TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2907809.2.1
(614 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL750053.1|AL750053 AL750053 AS Pinus pinaster cDNA clon... 169 2e-041
gb|BX254897.1|BX254897 BX254897 Pinus pinaster differenciat... 169 2e-041
gb|BX255469.1|BX255469 BX255469 Pinus pinaster differenciat... 169 2e-041
gb|BX683032.1|BX683032 BX683032 Pinus pinaster differenciat... 169 2e-041
gb|BX784105.1|BX784105 BX784105 Pinus pinaster differenciat... 169 2e-041
gb|BX253341.1|BX253341 BX253341 Pinus pinaster differenciat... 167 7e-041
gb|CF395509.1|CF395509 RTDS2_12_E02.b1_A021 Drought-stresse... 167 7e-041
gb|CF395603.1|CF395603 RTDS2_12_E02.g1_A021 Drought-stresse... 167 7e-041
gb|CF397709.1|CF397709 RTDS3_1_E10.b2_A022 Drought-stressed... 167 7e-041
gb|CF670979.1|CF670979 RTCNT1_53_H03.g1_A029 Root control P... 167 7e-041
gb|CO161874.1|CO161874 FLD1_31_F01.g1_A029 Root flooded Pin... 167 7e-041
gb|CO163824.1|CO163824 FLD1_44_B07.b1_A029 Root flooded Pin... 167 7e-041
gb|CO164148.1|CO164148 FLD1_46_D06.b1_A029 Root flooded Pin... 167 7e-041
gb|CO164222.1|CO164222 FLD1_46_D06.g1_A029 Root flooded Pin... 167 7e-041
gb|CO165879.1|CO165879 FLD1_57_F05.g1_A029 Root flooded Pin... 167 7e-041
gb|CO166083.1|CO166083 FLD1_59_E04.b1_A029 Root flooded Pin... 167 7e-041
gb|CO166149.1|CO166149 FLD1_59_E04.g1_A029 Root flooded Pin... 167 7e-041
gb|CO170935.1|CO170935 NDL1_17_H11.g1_A029 Needles control ... 167 7e-041
gb|CO196919.1|CO196919 GEO1_2_C11.g1_A029 Root gravitropism... 167 7e-041
gb|DN453025.1|DN453025 EST948824 Sequencing ESTs from loblo... 167 7e-041
gb|DN612026.1|DN612026 EST965076 Subtracted pine embryo lib... 167 7e-041
gb|DN612056.1|DN612056 EST965106 Subtracted pine embryo lib... 167 7e-041
gb|DN612387.1|DN612387 EST965437 Subtracted pine embryo lib... 167 7e-041
gb|DN615021.1|DN615021 EST968071 Subtracted pine embryo lib... 167 7e-041
gb|DN627086.1|DN627086 EST977902 Subtracted pine embryo lib... 167 7e-041
gb|DN632932.1|DN632932 EST983748 Subtracted pine embryo lib... 167 7e-041
gb|DN633401.1|DN633401 EST984217 Subtracted pine embryo lib... 167 7e-041
gb|DR012626.1|DR012626 HEAT1_14_B09.b1_A029 Root at 37 C fo... 167 7e-041
gb|DR012706.1|DR012706 HEAT1_14_B09.g1_A029 Root at 37 C fo... 167 7e-041
gb|DR013434.1|DR013434 HEAT1_19_G06.b1_A029 Root at 37 C fo... 167 7e-041
gb|DR013522.1|DR013522 HEAT1_19_G06.g1_A029 Root at 37 C fo... 167 7e-041
gb|DR048766.1|DR048766 RTBOR1_11_D03.b1_A029 Roots plus add... 167 7e-041
gb|DR048846.1|DR048846 RTBOR1_11_D03.g1_A029 Roots plus add... 167 7e-041
gb|DR049543.1|DR049543 RTBOR1_17_H05.b1_A029 Roots plus add... 167 7e-041
gb|DR049615.1|DR049615 RTBOR1_17_H05.g1_A029 Roots plus add... 167 7e-041
gb|DR049759.1|DR049759 RTBOR1_18_H05.g1_A029 Roots plus add... 167 7e-041
gb|DR055038.1|DR055038 RTCA1_21_D10.b1_A029 Roots minus cal... 167 7e-041
gb|DR055114.1|DR055114 RTCA1_21_D10.g2_A029 Roots minus cal... 167 7e-041
gb|DR055813.1|DR055813 RTCA1_26_C08.b1_A029 Roots minus cal... 167 7e-041
gb|DR056990.1|DR056990 RTNIT1_1_H01.g1_A029 Roots minus nit... 167 7e-041
gb|DR089510.1|DR089510 RTAL1_9_D09.b1_A029 Roots plus added... 167 7e-041
gb|DR089589.1|DR089589 RTAL1_9_D09.g1_A029 Roots plus added... 167 7e-041
gb|DR119458.1|DR119458 RTMG1_23_H07.b1_A029 Roots minus mag... 167 7e-041
gb|DR119498.1|DR119498 RTMG1_23_D07.g1_A029 Roots minus mag... 167 7e-041
gb|DR119543.1|DR119543 RTMG1_23_H07.g1_A029 Roots minus mag... 167 7e-041
gb|DR165914.1|DR165914 RTPHOS1_8_D02.b1_A029 Roots minus ph... 167 7e-041
gb|DR165992.1|DR165992 RTPHOS1_8_D02.g1_A029 Roots minus ph... 167 7e-041
gb|DR385356.1|DR385356 RTHG1_8_E03.b1_A029 Roots plus added... 167 7e-041
gb|DR385439.1|DR385439 RTHG1_8_E03.g1_A029 Roots plus added... 167 7e-041
gb|DR742745.1|DR742745 RTCU1_6_E09.g2_A029 Roots plus added... 167 7e-041
gb|DR743632.1|DR743632 RTCU1_17_E02.b1_A029 Roots plus adde... 167 7e-041
gb|DR743705.1|DR743705 RTCU1_17_E02.g1_A029 Roots plus adde... 167 7e-041
gb|DT625058.1|DT625058 EST1159333 Sequencing ESTs from lobl... 167 7e-041
gb|AW290204.1|AW290204 NXNV015F01F Nsf Xylem Normal wood Ve... 165 2e-040
gb|CD026868.1|CD026868 NXNV015F01 Nsf Xylem Normal wood Ver... 165 2e-040
