TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619325.2.1
(1403 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR024613.1|DR024613 STRS1_66_E01.b1_A034 Shoot tip pitch... 87 3e-066
gb|DR060871.1|DR060871 RTNIT1_30_C05.g1_A029 Roots minus ni... 87 4e-064
gb|CO161849.1|CO161849 FLD1_31_C06.g1_A029 Root flooded Pin... 83 6e-062
gb|DR079785.1|DR079785 RTFEPL1_17_D11.g1_A029 Roots plus ad... 83 7e-060
dbj|BD224562.1| Materials and methods for the modification ... 77 1e-058
gb|CF389670.1|CF389670 RTDR2_8_D11.g1_A021 Loblolly pine ro... 85 4e-056
gb|CF388014.1|CF388014 RTDR1_17_B01.g1_A015 Loblolly pine r... 86 7e-056
gb|CX652846.1|CX652846 COLD1_61_G11.g1_A029 Root cold Pinus... 129 1e-055
gb|CO364127.1|CO364127 RTK1_13_G11.g1_A029 Roots minus pota... 85 1e-054
gb|CX652982.1|CX652982 COLD1_62_E03.g1_A029 Root cold Pinus... 90 1e-054
gb|DR688340.1|DR688340 EST1078424 Normalized pine embryo li... 80 4e-053
gb|AF291667.1|AF291667 Pinus sylvestris class III peroxidas... 80 5e-053
dbj|BD224564.1| Materials and methods for the modification ... 84 1e-052
gb|DT631437.1|DT631437 EST1146368 Normalized pine embryo li... 85 3e-052
gb|DR163369.1|DR163369 RTFE1_42_B11.g1_A029 Roots minus iro... 78 6e-052
gb|DR019354.1|DR019354 STRS1_29_B03.g1_A034 Shoot tip pitch... 93 2e-051
gb|DR117522.1|DR117522 RTMG1_7_B03.g1_A029 Roots minus magn... 74 3e-051
gb|CO369965.1|CO369965 RTK1_55_C11.g1_A029 Roots minus pota... 107 3e-051
gb|CO361618.1|CO361618 NDL2_6_A03.b1_A029 Needles control 2... 81 4e-051
gb|DR079581.1|DR079581 RTFEPL1_12_E11.b1_A029 Roots plus ad... 84 5e-051
dbj|BD224554.1| Materials and methods for the modification ... 76 7e-051
dbj|BD224556.1| Materials and methods for the modification ... 73 8e-051
gb|CF400609.1|CF400609 RTWW1_6_D05.g1_A015 Well-watered lob... 84 2e-050
gb|CO165064.1|CO165064 FLD1_52_D01.b1_A029 Root flooded Pin... 72 4e-050
gb|CO366567.1|CO366567 RTK1_28_D08.g1_A029 Roots minus pota... 81 7e-050
gb|DR079660.1|DR079660 RTFEPL1_12_E11.g1_A029 Roots plus ad... 84 2e-049
gb|DR053478.1|DR053478 RTCA1_11_A02.g1_A029 Roots minus cal... 92 3e-049
gb|DR098772.1|DR098772 STRR1_47_F07.g1_A033 Stem Response R... 76 4e-049
gb|CF663696.1|CF663696 RTCNT1_4_C09.g1_A029 Root control Pi... 92 6e-049
gb|DR180626.1|DR180626 RTMNUT1_33_G02.g1_A029 Roots minus m... 90 6e-049
gb|DR096218.1|DR096218 STRR1_26_C02.g1_A033 Stem Response R... 98 1e-048
gb|CF474383.1|CF474383 RTWW2_20_F10.g1_A021 Well-watered lo... 133 1e-048
gb|DR164099.1|DR164099 RTFE1_46_G03.g1_A029 Roots minus iro... 133 2e-048
gb|CF477732.1|CF477732 RTWW3_9_H04.g1_A022 Well-watered lob... 87 2e-048
gb|DR056162.1|DR056162 RTCA1_28_A10.g1_A029 Roots minus cal... 136 3e-048
gb|CO366046.1|CO366046 RTK1_20_G03.g1_A029 Roots minus pota... 76 4e-048
gb|DR088958.1|DR088958 RTAL1_5_E09.g1_A029 Roots plus added... 72 5e-048
gb|CF671224.1|CF671224 RTCNT1_55_D05.g1_A029 Root control P... 129 6e-048
gb|CO199407.1|CO199407 GEO2_1_A09.b1_A032 Root gravitropism... 137 9e-048
gb|DR096260.1|DR096260 STRR1_26_G02.g1_A033 Stem Response R... 75 9e-048
dbj|BD224561.1| Materials and methods for the modification ... 76 1e-047
gb|CF391763.1|CF391763 RTDR3_11_E05.g1_A022 Loblolly pine r... 90 1e-047
gb|CX715978.1|CX715978 RTPQ1_39_D06.b1_A032 Roots treated w... 84 2e-047
gb|DT634752.1|DT634752 EST1149683 Normalized pine embryo li... 80 3e-047
gb|CF671964.1|CF671964 RTCNT1_60_A05.g1_A029 Root control P... 85 4e-047
gb|DR683429.1|DR683429 EST1073505 Normalized pine embryo li... 85 4e-047
gb|CF672738.1|CF672738 RTCNT1_73_D06.g1_A029 Root control P... 85 4e-047
gb|CO201890.1|CO201890 RTCNT2_8_F12.g1_A029 Root control 2 ... 83 5e-047
gb|CF401192.1|CF401192 RTWW1_10_H07.g1_A015 Well-watered lo... 71 1e-046
gb|DR093649.1|DR093649 STRR1_9_C07.g1_A033 Stem Response Re... 120 1e-046
gb|DR090425.1|DR090425 RTAL1_15_A06.b1_A029 Roots plus adde... 83 2e-046
gb|CO167718.1|CO167718 FLD1_70_E12.g1_A029 Root flooded Pin... 83 2e-046
gb|CF390722.1|CF390722 RTDR2_17_B08.g1_A021 Loblolly pine r... 75 4e-046
gb|DR050769.1|DR050769 RTBOR1_25_C07.g1_A029 Roots plus add... 84 5e-046
gb|DT633320.1|DT633320 EST1148251 Normalized pine embryo li... 79 5e-046
gb|DR023305.1|DR023305 STRS1_56_E12.g1_A034 Shoot tip pitch... 120 5e-046
gb|CO161773.1|CO161773 FLD1_31_C06.b1_A029 Root flooded Pin... 83 7e-046
gb|CF664709.1|CF664709 RTCNT1_11_B04.g1_A029 Root control P... 85 7e-046
gb|DR744459.1|DR744459 RTCU1_22_C12.g1_A029 Roots plus adde... 120 7e-046
gb|DR078213.1|DR078213 RTFEPL1_2_D10.g1_A029 Roots plus add... 83 9e-046
gb|CF477229.1|CF477229 RTWW3_6_G02.g1_A022 Well-watered lob... 79 1e-045
gb|CF385386.1|CF385386 RTDR1_3_E05.g1_A015 Loblolly pine ro... 74 1e-045
gb|CF387989.1|CF387989 RTDR1_17_C01.g1_A015 Loblolly pine r... 86 2e-045
gb|CF386345.1|CF386345 RTDR1_13_H08.g1_A015 Loblolly pine r... 72 2e-045
gb|DR095060.1|DR095060 STRR1_18_C01.g1_A033 Stem Response R... 83 3e-045
gb|CO167258.1|CO167258 FLD1_67_H01.g1_A029 Root flooded Pin... 74 5e-045
gb|CF385091.1|CF385091 RTDR1_1_H08.g1_A015 Loblolly pine ro... 72 5e-045
gb|DR093384.1|DR093384 STRR1_7_H12.g1_A033 Stem Response Re... 80 6e-045
gb|CO366264.1|CO366264 RTK1_26_G06.g1_A029 Roots minus pota... 116 9e-045
gb|DR050063.1|DR050063 RTBOR1_21_C03.b1_A029 Roots plus add... 93 1e-044
gb|DR102535.1|DR102535 STRR1_81_G06.g1_A033 Stem Response R... 74 2e-044
gb|CO165441.1|CO165441 FLD1_54_C07.g1_A029 Root flooded Pin... 105 3e-044
gb|CO366088.1|CO366088 RTK1_25_F07.g1_A029 Roots minus pota... 114 3e-044
gb|CX650291.1|CX650291 COLD1_44_E09.g1_A029 Root cold Pinus... 74 4e-044
gb|DR093842.1|DR093842 STRR1_10_F04.g1_A033 Stem Response R... 105 7e-044
gb|BX681908.1|BX681908 BX681908 RS Pinus pinaster cDNA clon... 83 9e-044
gb|BX678596.1|BX678596 BX678596 RS Pinus pinaster cDNA clon... 83 9e-044
gb|DR686286.1|DR686286 EST1076364 Normalized pine embryo li... 79 1e-043
gb|CF663228.1|CF663228 RTCNT1_1_C11.g1_A029 Root control Pi... 84 1e-043
gb|CF390326.1|CF390326 RTDR2_18_B09.g1_A021 Loblolly pine r... 69 3e-043
gb|CF402751.1|CF402751 RTWW1_22_C06.g1_A015 Well-watered lo... 74 4e-043
gb|CO163625.1|CO163625 FLD1_42_F11.g1_A029 Root flooded Pin... 71 4e-043
gb|CX650746.1|CX650746 COLD1_47_G06.g1_A029 Root cold Pinus... 80 4e-043
