TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2763110.2.1
(541 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR025238.1|DR025238 STRS1_70_A08.g1_A034 Shoot tip pitch... 171 3e-042
gb|CF390685.1|CF390685 RTDR2_20_D05.g1_A021 Loblolly pine r... 170 6e-042
gb|CF394958.1|CF394958 RTDS2_8_H11.g1_A021 Drought-stressed... 170 6e-042
gb|CV033413.1|CV033413 RTNACL1_34_H08.b1_A029 Roots plus ad... 170 6e-042
gb|CV033500.1|CV033500 RTNACL1_34_H08.g1_A029 Roots plus ad... 170 6e-042
gb|CV036239.1|CV036239 RTNACL1_57_E12.g1_A029 Roots plus ad... 170 6e-042
gb|CV135378.1|CV135378 EST846587 Sequencing ESTs from loblo... 170 6e-042
gb|CX650345.1|CX650345 COLD1_45_C03.b1_A029 Root cold Pinus... 170 6e-042
gb|CX650419.1|CX650419 COLD1_45_C03.g1_A029 Root cold Pinus... 170 6e-042
gb|DR050330.1|DR050330 RTBOR1_22_F04.g1_A029 Roots plus add... 170 6e-042
gb|DR092404.1|DR092404 STRR1_1_E06.b1_A033 Stem Response Re... 170 6e-042
gb|DR092490.1|DR092490 STRR1_1_E06.g1_A033 Stem Response Re... 170 6e-042
gb|DR384838.1|DR384838 RTHG1_4_H10.g1_A029 Roots plus added... 170 6e-042
gb|DR744591.1|DR744591 RTCU1_23_B10.g1_A029 Roots plus adde... 170 6e-042
gb|DT625952.1|DT625952 EST1157876 Sequencing ESTs from lobl... 170 6e-042
gb|DR160246.1|DR160246 RTFE1_4_H05.g1_A029 Roots minus iron... 170 8e-042
gb|CF386135.1|CF386135 RTDR1_8_E10.g1_A015 Loblolly pine ro... 166 8e-041
gb|DR018310.1|DR018310 STRS1_22_B04.b1_A034 Shoot tip pitch... 166 1e-040
gb|DR055722.1|DR055722 RTCA1_25_B07.g1_A029 Roots minus cal... 166 1e-040
gb|CF672051.1|CF672051 RTCNT1_61_B08.b1_A029 Root control P... 164 4e-040
gb|CF667935.1|CF667935 RTCNT1_33_A02.g1_A029 Root control P... 164 5e-040
gb|DR092715.1|DR092715 STRR1_3_G12.b1_A033 Stem Response Re... 164 5e-040
gb|DR093528.1|DR093528 STRR1_8_G01.g1_A033 Stem Response Re... 164 5e-040
gb|DR093538.1|DR093538 STRR1_8_H01.g1_A033 Stem Response Re... 164 5e-040
gb|CF391927.1|CF391927 RTDR3_10_D12.g1_A022 Loblolly pine r... 163 7e-040
gb|CF387703.1|CF387703 RTDR1_19_C11.g1_A015 Loblolly pine r... 163 1e-039
gb|CF671978.1|CF671978 RTCNT1_60_B07.g1_A029 Root control P... 163 1e-039
gb|DR078693.1|DR078693 RTFEPL1_6_F09.b1_A029 Roots plus add... 163 1e-039
gb|CF475538.1|CF475538 RTWW2_12_G10.g1_A021 Well-watered lo... 162 1e-039
gb|BX784158.1|BX784158 BX784158 Pinus pinaster differenciat... 160 5e-039
gb|DR081343.1|DR081343 RTFEPL1_29_B02.b1_A029 Roots plus ad... 160 5e-039
gb|CF402148.1|CF402148 RTWW1_20_B09.g1_A015 Well-watered lo... 160 7e-039
gb|DR010989.1|DR010989 HEAT1_2_D01.g1_A029 Root at 37 C for... 156 8e-038
gb|DR167219.1|DR167219 RTPHOS1_17_A07.g1_A029 Roots minus p... 156 8e-038
gb|DR180240.1|DR180240 RTMNUT1_27_G10.b1_A029 Roots minus m... 156 8e-038
gb|DR386257.1|DR386257 RTHG1_14_A02.b1_A029 Roots plus adde... 156 8e-038
gb|DR387368.1|DR387368 RTHG1_21_F12.b1_A029 Roots plus adde... 156 8e-038
gb|CF388973.1|CF388973 RTDR2_16_D05.g1_A021 Loblolly pine r... 155 2e-037
gb|CF673059.1|CF673059 RTCNT1_75_F06.g1_A029 Root control P... 154 6e-037
gb|CO409263.1|CO409263 EST839648 Sequencing ESTs from loblo... 154 6e-037
gb|DT625597.1|DT625597 EST1157521 Sequencing ESTs from lobl... 154 6e-037
gb|CF400021.1|CF400021 RTWW1_2_F02.g1_A015 Well-watered lob... 153 8e-037
gb|DR080492.1|DR080492 RTFEPL1_23_C05.b1_A029 Roots plus ad... 153 8e-037
gb|DN460749.1|DN460749 EST956548 Sequencing ESTs from loblo... 153 1e-036
gb|DT626855.1|DT626855 EST1159931 Sequencing ESTs from lobl... 153 1e-036
gb|DR058570.1|DR058570 RTNIT1_12_D05.g1_A029 Roots minus ni... 152 1e-036
gb|DR057043.1|DR057043 RTNIT1_2_E01.b1_A029 Roots minus nit... 152 2e-036
gb|CF393317.1|CF393317 RTDR3_20_D09.g1_A022 Loblolly pine r... 87 3e-036
emb|AJ309081.1|PPI309081 Pinus pinaster partial mRNA for pu... 120 8e-036
gb|DR025160.1|DR025160 STRS1_70_A08.b1_A034 Shoot tip pitch... 149 1e-035
gb|CF391187.1|CF391187 RTDR3_4_G12.b1_A022 Loblolly pine ro... 149 1e-035
gb|DR013036.1|DR013036 HEAT1_16_C09.g1_A029 Root at 37 C fo... 149 2e-035
gb|DR384758.1|DR384758 RTHG1_4_H10.b1_A029 Roots plus added... 149 2e-035
gb|CF394868.1|CF394868 RTDS2_8_H11.b1_A021 Drought-stressed... 148 3e-035
gb|CF672122.1|CF672122 RTCNT1_61_B08.g1_A029 Root control P... 148 3e-035
gb|DR092771.1|DR092771 STRR1_3_G12.g1_A033 Stem Response Re... 148 3e-035
gb|DR061097.1|DR061097 RTNIT1_32_C01.b1_A029 Roots minus ni... 148 4e-035
gb|DN448211.1|DN448211 EST944010 Sequencing ESTs from loblo... 147 5e-035
gb|DT624341.1|DT624341 EST1158616 Sequencing ESTs from lobl... 146 1e-034
gb|DR014989.1|DR014989 HEAT1_52_G06.g1_A029 Root at 37 C fo... 95 1e-034
gb|CF672984.1|CF672984 RTCNT1_75_F06.b1_A029 Root control P... 145 2e-034
gb|CX715775.1|CX715775 RTPQ1_36_A08.g1_A032 Roots treated w... 145 2e-034
gb|DR055649.1|DR055649 RTCA1_25_B07.b1_A029 Roots minus cal... 144 3e-034
gb|AW056850.1|AW056850 ST57B04 Pine TriplEx shoot tip libra... 144 4e-034
gb|BX251037.1|BX251037 BX251037 Pinus pinaster differenciat... 144 6e-034
gb|CF387653.1|CF387653 RTDR1_19_D01.b1_A015 Loblolly pine r... 144 6e-034
gb|CF668250.1|CF668250 RTCNT1_35_G09.b1_A029 Root control P... 144 6e-034
gb|CO165209.1|CO165209 FLD1_53_C02.b1_A029 Root flooded Pin... 144 6e-034
gb|CO165284.1|CO165284 FLD1_53_C02.g1_A029 Root flooded Pin... 144 6e-034
gb|CO367196.1|CO367196 RTK1_32_F12.g1_A029 Roots minus pota... 144 6e-034
gb|DR020429.1|DR020429 STRS1_36_H11.g1_A034 Shoot tip pitch... 144 6e-034
gb|DR021239.1|DR021239 STRS1_43_G03.b1_A034 Shoot tip pitch... 144 6e-034
gb|DR049536.1|DR049536 RTBOR1_17_G08.b1_A029 Roots plus add... 144 6e-034
gb|AY064170.1| Pinus taeda p-coumarate 3-hydroxylase mRNA, ... 144 6e-034
gb|AH014262.1|SEG_AY764553S Pinus taeda isolate 30 coumarat... 144 6e-034
gb|AY764554.1|AY764553S2 Pinus taeda isolate 30 coumarate 3... 144 6e-034
gb|AH014263.1|SEG_AY764555S Pinus taeda isolate 14 coumarat... 144 6e-034
gb|AY764556.1|AY764555S2 Pinus taeda isolate 14 coumarate 3... 144 6e-034
gb|AH014264.1|SEG_AY764557S Pinus taeda isolate 3 coumarate... 144 6e-034
gb|AY764558.1|AY764557S2 Pinus taeda isolate 3 coumarate 3-... 144 6e-034
gb|AH014265.1|SEG_AY764559S Pinus taeda isolate 12 coumarat... 144 6e-034
gb|AY764560.1|AY764559S2 Pinus taeda isolate 12 coumarate 3... 144 6e-034
gb|AH014266.1|SEG_AY764561S Pinus taeda isolate 18 coumarat... 144 6e-034
gb|AY764562.1|AY764561S2 Pinus taeda isolate 18 coumarate 3... 144 6e-034
gb|AH014267.1|SEG_AY764563S Pinus taeda isolate 21 coumarat... 144 6e-034
gb|AY764564.1|AY764563S2 Pinus taeda isolate 21 coumarate 3... 144 6e-034
gb|AH014268.1|SEG_AY764565S Pinus taeda isolate 8 coumarate... 144 6e-034
gb|AY764566.1|AY764565S2 Pinus taeda isolate 8 coumarate 3-... 144 6e-034
gb|AH014269.1|SEG_AY764567S Pinus taeda isolate 27 coumarat... 144 6e-034
gb|AY764568.1|AY764567S2 Pinus taeda isolate 27 coumarate 3... 144 6e-034
gb|AH014270.1|SEG_AY764569S Pinus taeda isolate 25 coumarat... 144 6e-034
gb|AY764570.1|AY764569S2 Pinus taeda isolate 25 coumarate 3... 144 6e-034
gb|AH014271.1|SEG_AY764571S Pinus taeda isolate 22 coumarat... 144 6e-034
gb|AY764572.1|AY764571S2 Pinus taeda isolate 22 coumarate 3... 144 6e-034
gb|AH014273.1|SEG_AY764575S Pinus taeda isolate 6 coumarate... 144 6e-034
