TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950089.2.2
(1044 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX253213.1|BX253213 BX253213 Pinus pinaster differenciat... 193 3e-049
gb|DR682838.1|DR682838 EST1072913 Normalized pine embryo li... 191 1e-048
gb|DR014767.1|DR014767 HEAT1_51_B06.g1_A029 Root at 37 C fo... 191 1e-048
gb|DR017755.1|DR017755 STRS1_18_G04.b1_A034 Shoot tip pitch... 191 1e-048
gb|DR688845.1|DR688845 EST1078931 Normalized pine embryo li... 191 1e-048
gb|DR683008.1|DR683008 EST1073083 Normalized pine embryo li... 191 1e-048
gb|DR012508.1|DR012508 HEAT1_13_G02.b1_A029 Root at 37 C fo... 191 1e-048
gb|DR385882.1|DR385882 RTHG1_11_A07.g1_A029 Roots plus adde... 191 1e-048
gb|CV035712.1|CV035712 RTNACL1_42_A06.b1_A029 Roots plus ad... 191 1e-048
gb|DT631560.1|DT631560 EST1146491 Normalized pine embryo li... 191 1e-048
gb|CO160201.1|CO160201 FLD1_19_A03.g1_A029 Root flooded Pin... 191 1e-048
gb|CF672623.1|CF672623 RTCNT1_64_H05.g1_A029 Root control P... 191 1e-048
gb|DR091888.1|DR091888 RTAL1_24_D06.g1_A029 Roots plus adde... 191 1e-048
gb|DR017840.1|DR017840 STRS1_18_G04.g1_A034 Shoot tip pitch... 191 1e-048
gb|DR055871.1|DR055871 RTCA1_26_B02.g1_A029 Roots minus cal... 191 1e-048
gb|DR089794.1|DR089794 RTAL1_10_G10.g1_A029 Roots plus adde... 191 1e-048
gb|DR694166.1|DR694166 EST1084256 Normalized pine embryo li... 191 1e-048
gb|CV035788.1|CV035788 RTNACL1_42_A06.g1_A029 Roots plus ad... 190 2e-048
gb|DR058721.1|DR058721 RTNIT1_13_B05.g1_A029 Roots minus ni... 191 6e-048
gb|DR683009.1|DR683009 EST1073084 Normalized pine embryo li... 191 6e-048
gb|BE187297.1|BE187297 NXNV_162_B12_F Nsf Xylem Normal wood... 188 2e-047
gb|BQ699182.1|BQ699182 NXRV120_E07_F NXRV (Nsf Xylem Root w... 188 8e-047
gb|BQ107356.1|BQ107356 NXLV092_F12_F NXLV (Nsf Xylem Late w... 187 1e-046
gb|DN609369.1|DN609369 EST962419 Subtracted pine embryo lib... 187 1e-046
gb|DT627731.1|DT627731 EST1156480 Subtracted pine embryo li... 187 1e-046
gb|CO160128.1|CO160128 FLD1_19_A03.b1_A029 Root flooded Pin... 179 5e-045
gb|AW011230.1|AW011230 ST18C07 Pine TriplEx shoot tip libra... 182 5e-045
gb|AW064721.1|AW064721 ST35A02 Pine TriplEx shoot tip libra... 177 9e-044
gb|CF672548.1|CF672548 RTCNT1_64_H05.b1_A029 Root control P... 173 3e-043
gb|BG039422.1|BG039422 NXSI_098_H06_F NXSI (Nsf Xylem Side ... 173 2e-042
gb|DR014618.1|DR014618 HEAT1_50_C10.g1_A029 Root at 37 C fo... 165 1e-040
gb|DR089709.1|DR089709 RTAL1_10_G10.b1_A029 Roots plus adde... 161 1e-039
gb|CX645893.1|CX645893 COLD1_5_H12.g1_A029 Root cold Pinus ... 158 5e-038
gb|BX253625.1|BX253625 BX253625 Pinus pinaster differenciat... 153 2e-036
gb|CX712484.1|CX712484 RTPQ1_2_G01.g2_A032 Roots treated wi... 149 2e-035
gb|DR744595.1|DR744595 RTCU1_23_C03.g1_A029 Roots plus adde... 146 3e-035
gb|CO367704.1|CO367704 RTK1_36_B04.b1_A029 Roots minus pota... 147 1e-034
gb|CF475707.1|CF475707 RTWW2_11_G10.g1_A021 Well-watered lo... 144 2e-034
gb|CO199374.1|CO199374 GEO1_20_F02.g1_A029 Root gravitropis... 140 3e-033
gb|DR058638.1|DR058638 RTNIT1_13_B05.b1_A029 Roots minus ni... 139 4e-033
gb|DT630456.1|DT630456 EST1154868 Subtracted pine embryo li... 134 2e-032
gb|DN632101.1|DN632101 EST982917 Subtracted pine embryo lib... 134 2e-032
gb|BG318905.1|BG318905 NXPV_021_C11_F NXPV (Nsf Xylem Plani... 139 2e-032
gb|DR682839.1|DR682839 EST1072914 Normalized pine embryo li... 138 5e-032
gb|BX252707.1|BX252707 BX252707 Pinus pinaster differenciat... 135 6e-032
gb|DR012588.1|DR012588 HEAT1_13_G02.g1_A029 Root at 37 C fo... 136 3e-031
gb|DN612978.1|DN612978 EST966028 Subtracted pine embryo lib... 109 3e-024
gb|AW290426.1|AW290426 NXNV020E04F Nsf Xylem Normal wood Ve... 103 2e-021
gb|BQ698277.1|BQ698277 NXPV_065_F10_F NXPV (Nsf Xylem Plani... 103 2e-021
gb|CD027086.1|CD027086 NXNV020E04 Nsf Xylem Normal wood Ver... 103 2e-021
>gb|BX253213.1|BX253213 BX253213 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP079H01 similar to POLYPOSIS LOCUS PROTEIN,
mRNA sequence
Length = 501
Score = 193 bits (417), Expect(2) = 3e-049
Identities = 72/113 (63%), Positives = 90/113 (79%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G + MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 36 GSSLQKAMGWGSFLKTVLYNIDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 215
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 216 SFITLFELSFSRLLEWLPFWPYVKLIATCWLVLPVFNGAAYVYENFVRQMLLN 374
Score = 112 bits (239), Expect = 5e-024
Identities = 57/106 (53%), Positives = 70/106 (66%)
Frame = -1 / -3
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 373 FRSICLTKFSYT*AAPLNTGSTSQQVAISLT*GQNGNHSSSREKESSNSVMNEYRTQYVS 194
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPI 103
HC*SS+ +SIAL E YRG*++ +GPA S + LRK P P+
Sbjct: 193 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSILYKTVLRKLPQPM 56
Score = 22.6 bits (43), Expect(2) = 3e-049
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 420 SPSTKNSVERFVHQYGPDALD 482
>gb|DR682838.1|DR682838 EST1072913 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAC56, mRNA sequence
Length = 895
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / -1
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 811 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 632
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 631 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 473
Score = 115 bits (245), Expect = 7e-025
Identities = 58/113 (51%), Positives = 73/113 (64%)
Frame = -1 / +3
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 474 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 653