gb|CV032135.1|CV032135 RTNACL1_6_D04.b1_A029 Roots plus add... 78 4e-043
gb|CO367149.1|CO367149 RTK1_32_B07.g1_A029 Roots minus pota... 74 5e-043
gb|DR017780.1|DR017780 STRS1_18_A08.g1_A034 Shoot tip pitch... 70 5e-043
gb|DR100195.1|DR100195 STRR1_62_H04.b1_A033 Stem Response R... 78 8e-043
gb|DR053196.1|DR053196 RTCA1_9_C11.g1_A029 Roots minus calc... 80 8e-043
gb|CX651458.1|CX651458 COLD1_52_C01.g1_A029 Root cold Pinus... 77 8e-043
gb|DR069584.1|DR069584 RTDK1_8_D05.b1_A029 Roots, dark Pinu... 67 9e-043
gb|CO159641.1|CO159641 FLD1_14_G12.g1_A029 Root flooded Pin... 67 9e-043
gb|BX678783.1|BX678783 BX678783 RS Pinus pinaster cDNA clon... 90 9e-043
gb|DR683943.1|DR683943 EST1074019 Normalized pine embryo li... 93 2e-042
gb|DT631954.1|DT631954 EST1146885 Normalized pine embryo li... 93 2e-042
gb|DR025273.1|DR025273 STRS1_70_D08.g1_A034 Shoot tip pitch... 75 2e-042
gb|CX646289.1|CX646289 COLD1_8_A11.g1_A029 Root cold Pinus ... 75 2e-042
gb|CO161767.1|CO161767 FLD1_31_B09.b1_A029 Root flooded Pin... 96 3e-042
gb|CF402767.1|CF402767 RTWW1_22_E05.g1_A015 Well-watered lo... 69 3e-042
gb|CF401583.1|CF401583 RTWW1_13_A11.g1_A015 Well-watered lo... 74 4e-042
gb|CO367295.1|CO367295 RTK1_33_A07.g1_A029 Roots minus pota... 74 4e-042
gb|CF402030.1|CF402030 RTWW1_16_F01.g1_A015 Well-watered lo... 74 4e-042
gb|DR020955.1|DR020955 STRS1_40_A01.g1_A034 Shoot tip pitch... 77 4e-042
dbj|BD224558.1| Materials and methods for the modification ... 76 4e-042
gb|CO164700.1|CO164700 FLD1_49_E11.g1_A029 Root flooded Pin... 104 4e-042
gb|CX652768.1|CX652768 COLD1_61_G11.b1_A029 Root cold Pinus... 81 4e-042
gb|DR019663.1|DR019663 STRS1_31_C06.g1_A034 Shoot tip pitch... 77 7e-042
gb|DR011520.1|DR011520 HEAT1_6_E12.b1_A029 Root at 37 C for... 72 1e-041
gb|CO161327.1|CO161327 FLD1_28_C11.b1_A029 Root flooded Pin... 80 1e-041
gb|DR163290.1|DR163290 RTFE1_42_B11.b1_A029 Roots minus iro... 78 1e-041
gb|DR068658.1|DR068658 RTDK1_2_D02.b1_A029 Roots, dark Pinu... 72 1e-041
gb|DR051349.1|DR051349 RTBOR1_29_A10.g1_A029 Roots plus add... 72 1e-041
gb|CO364042.1|CO364042 RTK1_13_G11.b1_A029 Roots minus pota... 85 1e-041
gb|DT624617.1|DT624617 EST1158952 Sequencing ESTs from lobl... 65 1e-041
gb|CO159324.1|CO159324 FLD1_12_H06.g1_A029 Root flooded Pin... 104 1e-041
gb|DR016129.1|DR016129 STRS1_7_H01.g1_A034 Shoot tip pitch ... 73 2e-041
gb|CF475232.1|CF475232 RTWW2_14_B02.g1_A021 Well-watered lo... 80 2e-041
gb|DR685604.1|DR685604 EST1075681 Normalized pine embryo li... 75 3e-041
gb|CF400173.1|CF400173 RTWW1_3_F07.g1_A015 Well-watered lob... 72 3e-041
gb|CF391571.1|CF391571 RTDR3_9_C02.g1_A022 Loblolly pine ro... 72 3e-041
gb|CF387078.1|CF387078 RTDR1_10_H09.g1_A015 Loblolly pine r... 72 3e-041
gb|DR742871.1|DR742871 RTCU1_7_C01.g2_A029 Roots plus added... 72 3e-041
gb|CO173071.1|CO173071 NDL1_33_G05.g1_A029 Needles control ... 81 3e-041
gb|DR057895.1|DR057895 RTNIT1_8_A09.g1_A029 Roots minus nit... 72 3e-041
gb|CF471789.1|CF471789 RTDS1_6_E07.g1_A015 Drought-stressed... 120 3e-041
gb|DR094759.1|DR094759 STRR1_16_C10.g1_A033 Stem Response R... 73 3e-041
gb|CF666432.1|CF666432 RTCNT1_23_F04.b1_A029 Root control P... 79 4e-041
gb|DR110107.1|DR110107 RTS1_8_C10.g1_A029 Roots minus sulfu... 73 5e-041
gb|CO157877.1|CO157877 FLD1_2_F04.g1_A029 Root flooded Pinu... 72 5e-041
gb|CF400026.1|CF400026 RTWW1_2_G05.g1_A015 Well-watered lob... 74 5e-041
gb|BX665987.1|BX665987 BX665987 RN Pinus pinaster cDNA clon... 73 9e-041
gb|DT637471.1|DT637471 EST1152402 Normalized pine embryo li... 73 9e-041
gb|DR099040.1|DR099040 STRR1_52_C09.b1_A033 Stem Response R... 70 1e-040
gb|DR069645.1|DR069645 RTDK1_8_C03.g1_A029 Roots, dark Pinu... 72 1e-040
gb|CO369651.1|CO369651 RTK1_48_C06.g1_A029 Roots minus pota... 72 1e-040
gb|CO160800.1|CO160800 FLD1_24_B07.g1_A029 Root flooded Pin... 73 1e-040
gb|DR117444.1|DR117444 RTMG1_7_B03.b1_A029 Roots minus magn... 74 2e-040
gb|DR053927.1|DR053927 RTCA1_14_E05.b1_A029 Roots minus cal... 120 2e-040
gb|CF666727.1|CF666727 RTCNT1_25_E03.g1_A029 Root control P... 70 2e-040
gb|DR024895.1|DR024895 STRS1_68_F04.b1_A034 Shoot tip pitch... 73 2e-040
gb|DR682208.1|DR682208 EST1072283 Normalized pine embryo li... 79 2e-040
gb|DR682788.1|DR682788 EST1072863 Normalized pine embryo li... 79 2e-040
gb|DR742406.1|DR742406 RTCU1_3_G03.g2_A029 Roots plus added... 79 2e-040
gb|DR098451.1|DR098451 STRR1_45_C10.g1_A033 Stem Response R... 73 2e-040
gb|DR683701.1|DR683701 EST1073777 Normalized pine embryo li... 69 2e-040
gb|DR071838.1|DR071838 RTDK1_22_H10.b1_A029 Roots, dark Pin... 69 3e-040
gb|DR177199.1|DR177199 RTMNUT1_3_F07.g1_A029 Roots minus mi... 69 3e-040
gb|DR089283.1|DR089283 RTAL1_7_E08.g1_A029 Roots plus added... 69 3e-040
gb|DN448978.1|DN448978 EST944777 Sequencing ESTs from loblo... 65 3e-040
gb|AL751213.1|AL751213 AL751213 RS Pinus pinaster cDNA clon... 74 4e-040
gb|DN449410.1|DN449410 EST945209 Sequencing ESTs from loblo... 65 4e-040
gb|DT634196.1|DT634196 EST1149127 Normalized pine embryo li... 79 6e-040
gb|DT633972.1|DT633972 EST1148903 Normalized pine embryo li... 79 6e-040
gb|DR687518.1|DR687518 EST1077600 Normalized pine embryo li... 79 6e-040
gb|CF395786.1|CF395786 RTDS2_17_B07.g1_A021 Drought-stresse... 120 6e-040
gb|DR690617.1|DR690617 EST1080703 Normalized pine embryo li... 73 8e-040
gb|BX678020.1|BX678020 BX678020 RN Pinus pinaster cDNA clon... 82 8e-040
gb|CR394388.1|CR394388 CR394388 RN Pinus pinaster cDNA clon... 82 8e-040
gb|DR743557.1|DR743557 RTCU1_16_E06.g1_A029 Roots plus adde... 70 1e-039
gb|DR386541.1|DR386541 RTHG1_15_H06.g1_A029 Roots plus adde... 73 1e-039
gb|DR094620.1|DR094620 STRR1_15_E08.g1_A033 Stem Response R... 80 1e-039
gb|CX713178.1|CX713178 RTPQ1_7_B01.g1_A032 Roots treated wi... 72 1e-039
gb|DR096092.1|DR096092 STRR1_25_E03.g1_A033 Stem Response R... 102 1e-039
gb|DR094440.1|DR094440 STRR1_14_D01.g1_A033 Stem Response R... 76 2e-039
gb|CO197967.1|CO197967 GEO1_10_H07.b1_A029 Root gravitropis... 73 3e-039
gb|CF390300.1|CF390300 RTDR2_18_C09.g1_A021 Loblolly pine r... 82 3e-039
gb|DR016861.1|DR016861 STRS1_12_D06.g1_A034 Shoot tip pitch... 66 3e-039
gb|DR022504.1|DR022504 STRS1_51_C02.g1_A034 Shoot tip pitch... 71 3e-039