gb|AY764576.1|AY764575S2 Pinus taeda isolate 6 coumarate 3-... 144 6e-034
gb|AH014274.1|SEG_AY764577S Pinus taeda isolate 10 coumarat... 144 6e-034
gb|AY764578.1|AY764577S2 Pinus taeda isolate 10 coumarate 3... 144 6e-034
gb|AH014275.1|SEG_AY764579S Pinus taeda isolate 11 coumarat... 144 6e-034
gb|AY764580.1|AY764579S2 Pinus taeda isolate 11 coumarate 3... 144 6e-034
gb|AH014276.1|SEG_AY764581S Pinus taeda isolate 26 coumarat... 144 6e-034
gb|AY764582.1|AY764581S2 Pinus taeda isolate 26 coumarate 3... 144 6e-034
gb|AH014277.1|SEG_AY764583S Pinus taeda isolate 4 coumarate... 144 6e-034
gb|AY764584.1|AY764583S2 Pinus taeda isolate 4 coumarate 3-... 144 6e-034
gb|AH014278.1|SEG_AY764585S Pinus taeda isolate 16 coumarat... 144 6e-034
gb|AY764586.1|AY764585S2 Pinus taeda isolate 16 coumarate 3... 144 6e-034
gb|AH014279.1|SEG_AY764587S Pinus taeda isolate 20 coumarat... 144 6e-034
gb|AY764588.1|AY764587S2 Pinus taeda isolate 20 coumarate 3... 144 6e-034
gb|AH014280.1|SEG_AY764589S Pinus taeda isolate 2 coumarate... 144 6e-034
gb|AY764590.1|AY764589S2 Pinus taeda isolate 2 coumarate 3-... 144 6e-034
gb|AH014281.1|SEG_AY764591S Pinus taeda isolate 7 coumarate... 144 6e-034
gb|AY764592.1|AY764591S2 Pinus taeda isolate 7 coumarate 3-... 144 6e-034
gb|AH014282.1|SEG_AY764593S Pinus taeda isolate 19 coumarat... 144 6e-034
gb|AY764594.1|AY764593S2 Pinus taeda isolate 19 coumarate 3... 144 6e-034
gb|AH014283.1|SEG_AY764595S Pinus taeda isolate 32 coumarat... 144 6e-034
gb|AY764596.1|AY764595S2 Pinus taeda isolate 32 coumarate 3... 144 6e-034
gb|AH014284.1|SEG_AY764597S Pinus taeda isolate 15 coumarat... 144 6e-034
gb|AY764598.1|AY764597S2 Pinus taeda isolate 15 coumarate 3... 144 6e-034
gb|AH014285.1|SEG_AY764599S Pinus taeda isolate 17 coumarat... 144 6e-034
gb|AY764600.1|AY764599S2 Pinus taeda isolate 17 coumarate 3... 144 6e-034
gb|AH014286.1|SEG_AY764601S Pinus taeda isolate 31 coumarat... 144 6e-034
gb|AY764602.1|AY764601S2 Pinus taeda isolate 31 coumarate 3... 144 6e-034
gb|AH014287.1|SEG_AY764603S Pinus taeda isolate 28 coumarat... 144 6e-034
gb|AY764604.1|AY764603S2 Pinus taeda isolate 28 coumarate 3... 144 6e-034
gb|AH014288.1|SEG_AY764605S Pinus taeda isolate 1 coumarate... 144 6e-034
gb|AY764606.1|AY764605S2 Pinus taeda isolate 1 coumarate 3-... 144 6e-034
gb|AH014289.1|SEG_AY764607S Pinus taeda isolate 24 coumarat... 144 6e-034
gb|AY764608.1|AY764607S2 Pinus taeda isolate 24 coumarate 3... 144 6e-034
gb|AH014272.1|SEG_AY764573S Pinus taeda isolate 9 coumarate... 143 8e-034
gb|AY764574.1|AY764573S2 Pinus taeda isolate 9 coumarate 3-... 143 8e-034
gb|CO364319.1|CO364319 RTK1_15_B05.b1_A029 Roots minus pota... 143 1e-033
gb|CX652892.1|CX652892 COLD1_62_D09.b1_A029 Root cold Pinus... 86 2e-033
gb|DR093440.1|DR093440 STRR1_8_G01.b1_A033 Stem Response Re... 142 2e-033
gb|CO174545.1|CO174545 NDL1_44_D12.g1_A029 Needles control ... 141 3e-033
gb|DR012987.1|DR012987 HEAT1_16_G02.b1_A029 Root at 37 C fo... 141 3e-033
gb|CF387731.1|CF387731 RTDR1_19_E03.g1_A015 Loblolly pine r... 141 4e-033
gb|CF400732.1|CF400732 RTWW1_7_F09.g1_A015 Well-watered lob... 141 4e-033
gb|CF401062.1|CF401062 RTWW1_9_D04.g1_A015 Well-watered lob... 141 4e-033
gb|CF401174.1|CF401174 RTWW1_10_G11.g1_A015 Well-watered lo... 141 4e-033
gb|CF664833.1|CF664833 RTCNT1_12_E12.b1_A029 Root control P... 141 4e-033
gb|CO164846.1|CO164846 FLD1_50_E03.g1_A029 Root flooded Pin... 141 4e-033
gb|CO168990.1|CO168990 NDL1_3_H10.g1_A029 Needles control P... 141 4e-033
gb|CO169531.1|CO169531 NDL1_7_E03.g1_A029 Needles control P... 141 4e-033
gb|CO174864.1|CO174864 NDL1_46_F08.g1_A029 Needles control ... 141 4e-033
gb|CO361705.1|CO361705 NDL2_6_B10.g1_A029 Needles control 2... 141 4e-033
gb|CO364401.1|CO364401 RTK1_15_B05.g1_A029 Roots minus pota... 141 4e-033
gb|CV031482.1|CV031482 RTNACL1_1_G10.g1_A029 Roots plus add... 141 4e-033
gb|DR025052.1|DR025052 STRS1_69_G01.b1_A034 Shoot tip pitch... 141 4e-033
gb|DR095294.1|DR095294 STRR1_20_D03.b1_A033 Stem Response R... 141 4e-033
gb|DR097478.1|DR097478 STRR1_34_H04.g3_A033 Stem Response R... 141 4e-033
gb|DR097817.1|DR097817 STRR1_37_E11.b1_A033 Stem Response R... 141 4e-033
gb|DR097889.1|DR097889 STRR1_37_E11.g1_A033 Stem Response R... 141 4e-033
gb|DR098494.1|DR098494 STRR1_45_H01.g1_A033 Stem Response R... 141 4e-033
gb|DR101460.1|DR101460 STRR1_73_F06.b1_A033 Stem Response R... 141 4e-033
gb|DR118697.1|DR118697 RTMG1_18_D07.g1_A029 Roots minus mag... 141 4e-033
gb|DR385802.1|DR385802 RTHG1_11_A09.b1_A029 Roots plus adde... 141 4e-033
gb|DR011089.1|DR011089 HEAT1_3_H03.b1_A029 Root at 37 C for... 85 6e-033
gb|CO201161.1|CO201161 RTCNT2_4_B05.b1_A029 Root control 2 ... 85 6e-033
gb|CF389444.1|CF389444 RTDR2_7_F07.g1_A021 Loblolly pine ro... 140 6e-033
gb|DR057693.1|DR057693 RTNIT1_7_F09.b1_A029 Roots minus nit... 85 1e-032
gb|DR071932.1|DR071932 RTDK1_23_B01.b1_A029 Roots, dark Pin... 85 1e-032
gb|DR060345.1|DR060345 RTNIT1_27_F06.b1_A029 Roots minus ni... 85 1e-032
gb|CF671705.1|CF671705 RTCNT1_58_F05.g1_A029 Root control P... 85 1e-032
gb|CO364701.1|CO364701 RTK1_21_F12.b1_A029 Roots minus pota... 83 2e-032
gb|CF475076.1|CF475076 RTWW2_5_H06.g1_A021 Well-watered lob... 138 2e-032
gb|CF475411.1|CF475411 RTWW2_13_H03.g1_A021 Well-watered lo... 138 2e-032
gb|CO169355.1|CO169355 NDL1_6_B06.g1_A029 Needles control P... 138 2e-032
gb|DR069451.1|DR069451 RTDK1_7_H01.b1_A029 Roots, dark Pinu... 138 2e-032
gb|CF667857.1|CF667857 RTCNT1_33_A02.b1_A029 Root control P... 138 3e-032
gb|DR018207.1|DR018207 STRS1_21_D10.b1_A034 Shoot tip pitch... 138 3e-032
gb|CO364543.1|CO364543 RTK1_16_G09.b1_A029 Roots minus pota... 80 5e-032
gb|CF663159.1|CF663159 RTCNT1_1_D07.b1_A029 Root control Pi... 137 5e-032
gb|CF665533.1|CF665533 RTCNT1_16_C12.g1_A029 Root control P... 137 5e-032
gb|CO172329.1|CO172329 NDL1_29_B08.b1_A029 Needles control ... 137 5e-032
gb|CO172721.1|CO172721 NDL1_31_B02.g1_A029 Needles control ... 137 5e-032
gb|CO172737.1|CO172737 NDL1_31_C06.g1_A029 Needles control ... 137 5e-032
gb|CO174050.1|CO174050 NDL1_41_H10.b1_A029 Needles control ... 137 5e-032
gb|CO174135.1|CO174135 NDL1_41_H10.g1_A029 Needles control ... 137 5e-032
gb|CX648229.1|CX648229 COLD1_27_G12.b1_A029 Root cold Pinus... 137 5e-032
gb|CX648961.1|CX648961 COLD1_32_B12.b1_A029 Root cold Pinus... 137 5e-032
gb|DR054235.1|DR054235 RTCA1_16_C02.b1_A029 Roots minus cal... 137 5e-032
gb|DR068937.1|DR068937 RTDK1_3_F08.g1_A029 Roots, dark Pinu... 137 5e-032
gb|DR070752.1|DR070752 RTDK1_15_H03.b1_A029 Roots, dark Pin... 137 5e-032
gb|DR070829.1|DR070829 RTDK1_15_H03.g1_A029 Roots, dark Pin... 137 5e-032
gb|DR745282.1|DR745282 RTCU1_28_F12.b1_A029 Roots plus adde... 137 5e-032
gb|DR054821.1|DR054821 RTCA1_19_F07.g1_A029 Roots minus cal... 80 7e-032
gb|DR388754.1|DR388754 RTHG1_30_F11.b1_A029 Roots plus adde... 80 7e-032
gb|DR096014.1|DR096014 STRR1_25_E02.b1_A033 Stem Response R... 80 7e-032
gb|CF387452.1|CF387452 RTDR1_20_E06.b1_A015 Loblolly pine r... 121 7e-032
gb|CF386061.1|CF386061 RTDR1_8_D11.b1_A015 Loblolly pine ro... 136 1e-031
gb|CF386988.1|CF386988 RTDR1_10_G08.b1_A015 Loblolly pine r... 136 1e-031
gb|CF387701.1|CF387701 RTDR1_19_D06.g1_A015 Loblolly pine r... 136 1e-031
