TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2950225.2.1
         (3330 letters)

Database: Pinus_nucl_with_EST.fasta 
           355,925 sequences; 217,277,237 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BD266974.1|  Compositions isolated from plant cells and ...   192   e-103
gb|CF399989.1|CF399989  RTWW1_2_C12.g1_A015 Well-watered lob...   138   9e-055
gb|DR081108.1|DR081108  RTFEPL1_27_A10.g1_A029 Roots plus ad...   138   2e-051
gb|CF667932.1|CF667932  RTCNT1_33_H11.b1_A029 Root control P...   137   3e-051
dbj|BD267330.1|  Compositions isolated from plant cells and ...   182   7e-049
gb|CF397914.1|CF397914  RTDS3_23_F01.g1_A022 Drought-stresse...   179   8e-044
gb|CO173085.1|CO173085  NDL1_33_H09.g1_A029 Needles control ...   135   4e-038
gb|DR015323.1|DR015323  STRS1_2_G01.g1_A034 Shoot tip pitch ...   112   7e-035
gb|CO198621.1|CO198621  GEO1_15_E06.b1_A029 Root gravitropis...    90   5e-034
gb|DN609482.1|DN609482  EST962532 Subtracted pine embryo lib...    86   2e-029
gb|BF060537.1|BF060537  NXCI_116_D05_F NXCI (Nsf Xylem Compr...   116   2e-028
gb|DT627668.1|DT627668  EST1156417 Subtracted pine embryo li...    62   3e-025
gb|DR693059.1|DR693059  EST1083147 Normalized pine embryo li...    98   1e-024
dbj|BD266968.1|  Compositions isolated from plant cells and ...    84   4e-024
>dbj|BD266974.1| Compositions isolated from plant cells and utilization of the same in
            modifying plant cell signal transduction
          Length = 1489

 Score =  192 bits (414), Expect(4) = e-103
 Identities = 82/143 (57%), Positives = 98/143 (68%)
 Frame = -2 / +1

                                                                        
Query: 1514 AISIEDTGVGIPLQAQDRVFTPFMQADSSTSRNYGGTGIGLSISKCLAELMGGQISFTSH 1335
            A S EDTG+GIPL AQ RVFTPFMQADSSTSR YGGTGIGLSIS+CL ELMGG+I F S 
Sbjct: 4    AASTEDTGIGIPLPAQHRVFTPFMQADSSTSRTYGGTGIGLSISRCLIELMGGEIRFISR 183

                                                                        
Query: 1334 PSVGSTFTFSATLKHSYKDISGDSSRSLTEALPTAFKGMKAILVDGRPVRSAVTRYHLKR 1155
            P +GSTF+F+A  K       GD        LPT FKGMKA+++DG PV S VT+YHL+R
Sbjct: 184  PGIGSTFSFTALFKVGQAGADGDGDLLRGARLPTHFKGMKALVLDGNPVCSLVTKYHLQR 363

                                   
Query: 1154 LGILLQVVNNMNAVVKAFPGQNG 1086
             GI +  + +    +    G +G
Sbjct: 364  FGIEVDSITSSKVALSMLNGMDG 432

 Score =  138 bits (297), Expect(4) = e-103
 Identities = 61/87 (70%), Positives = 68/87 (78%)
 Frame = -2 / +2

                                                                        
Query: 791  LRSLLVGKNILVVDDNKVNLRVAAAALKKYGANVSCVESGKDAISLLQPPHRFDACFMDV 612
            L ++L GK+ILVVDDN VN RVAA ALKKYGANV C +SGK AIS+L+ PH F+ACFMDV
Sbjct: 773  LSNVLSGKSILVVDDNIVNRRVAAGALKKYGANVICTDSGKSAISMLRQPHNFNACFMDV 952

                                       
Query: 611  QMPEMDGFEATGQIRQMELKANEERKN 531
            QMPEMDGFEAT QIR  EL   E   N
Sbjct: 953  QMPEMDGFEATRQIRAAELANMECTSN 1033

 Score = 90.0 bits (190), Expect(4) = e-103
 Identities = 33/48 (68%), Positives = 44/48 (91%)
 Frame = -2 / +2

                                                            
Query: 509  STTAEYHLPVLAMTADVIQATYEECIKSGMDGYVSKPFDEEQLYQAVS 366
            +T   +H+P+LAMTADVIQAT+EEC++ GMDGYVSKPF+EEQLY+A++
Sbjct: 1049 ATNNRWHVPILAMTADVIQATHEECLRCGMDGYVSKPFEEEQLYKALA 1192