gb|DR120936.1|DR120936 RTMG1_1_D02.b1_A029 Roots minus magn... 165 2e-040
gb|DR116604.1|DR116604 RTMG1_1_D02.g1_A029 Roots minus magn... 165 2e-040
gb|DR047515.1|DR047515 RTBOR1_1_C01.g1_A029 Roots plus adde... 165 3e-040
gb|AW784112.1|AW784112 NXNV_117_H11_F Nsf Xylem Normal wood... 163 1e-039
gb|BG041028.1|BG041028 NXSI_117_G12_F NXSI (Nsf Xylem Side ... 163 1e-039
gb|BE996875.1|BE996875 NXCI_103_F01_F NXCI (Nsf Xylem Compr... 162 2e-039
gb|BF517400.1|BF517400 NXSI_021_A11_F NXSI (Nsf Xylem Side ... 162 2e-039
gb|BQ655915.1|BQ655915 NXRV100_H06_F NXRV (Nsf Xylem Root w... 162 2e-039
gb|BQ702492.1|BQ702492 NXSI_129_C05_F NXSI (Nsf Xylem Side ... 162 2e-039
gb|CF477588.1|CF477588 RTWW3_8_A07.g1_A022 Well-watered lob... 162 2e-039
gb|DR744427.1|DR744427 RTCU1_22_H09.b1_A029 Roots plus adde... 162 2e-039
gb|DR744504.1|DR744504 RTCU1_22_H09.g1_A029 Roots plus adde... 162 2e-039
gb|DR049682.1|DR049682 RTBOR1_18_H05.b1_A029 Roots plus add... 162 2e-039
gb|BF777166.1|BF777166 NXSI_066_A06_F NXSI (Nsf Xylem Side ... 160 6e-039
gb|BX249232.1|BX249232 BX249232 Pinus pinaster differenciat... 160 1e-038
gb|BQ701825.1|BQ701825 NXSI_121_A03_F NXSI (Nsf Xylem Side ... 159 2e-038
gb|BF220795.1|BF220795 NXCI_152_A10_F NXCI (Nsf Xylem Compr... 158 3e-038
gb|AW697938.1|AW697938 NXNV_072_C07_F Nsf Xylem Normal wood... 155 2e-037
gb|BQ702501.1|BQ702501 NXSI_129_D02_F NXSI (Nsf Xylem Side ... 155 3e-037
gb|CF670905.1|CF670905 RTCNT1_53_H03.b1_A029 Root control P... 141 7e-037
gb|BF777301.1|BF777301 NXSI_067_E08_F NXSI (Nsf Xylem Side ... 153 1e-036
gb|BF518051.1|BF518051 NXSI_030_D11_F NXSI (Nsf Xylem Side ... 152 2e-036
gb|AA739705.1|AA739705 470 PtIFG2 Pinus taeda cDNA clone 87... 150 9e-036
gb|AW290283.1|AW290283 NXNV017E08F Nsf Xylem Normal wood Ve... 148 3e-035
gb|BG039983.1|BG039983 NXSI_104_D01_F NXSI (Nsf Xylem Side ... 148 3e-035
gb|CD026919.1|CD026919 NXNV017E08 Nsf Xylem Normal wood Ver... 148 3e-035
gb|BM428399.1|BM428399 NXRV_016_C01_F NXRV (Nsf Xylem Root ... 144 4e-034
gb|BQ698926.1|BQ698926 NXRV117_B11_F NXRV (Nsf Xylem Root w... 141 4e-033
gb|BF778141.1|BF778141 NXSI_077_F05_F NXSI (Nsf Xylem Side ... 140 9e-033
gb|DR742300.1|DR742300 RTCU1_3_D04.b1_A029 Roots plus added... 123 1e-030
gb|CO160294.1|CO160294 FLD1_20_B12.b1_A029 Root flooded Pin... 130 1e-029
gb|CO160371.1|CO160371 FLD1_20_B12.g1_A029 Root flooded Pin... 130 1e-029
gb|AW870197.1|AW870197 NXNV_125_C12_F Nsf Xylem Normal wood... 128 4e-029
gb|BF777288.1|BF777288 NXSI_067_D06_F NXSI (Nsf Xylem Side ... 116 2e-025
gb|BQ699894.1|BQ699894 NXRV131_A11_F NXRV (Nsf Xylem Root w... 112 2e-024
gb|AI919974.1|AI919974 1504 Pine Lambda Zap Xylem library P... 104 7e-022
>gb|AL750053.1|AL750053 AL750053 AS Pinus pinaster cDNA clone AS05C05, mRNA sequence
Length = 696
Score = 169 bits (363), Expect = 2e-041
Identities = 65/80 (81%), Positives = 71/80 (88%)
Frame = +1 / +3
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
A MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EH
Sbjct: 204 ATMGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREH 383
Query: 298 AEARHPKNDLYQCFPHLKN* 357
AEA+HPK D+YQCFPHLK *
Sbjct: 384 AEAKHPKADVYQCFPHLKK* 443
>gb|BX254897.1|BX254897 BX254897 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP107A07, mRNA sequence
Length = 668
Score = 169 bits (363), Expect = 2e-041
Identities = 65/80 (81%), Positives = 71/80 (88%)
Frame = +1 / +3
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
A MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EH
Sbjct: 69 ATMGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREH 248
Query: 298 AEARHPKNDLYQCFPHLKN* 357
AEA+HPK D+YQCFPHLK *
Sbjct: 249 AEAKHPKADVYQCFPHLKK* 308
>gb|BX255469.1|BX255469 BX255469 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP006B07, mRNA sequence
Length = 670
Score = 169 bits (363), Expect = 2e-041
Identities = 65/80 (81%), Positives = 71/80 (88%)
Frame = +1 / +1
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
A MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EH
Sbjct: 226 ATMGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREH 405
Query: 298 AEARHPKNDLYQCFPHLKN* 357
AEA+HPK D+YQCFPHLK *
Sbjct: 406 AEAKHPKADVYQCFPHLKK* 465
>gb|BX683032.1|BX683032 BX683032 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 127C08, mRNA sequence
