINKKCTSTTESTVNPACATLTS*AAQ*ADAATAKRKLQITTNAGSSR 193
Query: 294 AHWFFVCL*YLVC**TTFGEVQR*TICQNVYSISLCCHL 178
AH FFVCL YLVC**TT G+VQR*+ICQ VYSIS+CCHL
Sbjct: 192 AH*FFVCLWYLVC**TTLGDVQR*SICQKVYSISICCHL 76
Score = 112 bits (240), Expect = 4e-024
Identities = 52/108 (48%), Positives = 71/108 (65%)
Frame = -2 / -2
Query: 475 ICKEPAKCGQNYPSKQEMEKHNRSDC*SSM*GTLSICCTVS*CCKHEEKNQNNNKCRIIT 296
+C+ P C Q ++Q+M K++ C SSM T I TVS*C ++K N KC II
Sbjct: 373 VCQXPTACCQKXXNQQKMHKYH*KHCKSSMRHTDIIGSTVS*CRYSQKKTTNYYKCWIIP 194
Query: 295 GPLVLCLLVIFGVLIDYFW*STEMNHLPKCVFNIPLLPLDDAAEVKKK 152
PL+LCLLV+ G+LI++F ++ HLPK VFNI LLPLDD+A+V +K
Sbjct: 193 CPLILCLLVVLGMLINHFGGRAKVKHLPKGVFNIHLLPLDDSAKVLRK 50
>gb|AW010437.1|AW010437 ST06G08 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST06G08, mRNA sequence
Length = 719
Score = 165 bits (355), Expect(2) = 1e-040
Identities = 63/83 (75%), Positives = 67/83 (80%)
Frame = +2 / -2
Query: 161 YLRRIVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVILILFLV 340
YLRRI+KWQQ DIEYTFWQM+HLCTSPKVVYQHTKYHKQTKNQWARDDP FVVI L
Sbjct: 481 YLRRIIKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPTFVVICSFLLA 302
Query: 341 FATSAYCAAYGESASHAALTITS 409
A S YCAAY S +HA T+ S
Sbjct: 301 VAASTYCAAYDVSVAHAXFTVLS 233
Score = 119 bits (255), Expect = 3e-026
Identities = 51/77 (66%), Positives = 60/77 (77%)
Frame = -3 / +3
Query: 408 EVIVRAACEALSPYAAQ*ADVANTRKRIRITTNAGSSRAHWFFVCL*YLVC**TTFGEVQ 229
E V AC L+ AAQ* D A +++++ITTN GSSRAH FFVCL YLVC**TT G+VQ
Sbjct: 234 ESTVXXACATLTS*AAQ*VDAATAKRKLQITTNVGSSRAH*FFVCLWYLVC**TTLGDVQ 413
Query: 228 R*TICQNVYSISLCCHL 178
R*+ICQ VYSIS+CCHL
Sbjct: 414 R*SICQKVYSISICCHL 464
Score = 25.4 bits (49), Expect(2) = 1e-040
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2 / -1
Query: 524 EWLYAFDVHCNSFFPAF 574
EWL FDV FP F
Sbjct: 104 EWLMQFDVXXKXIFPPF 54
>gb|CF389389.1|CF389389 RTDR2_7_D08.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_7_D08_A021 3', mRNA
sequence
Length = 597
Score = 147 bits (316), Expect = 1e-034
Identities = 59/76 (77%), Positives = 65/76 (85%)
Frame = +2 / +1
Query: 611 LLVAHGFFPALLSNLLFVVAISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMIL 790
LLVA GF P LLSNLLF+VA SYYHYLNFLGYDVLPFLD+TTFFLYPIG +IIL P ++L
Sbjct: 1 LLVAQGFVPVLLSNLLFMVAFSYYHYLNFLGYDVLPFLDKTTFFLYPIGFIIILFPFLVL 180
Query: 791 IGFNPTRYFLSLYFG* 838
FNPTRY LS Y+G*
Sbjct: 181 ARFNPTRYVLSFYYG* 228
>gb|DR161148.1|DR161148 RTFE1_10_D03.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_D03_A029 3', mRNA sequence
Length = 701
Score = 122 bits (260), Expect = 7e-027
Identities = 47/61 (77%), Positives = 53/61 (86%)
Frame = +2 / +1
Query: 656 LFVVAISYYHYLNFLGYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYFG 835
LF+VA SYYHYLNFLGYDVLPFLD+TTFFLYPIG +IIL P ++L FNPTRY LS Y+G
Sbjct: 52 LFMVAFSYYHYLNFLGYDVLPFLDKTTFFLYPIGFIIILFPFLVLARFNPTRYVLSFYYG 231
Query: 836 * 838
*
Sbjct: 232 * 234
>gb|CD021703.1|CD021703 NXNV_155_G08_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_155_G08 5' similar to Arabidopsis thaliana
sequence At2g15250 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 155
Score = 119 bits (254), Expect = 5e-026
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +2 / +1
Query: 173 IVKWQQRDIEYTFWQMVHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVI 322
I+KWQQ DIEYTFWQM+HLCTSPKV YQHTKYHK TKNQWARDD AFVVI
Sbjct: 1 IIKWQQMDIEYTFWQMLHLCTSPKVXYQHTKYHKXTKNQWARDDXAFVVI 150
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 662,719,413
Number of Sequences: 355925
Number of extensions: 10055665
Number of successful extensions: 51684
Number of sequences better than 1.0e-020: 27
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 18639478560
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)