 Score = 80.3 bits (169), Expect(4) = 3e-051
 Identities = 39/80 (48%), Positives = 45/80 (56%)
 Frame = +1 / -2

                                                                       
Query: 568 LICPVASNPSISGI*TSIKHASKRCGG*SRLIASLPLSTQLTLAPYFXXXXXXXXXXXXX 747
           LIC VASNPSISGI TS+KHA K CG  S  IA  PLS Q+TLAPYF             
Sbjct: 996 LICRVASNPSISGICTSMKHALKLCGCRSMDIADFPLSVQITLAPYFFSAPAATRRLTML 817

                               
Query: 748 XXXXNIFFPTSKLRRNDGRF 807
               ++ FP + L R +  F
Sbjct: 816 SSTTSMDFPDNTLLRGEEVF 757

 Score = 78.5 bits (165), Expect(4) = 3e-051
 Identities = 37/79 (46%), Positives = 47/79 (59%)
 Frame = +1 / -3

                                                                        
Query: 1144 SIPNLLR*YLVTALRTGLPSTKMAFIPLKAVGSASVKLLLESPEISLYECFSVAEKVNVL 1323
            S+PNL + Y VT   TGLPS   AF+PLK VGS + +    SP    +   + A K NVL
Sbjct: 374  SMPNLCKWYFVTREHTGLPSNTSAFMPLK*VGSLAPRSKSPSPSAPAWPTLNKAVKENVL 195

                               
Query: 1324 PTEGWLVKLICPPISSARH 1380
            P  G L+ LI PPI+S +H
Sbjct: 194  PIPGRLINLISPPINSIKH 138

 Score = 61.6 bits (128), Expect(4) = 3e-051
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = +1 / -2

                                                         
Query: 373  AWYSCSSSKGLDTYPSIPDFMHSS*VAWITSAVIARTGRWYSAVV 507
            A YSCSSSKG +TYPS+P   HSS VA ITSAVIA+ G  +  +V
Sbjct: 1185 ALYSCSSSKGFETYPSMPHRRHSSWVACITSAVIAKIGTCHLLLV 1051

 Score = 54.7 bits (113), Expect(4) = 3e-051
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = +1 / -3

                                        
Query: 1423 EVELSACINGVKTRSCACSGIPTPVSSI 1506
            +VELSACINGVKTR CA  GIP PVSS+
Sbjct: 95   DVELSACINGVKTRCCAGRGIPIPVSSV 12

 Score = 28.1 bits (55), Expect(4) = e-103
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2 / +2

                                               
Query: 947 LVTSEADKDKYGSIFDIVMCKPIRASTIASSIQQLL 840
           L   E  K K     + V+ KP+RAS +A  +Q  L
Sbjct: 611 LTAEETQKAKAAGFAETVILKPLRASMLAVCLQLAL 718
>gb|CF399989.1|CF399989 RTWW1_2_C12.g1_A015 Well-watered loblolly pine roots WW1 Pinus
           taeda cDNA clone RTWW1_2_C12_A015 5', mRNA sequence
          Length = 754

 Score =  138 bits (297), Expect(3) = 9e-055
 Identities = 61/87 (70%), Positives = 68/87 (78%)
 Frame = -2 / +2

                                                                       
Query: 791 LRSLLVGKNILVVDDNKVNLRVAAAALKKYGANVSCVESGKDAISLLQPPHRFDACFMDV 612
           L ++L GK+ILVVDDN VN RVAA ALKKYGANV C +SGK AIS+L+ PH F+ACFMDV
Sbjct: 185 LSNVLSGKSILVVDDNIVNRRVAAGALKKYGANVICTDSGKSAISMLRQPHNFNACFMDV 364

                                      
Query: 611 QMPEMDGFEATGQIRQMELKANEERKN 531
           QMPEMDGFEAT QIR  EL   E   N
Sbjct: 365 QMPEMDGFEATRQIRAAELANMECTSN 445

 Score = 88.1 bits (186), Expect(3) = 9e-055
 Identities = 32/43 (74%), Positives = 42/43 (97%)
 Frame = -2 / +2

                                                      
Query: 494 YHLPVLAMTADVIQATYEECIKSGMDGYVSKPFDEEQLYQAVS 366
           +H+P+LAMTADVIQAT+EEC++ GMDGYVSKPF+EEQLY+A++
Sbjct: 476 WHVPILAMTADVIQATHEECLRCGMDGYVSKPFEEEQLYKALA 604

 Score = 80.3 bits (169), Expect(2) = 2e-026
 Identities = 39/80 (48%), Positives = 45/80 (56%)
 Frame = +1 / -2