gb|CF400183.1|CF400183 RTWW1_3_G10.g1_A015 Well-watered lob... 136 1e-031
gb|CF472528.1|CF472528 RTDS1_10_F12.b1_A015 Drought-stresse... 136 1e-031
gb|CO174468.1|CO174468 NDL1_44_E05.b1_A029 Needles control ... 136 1e-031
gb|CO200490.1|CO200490 GEO2_7_F10.g1_A032 Root gravitropism... 136 1e-031
gb|DR097975.1|DR097975 STRR1_38_G01.b1_A033 Stem Response R... 136 1e-031
gb|CX651079.1|CX651079 COLD1_50_B01.b1_A029 Root cold Pinus... 85 1e-031
gb|CO200190.1|CO200190 GEO2_6_A07.b1_A032 Root gravitropism... 79 2e-031
gb|CF667376.1|CF667376 RTCNT1_29_G09.g1_A029 Root control P... 80 2e-031
gb|DR387487.1|DR387487 RTHG1_22_D03.b1_A029 Roots plus adde... 80 2e-031
gb|DR023807.1|DR023807 STRS1_60_E04.b1_A034 Shoot tip pitch... 80 2e-031
gb|CO197738.1|CO197738 GEO1_8_E11.g1_A029 Root gravitropism... 80 2e-031
gb|DR112756.1|DR112756 RTS1_30_H04.b1_A029 Roots minus sulf... 80 2e-031
gb|DR052240.1|DR052240 RTCA1_3_G07.b1_A029 Roots minus calc... 83 2e-031
gb|DR052314.1|DR052314 RTCA1_3_G07.g1_A029 Roots minus calc... 83 2e-031
gb|CF673013.1|CF673013 RTCNT1_75_A10.g1_A029 Root control P... 135 3e-031
gb|CV036172.1|CV036172 RTNACL1_57_E12.b1_A029 Roots plus ad... 135 3e-031
gb|DR070550.1|DR070550 RTDK1_14_B09.b1_A029 Roots, dark Pin... 129 3e-031
gb|DR070616.1|DR070616 RTDK1_14_B09.g1_A029 Roots, dark Pin... 129 3e-031
gb|DR742401.1|DR742401 RTCU1_3_F08.g2_A029 Roots plus added... 84 8e-031
gb|DR165380.1|DR165380 RTPHOS1_4_D09.g1_A029 Roots minus ph... 85 8e-031
gb|CF400152.1|CF400152 RTWW1_3_F10.g1_A015 Well-watered lob... 133 9e-031
gb|CO366390.1|CO366390 RTK1_27_C09.g1_A029 Roots minus pota... 80 1e-030
gb|CO361634.1|CO361634 NDL2_6_B10.b1_A029 Needles control 2... 133 1e-030
gb|DR178348.1|DR178348 RTMNUT1_11_E04.b1_A029 Roots minus m... 79 2e-030
gb|CF664646.1|CF664646 RTCNT1_11_D06.b1_A029 Root control P... 124 2e-030
gb|DR100593.1|DR100593 STRR1_65_G06.b1_A033 Stem Response R... 132 2e-030
gb|CF401877.1|CF401877 RTWW1_15_F04.g1_A015 Well-watered lo... 131 4e-030
gb|CO169714.1|CO169714 NDL1_9_C07.b1_A029 Needles control P... 130 6e-030
gb|DR095249.1|DR095249 STRR1_19_F08.g1_A033 Stem Response R... 78 8e-030
gb|DR744506.1|DR744506 RTCU1_22_H11.g1_A029 Roots plus adde... 130 8e-030
gb|DN631023.1|DN631023 EST981839 Subtracted pine embryo lib... 129 1e-029
gb|CF477023.1|CF477023 RTWW3_5_H04.b1_A022 Well-watered lob... 129 2e-029
gb|CF474754.1|CF474754 RTWW2_7_F02.g1_A021 Well-watered lob... 128 2e-029
gb|CO367116.1|CO367116 RTK1_32_F12.b1_A029 Roots minus pota... 128 2e-029
gb|CO197246.1|CO197246 GEO1_4_H06.g1_A029 Root gravitropism... 74 3e-029
gb|DR051877.1|DR051877 RTCA1_1_B05.b1_A029 Roots minus calc... 128 3e-029
gb|CF402644.1|CF402644 RTWW1_21_C02.g1_A015 Well-watered lo... 127 4e-029
gb|CO362627.1|CO362627 RTK1_4_F08.g1_A029 Roots minus potas... 127 4e-029
gb|CV134497.1|CV134497 EST845706 Sequencing ESTs from loblo... 126 1e-028
gb|DR020357.1|DR020357 STRS1_36_H11.b1_A034 Shoot tip pitch... 126 1e-028
gb|BX677300.1|BX677300 BX677300 RN Pinus pinaster cDNA clon... 87 1e-028
gb|DR167142.1|DR167142 RTPHOS1_17_A07.b1_A029 Roots minus p... 126 1e-028
gb|CF402294.1|CF402294 RTWW1_19_C09.g1_A015 Well-watered lo... 125 2e-028
gb|DR018269.1|DR018269 STRS1_21_D10.g1_A034 Shoot tip pitch... 125 2e-028
gb|CF402134.1|CF402134 RTWW1_20_E05.g1_A015 Well-watered lo... 125 3e-028
gb|CF665452.1|CF665452 RTCNT1_16_C12.b1_A029 Root control P... 124 4e-028
gb|CV033403.1|CV033403 RTNACL1_34_G06.b1_A029 Roots plus ad... 124 5e-028
gb|DR071444.1|DR071444 RTDK1_19_H10.g1_A029 Roots, dark Pin... 79 6e-028
gb|DR168201.1|DR168201 RTPHOS1_23_G09.g1_A029 Roots minus p... 79 6e-028
gb|CF388779.1|CF388779 RTDR2_15_C04.g1_A021 Loblolly pine r... 123 7e-028
gb|DR020783.1|DR020783 STRS1_39_F10.b1_A034 Shoot tip pitch... 123 7e-028
gb|DR102363.1|DR102363 STRR1_80_C06.g1_A033 Stem Response R... 123 7e-028
gb|DR683159.1|DR683159 EST1073235 Normalized pine embryo li... 123 7e-028
gb|CF386671.1|CF386671 RTDR1_16_G09.b1_A015 Loblolly pine r... 123 1e-027
gb|CF399940.1|CF399940 RTWW1_2_F02.b1_A015 Well-watered lob... 123 1e-027
gb|CF400956.1|CF400956 RTWW1_9_D04.b1_A015 Well-watered lob... 123 1e-027
gb|CO168908.1|CO168908 NDL1_3_H10.b1_A029 Needles control P... 123 1e-027
gb|CO169454.1|CO169454 NDL1_7_E03.b1_A029 Needles control P... 123 1e-027
gb|CO174785.1|CO174785 NDL1_46_F08.b1_A029 Needles control ... 123 1e-027
gb|DR098417.1|DR098417 STRR1_45_H01.b1_A033 Stem Response R... 123 1e-027
gb|CF671620.1|CF671620 RTCNT1_58_F05.b1_A029 Root control P... 85 1e-027
gb|CX714791.1|CX714791 RTPQ1_27_A05.b1_A032 Roots treated w... 80 2e-027
gb|DR056207.1|DR056207 RTCA1_28_F07.g1_A029 Roots minus cal... 83 2e-027
gb|DR020400.1|DR020400 STRS1_36_E04.g1_A034 Shoot tip pitch... 80 3e-027
gb|DR167797.1|DR167797 RTPHOS1_21_D07.b1_A029 Roots minus p... 75 3e-027
gb|CF389336.1|CF389336 RTDR2_7_F07.b1_A021 Loblolly pine ro... 121 5e-027
gb|DR012954.1|DR012954 HEAT1_16_C09.b1_A029 Root at 37 C fo... 120 7e-027
gb|CF667480.1|CF667480 RTCNT1_30_C05.g1_A029 Root control P... 120 9e-027
gb|DR091012.1|DR091012 RTAL1_18_G08.g1_A029 Roots plus adde... 120 9e-027
gb|DR743154.1|DR743154 RTCU1_13_H10.g1_A029 Roots plus adde... 120 9e-027
gb|CO363027.1|CO363027 RTK1_7_E06.b1_A029 Roots minus potas... 75 1e-026
gb|CF392494.1|CF392494 RTDR3_6_A11.b1_A022 Loblolly pine ro... 119 1e-026
gb|DR068849.1|DR068849 RTDK1_3_F08.b1_A029 Roots, dark Pinu... 119 1e-026
gb|CF670095.1|CF670095 RTCNT1_48_C02.b1_A029 Root control P... 119 2e-026
gb|DR016489.1|DR016489 STRS1_10_A05.g1_A034 Shoot tip pitch... 119 2e-026
gb|CF385478.1|CF385478 RTDR1_4_A12.b1_A015 Loblolly pine ro... 118 2e-026
gb|CF400218.1|CF400218 RTWW1_4_C08.b1_A015 Well-watered lob... 118 2e-026
gb|DR386566.1|DR386566 RTHG1_16_C01.b1_A029 Roots plus adde... 79 3e-026
gb|CO198830.1|CO198830 GEO1_16_H07.g1_A029 Root gravitropis... 79 3e-026
gb|CO200805.1|CO200805 RTCNT2_1_E03.g1_A029 Root control 2 ... 118 3e-026
gb|DR048144.1|DR048144 RTBOR1_6_H01.g2_A029 Roots plus adde... 79 4e-026
gb|DR165315.1|DR165315 RTPHOS1_4_D09.b1_A029 Roots minus ph... 70 4e-026
gb|CO169779.1|CO169779 NDL1_9_C07.g1_A029 Needles control P... 117 4e-026
gb|CV036149.1|CV036149 RTNACL1_57_C01.b1_A029 Roots plus ad... 89 5e-026
gb|CF388558.1|CF388558 RTDR2_4_A08.b1_A021 Loblolly pine ro... 89 5e-026
gb|DR178817.1|DR178817 RTMNUT1_14_E03.b1_A029 Roots minus m... 83 5e-026
gb|DR178900.1|DR178900 RTMNUT1_14_E03.g1_A029 Roots minus m... 83 5e-026
gb|CV033215.1|CV033215 RTNACL1_33_C10.b1_A029 Roots plus ad... 70 7e-026
gb|CO198705.1|CO198705 GEO1_15_H05.g1_A029 Root gravitropis... 85 9e-026
gb|CF671186.1|CF671186 RTCNT1_55_G12.b1_A029 Root control P... 68 1e-025
gb|CO362909.1|CO362909 RTK1_6_B06.g1_A029 Roots minus potas... 77 2e-025
gb|CO362830.1|CO362830 RTK1_6_B06.b1_A029 Roots minus potas... 77 2e-025
gb|CF478418.1|CF478418 RTWW3_20_D10.b1_A022 Well-watered lo... 114 4e-025
gb|DR100157.1|DR100157 STRR1_62_D05.b1_A033 Stem Response R... 113 1e-024
gb|DR163418.1|DR163418 RTFE1_42_G03.g1_A029 Roots minus iro... 113 1e-024
gb|DR056127.1|DR056127 RTCA1_28_F07.b1_A029 Roots minus cal... 82 2e-024
gb|CF397949.1|CF397949 RTDS3_23_A09.g1_A022 Drought-stresse... 68 2e-024