gb|CO163593.1|CO163593 FLD1_42_C09.g1_A029 Root flooded Pin... 74 4e-039
gb|DT634565.1|DT634565 EST1149496 Normalized pine embryo li... 69 4e-039
gb|CO165597.1|CO165597 FLD1_55_D10.g1_A029 Root flooded Pin... 93 5e-039
gb|CO368475.1|CO368475 RTK1_40_G10.g1_A029 Roots minus pota... 75 5e-039
gb|DR110447.1|DR110447 RTS1_11_A03.b1_A029 Roots minus sulf... 79 5e-039
gb|DR182041.1|DR182041 RTMNUT1_42_C02.g1_A029 Roots minus m... 75 5e-039
gb|CF471915.1|CF471915 RTDS1_7_E08.g1_A015 Drought-stressed... 79 5e-039
gb|DR057181.1|DR057181 RTNIT1_4_D04.b1_A029 Roots minus nit... 83 5e-039
gb|DR179643.1|DR179643 RTMNUT1_23_A02.g2_A029 Roots minus m... 79 5e-039
gb|CF387396.1|CF387396 RTDR1_12_G07.g1_A015 Loblolly pine r... 75 5e-039
gb|DR092479.1|DR092479 STRR1_1_D06.g1_A033 Stem Response Re... 66 5e-039
gb|CF666909.1|CF666909 RTCNT1_27_A03.b1_A029 Root control P... 70 7e-039
gb|CF470625.1|CF470625 RTDS1_13_E05.g1_A015 Drought-stresse... 83 7e-039
gb|DR179945.1|DR179945 RTMNUT1_25_B11.g1_A029 Roots minus m... 75 7e-039
gb|DR180204.1|DR180204 RTMNUT1_27_D03.b1_A029 Roots minus m... 82 1e-038
gb|CF399148.1|CF399148 RTDS3_9_F04.g1_A022 Drought-stressed... 95 1e-038
gb|CO164640.1|CO164640 FLD1_49_G12.b1_A029 Root flooded Pin... 70 1e-038
gb|CF387203.1|CF387203 RTDR1_11_E10.g1_A015 Loblolly pine r... 83 1e-038
gb|DR096212.1|DR096212 STRR1_26_B07.g1_A033 Stem Response R... 70 1e-038
gb|DR023270.1|DR023270 STRS1_56_B11.g1_A034 Shoot tip pitch... 71 1e-038
gb|CO170313.1|CO170313 NDL1_13_E07.b1_A029 Needles control ... 98 2e-038
gb|DR052042.1|DR052042 RTCA1_2_C02.b1_A029 Roots minus calc... 73 2e-038
gb|DR014964.1|DR014964 HEAT1_52_E04.g1_A029 Root at 37 C fo... 73 2e-038
gb|CO369276.1|CO369276 RTK1_46_C07.b1_A029 Roots minus pota... 73 2e-038
gb|CO365485.1|CO365485 RTK1_17_G11.b1_A029 Roots minus pota... 73 2e-038
gb|DR163917.1|DR163917 RTFE1_45_E11.g1_A029 Roots minus iro... 73 2e-038
gb|CF673074.1|CF673074 RTCNT1_75_H04.g1_A029 Root control P... 73 2e-038
gb|DR080848.1|DR080848 RTFEPL1_25_D11.g1_A029 Roots plus ad... 73 2e-038
gb|CF390344.1|CF390344 RTDR2_18_B10.g1_A021 Loblolly pine r... 73 2e-038
gb|CX651325.1|CX651325 COLD1_51_C12.g1_A029 Root cold Pinus... 75 2e-038
gb|CO369092.1|CO369092 RTK1_44_H09.g1_A029 Roots minus pota... 73 2e-038
gb|CO367969.1|CO367969 RTK1_37_G06.g1_A029 Roots minus pota... 75 2e-038
gb|DR013997.1|DR013997 HEAT1_22_F12.g1_A029 Root at 37 C fo... 73 2e-038
gb|CF670206.1|CF670206 RTCNT1_48_F03.g1_A029 Root control P... 73 2e-038
gb|DR057942.1|DR057942 RTNIT1_8_F01.g1_A029 Roots minus nit... 73 2e-038
gb|CF668988.1|CF668988 RTCNT1_39_H03.g1_A029 Root control P... 73 2e-038
gb|CF668285.1|CF668285 RTCNT1_35_C05.g1_A029 Root control P... 73 2e-038
gb|DR060993.1|DR060993 RTNIT1_31_H08.b1_A029 Roots minus ni... 73 2e-038
gb|DR386060.1|DR386060 RTHG1_12_E05.g1_A029 Roots plus adde... 75 2e-038
gb|DR050282.1|DR050282 RTBOR1_22_A07.g1_A029 Roots plus add... 73 2e-038
gb|DR070821.1|DR070821 RTDK1_15_G06.g1_A029 Roots, dark Pin... 73 2e-038
gb|CF389421.1|CF389421 RTDR2_7_F05.g1_A021 Loblolly pine ro... 73 2e-038
gb|DR091318.1|DR091318 RTAL1_20_F12.g1_A029 Roots plus adde... 75 2e-038
gb|DR072451.1|DR072451 RTDK1_26_H06.b1_A029 Roots, dark Pin... 73 2e-038
gb|DR016638.1|DR016638 STRS1_11_G02.b1_A034 Shoot tip pitch... 120 3e-038
gb|DT638588.1|DT638588 EST1153519 Normalized pine embryo li... 120 3e-038
gb|DR069621.1|DR069621 RTDK1_8_H07.b1_A029 Roots, dark Pinu... 120 3e-038
gb|CO198989.1|CO198989 GEO1_18_A09.b1_A029 Root gravitropis... 120 3e-038
gb|DR068905.1|DR068905 RTDK1_3_C10.g1_A029 Roots, dark Pinu... 120 3e-038
gb|DR091452.1|DR091452 RTAL1_21_E10.g1_A029 Roots plus adde... 120 3e-038
gb|DR025424.1|DR025424 STRS1_71_C01.g1_A034 Shoot tip pitch... 120 3e-038
gb|DR071649.1|DR071649 RTDK1_21_F09.b1_A029 Roots, dark Pin... 120 3e-038
gb|DR099503.1|DR099503 STRR1_56_C09.b1_A033 Stem Response R... 120 3e-038
gb|DR049695.1|DR049695 RTBOR1_18_A09.g1_A029 Roots plus add... 120 3e-038
gb|CF388662.1|CF388662 RTDR2_4_A11.g1_A021 Loblolly pine ro... 120 3e-038
gb|CF668655.1|CF668655 RTCNT1_37_G11.g1_A029 Root control P... 120 3e-038
gb|CF663591.1|CF663591 RTCNT1_3_H10.g1_A029 Root control Pi... 120 3e-038
gb|CO199580.1|CO199580 GEO2_2_E03.b1_A032 Root gravitropism... 120 3e-038
gb|DR112882.1|DR112882 RTS1_31_G05.b1_A029 Roots minus sulf... 120 3e-038
gb|CO198990.1|CO198990 GEO1_18_A10.b1_A029 Root gravitropis... 120 3e-038
gb|CX713348.1|CX713348 RTPQ1_8_C04.g1_A032 Roots treated wi... 120 3e-038
gb|CF395584.1|CF395584 RTDS2_12_C04.g1_A021 Drought-stresse... 120 3e-038
gb|CF395995.1|CF395995 RTDS2_20_E10.g1_A021 Drought-stresse... 120 3e-038
gb|CF665894.1|CF665894 RTCNT1_19_F09.b1_A029 Root control P... 120 3e-038
gb|CO173216.1|CO173216 NDL1_34_F05.g1_A029 Needles control ... 120 3e-038
gb|DR015756.1|DR015756 STRS1_5_A07.g1_A034 Shoot tip pitch ... 120 3e-038
gb|DR098475.1|DR098475 STRR1_45_F05.g1_A033 Stem Response R... 120 3e-038
gb|CX646014.1|CX646014 COLD1_6_F01.g1_A029 Root cold Pinus ... 120 3e-038
gb|CF670970.1|CF670970 RTCNT1_53_G05.g1_A029 Root control P... 120 3e-038
gb|DR071585.1|DR071585 RTDK1_20_G11.g1_A029 Roots, dark Pin... 77 3e-038
gb|CX648735.1|CX648735 COLD1_30_C06.g1_A029 Root cold Pinus... 74 3e-038
gb|CO160498.1|CO160498 FLD1_21_A02.g1_A029 Root flooded Pin... 93 4e-038
gb|AL751293.1|AL751293 AL751293 RS Pinus pinaster cDNA clon... 74 4e-038
gb|CO163084.1|CO163084 FLD1_39_H03.b1_A029 Root flooded Pin... 69 5e-038
gb|CF479349.1|CF479349 RTWW3_23_H03.g1_A022 Well-watered lo... 74 5e-038
gb|DN457526.1|DN457526 EST953325 Sequencing ESTs from loblo... 65 5e-038
gb|DN448778.1|DN448778 EST944577 Sequencing ESTs from loblo... 65 5e-038
gb|DT624332.1|DT624332 EST1158607 Sequencing ESTs from lobl... 65 5e-038
dbj|BD224362.1| Materials and methods for the modification ... 61 6e-038
dbj|BD273000.1| Materials and methods for the modification ... 61 6e-038
gb|CO161398.1|CO161398 FLD1_28_C04.g1_A029 Root flooded Pin... 73 6e-038
gb|DR054864.1|DR054864 RTCA1_20_B09.b1_A029 Roots minus cal... 81 6e-038
gb|CF475874.1|CF475874 RTWW2_15_B12.g1_A021 Well-watered lo... 69 6e-038
gb|CF385370.1|CF385370 RTDR1_3_C04.g1_A015 Loblolly pine ro... 71 6e-038