Length = 664
Score = 169 bits (363), Expect = 2e-041
Identities = 65/80 (81%), Positives = 71/80 (88%)
Frame = +1 / +1
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
A MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EH
Sbjct: 55 ATMGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREH 234
Query: 298 AEARHPKNDLYQCFPHLKN* 357
AEA+HPK D+YQCFPHLK *
Sbjct: 235 AEAKHPKADVYQCFPHLKK* 294
>gb|BX784105.1|BX784105 BX784105 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 129B11, mRNA sequence
Length = 644
Score = 169 bits (363), Expect = 2e-041
Identities = 65/80 (81%), Positives = 71/80 (88%)
Frame = +1 / +3
Query: 118 AAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEH 297
A MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EH
Sbjct: 225 ATMGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREH 404
Query: 298 AEARHPKNDLYQCFPHLKN* 357
AEA+HPK D+YQCFPHLK *
Sbjct: 405 AEAKHPKADVYQCFPHLKK* 464
>gb|BX253341.1|BX253341 BX253341 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP081G03, mRNA sequence
Length = 440
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 6 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 185
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 186 AKHPKADVYQCFPHLKK* 239
>gb|CF395509.1|CF395509 RTDS2_12_E02.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_12_E02_A021 3', mRNA sequence
Length = 562
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 20 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 199
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 200 AKHPKADVYQCFPHLKK* 253
>gb|CF395603.1|CF395603 RTDS2_12_E02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_12_E02_A021 5', mRNA sequence
Length = 763
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 242 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 421
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 422 AKHPKADVYQCFPHLKK* 475
>gb|CF397709.1|CF397709 RTDS3_1_E10.b2_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_1_E10_A022 3', mRNA sequence
Length = 704
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / -3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 567 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 388
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 387 AKHPKADVYQCFPHLKK* 334
>gb|CF670979.1|CF670979 RTCNT1_53_H03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_53_H03_A029 5', mRNA sequence
Length = 728
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 289 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 468
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 469 AKHPKADVYQCFPHLKK* 522
>gb|CO161874.1|CO161874 FLD1_31_F01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_31_F01_A029 5', mRNA sequence
Length = 702
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / -3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 439 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 260
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 259 AKHPKADVYQCFPHLKK* 206
>gb|CO163824.1|CO163824 FLD1_44_B07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_44_B07_A029 3', mRNA sequence
Length = 864
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / -3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 826 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 647
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 646 AKHPKADVYQCFPHLKK* 593
>gb|CO164148.1|CO164148 FLD1_46_D06.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_46_D06_A029 3', mRNA sequence
Length = 815
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 226 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 405
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 406 AKHPKADVYQCFPHLKK* 459
>gb|CO164222.1|CO164222 FLD1_46_D06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_46_D06_A029 5', mRNA sequence
Length = 821
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 213 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 392
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 393 AKHPKADVYQCFPHLKK* 446
>gb|CO165879.1|CO165879 FLD1_57_F05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_57_F05_A029 5', mRNA sequence
Length = 765