gb|CF402117.1|CF402117 RTWW1_20_E05.b1_A015 Well-watered lo... 111 3e-024
gb|DR012833.1|DR012833 HEAT1_15_F12.b1_A029 Root at 37 C fo... 75 3e-024
gb|CO164768.1|CO164768 FLD1_50_E03.b1_A029 Root flooded Pin... 111 5e-024
gb|CO198262.1|CO198262 GEO1_12_A07.g1_A029 Root gravitropis... 111 5e-024
gb|CF402097.1|CF402097 RTWW1_20_B09.b1_A015 Well-watered lo... 110 7e-024
gb|CO168738.1|CO168738 NDL1_2_E05.b1_A029 Needles control P... 70 1e-023
gb|DR071095.1|DR071095 RTDK1_17_C10.g1_A029 Roots, dark Pin... 71 1e-023
gb|CF386892.1|CF386892 RTDR1_9_D05.g1_A015 Loblolly pine ro... 109 2e-023
gb|CF400297.1|CF400297 RTWW1_4_C08.g1_A015 Well-watered lob... 109 2e-023
gb|DR091083.1|DR091083 RTAL1_19_F12.b1_A029 Roots plus adde... 80 2e-023
gb|CO172749.1|CO172749 NDL1_31_D07.g1_A029 Needles control ... 108 3e-023
gb|DR744765.1|DR744765 RTCU1_24_F04.g1_A029 Roots plus adde... 108 3e-023
gb|DR071240.1|DR071240 RTDK1_18_C09.g1_A029 Roots, dark Pin... 71 3e-023
gb|CO360932.1|CO360932 NDL2_1_B10.g1_A029 Needles control 2... 71 4e-023
gb|CF664373.1|CF664373 RTCNT1_9_H07.b1_A029 Root control Pi... 70 4e-023
gb|BX677655.1|BX677655 BX677655 RN Pinus pinaster cDNA clon... 75 5e-023
gb|CF391339.1|CF391339 RTDR3_1_C03.b1_A022 Loblolly pine ro... 75 5e-023
gb|DR387552.1|DR387552 RTHG1_22_D03.g2_A029 Roots plus adde... 75 9e-023
gb|BQ697614.1|BQ697614 NXPV_058_G01_F NXPV (Nsf Xylem Plani... 106 9e-023
gb|CF385785.1|CF385785 RTDR1_6_F10.b1_A015 Loblolly pine ro... 106 9e-023
gb|CF386336.1|CF386336 RTDR1_13_F10.g1_A015 Loblolly pine r... 106 9e-023
gb|CF663284.1|CF663284 RTCNT1_2_A01.b1_A029 Root control Pi... 106 9e-023
gb|CO163057.1|CO163057 FLD1_39_E06.b1_A029 Root flooded Pin... 106 9e-023
gb|CO197706.1|CO197706 GEO1_8_A09.g1_A029 Root gravitropism... 75 1e-022
gb|CF396771.1|CF396771 RTDS2_24_H10.b1_A021 Drought-stresse... 106 1e-022
gb|DR053787.1|DR053787 RTCA1_13_H01.b1_A029 Roots minus cal... 106 1e-022
gb|CX646046.1|CX646046 COLD1_7_A05.b1_A029 Root cold Pinus ... 77 2e-022
gb|AL750799.1|AL750799 AL750799 RN Pinus pinaster cDNA clon... 87 3e-022
gb|CF470768.1|CF470768 RTDS1_14_E07.g1_A015 Drought-stresse... 78 6e-022
gb|CF471554.1|CF471554 RTDS1_4_H06.b1_A015 Drought-stressed... 78 6e-022
gb|CF470703.1|CF470703 RTDS1_14_E07.b1_A015 Drought-stresse... 78 6e-022
gb|CO369661.1|CO369661 RTK1_48_D04.g1_A029 Roots minus pota... 62 6e-022
gb|CF663543.1|CF663543 RTCNT1_3_B11.g1_A029 Root control Pi... 68 8e-022
gb|CF671128.1|CF671128 RTCNT1_54_H10.g1_A029 Root control P... 68 8e-022
gb|DR058580.1|DR058580 RTNIT1_12_E03.g1_A029 Roots minus ni... 68 8e-022
gb|DR159956.1|DR159956 RTFE1_2_F02.g1_A029 Roots minus iron... 68 8e-022
gb|CF670928.1|CF670928 RTCNT1_53_B09.g1_A029 Root control P... 68 8e-022
gb|DT633355.1|DT633355 EST1148286 Normalized pine embryo li... 87 1e-021
gb|CO369230.1|CO369230 RTK1_45_F11.g1_A029 Roots minus pota... 89 1e-021
gb|DR686267.1|DR686267 EST1076345 Normalized pine embryo li... 87 1e-021
gb|DR021038.1|DR021038 STRS1_42_A04.b1_A034 Shoot tip pitch... 75 1e-021
gb|CF390534.1|CF390534 RTDR2_20_D05.b1_A021 Loblolly pine r... 103 1e-021
gb|DR090934.1|DR090934 RTAL1_18_G08.b1_A029 Roots plus adde... 102 2e-021
gb|CO367761.1|CO367761 RTK1_36_A08.g1_A029 Roots minus pota... 66 2e-021
gb|CO367760.1|CO367760 RTK1_36_A07.g1_A029 Roots minus pota... 66 2e-021
gb|CV033140.1|CV033140 RTNACL1_20_D03.g1_A029 Roots plus ad... 70 2e-021
dbj|BD224508.1| Materials and methods for the modification ... 101 3e-021
gb|AW870094.1|AW870094 NXNV_124_A07_F Nsf Xylem Normal wood... 101 4e-021
gb|CF670854.1|CF670854 RTCNT1_53_B09.b1_A029 Root control P... 66 5e-021
gb|CF474293.1|CF474293 RTWW2_20_F09.b1_A021 Well-watered lo... 67 7e-021
gb|CO166660.1|CO166660 FLD1_63_C11.g1_A029 Root flooded Pin... 100 8e-021
gb|DR178365.1|DR178365 RTMNUT1_11_G01.b1_A029 Roots minus m... 71 1e-020
gb|DR178527.1|DR178527 RTMNUT1_12_H01.b1_A029 Roots minus m... 71 1e-020
gb|CN784131.1|CN784131 EST782822 Sequencing ESTs from loblo... 62 1e-020
gb|DR178250.1|DR178250 RTMNUT1_10_H01.b1_A029 Roots minus m... 71 1e-020
gb|DR178447.1|DR178447 RTMNUT1_11_G01.g1_A029 Roots minus m... 71 1e-020
>gb|DR025238.1|DR025238 STRS1_70_A08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_70_A08_A034 5', mRNA sequence
Length = 727
Score = 171 bits (368), Expect = 3e-042
Identities = 64/142 (45%), Positives = 87/142 (61%)
Frame = +2 / +1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 283 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 462
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 463 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 642
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K+VPL P+ R+
Sbjct: 643 AEAYGLTLQKVVPLLAAPVARL 708
>gb|CF390685.1|CF390685 RTDR2_20_D05.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_20_D05_A021 5', mRNA
sequence
Length = 740
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / +1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 304 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 483
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 484 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 663
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 664 AEAYGLTLQKAVPLLAAPVARL 729
>gb|CF394958.1|CF394958 RTDS2_8_H11.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_8_H11_A021 5', mRNA sequence
Length = 726
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / +1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 289 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 468
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 469 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 648
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 649 AEAYGLTLQKAVPLLAAPVARL 714
>gb|CV033413.1|CV033413 RTNACL1_34_H08.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_34_H08_A029 3', mRNA sequence
Length = 798
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 107 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 286
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 287 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 466
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 467 AEAYGLTLQKAVPLLAAPVARL 532
>gb|CV033500.1|CV033500 RTNACL1_34_H08.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_34_H08_A029 5', mRNA sequence
Length = 667
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / +1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 112 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 291
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 292 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 471
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 472 AEAYGLTLQKAVPLLAAPVARL 537
>gb|CV036239.1|CV036239 RTNACL1_57_E12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_57_E12_A029 5', mRNA sequence
Length = 713
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / +3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 255 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 434
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 435 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 614
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 615 AEAYGLTLQKAVPLLAAPVARL 680