gb|CF473758.1|CF473758 RTWW2_4_H09.g1_A021 Well-watered lob... 93 7e-038
gb|CF473911.1|CF473911 RTWW2_19_A11.g1_A021 Well-watered lo... 120 8e-038
gb|DR089787.1|DR089787 RTAL1_10_G01.g1_A029 Roots plus adde... 120 8e-038
gb|DR021354.1|DR021354 STRS1_44_C09.b1_A034 Shoot tip pitch... 71 1e-037
gb|DR072126.1|DR072126 RTDK1_24_F04.b1_A029 Roots, dark Pin... 120 2e-037
gb|DT634886.1|DT634886 EST1149817 Normalized pine embryo li... 102 2e-037
gb|CX652898.1|CX652898 COLD1_62_E03.b1_A029 Root cold Pinus... 90 2e-037
gb|CF389796.1|CF389796 RTDR2_5_A11.g1_A021 Loblolly pine ro... 72 2e-037
gb|CF395450.1|CF395450 RTDS2_11_D11.g1_A021 Drought-stresse... 72 2e-037
gb|CF474576.1|CF474576 RTWW2_9_B10.g1_A021 Well-watered lob... 72 2e-037
gb|CF479199.1|CF479199 RTWW3_24_F05.g1_A022 Well-watered lo... 72 2e-037
gb|DR694171.1|DR694171 EST1084261 Normalized pine embryo li... 120 4e-037
gb|DR020411.1|DR020411 STRS1_36_F08.g1_A034 Shoot tip pitch... 73 4e-037
gb|DR070964.1|DR070964 RTDK1_16_E10.g1_A029 Roots, dark Pin... 86 4e-037
gb|CX650259.1|CX650259 COLD1_44_B07.g1_A029 Root cold Pinus... 120 5e-037
gb|DR020775.1|DR020775 STRS1_39_E10.b1_A034 Shoot tip pitch... 67 5e-037
gb|CX646672.1|CX646672 COLD1_10_G02.g1_A029 Root cold Pinus... 80 6e-037
gb|DR052296.1|DR052296 RTCA1_3_E07.g1_A029 Roots minus calc... 80 6e-037
gb|DR386769.1|DR386769 RTHG1_17_G09.b1_A029 Roots plus adde... 80 6e-037
gb|CX646593.1|CX646593 COLD1_10_G02.b1_A029 Root cold Pinus... 80 6e-037
gb|CO158751.1|CO158751 FLD1_9_B11.b1_A029 Root flooded Pinu... 80 6e-037
gb|DR386854.1|DR386854 RTHG1_17_G09.g1_A029 Roots plus adde... 80 6e-037
gb|CO164905.1|CO164905 FLD1_51_C02.b1_A029 Root flooded Pin... 80 6e-037
gb|DR016210.1|DR016210 STRS1_8_C05.g1_A034 Shoot tip pitch ... 80 6e-037
gb|CX651389.1|CX651389 COLD1_52_C01.b1_A029 Root cold Pinus... 77 6e-037
gb|CF400872.1|CF400872 RTWW1_8_H02.g1_A015 Well-watered lob... 80 6e-037
gb|DR177119.1|DR177119 RTMNUT1_3_F08.b1_A029 Roots minus mi... 67 6e-037
gb|CF665040.1|CF665040 RTCNT1_13_B05.g1_A029 Root control P... 120 7e-037
gb|DN614715.1|DN614715 EST967765 Subtracted pine embryo lib... 61 7e-037
gb|DR019550.1|DR019550 STRS1_30_G04.g1_A034 Shoot tip pitch... 65 7e-037
gb|DR018090.1|DR018090 STRS1_20_A04.g1_A034 Shoot tip pitch... 83 8e-037
gb|CO364892.1|CO364892 RTK1_22_A03.g1_A029 Roots minus pota... 67 1e-036
gb|DR099155.1|DR099155 STRR1_53_B10.g1_A033 Stem Response R... 73 1e-036
gb|CO364812.1|CO364812 RTK1_22_A03.b1_A029 Roots minus pota... 80 1e-036
gb|DR094127.1|DR094127 STRR1_12_D05.g1_A033 Stem Response R... 80 1e-036
gb|CO365925.1|CO365925 RTK1_20_C04.b1_A029 Roots minus pota... 71 2e-036
gb|CX650543.1|CX650543 COLD1_46_A01.g1_A029 Root cold Pinus... 71 2e-036
gb|CO161433.1|CO161433 FLD1_28_F07.g1_A029 Root flooded Pin... 67 2e-036
gb|DR167700.1|DR167700 RTPHOS1_20_B06.g1_A029 Roots minus p... 71 2e-036
gb|DR090334.1|DR090334 RTAL1_14_H01.b1_A029 Roots plus adde... 71 2e-036
gb|DR388706.1|DR388706 RTHG1_30_B04.b1_A029 Roots plus adde... 67 2e-036
gb|CF479061.1|CF479061 RTWW3_21_H03.g1_A022 Well-watered lo... 67 2e-036
gb|CV034435.1|CV034435 RTNACL1_40_H06.g1_A029 Roots plus ad... 71 2e-036
gb|CO370001.1|CO370001 RTK1_55_H10.g1_A029 Roots minus pota... 71 2e-036
gb|CF388215.1|CF388215 RTDR2_1_A12.g1_A021 Loblolly pine ro... 71 2e-036
gb|CF478331.1|CF478331 RTWW3_18_A11.g1_A022 Well-watered lo... 120 2e-036
gb|CF402040.1|CF402040 RTWW1_16_F12.g1_A015 Well-watered lo... 65 3e-036
gb|CF663333.1|CF663333 RTCNT1_2_F01.b1_A029 Root control Pi... 79 3e-036
gb|DR110885.1|DR110885 RTS1_13_F04.g1_A029 Roots minus sulf... 79 3e-036
gb|DR094825.1|DR094825 STRR1_17_B03.b1_A033 Stem Response R... 70 5e-036
gb|CF391811.1|CF391811 RTDR3_10_C10.b1_A022 Loblolly pine r... 66 5e-036
gb|DR016829.1|DR016829 STRS1_12_A06.g1_A034 Shoot tip pitch... 73 6e-036
gb|DR166815.1|DR166815 RTPHOS1_14_E01.g1_A029 Roots minus p... 66 6e-036
gb|CV036336.1|CV036336 RTNACL1_58_B10.g1_A029 Roots plus ad... 120 7e-036
gb|CO366211.1|CO366211 RTK1_26_B11.g1_A029 Roots minus pota... 77 9e-036
gb|CO165979.1|CO165979 FLD1_58_B01.g1_A029 Root flooded Pin... 68 1e-035
gb|CO411590.1|CO411590 EST841975 Sequencing ESTs from loblo... 65 1e-035
gb|DR017190.1|DR017190 STRS1_14_D06.g1_A034 Shoot tip pitch... 63 1e-035
gb|CX649818.1|CX649818 COLD1_41_E02.g1_A029 Root cold Pinus... 72 2e-035
gb|CO365861.1|CO365861 RTK1_19_E01.g1_A029 Roots minus pota... 72 2e-035
gb|CF671723.1|CF671723 RTCNT1_58_H03.g1_A029 Root control P... 72 2e-035
gb|DR181212.1|DR181212 RTMNUT1_37_B09.g2_A029 Roots minus m... 72 2e-035
gb|DR744995.1|DR744995 RTCU1_26_G03.b1_A029 Roots plus adde... 72 2e-035
gb|CF665923.1|CF665923 RTCNT1_19_A06.g1_A029 Root control P... 72 2e-035
gb|BX678243.1|BX678243 BX678243 RN Pinus pinaster cDNA clon... 69 2e-035
gb|CO164839.1|CO164839 FLD1_50_D08.g1_A029 Root flooded Pin... 65 2e-035
gb|CF475667.1|CF475667 RTWW2_11_A08.g1_A021 Well-watered lo... 68 2e-035
gb|CO197729.1|CO197729 GEO1_8_D08.g1_A029 Root gravitropism... 71 2e-035
gb|DR385763.1|DR385763 RTHG1_10_E09.g1_A029 Roots plus adde... 81 2e-035
gb|CO161877.1|CO161877 FLD1_31_F05.g1_A029 Root flooded Pin... 62 3e-035
gb|CF403089.1|CF403089 RTWW1_24_F04.g1_A015 Well-watered lo... 71 3e-035
gb|DR050470.1|DR050470 RTBOR1_23_E09.g1_A029 Roots plus add... 69 3e-035
gb|CO175874.1|CO175874 NDL1_57_E02.g1_A029 Needles control ... 81 3e-035
gb|CO165883.1|CO165883 FLD1_57_F09.g1_A029 Root flooded Pin... 77 4e-035
gb|DR692763.1|DR692763 EST1082851 Normalized pine embryo li... 63 6e-035
gb|DR054945.1|DR054945 RTCA1_20_C08.g1_A029 Roots minus cal... 80 6e-035
gb|DR098785.1|DR098785 STRR1_47_G08.g1_A033 Stem Response R... 80 6e-035
gb|DR079726.1|DR079726 RTFEPL1_17_D11.b1_A029 Roots plus ad... 75 8e-035
gb|CO200887.1|CO200887 RTCNT2_2_F01.b1_A029 Root control 2 ... 64 1e-034
gb|CO159581.1|CO159581 FLD1_14_B02.g1_A029 Root flooded Pin... 74 1e-034
gb|DR017052.1|DR017052 STRS1_13_F06.g1_A034 Shoot tip pitch... 73 1e-034
gb|CF474883.1|CF474883 RTWW2_8_F04.g1_A021 Well-watered lob... 74 1e-034
gb|CO167878.1|CO167878 FLD1_71_G07.g1_A029 Root flooded Pin... 74 1e-034
gb|CF386497.1|CF386497 RTDR1_14_C02.g1_A015 Loblolly pine r... 71 1e-034
dbj|BD224552.1| Materials and methods for the modification ... 79 1e-034