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG*++ +GPA S+ + LRK P P+ + P
Sbjct: 654 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELP 812
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / -1
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 427 SPSTKNSVERFVHQYGPDALD 365
>gb|DR014767.1|DR014767 HEAT1_51_B06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_B06_A029 5', mRNA sequence
Length = 870
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 180 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 359
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 360 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 518
Score = 112 bits (240), Expect = 3e-024
Identities = 57/113 (50%), Positives = 72/113 (63%)
Frame = -1 / -3
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 517 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 338
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P P+ + P
Sbjct: 337 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRKLPQPMAIRKELP 179
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 564 SPSTKNSVERFVHQYGPDALD 626
>gb|DR017755.1|DR017755 STRS1_18_G04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_18_G04_A034 3', mRNA sequence
Length = 846
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +2
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 71 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 250
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 251 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 409
Score = 115 bits (245), Expect = 7e-025
Identities = 58/113 (51%), Positives = 73/113 (64%)
Frame = -1 / -1
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 408 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 229
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG*++ +GPA S+ + LRK P P+ + P
Sbjct: 228 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELP 70
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 455 SPSTKNSVERFVHQYGPDALD 517
>gb|DR688845.1|DR688845 EST1078931 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACB29 3' end, mRNA sequence
Length = 846
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 240 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 419
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 420 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 578
Score = 115 bits (245), Expect = 7e-025
Identities = 58/113 (51%), Positives = 73/113 (64%)
Frame = -1 / -3
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 577 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 398
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG*++ +GPA S+ + LRK P P+ + P
Sbjct: 397 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELP 239
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 624 SPSTKNSVERFVHQYGPDALD 686
>gb|DR683008.1|DR683008 EST1073083 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAD72, mRNA sequence
Length = 831
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / -2
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 779 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 600
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 599 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 441
Score = 115 bits (245), Expect = 7e-025
Identities = 58/113 (51%), Positives = 73/113 (64%)
Frame = -1 / +1
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 442 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 621
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG*++ +GPA S+ + LRK P P+ + P
Sbjct: 622 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELP 780
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / -2
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 395 SPSTKNSVERFVHQYGPDALD 333
>gb|DR012508.1|DR012508 HEAT1_13_G02.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_13_G02_A029 3', mRNA sequence
Length = 826
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 33 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 212
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 213 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 371
Score = 112 bits (240), Expect = 3e-024
Identities = 57/113 (50%), Positives = 72/113 (63%)
Frame = -1 / -1
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 370 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 191
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P P+ + P
Sbjct: 190 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRKLPQPMAIRKELP 32
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 417 SPSTKNSVERFVHQYGPDALD 479
>gb|DR385882.1|DR385882 RTHG1_11_A07.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_11_A07_A029 5', mRNA sequence
Length = 825
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 147 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 326
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 327 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 485
Score = 112 bits (240), Expect = 3e-024
Identities = 57/113 (50%), Positives = 72/113 (63%)
Frame = -1 / -3
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 484 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 305
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P P+ + P
Sbjct: 304 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRKLPQPMAIRKELP 146
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 531 SPSTKNSVERFVHQYGPDALD 593
>gb|CV035712.1|CV035712 RTNACL1_42_A06.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_42_A06_A029 3', mRNA sequence
Length = 822