>gb|CV135378.1|CV135378 EST846587 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PICMB24 5' end, mRNA sequence
Length = 871
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 62 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 241
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 242 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 421
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 422 AEAYGLTLQKAVPLLAAPVARL 487
>gb|CX650345.1|CX650345 COLD1_45_C03.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_C03_A029 3', mRNA sequence
Length = 741
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / -1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 645 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 466
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 465 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 286
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 285 AEAYGLTLQKAVPLLAAPVARL 220
>gb|CX650419.1|CX650419 COLD1_45_C03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_C03_A029 5', mRNA sequence
Length = 843
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / -1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 801 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 622
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 621 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 442
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 441 AEAYGLTLQKAVPLLAAPVARL 376
>gb|DR050330.1|DR050330 RTBOR1_22_F04.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_22_F04_A029 5', mRNA sequence
Length = 796
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 356 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 535
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 536 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 715
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 716 AEAYGLTLQKAVPLLAAPVARL 781
>gb|DR092404.1|DR092404 STRR1_1_E06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_E06_A033 3', mRNA sequence
Length = 933
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 248 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 427
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 428 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 607
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 608 AEAYGLTLQKAVPLLAAPVARL 673
>gb|DR092490.1|DR092490 STRR1_1_E06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_E06_A033 5', mRNA sequence
Length = 860
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / +1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 355 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 534
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 535 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 714
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 715 AEAYGLTLQKAVPLLAAPVARL 780
>gb|DR384838.1|DR384838 RTHG1_4_H10.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_4_H10_A029 5', mRNA sequence
Length = 723
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / +3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 81 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 260
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 261 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 440
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 441 AEAYGLTLQKAVPLLAAPVARL 506
>gb|DR744591.1|DR744591 RTCU1_23_B10.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_B10_A029 5', mRNA sequence
Length = 795
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / -3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 742 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 563
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 562 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 383
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 382 AEAYGLTLQKAVPLLAAPVARL 317
>gb|DT625952.1|DT625952 EST1157876 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA548 5' end, mRNA sequence
Length = 876
Score = 170 bits (366), Expect = 6e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 62 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 241
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 242 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 421
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 422 AEAYGLTLQKAVPLLAAPVARL 487
>gb|DR160246.1|DR160246 RTFE1_4_H05.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_4_H05_A029 5', mRNA sequence
Length = 768
Score = 170 bits (365), Expect = 8e-042
Identities = 64/142 (45%), Positives = 86/142 (60%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 647 KETFRLHPSTPLLMPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 468
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 467 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 288
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 287 AEAYGLTLQKAVPLLAAPVARL 222
>gb|CF386135.1|CF386135 RTDR1_8_E10.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_8_E10_A015 5', mRNA
sequence
Length = 649
Score = 166 bits (358), Expect = 8e-041
Identities = 63/142 (44%), Positives = 85/142 (59%)
Frame = +2 / +1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 148 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 327
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H DW LPEG + E++DM
Sbjct: 328 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSCDWSLPEGQLPENLDM 507
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 508 AEAYGLTLQKAVPLLAAPVARL 573
>gb|DR018310.1|DR018310 STRS1_22_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_22_B04_A034 3', mRNA sequence
Length = 854
Score = 166 bits (357), Expect = 1e-040
Identities = 65/142 (45%), Positives = 85/142 (59%)
Frame = +2 / +1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP LL+PR T+ +C I GY + R+ VN W M RDP +W+RP EF P+RF
Sbjct: 178 KETLRLHPSVPLLVPRMTVEACEIKGYYIPKNARVMVNAWGMQRDPGVWERPLEFDPDRF 357
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RGS F+L+PFG+GRR C ++MG H FD LP G V + +DM
Sbjct: 358 IGSSVDVRGSDFQLIPFGAGRRICAGMSMGIRMVQLMLATLVHSFDLSLPNGQVPQTLDM 537
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E+ L RK PL +VP R+
Sbjct: 538 AESSGLTMRKAEPLLVVPAARI 603
>gb|DR055722.1|DR055722 RTCA1_25_B07.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_25_B07_A029 5', mRNA sequence
Length = 691
Score = 166 bits (357), Expect = 1e-040
Identities = 63/142 (44%), Positives = 85/142 (59%)
Frame = +2 / +3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 195 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 374
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PF +GRR C ++MG H FDW LPEG + E++DM
Sbjct: 375 AGSAVDVRGTDFEVIPFCAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 554
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 555 AEAYGLTLQKAVPLLAAPVARL 620
>gb|CF672051.1|CF672051 RTCNT1_61_B08.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_61_B08_A029 3', mRNA sequence
Length = 760
Score = 164 bits (353), Expect = 4e-040
Identities = 60/142 (42%), Positives = 86/142 (60%)
Frame = +2 / -2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HPP LLIP SC + GY + T++ VN WA+GRDP+IWD P +F PERF