gb|DR109392.1|DR109392 RTS1_1_D12.g1_A029 Roots minus sulfu... 79 2e-034
gb|BX676904.1|BX676904 BX676904 RN Pinus pinaster cDNA clon... 74 2e-034
gb|CF399541.1|CF399541 RTDS3_26_A11.b1_A022 Drought-stresse... 93 3e-034
gb|DR109985.1|DR109985 RTS1_1_D12.b1_A029 Roots minus sulfu... 69 3e-034
gb|DR682260.1|DR682260 EST1072335 Normalized pine embryo li... 102 3e-034
gb|CF398327.1|CF398327 RTDS3_24_F10.g1_A022 Drought-stresse... 120 3e-034
gb|CO364109.1|CO364109 RTK1_13_F05.g1_A029 Roots minus pota... 83 4e-034
gb|CF477895.1|CF477895 RTWW3_13_H05.g1_A022 Well-watered lo... 62 4e-034
gb|CF402460.1|CF402460 RTWW1_17_A06.g1_A015 Well-watered lo... 69 4e-034
gb|CF667757.1|CF667757 RTCNT1_32_H01.b1_A029 Root control P... 69 4e-034
gb|DR058888.1|DR058888 RTNIT1_14_B05.g1_A029 Roots minus ni... 74 4e-034
gb|DR017778.1|DR017778 STRS1_18_A05.g1_A034 Shoot tip pitch... 93 4e-034
gb|BQ701814.1|BQ701814 NXSI_120_H03_F NXSI (Nsf Xylem Side ... 62 5e-034
gb|DR109614.1|DR109614 RTS1_3_B07.g1_A029 Roots minus sulfu... 72 7e-034
gb|CF385663.1|CF385663 RTDR1_5_A11.g1_A015 Loblolly pine ro... 71 1e-033
gb|DR102850.1|DR102850 STRR1_84_B05.g1_A033 Stem Response R... 67 1e-033
gb|DR016156.1|DR016156 STRS1_8_C05.b1_A034 Shoot tip pitch ... 80 1e-033
gb|CF665386.1|CF665386 RTCNT1_15_E09.g1_A029 Root control P... 84 1e-033
gb|CF387576.1|CF387576 RTDR1_20_A04.g1_A015 Loblolly pine r... 67 1e-033
gb|DR025204.1|DR025204 STRS1_70_F04.b1_A034 Shoot tip pitch... 70 2e-033
gb|CF672147.1|CF672147 RTCNT1_61_E03.g1_A029 Root control P... 69 2e-033
gb|DR099196.1|DR099196 STRR1_53_F12.g1_A033 Stem Response R... 65 2e-033
gb|DR098636.1|DR098636 STRR1_46_H03.g1_A033 Stem Response R... 96 2e-033
gb|DR019353.1|DR019353 STRS1_29_B01.g1_A034 Shoot tip pitch... 102 2e-033
gb|CR393357.1|CR393357 CR393357 RN Pinus pinaster cDNA clon... 68 2e-033
gb|DR098377.1|DR098377 STRR1_45_C10.b1_A033 Stem Response R... 62 2e-033
gb|CF476953.1|CF476953 RTWW3_4_G10.g1_A022 Well-watered lob... 72 2e-033
gb|CF669107.1|CF669107 RTCNT1_40_E05.g1_A029 Root control P... 73 2e-033
gb|DR688664.1|DR688664 EST1078749 Normalized pine embryo li... 102 2e-033
gb|BX681393.1|BX681393 BX681393 RS Pinus pinaster cDNA clon... 68 2e-033
gb|DR017704.1|DR017704 STRS1_18_A05.b1_A034 Shoot tip pitch... 100 3e-033
gb|DR012568.1|DR012568 HEAT1_13_E03.g1_A029 Root at 37 C fo... 73 3e-033
gb|DT630985.1|DT630985 EST1145916 Normalized pine embryo li... 102 3e-033
gb|DR166827.1|DR166827 RTPHOS1_14_F03.g1_A029 Roots minus p... 67 3e-033
gb|CF671888.1|CF671888 RTCNT1_60_A05.b1_A029 Root control P... 77 3e-033
gb|DR054873.1|DR054873 RTCA1_20_C08.b1_A029 Roots minus cal... 67 3e-033
gb|DR090620.1|DR090620 RTAL1_16_G09.b1_A029 Roots plus adde... 67 3e-033
gb|DR072085.1|DR072085 RTDK1_24_B05.b1_A029 Roots, dark Pin... 67 3e-033
gb|CF478836.1|CF478836 RTWW3_15_F06.g1_A022 Well-watered lo... 67 3e-033
gb|CF384952.1|CF384952 RTDR1_1_B07.b1_A015 Loblolly pine ro... 67 3e-033
gb|CF392395.1|CF392395 RTDR3_7_B06.g1_A022 Loblolly pine ro... 63 3e-033
gb|DR089676.1|DR089676 RTAL1_10_D10.b1_A029 Roots plus adde... 69 3e-033
gb|DR081814.1|DR081814 RTFEPL1_32_B12.g1_A029 Roots plus ad... 96 4e-033
gb|DR070948.1|DR070948 RTDK1_16_D02.g1_A029 Roots, dark Pin... 73 4e-033
gb|CF402571.1|CF402571 RTWW1_21_C11.g1_A015 Well-watered lo... 70 5e-033
gb|CF385187.1|CF385187 RTDR1_2_C03.g1_A015 Loblolly pine ro... 70 5e-033
gb|DR089697.1|DR089697 RTAL1_10_F08.b1_A029 Roots plus adde... 67 5e-033
gb|CO201226.1|CO201226 RTCNT2_4_A02.g1_A029 Root control 2 ... 97 6e-033
gb|CF388515.1|CF388515 RTDR2_3_F02.g1_A021 Loblolly pine ro... 69 6e-033
gb|CF399623.1|CF399623 RTDS3_25_E09.b1_A022 Drought-stresse... 64 6e-033
gb|CF476315.1|CF476315 RTWW2_22_C12.g1_A021 Well-watered lo... 67 6e-033
gb|DR078140.1|DR078140 RTFEPL1_2_D10.b1_A029 Roots plus add... 77 9e-033
gb|DR017843.1|DR017843 STRS1_18_G08.g1_A034 Shoot tip pitch... 81 9e-033
gb|CF666458.1|CF666458 RTCNT1_23_A08.g1_A029 Root control P... 65 9e-033
gb|CV035963.1|CV035963 RTNACL1_43_E04.g1_A029 Roots plus ad... 80 1e-032
gb|DR015519.1|DR015519 STRS1_4_B03.b1_A034 Shoot tip pitch ... 70 1e-032
gb|CO171802.1|CO171802 NDL1_24_E05.g1_A029 Needles control ... 116 1e-032
gb|DR163463.1|DR163463 RTFE1_43_C04.b1_A029 Roots minus iro... 75 1e-032
gb|DR021011.1|DR021011 STRS1_40_F08.g1_A034 Shoot tip pitch... 66 1e-032
gb|CO365129.1|CO365129 RTK1_23_G04.g1_A029 Roots minus pota... 71 2e-032
gb|CF386285.1|CF386285 RTDR1_13_E11.g1_A015 Loblolly pine r... 71 2e-032
gb|DR055365.1|DR055365 RTCA1_23_F04.b1_A029 Roots minus cal... 71 2e-032
gb|CF477599.1|CF477599 RTWW3_8_F03.g1_A022 Well-watered lob... 71 2e-032
gb|CO199477.1|CO199477 GEO2_1_A09.g1_A032 Root gravitropism... 68 2e-032
gb|DR016727.1|DR016727 STRS1_11_G02.g1_A034 Shoot tip pitch... 73 2e-032
gb|CO161841.1|CO161841 FLD1_31_B09.g1_A029 Root flooded Pin... 73 2e-032
gb|DR095236.1|DR095236 STRR1_19_E06.g1_A033 Stem Response R... 56 2e-032
gb|DR052158.1|DR052158 RTCA1_2_F12.g1_A029 Roots minus calc... 73 2e-032
gb|DR690397.1|DR690397 EST1080483 Normalized pine embryo li... 71 2e-032
gb|CO369083.1|CO369083 RTK1_44_G07.g1_A029 Roots minus pota... 65 2e-032
gb|CV036319.1|CV036319 RTNACL1_58_H07.b1_A029 Roots plus ad... 65 2e-032
gb|DR011877.1|DR011877 HEAT1_8_B03.g1_A029 Root at 37 C for... 65 2e-032
gb|DR388727.1|DR388727 RTHG1_30_D05.b1_A029 Roots plus adde... 66 2e-032
gb|DR744454.1|DR744454 RTCU1_22_C07.g1_A029 Roots plus adde... 66 2e-032
gb|DR019654.1|DR019654 STRS1_31_B07.g1_A034 Shoot tip pitch... 66 2e-032
gb|DR052270.1|DR052270 RTCA1_3_B12.g1_A029 Roots minus calc... 69 3e-032
gb|DR096872.1|DR096872 STRR1_31_A01.b1_A033 Stem Response R... 71 3e-032
gb|DR061033.1|DR061033 RTNIT1_31_D08.g1_A029 Roots minus ni... 73 3e-032
gb|DR090469.1|DR090469 RTAL1_15_F06.b1_A029 Roots plus adde... 71 4e-032
gb|CO198153.1|CO198153 GEO1_11_D08.g1_A029 Root gravitropis... 69 4e-032
gb|CO167149.1|CO167149 FLD1_67_D11.b1_A029 Root flooded Pin... 80 6e-032
gb|DR179563.1|DR179563 RTMNUT1_23_A02.b2_A029 Roots minus m... 63 6e-032
gb|CX653299.1|CX653299 COLD1_64_E06.g1_A029 Root cold Pinus... 74 6e-032
gb|CR393291.1|CR393291 CR393291 RN Pinus pinaster cDNA clon... 70 6e-032