                                                                       
Query: 568 LICPVASNPSISGI*TSIKHASKRCGG*SRLIASLPLSTQLTLAPYFXXXXXXXXXXXXX 747
           LIC VASNPSISGI TS+KHA K CG  S  IA  PLS Q+TLAPYF             
Sbjct: 408 LICRVASNPSISGICTSMKHALKLCGCRSMDIADFPLSVQITLAPYFFSAPAATRRLTML 229

                               
Query: 748 XXXXNIFFPTSKLRRNDGRF 807
               ++ FP + L R +  F
Sbjct: 228 SSTTSMDFPDNTLLRGEEVF 169

 Score = 61.1 bits (127), Expect(2) = 2e-026
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = +1 / -2

                                                 
Query: 373 AWYSCSSSKGLDTYPSIPDFMHSS*VAWITSAVIARTG 486
           A YSCSSSKG +TYPS+P   HSS VA ITSAVIA+ G
Sbjct: 597 ALYSCSSSKGFETYPSMPHRRHSSWVACITSAVIAKIG 484

 Score = 28.1 bits (55), Expect(3) = 9e-055
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2 / +2

                                               
Query: 947 LVTSEADKDKYGSIFDIVMCKPIRASTIASSIQQLL 840
           L   E  K K     + V+ KP+RAS +A  +Q  L
Sbjct: 23  LTAEETQKAKAAGFAETVILKPLRASMLAVCLQLAL 130
>gb|DR081108.1|DR081108 RTFEPL1_27_A10.g1_A029 Roots plus added iron Pinus taeda cDNA clone
           RTFEPL1_27_A10_A029 5', mRNA sequence
          Length = 747

 Score =  138 bits (297), Expect(3) = 2e-051
 Identities = 61/87 (70%), Positives = 68/87 (78%)
 Frame = -2 / +1

                                                                       
Query: 791 LRSLLVGKNILVVDDNKVNLRVAAAALKKYGANVSCVESGKDAISLLQPPHRFDACFMDV 612
           L ++L GK+ILVVDDN VN RVAA ALKKYGANV C +SGK AIS+L+ PH F+ACFMDV
Sbjct: 352 LSNVLSGKSILVVDDNIVNRRVAAGALKKYGANVICTDSGKSAISMLRQPHNFNACFMDV 531

                                      
Query: 611 QMPEMDGFEATGQIRQMELKANEERKN 531
           QMPEMDGFEAT QIR  EL   E   N
Sbjct: 532 QMPEMDGFEATRQIRAAELANMECTSN 612

 Score = 80.3 bits (169), Expect(2) = 6e-023
 Identities = 39/80 (48%), Positives = 45/80 (56%)
 Frame = +1 / -2

                                                                       
Query: 568 LICPVASNPSISGI*TSIKHASKRCGG*SRLIASLPLSTQLTLAPYFXXXXXXXXXXXXX 747
           LIC VASNPSISGI TS+KHA K CG  S  IA  PLS Q+TLAPYF             
Sbjct: 575 LICRVASNPSISGICTSMKHALKLCGCRSMDIADFPLSVQITLAPYFFSAPAATRRLTML 396

                               
Query: 748 XXXXNIFFPTSKLRRNDGRF 807
               ++ FP + L R +  F
Sbjct: 395 SSTTSMDFPDNTLLRGEEVF 336

 Score = 77.1 bits (162), Expect(3) = 2e-051
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = -2 / +1

                                                   
Query: 509 STTAEYHLPVLAMTADVIQATYEECIKSGMDGYVSKPFDE 390
           +T   +H+P+LAMTADVIQAT+EEC++ GMDGYVSKPF+E
Sbjct: 628 ATNNRWHVPILAMTADVIQATHEECLRCGMDGYVSKPFEE 747

 Score = 49.6 bits (102), Expect(2) = 6e-023
 Identities = 23/39 (58%), Positives = 28/39 (71%)
 Frame = +1 / -2

                                                  
Query: 391 SSKGLDTYPSIPDFMHSS*VAWITSAVIARTGRWYSAVV 507
           SSKG +TYPS+P   HSS VA ITSAVIA+ G  +  +V
Sbjct: 746 SSKGFETYPSMPHRRHSSWVACITSAVIAKIGTCHLLLV 630

 Score = 28.1 bits (55), Expect(3) = 2e-051
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2 / +1