Sbjct: 531 KETFRLHPPAPLLIPHRAESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERF 352
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
S +++RG +FEL+PFG+GRR CP + + H F+W LP+G+ + +DM
Sbjct: 351 VESEMEYRGQNFELIPFGAGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDM 172
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E + ++ PL VP R+
Sbjct: 171 SERFGITLQRASPLIAVPSLRL 106
>gb|CF667935.1|CF667935 RTCNT1_33_A02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_33_A02_A029 5', mRNA sequence
Length = 740
Score = 164 bits (352), Expect = 5e-040
Identities = 59/142 (41%), Positives = 86/142 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HPP LLIP SC + GY + T++ VN WA+GRDP+IWD P +F PERF
Sbjct: 266 KETFRLHPPAPLLIPHRAESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERF 445
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
S +++RG +FEL+PFG+GRR CP + + H F+W LP+G+ + +DM
Sbjct: 446 VESEMEYRGQNFELIPFGAGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDM 625
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E + ++ PL +P R+
Sbjct: 626 SERFGITLQRASPLIAIPSLRL 691
>gb|DR092715.1|DR092715 STRR1_3_G12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_3_G12_A033 3', mRNA sequence
Length = 818
Score = 164 bits (352), Expect = 5e-040
Identities = 59/142 (41%), Positives = 86/142 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HPP LLIP SC + GY + T++ VN WA+GRDP+IWD P +F PERF
Sbjct: 14 KETFRLHPPAPLLIPHRAESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERF 193
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
S +++RG +FEL+PFG+GRR CP + + H F+W LP+G+ + +DM
Sbjct: 194 VESEMEYRGQNFELIPFGAGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDM 373
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E + ++ PL +P R+
Sbjct: 374 SERFGITLQRASPLIAIPSLRL 439
>gb|DR093528.1|DR093528 STRR1_8_G01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_G01_A033 5', mRNA sequence
Length = 902
Score = 164 bits (352), Expect = 5e-040
Identities = 59/142 (41%), Positives = 86/142 (60%)
Frame = +2 / +3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HPP LLIP SC + GY + T++ VN WA+GRDP+IWD P +F PERF
Sbjct: 243 KETFRLHPPAPLLIPHRAESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERF 422
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
S +++RG +FEL+PFG+GRR CP + + H F+W LP+G+ + +DM
Sbjct: 423 VESEMEYRGQNFELIPFGAGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDM 602
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E + ++ PL +P R+
Sbjct: 603 SERFGITLQRASPLIAIPSLRL 668
>gb|DR093538.1|DR093538 STRR1_8_H01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_H01_A033 5', mRNA sequence
Length = 866
Score = 164 bits (352), Expect = 5e-040
Identities = 59/142 (41%), Positives = 86/142 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HPP LLIP SC + GY + T++ VN WA+GRDP+IWD P +F PERF
Sbjct: 227 KETFRLHPPAPLLIPHRAESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERF 406
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
S +++RG +FEL+PFG+GRR CP + + H F+W LP+G+ + +DM
Sbjct: 407 VESEMEYRGQNFELIPFGAGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDM 586
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E + ++ PL +P R+
Sbjct: 587 SERFGITLQRASPLIAIPSLRL 652
>gb|CF391927.1|CF391927 RTDR3_10_D12.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_D12_A022 5', mRNA
sequence
Length = 813
Score = 163 bits (351), Expect = 7e-040
Identities = 64/142 (45%), Positives = 83/142 (58%)
Frame = +2 / -3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP LL+PR + +C I GY + R+ VN W M RDP +W+RP EF P+RF
Sbjct: 637 KETLRLHPSVPLLVPRMAVEACEIEGYYIPKNARLVVNAWGMHRDPGVWERPLEFDPDRF 458
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RGS F+L+PFG+GRR C ++MG H FD LP G E +DM
Sbjct: 457 IGSSVDVRGSDFQLIPFGAGRRICAGMSMGIRMVQLMLATLLHSFDLSLPNGQTPETLDM 278
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E+ L RK PL +VP R+
Sbjct: 277 AESSGLTLRKAAPLLVVPAARI 212
>gb|CF387703.1|CF387703 RTDR1_19_C11.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_19_C11_A015 5', mRNA
sequence
Length = 702
Score = 163 bits (350), Expect = 1e-039
Identities = 62/142 (43%), Positives = 83/142 (58%)
Frame = +2 / -3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP L PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 643 KETFRLHPSTPXLXPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 464
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H DW LPEG + E++DM
Sbjct: 463 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSCDWSLPEGQLPENLDM 284
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E L +K VPL P+ R+
Sbjct: 283 AEAYGLTLQKAVPLLAAPVARL 218
>gb|CF671978.1|CF671978 RTCNT1_60_B07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_B07_A029 5', mRNA sequence
Length = 748
Score = 163 bits (350), Expect = 1e-039
Identities = 66/142 (46%), Positives = 84/142 (59%)
Frame = +2 / +3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP LL+PR T+ +C I GY V R+ VN W M RDP +W+RP EF P+RF
Sbjct: 315 KETLRLHPSVPLLLPRMTVEACEIEGYYVPKNARLMVNAWGMQRDPGVWERPLEFDPDRF 494
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RGS F+++PFG+GRR C ++MG H FD LP G E +DM
Sbjct: 495 IGSSVDVRGSDFQIIPFGAGRRICAGMSMGIRMVQLMLATLLHSFDLSLPNGQPPEALDM 674
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E+ L RK PL +VP RV
Sbjct: 675 AESFGLTLRKAAPLLVVPAARV 740
>gb|DR078693.1|DR078693 RTFEPL1_6_F09.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_6_F09_A029 3', mRNA sequence
Length = 724
Score = 163 bits (350), Expect = 1e-039
Identities = 62/134 (46%), Positives = 84/134 (62%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP +L+PR + + C I GYD+ TR+FVNVW +GRD ++W+ P++F PERF
Sbjct: 89 KETMRLHPVAPMLVPRLSTQDCRIAGYDIPANTRLFVNVWTIGRDGNLWENPDQFMPERF 268
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD +G +ELLPFGSGRR CP ++G H F W P+G ED+DM
Sbjct: 269 NGSTVDVKGRDYELLPFGSGRRMCPGYSLGIKVVHLGLANLIHGFHWCQPDGQNPEDLDM 448
Query: 365 EETGQLAFRKMVPL 406
ET L+ K +PL
Sbjct: 449 GETFGLSTPKTIPL 490
>gb|CF475538.1|CF475538 RTWW2_12_G10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_12_G10_A021 5', mRNA sequence
Length = 750
Score = 162 bits (349), Expect = 1e-039
Identities = 65/142 (45%), Positives = 84/142 (59%)
Frame = +2 / -3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP LL+PR T+ +C I GY V R+ VN W M RDP +W+RP EF P+RF
Sbjct: 607 KETLRLHPSVPLLLPRMTVEACEIEGYYVPKNARLMVNAWGMQRDPGVWERPLEFDPDRF 428
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RGS F+++PFG+GRR C ++MG H FD LP G E +DM
Sbjct: 427 IGSSVDVRGSDFQIIPFGTGRRICAGMSMGIRMVQLMLATLLHSFDLSLPNGQPPEALDM 248
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E+ L RK PL +VP R+
Sbjct: 247 AESFGLTLRKAAPLLVVPAARI 182
>gb|BX784158.1|BX784158 BX784158 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 130A02, mRNA sequence
Length = 679
Score = 160 bits (345), Expect = 5e-039
Identities = 58/142 (40%), Positives = 85/142 (59%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HPP L+IP SC + GY + T++ VN WA+GRDP+IW+ P EF PERF
Sbjct: 80 REVFRLHPPTPLMIPHRAESSCEVAGYMIPKSTKVLVNAWAIGRDPTIWNEPFEFKPERF 259
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
++++G +FEL+PFG+GRR CP + + H F+W LP+G D+DM
Sbjct: 260 MECDIEYKGQNFELIPFGAGRRICPGLPLAHRMVHLVTASLLHSFNWSLPDGTTPGDMDM 439