gb|CO160524.1|CO160524 FLD1_21_C12.g1_A029 Root flooded Pin... 67 6e-032
gb|CO369379.1|CO369379 RTK1_46_E11.g1_A029 Roots minus pota... 65 8e-032
gb|CO173926.1|CO173926 NDL1_40_A08.g1_A029 Needles control ... 116 8e-032
gb|CX716017.1|CX716017 RTPQ1_39_D06.g1_A032 Roots treated w... 70 8e-032
gb|CF470435.1|CF470435 RTDS1_17_F06.g1_A015 Drought-stresse... 67 1e-031
gb|DR098171.1|DR098171 STRR1_39_C08.g1_A033 Stem Response R... 66 1e-031
gb|DR178242.1|DR178242 RTMNUT1_10_G05.b1_A029 Roots minus m... 72 1e-031
gb|DR056948.1|DR056948 RTNIT1_1_D03.g1_A029 Roots minus nit... 59 1e-031
gb|DR012184.1|DR012184 HEAT1_10_F10.g1_A029 Root at 37 C fo... 70 1e-031
gb|CR392474.1|CR392474 CR392474 RN Pinus pinaster cDNA clon... 82 1e-031
gb|BX679095.1|BX679095 BX679095 RS Pinus pinaster cDNA clon... 65 1e-031
gb|CO364288.1|CO364288 RTK1_14_G07.g1_A029 Roots minus pota... 77 1e-031
gb|DR050073.1|DR050073 RTBOR1_21_D02.b1_A029 Roots plus add... 104 1e-031
gb|BX679939.1|BX679939 BX679939 RS Pinus pinaster cDNA clon... 89 1e-031
gb|BX675142.1|BX675142 BX675142 RN Pinus pinaster cDNA clon... 138 1e-031
gb|BX678208.1|BX678208 BX678208 RN Pinus pinaster cDNA clon... 138 1e-031
gb|CF667641.1|CF667641 RTCNT1_31_D05.g1_A029 Root control P... 65 1e-031
gb|DR161649.1|DR161649 RTFE1_13_C09.b1_A029 Roots minus iro... 104 2e-031
gb|CO167173.1|CO167173 FLD1_67_H01.b1_A029 Root flooded Pin... 67 3e-031
gb|CF386338.1|CF386338 RTDR1_13_E09.g1_A015 Loblolly pine r... 102 3e-031
gb|DR096972.1|DR096972 STRR1_31_D02.g1_A033 Stem Response R... 104 3e-031
gb|CF385526.1|CF385526 RTDR1_4_H07.g1_A015 Loblolly pine ro... 104 3e-031
gb|DR088951.1|DR088951 RTAL1_5_E01.g1_A029 Roots plus added... 61 3e-031
gb|DR021429.1|DR021429 STRS1_44_C12.g1_A034 Shoot tip pitch... 61 3e-031
gb|DR102130.1|DR102130 STRR1_78_D11.g1_A033 Stem Response R... 83 4e-031
gb|DN462107.1|DN462107 EST957906 Sequencing ESTs from loblo... 65 4e-031
gb|DR101898.1|DR101898 STRR1_76_C09.g1_A033 Stem Response R... 90 4e-031
gb|CO172748.1|CO172748 NDL1_31_D06.g1_A029 Needles control ... 61 4e-031
gb|DR012489.1|DR012489 HEAT1_13_E03.b1_A029 Root at 37 C fo... 73 4e-031
gb|CO161405.1|CO161405 FLD1_28_C11.g1_A029 Root flooded Pin... 80 5e-031
gb|DR057812.1|DR057812 RTNIT1_8_A09.b1_A029 Roots minus nit... 68 5e-031
gb|CF394286.1|CF394286 RTDS2_4_D09.g1_A021 Drought-stressed... 79 5e-031
gb|CF474861.1|CF474861 RTWW2_8_B09.g1_A021 Well-watered lob... 61 6e-031
gb|DR015946.1|DR015946 STRS1_6_E05.g1_A034 Shoot tip pitch ... 70 6e-031
gb|CO163808.1|CO163808 FLD1_43_H11.g1_A029 Root flooded Pin... 67 7e-031
gb|DR070887.1|DR070887 RTDK1_16_E10.b1_A029 Roots, dark Pin... 65 7e-031
gb|DR050713.1|DR050713 RTBOR1_25_F03.b1_A029 Roots plus add... 67 7e-031
gb|DT635728.1|DT635728 EST1150659 Normalized pine embryo li... 104 7e-031
gb|DR025482.1|DR025482 STRS1_71_H02.g1_A034 Shoot tip pitch... 104 7e-031
gb|DR094742.1|DR094742 STRR1_16_B03.g1_A033 Stem Response R... 56 8e-031
gb|CV145607.1|CV145607 EST856816 Sequencing ESTs from loblo... 65 9e-031
gb|DT624624.1|DT624624 EST1158959 Sequencing ESTs from lobl... 65 9e-031
gb|DT624683.1|DT624683 EST1159018 Sequencing ESTs from lobl... 65 9e-031
gb|CV144839.1|CV144839 EST856048 Sequencing ESTs from loblo... 65 9e-031
gb|CO365673.1|CO365673 RTK1_18_B06.g1_A029 Roots minus pota... 65 9e-031
gb|CF476619.1|CF476619 RTWW3_2_E11.g1_A022 Well-watered lob... 73 9e-031
gb|DR052199.1|DR052199 RTCA1_3_B12.b1_A029 Roots minus calc... 69 1e-030
gb|CF479871.1|CF479871 RTWW3_12_F05.g1_A022 Well-watered lo... 61 1e-030
gb|DR025291.1|DR025291 STRS1_70_F04.g1_A034 Shoot tip pitch... 70 1e-030
gb|CO201333.1|CO201333 RTCNT2_5_C07.b1_A029 Root control 2 ... 68 1e-030
gb|CF670391.1|CF670391 RTCNT1_49_H09.g1_A029 Root control P... 66 1e-030
gb|BQ699222.1|BQ699222 NXRV121_A06_F NXRV (Nsf Xylem Root w... 75 1e-030
gb|CO366240.1|CO366240 RTK1_26_E06.g1_A029 Roots minus pota... 61 1e-030
emb|AJ251254.1|PPI251254 Pinus pinaster partial mRNA for pe... 68 1e-030
gb|DR094945.1|DR094945 STRR1_17_F11.g1_A033 Stem Response R... 76 2e-030
gb|CF385702.1|CF385702 RTDR1_5_C11.g1_A015 Loblolly pine ro... 102 2e-030
gb|DR069696.1|DR069696 RTDK1_8_H07.g1_A029 Roots, dark Pinu... 73 2e-030
gb|CO164811.1|CO164811 FLD1_50_A12.g1_A029 Root flooded Pin... 67 2e-030
gb|DR742794.1|DR742794 RTCU1_7_C01.b2_A029 Roots plus added... 66 3e-030
gb|DR100118.1|DR100118 STRR1_61_G12.g1_A033 Stem Response R... 63 3e-030
gb|DR079676.1|DR079676 RTFEPL1_12_G05.g1_A029 Roots plus ad... 75 4e-030
gb|DR097295.1|DR097295 STRR1_33_F08.g3_A033 Stem Response R... 77 4e-030
gb|DR112423.1|DR112423 RTS1_28_D01.b1_A029 Roots minus sulf... 67 4e-030
gb|DR687396.1|DR687396 EST1077478 Normalized pine embryo li... 102 5e-030
gb|DR050687.1|DR050687 RTBOR1_25_C07.b1_A029 Roots plus add... 71 6e-030
gb|DN612328.1|DN612328 EST965378 Subtracted pine embryo lib... 61 6e-030
gb|DN612333.1|DN612333 EST965383 Subtracted pine embryo lib... 61 6e-030
gb|BG040407.1|BG040407 NXSI_107_H09_F NXSI (Nsf Xylem Side ... 66 6e-030
gb|DR092596.1|DR092596 STRR1_2_A03.g1_A033 Stem Response Re... 69 6e-030
gb|DR061148.1|DR061148 RTNIT1_32_H07.b1_A029 Roots minus ni... 71 8e-030
gb|CF670585.1|CF670585 RTCNT1_51_E09.b1_A029 Root control P... 71 8e-030
gb|CF386788.1|CF386788 RTDR1_16_G03.g1_A015 Loblolly pine r... 72 8e-030
gb|CO167565.1|CO167565 FLD1_69_E12.g1_A029 Root flooded Pin... 60 9e-030
gb|DR080434.1|DR080434 RTFEPL1_22_D07.g1_A029 Roots plus ad... 71 9e-030
gb|DR060690.1|DR060690 RTNIT1_29_H11.b1_A029 Roots minus ni... 82 9e-030
gb|CF667845.1|CF667845 RTCNT1_32_H01.g1_A029 Root control P... 82 9e-030
gb|CF670595.1|CF670595 RTCNT1_51_F09.b1_A029 Root control P... 71 1e-029
gb|DR162792.1|DR162792 RTFE1_20_C02.g1_A029 Roots minus iro... 73 1e-029
gb|DR094872.1|DR094872 STRR1_17_G08.b1_A033 Stem Response R... 66 1e-029
gb|DR099813.1|DR099813 STRR1_58_F12.g1_A033 Stem Response R... 63 1e-029
>gb|DR024613.1|DR024613 STRS1_66_E01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_66_E01_A034 3', mRNA sequence
Length = 847
Score = 87.2 bits (184), Expect(4) = 3e-066
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +2 / -1
Query: 515 VSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRS 694