                                               
Query: 947 LVTSEADKDKYGSIFDIVMCKPIRASTIASSIQQLL 840
           L   E  K K     + V+ KP+RAS +A  +Q  L
Sbjct: 190 LTAEETQKAKAAGFAETVILKPLRASMLAVCLQLAL 297
>gb|CF667932.1|CF667932 RTCNT1_33_H11.b1_A029 Root control Pinus taeda cDNA clone
            RTCNT1_33_H11_A029 3', mRNA sequence
          Length = 682

 Score =  137 bits (293), Expect(3) = 3e-051
 Identities = 57/88 (64%), Positives = 67/88 (76%)
 Frame = -2 / -1

                                                                        
Query: 1547 SNQSDSDRVTLAISIEDTGVGIPLQAQDRVFTPFMQADSSTSRNYGGTGIGLSISKCLAE 1368
            S+   S  V L +SIEDTGVGIPL AQ+RVF PFMQADSSTSR YGGTGIGLSIS+ L E
Sbjct: 517  SSPETSQTVNLCVSIEDTGVGIPLNAQERVFVPFMQADSSTSRTYGGTGIGLSISRFLVE 338

                                        
Query: 1367 LMGGQISFTSHPSVGSTFTFSATLKHSY 1284
            LM G++ F S P++GSTF F+A  K  +
Sbjct: 337  LMNGRMDFVSKPAIGSTFVFTAVFKKGH 254

 Score = 74.8 bits (157), Expect(3) = 3e-051
 Identities = 26/49 (53%), Positives = 40/49 (81%)
 Frame = -2 / -1

                                                             
Query: 1250 TEALPTAFKGMKAILVDGRPVRSAVTRYHLKRLGILLQVVNNMNAVVKA 1104
            +EAL T FKGM+A+++DGRP+R++VT YHLKRLG+ ++ V N+ + + A
Sbjct: 217  SEALTTVFKGMRALVIDGRPIRASVTEYHLKRLGVQVETVTNLKSAIAA 71

 Score = 31.3 bits (62), Expect(3) = 3e-051
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -2 / -1

                                       
Query: 1682 VESTANGAFNTLSGFEAADRRNSWQYF 1602
            V++ ++ + NTLSG EA D R++W+ F
Sbjct: 652  VKNGSSSSCNTLSGCEAFDVRSNWENF 572
>dbj|BD267330.1| Compositions isolated from plant cells and utilization of the same in
            modifying plant cell signal transduction
          Length = 558

 Score =  182 bits (391), Expect(2) = 7e-049
 Identities = 76/111 (68%), Positives = 97/111 (87%)
 Frame = -2 / +2

                                                                        
Query: 2075 QKDYAQTAQMCGRALITLINDVLDRAKIEAGKLELEAVPFDLRSLMDDVVSLFSSKSREK 1896
            QKDYAQTAQ  G+ALITLIN+VLD+AKIE+G+LELE VPF +R+++D V+SLFS+K++ K
Sbjct: 26   QKDYAQTAQASGKALITLINEVLDQAKIESGRLELETVPFHIRTVLDSVLSLFSAKTQAK 205

                                                               
Query: 1895 CIELAVFVCDNVPKVVIGDPWRFRQILTNLVGNAVKFTERGHVFVRVCLAE 1743
             IELAVFV + VP++VIGDP RF+QI+TNLV N+VKFTE GH+FV V LA+
Sbjct: 206  GIELAVFVSERVPEIVIGDPGRFQQIITNLVSNSVKFTENGHIFVCVHLAQ 358

 Score =  120 bits (256), Expect(2) = 7e-028
 Identities = 65/116 (56%), Positives = 74/116 (63%)
 Frame = +1 / -1

                                                                        
Query: 1747 AKHTRTNT*PRSVNLTAFPTKFVSICRNLQGSPITTFGTLSHTNTASSMHFSRDFEENKE 1926
            A+ T+T   P SVNLT   T+ V IC N  GSP+T  GTLS TNTASSM  +    E ++
Sbjct: 354  AR*TQTKMCPFSVNLTELETRLVIIC*NRPGSPMTISGTLSDTNTASSMPLACVLAEKRD 175

                                                                    
Query: 1927 TTSSMRERRSKGTASSSNFPASIFARSRTSFISVINALPHI*AV*A*SFCVIVRSV 2094
             T S   R  KGT SSS  P SIFA SRTSFI+VI A P   AV*A*SFCV  +SV
Sbjct: 174  KTLSRTVRIWKGTVSSSRRPDSIFAWSRTSFINVIKAFPLACAV*A*SFCVASKSV 7

 Score = 35.0 bits (70), Expect(2) = 7e-049
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -2 / +2