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 178 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 357
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 358 AKHPKADVYQCFPHLKK* 411
>gb|CO166083.1|CO166083 FLD1_59_E04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_59_E04_A029 3', mRNA sequence
Length = 729
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 159 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 338
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 339 AKHPKADVYQCFPHLKK* 392
>gb|CO166149.1|CO166149 FLD1_59_E04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_59_E04_A029 5', mRNA sequence
Length = 797
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 214 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 393
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 394 AKHPKADVYQCFPHLKK* 447
>gb|CO170935.1|CO170935 NDL1_17_H11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_17_H11_A029 5', mRNA sequence
Length = 830
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 220 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 399
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 400 AKHPKADVYQCFPHLKK* 453
>gb|CO196919.1|CO196919 GEO1_2_C11.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_2_C11_A029 5', mRNA sequence
Length = 789
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 307 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 486
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 487 AKHPKADVYQCFPHLKK* 540
>gb|DN453025.1|DN453025 EST948824 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIFO48 5' end, mRNA sequence
Length = 822
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 239 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 418
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 419 AKHPKADVYQCFPHLKK* 472
>gb|DN612026.1|DN612026 EST965076 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAB979, mRNA sequence
Length = 681
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 271 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 450
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 451 AKHPKADVYQCFPHLKK* 504
>gb|DN612056.1|DN612056 EST965106 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABA21, mRNA sequence
Length = 684
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 268 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 447
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 448 AKHPKADVYQCFPHLKK* 501
>gb|DN612387.1|DN612387 EST965437 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABE88, mRNA sequence
Length = 684
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 268 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 447
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 448 AKHPKADVYQCFPHLKK* 501
>gb|DN615021.1|DN615021 EST968071 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSACA90, mRNA sequence
Length = 684
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 268 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 447
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 448 AKHPKADVYQCFPHLKK* 501
>gb|DN627086.1|DN627086 EST977902 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAE15, mRNA sequence
Length = 830
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 266 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 445
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 446 AKHPKADVYQCFPHLKK* 499
>gb|DN632932.1|DN632932 EST983748 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACX36, mRNA sequence
Length = 788
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 266 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 445
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 446 AKHPKADVYQCFPHLKK* 499
>gb|DN633401.1|DN633401 EST984217 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAD490, mRNA sequence
Length = 823
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 252 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 431
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 432 AKHPKADVYQCFPHLKK* 485
>gb|DR012626.1|DR012626 HEAT1_14_B09.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_14_B09_A029 3', mRNA sequence
Length = 754