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E + +K +PL +P R+
Sbjct: 440 TEKFGITLQKALPLIAIPSPRL 505
>gb|DR081343.1|DR081343 RTFEPL1_29_B02.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_29_B02_A029 3', mRNA sequence
Length = 766
Score = 160 bits (345), Expect = 5e-039
Identities = 63/142 (44%), Positives = 82/142 (57%)
Frame = +2 / +1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP LL+PR + +C I GY + R+ VN W M RDP +W+RP E P+RF
Sbjct: 226 KETLRLHPSVPLLVPRMAVEACEIEGYYIPKNARLVVNAWGMHRDPGVWERPLELDPDRF 405
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RGS F+L+PFG+GRR C ++MG H FD LP G E +DM
Sbjct: 406 IGSSVDVRGSDFQLIPFGAGRRICAGMSMGIRMVQLMLATLLHSFDLSLPNGQTPETLDM 585
Query: 365 EETGQLAFRKMVPLCLVPIKRV 430
E+ L RK PL +VP R+
Sbjct: 586 AESSGLTLRKAAPLLVVPAARI 651
>gb|CF402148.1|CF402148 RTWW1_20_B09.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_20_B09_A015 5', mRNA sequence
Length = 795
Score = 160 bits (344), Expect = 7e-039
Identities = 60/134 (44%), Positives = 84/134 (62%)
Frame = +2 / +3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP +L+P + + C I GYD+ TR+FVNVW +GRD +W+ P+EF PERF
Sbjct: 99 KETMRLHPVAPMLVPHLSTQPCRIAGYDIPANTRLFVNVWTIGRDGKLWENPDEFQPERF 278
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
+GS +D +G +ELLPFGSGRR CP + G H F W+LP+G E++DM
Sbjct: 279 KGSTLDVKGRDYELLPFGSGRRMCPGYSHGLKVVYMALSNLIHGFQWKLPDGQNPEELDM 458
Query: 365 EETGQLAFRKMVPL 406
ET L+ + +PL
Sbjct: 459 CETFGLSTPRTIPL 500
>gb|DR010989.1|DR010989 HEAT1_2_D01.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_2_D01_A029 5', mRNA sequence
Length = 599
Score = 156 bits (336), Expect = 8e-038
Identities = 60/134 (44%), Positives = 82/134 (61%)
Frame = +2 / +3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP +L+PR + +C +GGYD+ TR+ VNVW + R+ W++P+EF PERF
Sbjct: 174 KEMMRLHPVAPMLVPRLSTEACKVGGYDIPANTRLHVNVWTIARNSDFWEKPDEFRPERF 353
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
EGS +D +G +ELLPFG+GRR CP +G H F W LP+G ED+DM
Sbjct: 354 EGSALDVKGRDYELLPFGTGRRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQNPEDLDM 533
Query: 365 EETGQLAFRKMVPL 406
ET L+ K PL
Sbjct: 534 GETFGLSTPKTQPL 575
>gb|DR167219.1|DR167219 RTPHOS1_17_A07.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_17_A07_A029 5', mRNA sequence
Length = 745
Score = 156 bits (336), Expect = 8e-038
Identities = 59/131 (45%), Positives = 79/131 (60%)
Frame = +2 / -2
Query: 38 LLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSHVDFRGSS 217
LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF GS VD RG+
Sbjct: 744 LLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTD 565
Query: 218 FELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETGQLAFRKM 397
FE++PFG+GRR C ++MG H FDW LPEG + E++DM E L +K
Sbjct: 564 FEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKA 385
Query: 398 VPLCLVPIKRV 430
VPL P+ R+
Sbjct: 384 VPLLAAPVARL 352
>gb|DR180240.1|DR180240 RTMNUT1_27_G10.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_27_G10_A029 3', mRNA sequence
Length = 819
Score = 156 bits (336), Expect = 8e-038
Identities = 60/134 (44%), Positives = 81/134 (60%)
Frame = +2 / +1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP +L+PR + C I GYD+ TR++VNVW + D W++PEEF PERF
Sbjct: 52 KEMMRLHPVAPMLVPRLSTEPCKIAGYDIPANTRLYVNVWTIAHDAGFWEKPEEFRPERF 231
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
EGS +D +G +ELLPFG+GRR CP ++G H F W LP+G +D+DM
Sbjct: 232 EGSPLDVKGRDYELLPFGTGRRMCPGYSLGLKVVHLGLANLIHGFHWWLPDGQSPKDLDM 411
Query: 365 EETGQLAFRKMVPL 406
ET L+ K PL
Sbjct: 412 GETFGLSTPKTHPL 453
>gb|DR386257.1|DR386257 RTHG1_14_A02.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_14_A02_A029 3', mRNA sequence
Length = 809
Score = 156 bits (336), Expect = 8e-038
Identities = 60/134 (44%), Positives = 81/134 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP +L+PR + C I GYD+ TR++VNVW + D W++PEEF PERF
Sbjct: 26 KEMMRLHPVAPMLVPRLSTEPCKIAGYDIPANTRLYVNVWTIAHDAGFWEKPEEFRPERF 205
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
EGS +D +G +ELLPFG+GRR CP ++G H F W LP+G +D+DM
Sbjct: 206 EGSPLDVKGRDYELLPFGTGRRMCPGYSLGLKVVHLGLANLIHGFHWWLPDGQSPKDLDM 385
Query: 365 EETGQLAFRKMVPL 406
ET L+ K PL
Sbjct: 386 GETFGLSTPKTHPL 427
>gb|DR387368.1|DR387368 RTHG1_21_F12.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_21_F12_A029 3', mRNA sequence
Length = 716
Score = 156 bits (336), Expect = 8e-038
Identities = 60/134 (44%), Positives = 81/134 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP +L+PR + C I GYD+ TR++VNVW + D W++PEEF PERF
Sbjct: 137 KEMMRLHPVAPMLVPRLSTEPCKIAGYDIPANTRLYVNVWTIAHDAGFWEKPEEFRPERF 316
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
EGS +D +G +ELLPFG+GRR CP ++G H F W LP+G +D+DM
Sbjct: 317 EGSPLDVKGRDYELLPFGTGRRMCPGYSLGLKVVHLGLANLIHGFHWWLPDGQSPKDLDM 496
Query: 365 EETGQLAFRKMVPL 406
ET L+ K PL
Sbjct: 497 GETFGLSTPKTHPL 538
>gb|CF388973.1|CF388973 RTDR2_16_D05.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_16_D05_A021 5', mRNA
sequence
Length = 662
Score = 155 bits (334), Expect = 2e-037
Identities = 57/122 (46%), Positives = 76/122 (62%)
Frame = +2 / +3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 276 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 455
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RG+ FE++PFG+GRR C ++MG H FDW LPEG + E++DM
Sbjct: 456 AGSAVDVRGTDFEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDM 635
Query: 365 EE 370
E
Sbjct: 636 AE 641
>gb|CF673059.1|CF673059 RTCNT1_75_F06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_75_F06_A029 5', mRNA sequence
Length = 722
Score = 154 bits (330), Expect = 6e-037
Identities = 58/134 (43%), Positives = 81/134 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP +L+PR + +C +GGYD+ TR+ VNVW + RD W+ P+EF PERF
Sbjct: 233 KEMMRLHPVAPMLVPRLSTEACKVGGYDIPANTRLHVNVWTIARDSGFWENPDEFRPERF 412
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
+GS +D +G ++LLPFG+GRR CP +G H F W LP+G +D+DM
Sbjct: 413 QGSALDVKGRDYQLLPFGTGRRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQSPKDLDM 592
Query: 365 EETGQLAFRKMVPL 406
ET L+ K PL
Sbjct: 593 GETFGLSTPKTQPL 634
>gb|CO409263.1|CO409263 EST839648 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKN53 5' end, mRNA sequence
Length = 915
Score = 154 bits (330), Expect = 6e-037
Identities = 58/134 (43%), Positives = 81/134 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP +L+PR + +C +GGYD+ TR+ VNVW + RD W+ P+EF PERF
Sbjct: 290 KEMMRLHPVAPMLVPRLSTEACKVGGYDIPANTRLHVNVWTIARDSGFWENPDEFRPERF 469
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
+GS +D +G ++LLPFG+GRR CP +G H F W LP+G +D+DM
Sbjct: 470 QGSALDVKGRDYQLLPFGTGRRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQSPKDLDM 649
Query: 365 EETGQLAFRKMVPL 406
ET L+ K PL
Sbjct: 650 GETFGLSTPKTQPL 691
>gb|DT625597.1|DT625597 EST1157521 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA166 5' end, mRNA sequence
Length = 906
Score = 154 bits (330), Expect = 6e-037
Identities = 58/134 (43%), Positives = 81/134 (60%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HP +L+PR + +C +GGYD+ TR+ VNVW + RD W+ P+EF PERF
Sbjct: 290 KEMMRLHPVAPMLVPRLSTEACKVGGYDIPANTRLHVNVWTIARDSGFWENPDEFRPERF 469
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