                              
Query: 1655 NTLSGFEAADRRNSWQYF 1602
            NTLSG EAAD RN+W+ F
Sbjct: 440  NTLSGSEAADTRNNWESF 493

 Score = 26.3 bits (51), Expect(2) = 7e-028
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1 / -1

                           
Query: 1612 QLFRLSAASNPLKVL 1656
            QLF +SAAS PL+VL
Sbjct: 483  QLFLVSAASEPLRVL 439
>gb|CF397914.1|CF397914 RTDS3_23_F01.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
            taeda cDNA clone RTDS3_23_F01_A022 5', mRNA sequence
          Length = 406

 Score =  179 bits (386), Expect = 8e-044
 Identities = 76/134 (56%), Positives = 91/134 (67%)
 Frame = -2 / +1

                                                                        
Query: 1487 GIPLQAQDRVFTPFMQADSSTSRNYGGTGIGLSISKCLAELMGGQISFTSHPSVGSTFTF 1308
            GIPL AQ RVFTPFM ADSSTSR YGGTGIGLSIS+CL ELMGG+I F S P +GSTF+F
Sbjct: 1    GIPLPAQHRVFTPFMHADSSTSRTYGGTGIGLSISRCLIELMGGEIRFISRPGIGSTFSF 180

                                                                        
Query: 1307 SATLKHSYKDISGDSSRSLTEALPTAFKGMKAILVDGRPVRSAVTRYHLKRLGILLQVVN 1128
            +A  K       GD        LPT FKGMKA+++DG PVRS VT+YHL+R GI +  + 
Sbjct: 181  TALFKVGQAGADGDGDLLRGARLPTHFKGMKALVLDGNPVRSLVTKYHLQRFGIEVDSIT 360

                          
Query: 1127 NMNAVVKAFPGQNG 1086
            +    +    G +G
Sbjct: 361  SSKVALSMLNGMDG 402

 Score = 80.8 bits (170), Expect(2) = 9e-021
 Identities = 38/79 (48%), Positives = 48/79 (60%)
 Frame = +1 / -3

                                                                        
Query: 1144 SIPNLLR*YLVTALRTGLPSTKMAFIPLKAVGSASVKLLLESPEISLYECFSVAEKVNVL 1323
            S+PNL + Y VT  RTGLPS   AF+PLK VGS + +    SP    +   + A K NVL
Sbjct: 344  SMPNLCKWYFVTKERTGLPSNTSAFMPLK*VGSLAPRSKSPSPSAPAWPTLNKAVKENVL 165

                               
Query: 1324 PTEGWLVKLICPPISSARH 1380
            P  G L+ LI PPI+S +H
Sbjct: 164  PIPGRLINLISPPINSIKH 108

 Score = 41.8 bits (85), Expect(2) = 9e-021
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = +1 / -3

                                 
Query: 1423 EVELSACINGVKTRSCACSGI 1485
            +VELSACINGVKTR CA  GI
Sbjct: 65   DVELSACINGVKTRCCAGRGI 3
>gb|CO173085.1|CO173085 NDL1_33_H09.g1_A029 Needles control Pinus taeda cDNA clone
           NDL1_33_H09_A029 5', mRNA sequence
          Length = 771

 Score =  135 bits (290), Expect(3) = 4e-038
 Identities = 60/87 (68%), Positives = 67/87 (77%)
 Frame = -2 / +3

                                                                       
Query: 791 LRSLLVGKNILVVDDNKVNLRVAAAALKKYGANVSCVESGKDAISLLQPPHRFDACFMDV 612
           L ++L GK+ILVVDDN VN  VAA ALKKYGANV C +SGK AIS+L+ PH F+ACFMDV
Sbjct: 459 LSNVLSGKSILVVDDNIVNRPVAAGALKKYGANVICTDSGKSAISMLRQPHNFNACFMDV 638

                                      
Query: 611 QMPEMDGFEATGQIRQMELKANEERKN 531
           QMPEMDGFEAT QIR  EL   E   N
Sbjct: 639 QMPEMDGFEATRQIRAAELANMECTSN 719

 Score = 43.2 bits (88), Expect(3) = 4e-038
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -2 / +3

                                                   
Query: 1202 DGRPVRSAVTRYHLKRLGILLQVVNNMNAVVKAFPGQNG 1086
            DG PVRS VT+YHL+R GI +  + +    +    G +G
Sbjct: 3    DGNPVRSLVTKYHLQRFGIQVDSITSSKVALSMLNGMDG 119

 Score = 28.1 bits (55), Expect(3) = 4e-038
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2 / +3