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / -3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 490 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 311
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 310 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 152
Score = 112 bits (240), Expect = 3e-024
Identities = 57/113 (50%), Positives = 72/113 (63%)
Frame = -1 / +3
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 153 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 332
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P P+ + P
Sbjct: 333 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRKLPQPMAIRKELP 491
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / -3
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 106 SPSTKNSVERFVHQYGPDALD 44
>gb|DT631560.1|DT631560 EST1146491 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFA13 3' end, mRNA sequence
Length = 800
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +1
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 292 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 471
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 472 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 630
Score = 115 bits (245), Expect = 7e-025
Identities = 58/113 (51%), Positives = 73/113 (64%)
Frame = -1 / -1
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 629 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 450
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG*++ +GPA S+ + LRK P P+ + P
Sbjct: 449 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELP 291
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 676 SPSTKNSVERFVHQYGPDALD 738
>gb|CO160201.1|CO160201 FLD1_19_A03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_19_A03_A029 5', mRNA sequence
Length = 750
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +2
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 92 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 271
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 272 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 430
Score = 112 bits (240), Expect = 3e-024
Identities = 57/113 (50%), Positives = 72/113 (63%)
Frame = -1 / -1
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 429 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 250
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P P+ + P
Sbjct: 249 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRKLPQPMAIRKELP 91
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 476 SPSTKNSVERFVHQYGPDALD 538
>gb|CF672623.1|CF672623 RTCNT1_64_H05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_64_H05_A029 5', mRNA sequence
Length = 729
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 93 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 272
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 273 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 431
Score = 112 bits (240), Expect = 3e-024
Identities = 57/113 (50%), Positives = 72/113 (63%)
Frame = -1 / -3
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 430 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 251
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P P+ + P
Sbjct: 250 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRKLPQPMAIRKELP 92
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 477 SPSTKNSVERFVHQYGPDALD 539
>gb|DR091888.1|DR091888 RTAL1_24_D06.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_24_D06_A029 5', mRNA sequence
Length = 720
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +1
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 142 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 321
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 322 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 480
Score = 115 bits (245), Expect = 7e-025
Identities = 58/113 (51%), Positives = 73/113 (64%)
Frame = -1 / -2
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 479 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 300
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG*++ +GPA S+ + LRK P P+ + P
Sbjct: 299 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELP 141
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 526 SPSTKNSVERFVHQYGPDALD 588
>gb|DR017840.1|DR017840 STRS1_18_G04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_18_G04_A034 5', mRNA sequence
Length = 718
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +2
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 197 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 376
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 377 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 535
Score = 115 bits (245), Expect = 7e-025
Identities = 58/113 (51%), Positives = 73/113 (64%)
Frame = -1 / -2
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 534 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 355
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG*++ +GPA S+ + LRK P P+ + P
Sbjct: 354 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELP 196
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 581 SPSTKNSVERFVHQYGPDALD 643
>gb|DR055871.1|DR055871 RTCA1_26_B02.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_26_B02_A029 5', mRNA sequence
Length = 667
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +1
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 43 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 222
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 223 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 381
Score = 112 bits (240), Expect = 3e-024
Identities = 57/113 (50%), Positives = 72/113 (63%)
Frame = -1 / -3