+S+D+P+GR DG S AS+ L PP N++ L FA KG+S E++V+LSGAHT+G S
Sbjct: 451 LSWDVPAGRRDGRISRASDIAGNLPPPFLNVTQLTQFFAAKGLSQEEMVILSGAHTIGVS 272
Query: 695 HCSSFGS 715
HCSSF S
Sbjct: 271 HCSSFVS 251
Score = 78.0 bits (164), Expect(4) = 3e-066
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = +2 / -1
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
L +G+YR++CP AE+IV ++ A +N G +IRM FHDCFV GCD SVL+D T
Sbjct: 802 LTVGFYRWSCPAAESIVFEAVRTAYMKNSGVAPGLIRMHFHDCFVRGCDGSVLIDST 632
Score = 76.2 bits (160), Expect(4) = 3e-066
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = +2 / -1
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
T EK + NNPSL GFE+IDA K LE CP VSCADI+AFAARD++
Sbjct: 622 TAEKDSPANNPSLHGFEVIDAAKSRLEVVCPNTVSCADILAFAARDSA 479
Score = 69.3 bits (145), Expect(4) = 3e-066
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +2 / -1
Query: 740 INPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSP 919
++P A L+ RCP + ++ TV ++VTPN +DN YY + LFTSDAALLT P
Sbjct: 208 LDPNYANILKARCPQGSPSNVKTTVPMEIVTPNTLDNVYYDELKRKHGLFTSDAALLTDP 29
Query: 920 ETAKLVLDN 946
T +V N
Sbjct: 28 NTNNVVNAN 2
Score = 55.1 bits (114), Expect(4) = 4e-032
Identities = 29/62 (46%), Positives = 34/62 (54%)
Frame = -3 / +3
Query: 705 EEQWERPTVCAPERTTRSSSDMPLTAKLEARSLRLDVGGTRNLTDSEALEKVPSRRPDGM 526
EEQ + P VCAPE T SS D PL AK + GG + SEA E +PS RP G
Sbjct: 261 EEQ*DTPIVCAPESMTISSCDRPLAAKNWVNCVTFKNGGGKFPAISEAREILPSLRPAGT 440
Query: 525 SK 520
S+
Sbjct: 441 SQ 446
Score = 53.8 bits (111), Expect(4) = 4e-032
Identities = 27/46 (58%), Positives = 28/46 (60%)
Frame = -3 / +3
Query: 486 SRAAKAMMSAQETTPGHAASRASLMASISSNPRRLGLLGAASFSGV 349
S AA A MSAQET G S ASI+SNP RLGLL SFS V
Sbjct: 486 SLAANARMSAQETVFGQTTSNLDFAASITSNP*RLGLLAGLSFSAV 623
Score = 45.5 bits (93), Expect(4) = 4e-032
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = -3 / +3
Query: 345 LNGVGSRSTEASQPSTKQSWKSMRMTAAPLPGF*AMAFSMLALTIASAWGQV*R*YPS 172
L V S T+ S P TKQSWK +RM+ P F A + T+ SA GQ+ R* P+
Sbjct: 624 LLAVESMRTDPSHPLTKQSWKCIRMSPGATPLFFMYAVRTASNTMDSAAGQLQR*KPT 797
Score = 40.5 bits (82), Expect(4) = 4e-032
Identities = 28/64 (43%), Positives = 33/64 (51%)
Frame = -3 / +3
Query: 936 TNLAVSGDVRSAASEVKSTVCESTFL*YWLSMALGVTTSCITVGSSLVVVLAGQRVLRKA 757
T L V G V AASEV + + *Y LS LGVT S TV +L+ + GQR L
Sbjct: 12 TTLLVFGSVSRAASEVNNPCFLLSSS*YTLSRVLGVTISMGTVVFTLLGLPWGQRALSML 191
Query: 756 ASAG 745
A G
Sbjct: 192 A*LG 203
>gb|DR060871.1|DR060871 RTNIT1_30_C05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_30_C05_A029 5', mRNA sequence
Length = 777
Score = 87.2 bits (184), Expect(4) = 4e-064
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +2 / +3
Query: 515 VSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRS 694
+S+D+P+GR DG S AS+ L PP N++ L FA KG+S E++V+LSGAHT+G S
Sbjct: 360 LSWDVPAGRRDGRISRASDIAGNLPPPFLNVTQLTQFFAAKGLSQEEMVILSGAHTIGVS 539
Query: 695 HCSSFGS 715
HCSSF S
Sbjct: 540 HCSSFVS 560
Score = 78.0 bits (164), Expect(4) = 4e-064
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = +2 / +3
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
L +G+YR++CP AE+IV ++ A +N G +IRM FHDCFV GCD SVL+D T
Sbjct: 9 LTVGFYRWSCPAAESIVFEAVRAAYMKNSGVAPGLIRMHFHDCFVRGCDGSVLIDST 179
Score = 76.2 bits (160), Expect(4) = 4e-064
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = +2 / +3
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
T EK + NNPSL GFE+IDA K LE CP VSCADI+AFAARD++
Sbjct: 189 TAEKDSPANNPSLHGFEVIDAAKSRLEVVCPNTVSCADILAFAARDST 332
Score = 62.0 bits (129), Expect(4) = 4e-064
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2 / +3
Query: 740 INPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLT 913
++P A L+ RCP + ++ TV ++VTPN +DN YY + LFTSDAALLT
Sbjct: 603 LDPNYANILKARCPQGSPSNVKTTVPMEIVTPNTLDNVYYDELKRKHGLFTSDAALLT 776
Score = 55.1 bits (114), Expect(4) = 7e-030
Identities = 29/62 (46%), Positives = 34/62 (54%)
Frame = -3 / -3
Query: 705 EEQWERPTVCAPERTTRSSSDMPLTAKLEARSLRLDVGGTRNLTDSEALEKVPSRRPDGM 526
EEQ + P VCAPE T SS D PL AK + GG + SEA E +PS RP G
Sbjct: 550 EEQ*DTPIVCAPESMTISSCDRPLAAKNWVNCVTFKNGGGKFPAISEAREILPSLRPAGT 371
Query: 525 SK 520
S+
Sbjct: 370 SQ 365
Score = 53.8 bits (111), Expect(4) = 7e-030
Identities = 27/46 (58%), Positives = 28/46 (60%)
Frame = -3 / -3
Query: 486 SRAAKAMMSAQETTPGHAASRASLMASISSNPRRLGLLGAASFSGV 349
S AA A MSAQET G S ASI+SNP RLGLL SFS V
Sbjct: 325 SLAANARMSAQETVFGQTTSNLDFAASITSNP*RLGLLAGLSFSAV 188
Score = 45.1 bits (92), Expect(4) = 7e-030
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = -3 / -3
Query: 345 LNGVGSRSTEASQPSTKQSWKSMRMTAAPLPGF*AMAFSMLALTIASAWGQV*R*YPS 172
L V S T+ S P TKQSWK +RM+ P F A + T+ SA GQ+ R* P+
Sbjct: 187 LLAVESMRTDPSHPLTKQSWKCIRMSPGATPLFFMYAARTASNTMDSAAGQLQR*KPT 14
Score = 33.1 bits (66), Expect(4) = 7e-030
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = -3 / -3
Query: 912 VRSAASEVKSTVCESTFL*YWLSMALGVTTSCITVGSSLVVVLAGQRVLRKAASAG 745
V AASEV + + *Y LS LGVT S TV +L+ + GQR L A G
Sbjct: 775 VSRAASEVNNPCFLLSSS*YTLSRVLGVTISMGTVVFTLLGLPWGQRALSMLA*LG 608
>gb|CO161849.1|CO161849 FLD1_31_C06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_31_C06_A029 5', mRNA sequence
Length = 888
Score = 82.6 bits (174), Expect(4) = 6e-062
Identities = 34/68 (50%), Positives = 49/68 (72%)
Frame = +2 / +2
Query: 506 QGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTV 685
Q + +++P+GR DG S ASE + + PT N+S L SFA KG+S +D+V+LSGAH++
Sbjct: 350 QCPLGWNVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSI 529
Query: 686 GRSHCSSF 709
G SHC+SF
Sbjct: 530 GVSHCTSF 553
Score = 74.8 bits (157), Expect(4) = 6e-062
Identities = 29/66 (43%), Positives = 43/66 (65%)
Frame = +2 / +2
Query: 740 INPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSP 919
++P AA L+ +CP + +++ TV D++TP +DN YY +L+ LFTSD ALLT P
Sbjct: 602 LDPKYAALLKEKCPQGSPSNNITTVFMDIITPETLDNLYYDGLLNKHGLFTSDVALLTDP 781
Query: 920 ETAKLV 937
TA +V
Sbjct: 782 NTATVV 799
Score = 72.5 bits (152), Expect(4) = 6e-062
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2 / +2
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
T EK + NNPSL GF++ID K LE CP VSCADI+AFAARD++
Sbjct: 188 TAEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDSA 331
Score = 66.1 bits (138), Expect(4) = 6e-062
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +2 / +2