                                               
Query: 947 LVTSEADKDKYGSIFDIVMCKPIRASTIASSIQQLL 840
           L   E  K K     + V+ KP+RAS +A  +Q  L
Sbjct: 297 LTAEETQKAKAAGFAETVILKPLRASMLAVCLQLAL 404
>gb|DR015323.1|DR015323 STRS1_2_G01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
            cDNA clone STRS1_2_G01_A034 5', mRNA sequence
          Length = 884

 Score =  112 bits (239), Expect(2) = 7e-035
 Identities = 57/166 (34%), Positives = 89/166 (53%)
 Frame = -2 / +3

                                                                        
Query: 2246 DKVTEDCRKMEELKTQAEAADVAKSQFLATASHEIRTPMNGVXXXXXXXXXXXXXXTQKD 2067
            D + E    +E  + +AE A  A++ FLA  +HE+RTPM+ +               Q+ 
Sbjct: 36   DLLMEQNVALEIARQEAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRS 215

                                                                        
Query: 2066 YAQTAQMCGRALITLINDVLDRAKIEAGKLELEAVPFDLRSLMDDVVSLFSSKSREKCIE 1887
              +T       L TLINDVLD +K+E G LEL    F+LRS+  +V +L    +  K + 
Sbjct: 216  MVETILRSSNLLATLINDVLDLSKLEDGSLELNIRIFNLRSMFHEVHNLVKPIASVKKLC 395

                                                          
Query: 1886 LAVFVCDNVPKVVIGDPWRFRQILTNLVGNAVKFTERGHVFVRVCL 1749
            +++ +  ++P+   GD  R  Q + N++GNAVKF++ G V V V L
Sbjct: 396  VSMNLVSDLPEYAAGDDKRLMQTVLNVLGNAVKFSKEGSVSVTVLL 533

 Score = 62.5 bits (130), Expect(2) = 7e-035
 Identities = 25/56 (44%), Positives = 37/56 (66%)
 Frame = -2 / +3

                                                                    
Query: 1517 LAISIEDTGVGIPLQAQDRVFTPFMQADSSTSRNYGGTGIGLSISKCLAELMGGQI 1350
            L + ++DTG GI      ++F+ F+ +D+ T+RNYGGTG+GL+I K    LM G I
Sbjct: 603  LRVQVKDTGAGINPPDIPKLFSKFVHSDTMTTRNYGGTGLGLAICKRFVNLMEGHI 770
>gb|CO198621.1|CO198621 GEO1_15_E06.b1_A029 Root gravitropism April 2003 test Pinus taeda
           cDNA clone GEO1_15_E06_A029 3', mRNA sequence
          Length = 724

 Score = 90.0 bits (190), Expect(2) = 5e-034
 Identities = 34/45 (75%), Positives = 43/45 (95%)
 Frame = -2 / -1

                                                        
Query: 500 AEYHLPVLAMTADVIQATYEECIKSGMDGYVSKPFDEEQLYQAVS 366
           +++H+P+LAMTADVIQAT+EEC K GMDGYVSKPF+EEQLY+AV+
Sbjct: 568 SKWHVPILAMTADVIQATHEECSKCGMDGYVSKPFEEEQLYRAVA 434

 Score = 77.1 bits (162), Expect(2) = 5e-034
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = -2 / -1

                                                 
Query: 653 LQPPHRFDACFMDVQMPEMDGFEATGQIRQMELKANEE 540
           L+PPH+FDACFMDVQMPEMDGFEAT Q+R +E   NE+
Sbjct: 724 LKPPHKFDACFMDVQMPEMDGFEATRQVRDLERTVNEQ 611
>gb|DN609482.1|DN609482 EST962532 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
            clone PSAAD40, mRNA sequence
          Length = 865

 Score = 86.3 bits (182), Expect(3) = 2e-029
 Identities = 44/130 (33%), Positives = 68/130 (52%)
 Frame = -2 / +1

                                                                        
Query: 2138 TPMNGVXXXXXXXXXXXXXXTQKDYAQTAQMCGRALITLINDVLDRAKIEAGKLELEAVP 1959
            TPM+ +               Q+   +T       L TLINDVLD +K+E G LEL    
Sbjct: 1    TPMHAIIALSSLLQETELIPEQRSMVETILRSSDLLATLINDVLDLSKLEDGSLELNIRI 180

                                                                        
Query: 1958 FDLRSLMDDVVSLFSSKSREKCIELAVFVCDNVPKVVIGDPWRFRQILTNLVGNAVKFTE 1779
            F+LRS+  +V +L    +  K + +++ +  ++P+   GD  R  Q + N++GNAVKF++
Sbjct: 181  FNLRSMFHEVHNLVKPIASVKKLCVSMNLASDLPEYAAGDDKRLMQTVLNVLGNAVKFSK 360