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 184 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 363
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 364 AKHPKADVYQCFPHLKK* 417
>gb|DR012706.1|DR012706 HEAT1_14_B09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_14_B09_A029 5', mRNA sequence
Length = 816
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 346 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 525
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 526 AKHPKADVYQCFPHLKK* 579
>gb|DR013434.1|DR013434 HEAT1_19_G06.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_19_G06_A029 3', mRNA sequence
Length = 704
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 122 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 301
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 302 AKHPKADVYQCFPHLKK* 355
>gb|DR013522.1|DR013522 HEAT1_19_G06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_19_G06_A029 5', mRNA sequence
Length = 681
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 242 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 421
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 422 AKHPKADVYQCFPHLKK* 475
>gb|DR048766.1|DR048766 RTBOR1_11_D03.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_11_D03_A029 3', mRNA sequence
Length = 813
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 116 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 295
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 296 AKHPKADVYQCFPHLKK* 349
>gb|DR048846.1|DR048846 RTBOR1_11_D03.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_11_D03_A029 5', mRNA sequence
Length = 794
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 215 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 394
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 395 AKHPKADVYQCFPHLKK* 448
>gb|DR049543.1|DR049543 RTBOR1_17_H05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_17_H05_A029 3', mRNA sequence
Length = 688
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / -3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 476 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 297
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 296 AKHPKADVYQCFPHLKK* 243
>gb|DR049615.1|DR049615 RTBOR1_17_H05.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_17_H05_A029 5', mRNA sequence
Length = 791
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / -2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 661 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 482
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 481 AKHPKADVYQCFPHLKK* 428
>gb|DR049759.1|DR049759 RTBOR1_18_H05.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_18_H05_A029 5', mRNA sequence
Length = 722
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 218 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 397
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 398 AKHPKADVYQCFPHLKK* 451
>gb|DR055038.1|DR055038 RTCA1_21_D10.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_21_D10_A029 3', mRNA sequence
Length = 737
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 61 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 240
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 241 AKHPKADVYQCFPHLKK* 294
>gb|DR055114.1|DR055114 RTCA1_21_D10.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_21_D10_A029 5', mRNA sequence
Length = 643
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 214 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 393
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 394 AKHPKADVYQCFPHLKK* 447
>gb|DR055813.1|DR055813 RTCA1_26_C08.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_26_C08_A029 3', mRNA sequence
Length = 743
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 199 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 378
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 379 AKHPKADVYQCFPHLKK* 432
>gb|DR056990.1|DR056990 RTNIT1_1_H01.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_1_H01_A029 5', mRNA sequence
Length = 764
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / -3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 558 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 379