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 380 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 201
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P P+ + P
Sbjct: 200 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRKLPQPMAIRKELP 42
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 427 SPSTKNSVERFVHQYGPDALD 489
>gb|DR089794.1|DR089794 RTAL1_10_G10.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_10_G10_A029 5', mRNA sequence
Length = 665
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +1
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 76 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 255
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 256 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 414
Score = 115 bits (245), Expect = 7e-025
Identities = 58/113 (51%), Positives = 73/113 (64%)
Frame = -1 / -1
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 413 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 234
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG*++ +GPA S+ + LRK P P+ + P
Sbjct: 233 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELP 75
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 460 SPSTKNSVERFVHQYGPDALD 522
>gb|DR694166.1|DR694166 EST1084256 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE887 3' end, mRNA sequence
Length = 627
Score = 191 bits (412), Expect(2) = 1e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +2
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 89 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 268
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 269 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 427
Score = 115 bits (245), Expect = 7e-025
Identities = 58/113 (51%), Positives = 73/113 (64%)
Frame = -1 / -1
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 426 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 247
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG*++ +GPA S+ + LRK P P+ + P
Sbjct: 246 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELP 88
Score = 22.6 bits (43), Expect(2) = 1e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 473 SPSTKNSVERFVHQYGPDALD 535
>gb|CV035788.1|CV035788 RTNACL1_42_A06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_42_A06_A029 5', mRNA sequence
Length = 713
Score = 190 bits (410), Expect(2) = 2e-048
Identities = 71/106 (66%), Positives = 88/106 (83%)
Frame = +2 / -3
Query: 104 MGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFE 283
MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLYSFITLFE
Sbjct: 708 MGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFE 529
Query: 284 LTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
L+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 528 LSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 391
Score = 111 bits (238), Expect = 6e-024
Identities = 56/106 (52%), Positives = 70/106 (66%)
Frame = -1 / +2
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 392 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 571
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPI 103
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P P+
Sbjct: 572 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRKLPQPM 709
Score = 22.6 bits (43), Expect(2) = 2e-048
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / -3
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 345 SPSTKNSVERFVHQYGPDALD 283
>gb|DR058721.1|DR058721 RTNIT1_13_B05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_B05_A029 5', mRNA sequence
Length = 619
Score = 191 bits (412), Expect = 6e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 228 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 407
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 408 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 566
Score = 112 bits (240), Expect = 3e-024
Identities = 57/113 (50%), Positives = 72/113 (63%)
Frame = -1 / -1
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 565 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 386
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P P+ + P
Sbjct: 385 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRKLPQPMAIRKELP 227
>gb|DR683009.1|DR683009 EST1073084 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAD72 3' end, mRNA sequence
Length = 687
Score = 191 bits (412), Expect = 6e-048
Identities = 72/113 (63%), Positives = 89/113 (78%)
Frame = +2 / +1
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 292 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 471
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 472 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 630
Score = 115 bits (245), Expect = 7e-025
Identities = 58/113 (51%), Positives = 73/113 (64%)
Frame = -1 / -2
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 629 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 450
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG*++ +GPA S+ + LRK P P+ + P
Sbjct: 449 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELP 291
>gb|BE187297.1|BE187297 NXNV_162_B12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_162_B12 5' similar to Arabidopsis thaliana
sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 574
Score = 188 bits (404), Expect(2) = 2e-047
Identities = 70/106 (66%), Positives = 87/106 (82%)
Frame = +2 / +3
Query: 104 MGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFE 283
MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLYSFITLFE
Sbjct: 21 MGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFE 200
Query: 284 LTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