                      
Query: 1778 RGHVFVRVCL 1749
             G V V V L
Sbjct: 361  EGSVSVTVLL 390

 Score = 62.5 bits (130), Expect(3) = 2e-029
 Identities = 25/56 (44%), Positives = 37/56 (66%)
 Frame = -2 / +1

                                                                    
Query: 1517 LAISIEDTGVGIPLQAQDRVFTPFMQADSSTSRNYGGTGIGLSISKCLAELMGGQI 1350
            L + ++DTG GI      ++F+ F+ +D+ T+RNYGGTG+GL+I K    LM G I
Sbjct: 460  LRVQVKDTGAGINPPDIPKLFSKFVHSDTMTTRNYGGTGLGLAICKRFVNLMEGHI 627

 Score = 29.5 bits (58), Expect(3) = 2e-029
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2 / +1

                                               
Query: 1229 FKGMKAILVDGRPVRSAVTRYHLKRLGILLQVVNN 1125
            F G+K ++ D   V   VTR  L RLG  + VV++
Sbjct: 760  FPGLKVLVTDDNGVNRMVTRSLLARLGCDVTVVDS 864
>gb|BF060537.1|BF060537 NXCI_116_D05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
           taeda cDNA clone NXCI_116_D05 5' similar to Arabidopsis
           thaliana sequence At2g01830 cytokinin receptor CRE1b
           (CRE1) see http://mips.gsf.de/proj/thal/db/index.html,
           mRNA sequence
          Length = 459

 Score =  116 bits (247), Expect(2) = 2e-028
 Identities = 47/63 (74%), Positives = 53/63 (84%)
 Frame = -2 / +3

                                                                       
Query: 800 PSFLRSLLVGKNILVVDDNKVNLRVAAAALKKYGANVSCVESGKDAISLLQPPHRFDACF 621
           P FL+SLL GK ILVVDDN+VN RV   ALKKYGANV C ESGK+AI++LQ PH+FDACF
Sbjct: 270 PPFLQSLLFGKKILVVDDNRVNRRVXXXALKKYGANVECAESGKNAIAMLQLPHKFDACF 449

              
Query: 620 MDV 612
           MDV
Sbjct: 450 MDV 458

 Score = 32.7 bits (65), Expect(2) = 2e-028
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -2 / +3

                                               
Query: 947 LVTSEADKDKYGSIFDIVMCKPIRASTIASSIQQLL 840
           + + E++K K     + V+ KP+RAS +A+ +QQ L
Sbjct: 117 ITSLESEKAKAAGFVETVIMKPLRASMVAACLQQEL 224
>gb|DT627668.1|DT627668 EST1156417 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
            clone PIMCP29 5' end, mRNA sequence
          Length = 935

 Score = 62.5 bits (130), Expect(5) = 3e-025
 Identities = 25/56 (44%), Positives = 37/56 (66%)
 Frame = -2 / -1

                                                                    
Query: 1517 LAISIEDTGVGIPLQAQDRVFTPFMQADSSTSRNYGGTGIGLSISKCLAELMGGQI 1350
            L + ++DTG GI      ++F+ F+ +D+ T+RNYGGTG+GL+I K    LM G I
Sbjct: 659  LRVQVKDTGAGINPPDIPKLFSKFVHSDTMTTRNYGGTGLGLAICKRFVNLMEGHI 492

 Score = 40.9 bits (83), Expect(5) = 3e-025
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = -2 / -1

                                                      
Query: 1874 VCDNVPKVVIGDPWRFRQILTNLVGNAVKFTERGHVFVRVCL 1749
            +  ++P+   GD  R  Q + N++GNAVKF++ G V V V L
Sbjct: 854  LASDLPEYAAGDDKRLMQTVLNVLGNAVKFSKEGSVSVTVLL 729

 Score = 38.2 bits (77), Expect(5) = 3e-025
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -2 / -1

                                             
Query: 482 VLAMTADVIQATYEECIKSGMDGYVSKPFDEEQL 381
           ++A+T    +AT E+CIK GMDG + KP   E++
Sbjct: 110 LVALTGSADKATKEKCIKIGMDGVLLKPVSLEKM 9

 Score = 31.3 bits (62), Expect(5) = 3e-025
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2 / -1

                                            
Query: 659 SLLQPPHRFDACFMDVQMPEMDGFEATGQIRQM 561
           ++ Q    F   F+DV MP MDG++    I++M
Sbjct: 236 AMSQAGQNFKVLFLDVCMPGMDGYDVAIHIQEM 138