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 378 AKHPKADVYQCFPHLKK* 325
>gb|DR089510.1|DR089510 RTAL1_9_D09.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_9_D09_A029 3', mRNA sequence
Length = 772
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 174 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 353
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 354 AKHPKADVYQCFPHLKK* 407
>gb|DR089589.1|DR089589 RTAL1_9_D09.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_9_D09_A029 5', mRNA sequence
Length = 695
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 263 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 442
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 443 AKHPKADVYQCFPHLKK* 496
>gb|DR119458.1|DR119458 RTMG1_23_H07.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_H07_A029 3', mRNA sequence
Length = 725
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 137 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 316
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 317 AKHPKADVYQCFPHLKK* 370
>gb|DR119498.1|DR119498 RTMG1_23_D07.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_D07_A029 5', mRNA sequence
Length = 663
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / -3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 568 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 389
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 388 AKHPKADVYQCFPHLKK* 335
>gb|DR119543.1|DR119543 RTMG1_23_H07.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_H07_A029 5', mRNA sequence
Length = 697
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / +3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 183 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 362
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 363 AKHPKADVYQCFPHLKK* 416
>gb|DR165914.1|DR165914 RTPHOS1_8_D02.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_8_D02_A029 3', mRNA sequence
Length = 817
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / -1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 571 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 392
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 391 AKHPKADVYQCFPHLKK* 338
>gb|DR165992.1|DR165992 RTPHOS1_8_D02.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_8_D02_A029 5', mRNA sequence
Length = 789
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / -1
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 543 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 364
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 363 AKHPKADVYQCFPHLKK* 310
>gb|DR385356.1|DR385356 RTHG1_8_E03.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_E03_A029 3', mRNA sequence
Length = 807
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / -3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 574 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 395
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 394 AKHPKADVYQCFPHLKK* 341
>gb|DR385439.1|DR385439 RTHG1_8_E03.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_E03_A029 5', mRNA sequence
Length = 796
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / -3
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 590 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 411
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 410 AKHPKADVYQCFPHLKK* 357
>gb|DR742745.1|DR742745 RTCU1_6_E09.g2_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_6_E09_A029 5', mRNA sequence
Length = 693
Score = 167 bits (359), Expect = 7e-041
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1 / -2
Query: 124 MGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAE 303
MGGGN QK+KMARE+N EKNK KGSQLE NKKAMNIQCK+CMQTFICTTSE KC+EHAE
Sbjct: 569 MGGGNGQKAKMAREKNIEKNKPSKGSQLETNKKAMNIQCKVCMQTFICTTSEVKCREHAE 390
Query: 304 ARHPKNDLYQCFPHLKN* 357
A+HPK D+YQCFPHLK *
Sbjct: 389 AKHPKADVYQCFPHLKK* 336
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 264,765,897
Number of Sequences: 355925
Number of extensions: 3266903
Number of successful extensions: 45186
Number of sequences better than 1.0e-020: 124
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 8303856210
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)