L+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FV M +N
Sbjct: 201 LSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVXQMLLN 338
Score = 113 bits (241), Expect = 2e-024
Identities = 56/108 (51%), Positives = 71/108 (65%)
Frame = -1 / -1
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 337 FRSIXLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 158
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILL 97
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P P+ +
Sbjct: 157 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRKLPQPMAI 14
Score = 22.6 bits (43), Expect(2) = 2e-047
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 384 SPSTKNSVERFVHQYGPDALD 446
>gb|BQ699182.1|BQ699182 NXRV120_E07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV120_E07 5' similar to Arabidopsis thaliana
sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 524
Score = 188 bits (404), Expect = 8e-047
Identities = 71/113 (62%), Positives = 88/113 (77%)
Frame = +2 / +1
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L PLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 55 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLXPLYSSIRAIESPSRLDDQQWLTYWVLY 234
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 235 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 393
Score = 112 bits (240), Expect = 3e-024
Identities = 57/113 (50%), Positives = 72/113 (63%)
Frame = -1 / -1
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 392 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 213
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P P+ + P
Sbjct: 212 HC*SSSRDGLSIALMEEYRGXSNVTTGPANMSRLYKTALRKLPQPMAIRKELP 54
>gb|BQ107356.1|BQ107356 NXLV092_F12_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV092_F12 5' similar to Arabidopsis thaliana
sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 560
Score = 187 bits (403), Expect = 1e-046
Identities = 71/113 (62%), Positives = 88/113 (77%)
Frame = +2 / +1
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 97 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 276
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++ WLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 277 SFITLFELSFSRLL*WLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 435
Score = 113 bits (241), Expect = 2e-024
Identities = 57/119 (47%), Positives = 75/119 (63%)
Frame = -1 / -1
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+H K SSN V+NEY TQ VS
Sbjct: 434 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHYSSREKESSNSVMNEYRTQYVS 255
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPPVEQNYR 64
HC*SS+ +SIAL E YRG*++ +GPA S+ + LRK P P+ + P +++
Sbjct: 254 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELPPNPSFQ 78
>gb|DN609369.1|DN609369 EST962419 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAAC05, mRNA sequence
Length = 635
Score = 187 bits (403), Expect = 1e-046
Identities = 71/113 (62%), Positives = 88/113 (77%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G M GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 246 GSSLRIAMVWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 425
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 426 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 584
Score = 109 bits (232), Expect = 4e-023
Identities = 56/113 (49%), Positives = 71/113 (62%)
Frame = -1 / -2
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 583 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 404
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P + + P
Sbjct: 403 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRKLPQTMAIRKELP 245
>gb|DT627731.1|DT627731 EST1156480 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMCQ04 5' end, mRNA sequence
Length = 638
Score = 187 bits (403), Expect = 1e-046
Identities = 71/113 (62%), Positives = 88/113 (77%)
Frame = +2 / -3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G M GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 393 GSSLRIAMVWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 214
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 213 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 55
Score = 109 bits (232), Expect = 4e-023
Identities = 56/113 (49%), Positives = 71/113 (62%)
Frame = -1 / +2
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F +I TK+S T*AAPLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 56 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 235
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG ++ +GPA S+ + LRK P + + P
Sbjct: 236 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRKLPQTMAIRKELP 394
>gb|CO160128.1|CO160128 FLD1_19_A03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_19_A03_A029 3', mRNA sequence
Length = 759
Score = 179 bits (386), Expect(2) = 5e-045
Identities = 66/100 (66%), Positives = 83/100 (83%)
Frame = +2 / +1
Query: 122 LKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPI 301
LK + N D+L GP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLYSFITLFEL+F+ +
Sbjct: 1 LKAVLYNLDILXGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFSRL 180
Query: 302 IEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
+EWLPFW Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 181 LEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 300
Score = 22.6 bits (43), Expect(2) = 5e-045
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 346 SPSTKNSVERFVHQYGPDALD 408
>gb|AW011230.1|AW011230 ST18C07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST18C07, mRNA sequence
Length = 533