 Score = 30.4 bits (60), Expect(5) = 3e-025
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2 / -1

                                                      
Query: 1229 FKGMKAILVDGRPVRSAVTRYHLKRLGILLQVVNNMNAVVKA 1104
            F G+K ++ D   V   VTR  L RLG  + VV++ +  ++A
Sbjct: 359  FPGLKVLVTDDNGVNRMVTRSLLARLGCDVTVVDSGHECLQA 234
>gb|DR693059.1|DR693059 EST1083147 Normalized pine embryo library, Lib_D Pinus taeda cDNA
            clone PWADT84 3' end, mRNA sequence
          Length = 657

 Score = 97.7 bits (207), Expect(2) = 1e-024
 Identities = 39/100 (39%), Positives = 60/100 (60%)
 Frame = -2 / +3

                                                                        
Query: 3242 YRAARTKRWWRGLAAAGWVLTAVVCSAVMHWTLRRDSMDRAEERLVSMCEERARMLQEQF 3063
            + + R    W  +A   W+L     +    +++ R++  R +E L +MC+ERARMLQ+QF
Sbjct: 306  FLSERVGERWNTMAVIVWILLGSSVAIYSFYSMTRETSRRRQETLANMCDERARMLQDQF 485

                                                    
Query: 3062 GVTVNHVHAIAILISTFNFEKSPPAIDQDTFAKYTARTSF 2943
              ++NHV A+ +L+ST + E  P A+ QD FA YTAR  F
Sbjct: 486  VASMNHVQALTVLVSTLHLEMKPSALYQDVFAAYTARDFF 605

 Score = 37.7 bits (76), Expect(2) = 1e-024
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = -2 / +1

                               
Query: 2951 TSFERPLLNGVAFAQRVFH 2895
            TSFERPL++GVA+A RV H
Sbjct: 598  TSFERPLMSGVAYAPRVLH 654
>dbj|BD266968.1| Compositions isolated from plant cells and utilization of the same in
            modifying plant cell signal transduction
          Length = 3567

 Score = 84.5 bits (178), Expect(4) = 4e-024
 Identities = 36/99 (36%), Positives = 61/99 (61%)
 Frame = -2 / +1

                                                                        
Query: 2033 LITLINDVLDRAKIEAGKLELEAVPFDLRSLMDDVVSLFSSKSREKCIELAVFVCDNVPK 1854
            L TLIND++D +++E   L L+  PF L  ++ D   L  + SR K + L V + D +P 
Sbjct: 2122 LSTLINDIMDFSELEDTSLVLQLHPFQLHGMLKDAAHLTETMSRSKGLLLNVEIGDGMPD 2301

                                                   
Query: 1853 VVIGDPWRFRQILTNLVGNAVKFTERGHVFVRVCLAENS 1737
             VIGD  R  +I+ ++VGNA+  T++G + +R+C+ + +
Sbjct: 2302 HVIGDEKRILRIILHMVGNAINSTKQGTISIRICVEDRA 2418

 Score = 39.1 bits (79), Expect(4) = 4e-024
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = -2 / +1

                                                           
Query: 482  VLAMTADVIQATYEECIKSGMDGYVSKPFDEEQLYQAVSRLVVGTTD 342
            V+A+TA   + T E C+++GMDG + KP    ++   + ++V  T +
Sbjct: 3016 VVALTASTDKETMERCLQTGMDGVIRKPVTLREMSNELFKIVHQTNN 3156

 Score = 32.7 bits (65), Expect(4) = 4e-024
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2 / +1

                                             
Query: 662  ISLLQPPHRFDACFMDVQMPEMDGFEATGQIRQ 564
            ++LLQ    F   F++V + +MDG+E   +IRQ
Sbjct: 2890 MTLLQSGSAFQLVFLEVCLAQMDGYEVAFRIRQ 2988

 Score = 29.9 bits (59), Expect(4) = 4e-024
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -2 / +1

                                         
Query: 1235 TAFKGMKAILVDGRPVRSAVTRYHLKRLG 1149
            ++FKG+K ++ D   V  +VTR  L+ LG
Sbjct: 2764 SSFKGLKVLVADDNNVSRSVTRRLLQELG 2850
  Database: Pinus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:45 PM
  Number of letters in database: 217,277,237
  Number of sequences in database:  355,925
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 1,823,314,971
Number of Sequences: 355925
Number of extensions: 28222823
Number of successful extensions: 110069
Number of sequences better than 1.0e-020: 17
length of database: 72,425,745
effective HSP length: 56
effective length of database: 52,493,945
effective search space used: 55276124085
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)