+GS +D +G ++LLPFG+GRR CP +G H F W LP+G +D+DM
Sbjct: 470 QGSALDVKGRDYQLLPFGTGRRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQSPKDLDM 649
Query: 365 EETGQLAFRKMVPL 406
ET L+ K PL
Sbjct: 650 GETFGLSTPKTQPL 691
>gb|CF400021.1|CF400021 RTWW1_2_F02.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_2_F02_A015 5', mRNA sequence
Length = 696
Score = 153 bits (329), Expect = 8e-037
Identities = 63/141 (44%), Positives = 79/141 (56%)
Frame = +2 / +1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HPP LL PR +C I GY + R+ VN W M RDP +W+RP +F P+RF
Sbjct: 142 KETLRLHPPFPLLAPRMAAEACEIEGYYIPKNARLIVNAWGMQRDPDVWERPLDFDPDRF 321
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RGS F+L+PFG+GRR C ++MG FD LP+G E +DM
Sbjct: 322 IGSSVDVRGSDFQLIPFGAGRRICAGMSMGLRIIQLMLATLLQSFDLCLPDGQSPEKLDM 501
Query: 365 EETGQLAFRKMVPLCLVPIKR 427
E L K VPL VP R
Sbjct: 502 AEAFGLTIHKEVPLLAVPTAR 564
>gb|DR080492.1|DR080492 RTFEPL1_23_C05.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_23_C05_A029 3', mRNA sequence
Length = 770
Score = 153 bits (329), Expect = 8e-037
Identities = 63/141 (44%), Positives = 79/141 (56%)
Frame = +2 / +2
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HPP LL PR +C I GY + R+ VN W M RDP +W+RP +F P+RF
Sbjct: 116 KETLRLHPPFPLLAPRMAAEACEIEGYYIPKNARLIVNAWGMQRDPDVWERPLDFDPDRF 295
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RGS F+L+PFG+GRR C ++MG FD LP+G E +DM
Sbjct: 296 IGSSVDVRGSDFQLIPFGAGRRICAGMSMGLRIIQLMLATLLQSFDLCLPDGQSPEKLDM 475
Query: 365 EETGQLAFRKMVPLCLVPIKR 427
E L K VPL VP R
Sbjct: 476 AEAFGLTIHKEVPLLAVPTAR 538
>gb|DN460749.1|DN460749 EST956548 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPII213 5' end, mRNA sequence
Length = 720
Score = 153 bits (328), Expect = 1e-036
Identities = 57/129 (44%), Positives = 77/129 (59%)
Frame = +2 / +1
Query: 44 IPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSHVDFRGSSFE 223
+PR +C + GY + R+ VN W + RDP +W+RP EF PERF GS VD RG+ FE
Sbjct: 1 LPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFE 180
Query: 224 LLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETGQLAFRKMVP 403
++PFG+GRR C ++MG H FDW LPEG + E++DM E L +K VP
Sbjct: 181 VIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVP 360
Query: 404 LCLVPIKRV 430
L P+ R+
Sbjct: 361 LLAAPVARL 387
>gb|DT626855.1|DT626855 EST1159931 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAS14 5' end, mRNA sequence
Length = 720
Score = 153 bits (328), Expect = 1e-036
Identities = 57/129 (44%), Positives = 77/129 (59%)
Frame = +2 / +1
Query: 44 IPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSHVDFRGSSFE 223
+PR +C + GY + R+ VN W + RDP +W+RP EF PERF GS VD RG+ FE
Sbjct: 1 LPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFE 180
Query: 224 LLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETGQLAFRKMVP 403
++PFG+GRR C ++MG H FDW LPEG + E++DM E L +K VP
Sbjct: 181 VIPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVP 360
Query: 404 LCLVPIKRV 430
L P+ R+
Sbjct: 361 LLAAPVARL 387
>gb|DR058570.1|DR058570 RTNIT1_12_D05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_12_D05_A029 5', mRNA sequence
Length = 592
Score = 152 bits (327), Expect = 1e-036
Identities = 63/141 (44%), Positives = 79/141 (56%)
Frame = +2 / -3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R+HPP LL PR +C I GY + R+ VN W M RDP +W+RP +F P+RF
Sbjct: 527 KETLRLHPPFPLLAPRMAAEACEIEGYYIPKNARLIVNAWGMQRDPDVWERPLDFDPDRF 348
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDM 364
GS VD RGS F+L+PFG+GRR C ++MG FD LP+G E +DM
Sbjct: 347 IGSSVDVRGSDFQLIPFGAGRRICAGMSMGLRIIQLMLATLLQSFDLCLPDGHSPEKLDM 168
Query: 365 EETGQLAFRKMVPLCLVPIKR 427
E L K VPL VP R
Sbjct: 167 AEAFGLTIHKEVPLLAVPTAR 105
>gb|DR057043.1|DR057043 RTNIT1_2_E01.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_2_E01_A029 3', mRNA sequence
Length = 641
Score = 152 bits (326), Expect = 2e-036
Identities = 57/128 (44%), Positives = 76/128 (59%)
Frame = +2 / +2
Query: 47 PRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSHVDFRGSSFEL 226
PR +C + GY + R+ VN W + RDP +W+RP EF PERF GS VD RG+ FE+
Sbjct: 2 PRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEV 181
Query: 227 LPFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETGQLAFRKMVPL 406
+PFG+GRR C ++MG H FDW LPEG + E++DM E L +K VPL
Sbjct: 182 IPFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPL 361
Query: 407 CLVPIKRV 430
P+ R+
Sbjct: 362 LAAPVARL 385
>gb|CF393317.1|CF393317 RTDR3_20_D09.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_20_D09_A022 5', mRNA
sequence
Length = 774
Score = 87.2 bits (184), Expect(3) = 3e-036
Identities = 31/63 (49%), Positives = 41/63 (65%)
Frame = +2 / +3
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E R++P LL P E+M C + GY++ GTR+ VN WA+GRDP W+ EEF PERF
Sbjct: 210 KETLRLYPSAPLLAPHESMEPCTVCGYEIPAGTRVIVNAWAIGRDPKSWEDAEEFKPERF 389
Query: 185 EGS 193
S
Sbjct: 390 TES 398
Score = 54.7 bits (113), Expect(3) = 3e-036
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +2 / +1
Query: 311 HCFDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV 430
HCFDW+LP+GM D+DM E LA + VPL +P R+
Sbjct: 526 HCFDWRLPDGMEGRDLDMNEIFGLAIPRAVPLLAIPTPRL 645
Score = 47.8 bits (98), Expect(3) = 3e-036
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2 / +3
Query: 191 SHVDFRGSSFELLPFGSGRRSCPAIAMG 274
S VD RG F+L+PFGSGRR CP + +G
Sbjct: 405 SCVDVRGQDFQLIPFGSGRRGCPGMQLG 488
>emb|AJ309081.1|PPI309081 Pinus pinaster partial mRNA for putative flavonoid 3'-hydroxylase
Length = 707
Score = 120 bits (257), Expect(2) = 8e-036
Identities = 43/87 (49%), Positives = 58/87 (66%)
Frame = +2 / +1
Query: 5 QENFRIHPPGTLLIPRETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERF 184
+E FR+HP LL+PR +C + GY + R+ VN W + RDP +W+RP EF PERF
Sbjct: 10 KETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERF 189
Query: 185 EGSHVDFRGSSFELLPFGSGRRSCPAI 265
GS VD RG+ FE++PFG+GRR C +
Sbjct: 190 AGSAVDVRGTDFEVIPFGAGRRVCAGV 270
Score = 49.6 bits (102), Expect(2) = 8e-036
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2 / +1
Query: 311 HCFDWQLPEGMVEEDIDMEETGQLAFRKMVPLCLVPIKRV 430
H FDW LPEG + E++DM E L +K VPL P R+
Sbjct: 313 HSFDWSLPEGQLPENMDMAEAYGLTLQKAVPLLAAPAARL 432
>gb|DR025160.1|DR025160 STRS1_70_A08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_70_A08_A034 3', mRNA sequence
Length = 733
Score = 149 bits (321), Expect = 1e-035
Identities = 56/127 (44%), Positives = 76/127 (59%)
Frame = +2 / +3
Query: 50 RETMRSCVIGGYDVLPGTRIFVNVWAMGRDPSIWDRPEEFSPERFEGSHVDFRGSSFELL 229
R +C + GY + R+ VN W + RDP +W+RP EF PERF GS VD RG+ FE++
Sbjct: 3 RLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVI 182
Query: 230 PFGSGRRSCPAIAMGXXXXXXXXXXXXHCFDWQLPEGMVEEDIDMEETGQLAFRKMVPLC 409
PFG+GRR C ++MG H FDW LPEG + E++DM E L +K+VPL
Sbjct: 183 PFGAGRRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKVVPLL 362
Query: 410 LVPIKRV 430
P+ R+
Sbjct: 363 AAPVARL 383
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 313,725,331
Number of Sequences: 355925
Number of extensions: 5161221
Number of successful extensions: 89652
Number of sequences better than 1.0e-020: 370
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 6947016960
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)