Score = 182 bits (391), Expect = 5e-045
Identities = 68/112 (60%), Positives = 86/112 (76%)
Frame = +2 / +1
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 187 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 366
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFV 418
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGA YVY++ V+ M +
Sbjct: 367 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAXYVYENXVKXMLL 522
Score = 108 bits (230), Expect = 8e-023
Identities = 55/113 (48%), Positives = 70/113 (61%)
Frame = -1 / -1
Query: 420 FTNIGRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VS 241
F + T +S T* APLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VS
Sbjct: 524 FRSXCLTXFSYT*XAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 345
Query: 240 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
HC*SS+ +SIAL E YRG*++ +GPA S+ + LRK P P+ + P
Sbjct: 344 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELP 186
>gb|AW064721.1|AW064721 ST35A02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST35A02, mRNA sequence
Length = 566
Score = 177 bits (382), Expect = 9e-044
Identities = 66/105 (62%), Positives = 82/105 (78%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 225 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 404
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDH 397
SFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGA YVY++
Sbjct: 405 SFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGATYVYEN 539
Score = 108 bits (231), Expect = 6e-023
Identities = 54/106 (50%), Positives = 68/106 (64%)
Frame = -1 / -2
Query: 399 KWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*SSTG 220
K+S T* APLN G T+QQ+ S QNG+HS K SSN V+NEY TQ VSHC*SS+
Sbjct: 541 KFSYT*VAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVSHC*SSSR 362
Query: 219 FFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
+SIAL E YRG*++ +GPA S+ + LRK P P+ + P
Sbjct: 361 DGLSIALMEEYRG*SNVTTGPANMSRLYKTALRKLPQPMAIRKELP 224
>gb|CF672548.1|CF672548 RTCNT1_64_H05.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_64_H05_A029 3', mRNA sequence
Length = 765
Score = 173 bits (373), Expect(2) = 3e-043
Identities = 63/92 (68%), Positives = 79/92 (85%)
Frame = +2 / +1
Query: 146 DVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWS 325
D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLYSFITLFEL+F+ ++EWLPFW
Sbjct: 4 DIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWP 183
Query: 326 YAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
Y KL CWLVLP FNGAAYVY++FVR M +N
Sbjct: 184 YLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 279
Score = 22.6 bits (43), Expect(2) = 3e-043
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 325 SPSTKNSVERFVHQYGPDALD 387
>gb|BG039422.1|BG039422 NXSI_098_H06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_098_H06 5' similar to Arabidopsis thaliana
sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 553
Score = 173 bits (372), Expect = 2e-042
Identities = 65/103 (63%), Positives = 79/103 (76%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DD QWLTYWVLY
Sbjct: 243 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDXQWLTYWVLY 422
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVY 391
SFITLFEL+F+ ++ WLPFW Y KL CWLVLP FNGAAYVY
Sbjct: 423 SFITLFELSFSRLLXWLPFWPYLKLIATCWLVLPXFNGAAYVY 551
Score = 101 bits (215), Expect = 9e-021
Identities = 50/102 (49%), Positives = 63/102 (61%)
Frame = -1 / -1
Query: 387 T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*SSTGFFVS 208
T*AAPLN G T+QQ+ S QNG+H K SSN V+NEY TQ VSHC SS+ +S
Sbjct: 547 T*AAPLNXGSTSQQVAISLR*GQNGNHXSSREKESSNSVMNEYRTQYVSHCXSSSRDGLS 368
Query: 207 IALTEAYRG*ASDMSGPARTSKFLASTLRKDPDPILLSAPPP 82
IAL E YRG ++ +GPA S+ + LRK P P+ + P
Sbjct: 367 IALMEEYRGYSNVTTGPANMSRLYKTALRKLPQPMAIRKELP 242
>gb|DR014618.1|DR014618 HEAT1_50_C10.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_50_C10_A029 5', mRNA sequence
Length = 778
Score = 165 bits (354), Expect(2) = 1e-040
Identities = 60/87 (68%), Positives = 75/87 (86%)
Frame = +2 / +3
Query: 161 PLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLF 340
P+++L YPLY+S+RAIE+ + +DDQQWLTYWVLYSFITLFEL+F+ ++EWLPFW Y KL
Sbjct: 27 PVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWPYLKLI 206
Query: 341 FNCWLVLPWFNGAAYVYDHFVRPMFVN 421
CWLVLP FNGAAYVY++FVR M +N
Sbjct: 207 ATCWLVLPVFNGAAYVYENFVRQMLLN 287
Score = 22.6 bits (43), Expect(2) = 1e-040
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 333 SPSTKNSVERFVHQYGPDALD 395
>gb|DR089709.1|DR089709 RTAL1_10_G10.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_10_G10_A029 3', mRNA sequence
Length = 712
Score = 161 bits (346), Expect(2) = 1e-039
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +2 / +2
Query: 167 ISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLFFN 346
++L YPLY+S+RAIE+ + +DDQQWLTYWVLYSFITLFEL+F+ ++EWLPFW Y KL
Sbjct: 2 VTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWPYLKLIAT 181
Query: 347 CWLVLPWFNGAAYVYDHFVRPMFVN 421
CWLVLP FNGAAYVY++FVR M +N
Sbjct: 182 CWLVLPVFNGAAYVYENFVRQMLLN 256
Score = 22.6 bits (43), Expect(2) = 1e-039
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 302 SPSTKNSVERFVHQYGPDALD 364
>gb|CX645893.1|CX645893 COLD1_5_H12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_5_H12_A029 5', mRNA sequence
Length = 583
Score = 158 bits (340), Expect = 5e-038
Identities = 55/98 (56%), Positives = 75/98 (76%)
Frame = +2 / +1
Query: 119 FLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAP 298
F +A++FD AGP++ L YPLYAS+RAIE+ + +DDQQWLTYW+LYS ITLFEL+F
Sbjct: 25 FFGAIARHFDTFAGPVVMLLYPLYASIRAIESPSELDDQQWLTYWILYSLITLFELSFYK 204
Query: 299 IIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPM 412
++ W+P W Y KL + WLV P FNGAAY+Y+ ++R +
Sbjct: 205 VLAWIPIWPYVKLVLSFWLVSPMFNGAAYIYEKYIRKL 318
>gb|BX253625.1|BX253625 BX253625 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP086B03 similar to POLYPOSIS LOCUS PROTEIN,
mRNA sequence
Length = 500
Score = 153 bits (328), Expect = 2e-036
Identities = 55/90 (61%), Positives = 70/90 (77%)
Frame = +2 / +2
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G + MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 230 GSSLQKAMGWGSFLKTVLYNIDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 409
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCW 352
SFITLFEL+F+ ++EWLPFW Y KL CW
Sbjct: 410 SFITLFELSFSRLLEWLPFWPYVKLIATCW 499
>gb|CX712484.1|CX712484 RTPQ1_2_G01.g2_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_2_G01_A032 5', mRNA sequence
Length = 903
Score = 149 bits (321), Expect = 2e-035
Identities = 58/112 (51%), Positives = 79/112 (70%)
Frame = +2 / -1
Query: 128 VLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIE 307
V+ K+ +A P + L YPLYAS+RA+ + + +DDQQWLTYWVLYS ITLFELTF I+
Sbjct: 870 VVXKHIIKVAWPTVMLIYPLYASIRAMXSPSELDDQQWLTYWVLYSLITLFELTFYKILA 691
Query: 308 WLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQIVNIWYIPRNEK 463
W+P W Y KL WLVLP FNGAAY+Y+++VR V ++ + +P+ +K
Sbjct: 690 WIPIWPYVKLVLLFWLVLPMFNGAAYIYENYVRRFVVAKEQPSSPELPKGKK 535
>gb|DR744595.1|DR744595 RTCU1_23_C03.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_C03_A029 5', mRNA sequence
Length = 599
Score = 146 bits (314), Expect(2) = 3e-035
Identities = 54/77 (70%), Positives = 66/77 (85%)
Frame = +2 / -2
Query: 191 ASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWF 370
+S+RAIE+ + +DDQQWLTYWVLYSFITLFEL+F+ ++EWLPFW Y KL CWLVLP F
Sbjct: 598 SSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVF 419
Query: 371 NGAAYVYDHFVRPMFVN 421
NGAAYVY++FVR M +N
Sbjct: 418 NGAAYVYENFVRQMLLN 368
Score = 22.6 bits (43), Expect(2) = 3e-035
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / -2
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 322 SPSTKNSVERFVHQYGPDALD 260
>gb|CO367704.1|CO367704 RTK1_36_B04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_B04_A029 3', mRNA sequence
Length = 837
Score = 147 bits (315), Expect = 1e-034
Identities = 54/78 (69%), Positives = 66/78 (84%)
Frame = +2 / -2
Query: 188 YASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPW 367
Y+S+RAIE+ + +DDQQWLTYWV YSFITLFEL+F+ ++EWLPFW Y KL CWLVLP
Sbjct: 329 YSSIRAIESPSRLDDQQWLTYWVPYSFITLFELSFSRLLEWLPFWPYVKLIATCWLVLPV 150
Query: 368 FNGAAYVYDHFVRPMFVN 421
FNGAAYVY++FVR M +N
Sbjct: 149 FNGAAYVYENFVRQMLLN 96
>gb|CF475707.1|CF475707 RTWW2_11_G10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_11_G10_A021 5', mRNA sequence
Length = 731
Score = 144 bits (309), Expect(2) = 2e-034
Identities = 53/75 (70%), Positives = 64/75 (85%)
Frame = +2 / -3
Query: 197 VRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNG 376
+RAIE+ + +DDQQWLTYWVLYSFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNG
Sbjct: 729 IRAIESPSRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNG 550
Query: 377 AAYVYDHFVRPMFVN 421
AAYVY++FVR M +N
Sbjct: 549 AAYVYENFVRQMLLN 505
Score = 22.6 bits (43), Expect(2) = 2e-034
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / -3
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 459 SPSTKNSVERFVHQYGPDALD 397
>gb|CO199374.1|CO199374 GEO1_20_F02.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_20_F02_A029 5', mRNA sequence
Length = 660
Score = 140 bits (300), Expect(2) = 3e-033
Identities = 52/73 (71%), Positives = 62/73 (84%)
Frame = +2 / -2
Query: 200 RAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGA 379
RAIE+ + +DDQQWLTYWVLYSFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGA
Sbjct: 659 RAIESPSRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGA 480
Query: 380 AYVYDHFVRPMFV 418
AYVY++FVR M +
Sbjct: 479 AYVYENFVRQMLL 441
Score = 22.6 bits (43), Expect(2) = 3e-033
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / -2
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 392 SPSTKNSVERFVHQYGPDALD 330
>gb|DR058638.1|DR058638 RTNIT1_13_B05.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_B05_A029 3', mRNA sequence
Length = 659
Score = 139 bits (299), Expect(2) = 4e-033
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = +2 / +1
Query: 200 RAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGA 379
RAIE+ + +DDQQWLTYWVLYSFITL EL+F+ ++EWLPFW Y KL CWLVLP FNGA
Sbjct: 1 RAIESPSRLDDQQWLTYWVLYSFITLXELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGA 180
Query: 380 AYVYDHFVRPMFVN 421
AYVY++FVR M +N
Sbjct: 181 AYVYENFVRQMLLN 222
Score = 22.6 bits (43), Expect(2) = 4e-033
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +1
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 268 SPSTKNSVERFVHQYGPDALD 330
>gb|DT630456.1|DT630456 EST1154868 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PIME915, mRNA sequence
Length = 830
Score = 134 bits (288), Expect(2) = 2e-032
Identities = 51/99 (51%), Positives = 65/99 (65%)
Frame = +2 / +2
Query: 107 GSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFEL 286
GS + L GP + L YPLYAS+RAIE+ + VDD+QWLTYW+LYSF+TL E+
Sbjct: 104 GSMGMYWTIVSYLQSLTGPGLMLLYPLYASIRAIESPSKVDDEQWLTYWILYSFLTLVEM 283
Query: 287 TFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFV 403
A + W+PFW KL F WLVLP F GA+++Y FV
Sbjct: 284 AAATLFSWIPFWHPVKLAFIAWLVLPQFRGASFIYQRFV 400
Score = 24.9 bits (48), Expect(2) = 2e-032
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2 / +2
Query: 470 KSDDVLSAAERYIEQNGPEAFE 535
+S + E +I +NGP+AF+
Sbjct: 494 QSPKAKAKVEHFISENGPDAFD 559
>gb|DN632101.1|DN632101 EST982917 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACJ76, mRNA sequence
Length = 777
Score = 134 bits (288), Expect(2) = 2e-032
Identities = 51/99 (51%), Positives = 65/99 (65%)
Frame = +2 / +1
Query: 107 GSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFEL 286
GS + L GP + L YPLYAS+RAIE+ + VDD+QWLTYW+LYSF+TL E+
Sbjct: 82 GSMGMYWTIVSYLQSLTGPGLMLLYPLYASIRAIESPSKVDDEQWLTYWILYSFLTLVEM 261
Query: 287 TFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFV 403
A + W+PFW KL F WLVLP F GA+++Y FV
Sbjct: 262 AAATLFSWIPFWHPVKLAFIAWLVLPQFRGASFIYQRFV 378
Score = 24.9 bits (48), Expect(2) = 2e-032
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 470 KSDDVLSAAERYIEQNGPEAFE 535
+S + E +I +NGP+AF+
Sbjct: 472 QSPKAKAKVEHFISENGPDAFD 537
>gb|BG318905.1|BG318905 NXPV_021_C11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_021_C11 5' similar to Arabidopsis
thaliana sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 503
Score = 139 bits (299), Expect = 2e-032
Identities = 55/96 (57%), Positives = 69/96 (71%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 213 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 392
Query: 263 SFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWF 370
SFITLFEL+F+ ++EWLP Y L C LVL F
Sbjct: 393 SFITLFELSFSRLLEWLPXXXYLXLIATCXLVLXXF 500
>gb|DR682839.1|DR682839 EST1072914 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAC56 3' end, mRNA sequence
Length = 803
Score = 138 bits (297), Expect = 5e-032
Identities = 50/75 (66%), Positives = 65/75 (86%)
Frame = +2 / +2
Query: 113 GSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTF 292
GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLYSFITLFEL+F
Sbjct: 578 GSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSF 757
Query: 293 APIIEWLPFWSYAKL 337
+ ++EWLPFW+Y KL
Sbjct: 758 SRLLEWLPFWAYLKL 802
>gb|BX252707.1|BX252707 BX252707 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP069D07 similar to POLYPOSIS LOCUS PROTEIN,
mRNA sequence
Length = 676
Score = 135 bits (290), Expect(2) = 6e-032
Identities = 49/66 (74%), Positives = 57/66 (86%)
Frame = +2 / +2
Query: 224 VDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFV 403
+DDQQWLTYWVLYSFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++FV
Sbjct: 11 LDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWPYVKLIATCWLVLPVFNGAAYVYENFV 190
Query: 404 RPMFVN 421
R M +N
Sbjct: 191 RQMLLN 208
Score = 22.6 bits (43), Expect(2) = 6e-032
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 254 SPSTKNSVERFVHQYGPDALD 316
>gb|DR012588.1|DR012588 HEAT1_13_G02.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_13_G02_A029 5', mRNA sequence
Length = 722
Score = 136 bits (291), Expect = 3e-031
Identities = 50/80 (62%), Positives = 64/80 (80%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DDQQWLTYWVLY
Sbjct: 483 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLY 662
Query: 263 SFITLFELTFAPIIEWLPFW 322
SFITLFEL+F+ ++EWLPFW
Sbjct: 663 SFITLFELSFSRLLEWLPFW 722
>gb|DN612978.1|DN612978 EST966028 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABM55, mRNA sequence
Length = 424
Score = 109 bits (233), Expect(2) = 3e-024
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = +2 / +3
Query: 251 WVLYSFITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
WVLYSFITLFEL+F+ ++EWLPFW Y KL CWLVLP FNGAAYVY++ VR M +N
Sbjct: 3 WVLYSFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENLVRQMLLN 173
Score = 22.6 bits (43), Expect(2) = 3e-024
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 473 SDDVLSAAERYIEQNGPEAFE 535
S ++ ER++ Q GP+A +
Sbjct: 219 SPSTKNSVERFVHQYGPDALD 281
>gb|AW290426.1|AW290426 NXNV020E04F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV020E04 5', mRNA sequence
Length = 325
Score = 103 bits (220), Expect = 2e-021
Identities = 40/68 (58%), Positives = 49/68 (72%)
Frame = +2 / +1
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + D+ AGP+++L YPLY+S+RA + +DDQQWLTYWVLY
Sbjct: 121 GSSLRIAMGWGSFLKAVLXXLDIFAGPVVTLXYPLYSSIRAXXXPSRLDDQQWLTYWVLY 300
Query: 263 SFITLFEL 286
SFITLFEL
Sbjct: 301 SFITLFEL 324
>gb|BQ698277.1|BQ698277 NXPV_065_F10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_065_F10 5' similar to Arabidopsis
thaliana sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 435
Score = 103 bits (220), Expect = 2e-021
Identities = 40/67 (59%), Positives = 50/67 (74%)
Frame = +2 / +3
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + N D+ AGP+++L YPLY+S+RAIE+ + +DD QWLTYWVLY
Sbjct: 213 GSSLRIAMGWGSFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDXQWLTYWVLY 392
Query: 263 SFITLFE 283
SFITL E
Sbjct: 393 SFITLXE 413
>gb|CD027086.1|CD027086 NXNV020E04 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV020E04 5' similar to Arabidopsis thaliana sequence
At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 325
Score = 103 bits (220), Expect = 2e-021
Identities = 40/68 (58%), Positives = 49/68 (72%)
Frame = +2 / +1
Query: 83 GGGAESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLY 262
G MG GSFLK + D+ AGP+++L YPLY+S+RA + +DDQQWLTYWVLY
Sbjct: 121 GSSLRIAMGWGSFLKAVLXXLDIFAGPVVTLXYPLYSSIRAXXXPSRLDDQQWLTYWVLY 300
Query: 263 SFITLFEL 286
SFITLFEL
Sbjct: 301 SFITLFEL 324
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 536,103,313
Number of Sequences: 355925
Number of extensions: 7732672
Number of successful extensions: 48041
Number of sequences better than 1.0e-020: 63
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 15747145680
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)