Query: 176 GYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
G+Y Y+CP+AE+ V + A + +IRM FHDCFV GCD SVL+D T
Sbjct: 17 GFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDST 178
>gb|DR079785.1|DR079785 RTFEPL1_17_D11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_17_D11_A029 5', mRNA sequence
Length = 783
Score = 83.1 bits (175), Expect(4) = 7e-060
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +2 / +1
Query: 506 QGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTV 685
Q + +D+P+GR DG S ASE + + PT N++ L SFA KG+S D+V+LSGAH++
Sbjct: 361 QYPLGWDVPAGRRDGIISLASEVLTNIPAPTFNVNQLTQSFASKGLSQNDMVILSGAHSI 540
Query: 686 GRSHCSSF 709
G SHC+SF
Sbjct: 541 GVSHCTSF 564
Score = 72.1 bits (151), Expect(4) = 7e-060
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2 / +1
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
T EK + NNPSL GF++ID K LE CP VSCADI+AFAARD++
Sbjct: 199 TAEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADILAFAARDSA 342
Score = 70.7 bits (148), Expect(4) = 7e-060
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +2 / +1
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
LE+G+Y Y+CP+AE+ V + A + +IRM FHDCFV GCD SVL+D T
Sbjct: 19 LEVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDST 189
Score = 63.4 bits (132), Expect(4) = 7e-060
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +2 / +1
Query: 740 INPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALL 910
++P AA L+ +CP + +++ TV D++TP +DN YY +L+ LFTSD ALL
Sbjct: 613 LDPKYAALLKEKCPQGSPSNNITTVFMDIITPETLDNLYYDGLLNKHGLFTSDVALL 783
>dbj|BD224562.1| Materials and methods for the modification of plant lignin content
Length = 1171
Score = 77.1 bits (162), Expect(4) = 1e-058
Identities = 38/110 (34%), Positives = 53/110 (48%)
Frame = +2 / +1
Query: 734 SDINPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLT 913
++I+ A A LR++CP+ T + D D +TP D YY ++ S L SD L
Sbjct: 682 TNIDSAYATSLRSKCPSTTGSGDSNLSPLDYMTPTVFDKNYYSDLKSQKGLLHSDQELFN 861
Query: 914 SPETAKLVLDNAKIPGWWEDKFEKAMVKMASLEVKTGHQGQVRKNCRAIN 1063
T V A + F AMVKM +++ TG GQ+ KNCR N
Sbjct: 862 GGSTDSQVTTYASNQNTFFSDFAAAMVKMGNIKPLTGTSGQIPKNCRKPN 1011
Score = 71.6 bits (150), Expect(4) = 1e-058
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = +2 / +1
Query: 179 YYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD 331
+Y +CP A ++VKA++++A+A GA+++R+ FHDCFV GCD SVLLD
Sbjct: 139 FYDKSCPTALSVVKAAVKQAVANEKRMGASLLRLHFHDCFVNGCDGSVLLD 291
Score = 70.3 bits (147), Expect(4) = 1e-058
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +2 / +1
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A PN S RGF++ID IK +E AC GVVSCADI+A AARD+
Sbjct: 307 TGEKTANPNANSARGFDVIDTIKSNVEKACSGVVSCADILAIAARDS 447
Score = 65.7 bits (137), Expect(4) = 1e-058
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +2 / +1
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+ + GR D T ++ S + + PPTS+LS+L S F +G+S +++V LSG HT+G
Sbjct: 460 GGPSWTVMLGRRDSTTASKSGANSNIPPPTSSLSNLISLFQAQGLSAKEMVALSGGHTIG 639
Query: 689 RSHCSSF 709
++ C +F
Sbjct: 640 QAQCKNF 660
>gb|CF389670.1|CF389670 RTDR2_8_D11.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_8_D11_A021 5', mRNA
sequence
Length = 768
Score = 84.9 bits (179), Expect(4) = 4e-056
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +2 / +2
Query: 506 QGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTV 685
Q + +D+P+GR DG S ASE + + PT N+S L SFA KG+S +D+V+LSGAH++
Sbjct: 236 QCPLGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSI 415
Query: 686 GRSHCSSF 709
G SHC+SF
Sbjct: 416 GVSHCTSF 439
Score = 76.7 bits (161), Expect(4) = 4e-056
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +2 / +2
Query: 740 INPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSP 919
++P AA L+ +CP + +++ TV D++TP +DN YY +L+ LFTSDAALLT P
Sbjct: 488 LDPKYAALLKEKCPQGSPSNNITTVFMDIITPETLDNLYYDGLLNKHGLFTSDAALLTDP 667
Query: 920 ETAKLV 937
TA +V
Sbjct: 668 NTATVV 685
Score = 72.5 bits (152), Expect(4) = 4e-056
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2 / +2
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
T EK + NNPSL GF++ID K LE CP VSCADI+AFAARD++
Sbjct: 74 TAEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDSA 217
Score = 42.3 bits (86), Expect(4) = 4e-056
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 278 MLFHDCFVEGCDASVLLDPT 337
M FHDCFV GCD SVL+D T
Sbjct: 5 MHFHDCFVRGCDGSVLIDST 64
>gb|CF388014.1|CF388014 RTDR1_17_B01.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_17_B01_A015 5', mRNA
sequence
Length = 763
Score = 85.8 bits (181), Expect(4) = 7e-056
Identities = 35/65 (53%), Positives = 48/65 (73%)
Frame = +2 / +2
Query: 515 VSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRS 694
+S+D+P+GR DG S ASE + PT N+S L SFA KG+S +D+V+LSGAH++G S
Sbjct: 344 LSWDVPAGRRDGIISLASEVATNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVS 523
Query: 695 HCSSF 709
HC+SF
Sbjct: 524 HCTSF 538
Score = 73.5 bits (154), Expect(4) = 7e-056
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = +2 / +2
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGK 514
T EK + NNPSL G+++ID K LEA CP VSCADI+AFAARD++ S K
Sbjct: 173 TAEKDSPVNNPSLHGYDVIDTAKSRLEAICPNTVSCADILAFAARDSTKLASPHK 337
Score = 60.2 bits (125), Expect(4) = 7e-056
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +2 / +2
Query: 176 GYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD 331
G+Y ++CP AE+ V + A ++ +IRM FHDCFV GCD SVL+D
Sbjct: 2 GFYDHSCP*AESTVFEVVRDAFLKSREVAPGLIRMHFHDCFVRGCDGSVLID 157
Score = 56.1 bits (116), Expect(4) = 7e-056
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +2 / +2
Query: 740 INPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLT 913
++P LA L+ +CP + +++ TV D TP +DN YY +L LFTS LLT
Sbjct: 587 LDPMLADILKKKCPQGSPSNNITTVFMDTYTPETIDNLYYNGLLEKHGLFTSRCTLLT 760
>gb|CX652846.1|CX652846 COLD1_61_G11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_61_G11_A029 5', mRNA sequence
Length = 909
Score = 129 bits (276), Expect(3) = 1e-055
Identities = 57/113 (50%), Positives = 70/113 (61%)
Frame = +2 / +2
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFS 346
L +GYY+ CP AE IV ++ A +P A +IR+ FHDCFV GCD SVL+D
Sbjct: 158 LAVGYYKNICPAAEPIVLGVVKSAFHSSPEIAAKLIRLHFHDCFVRGCDGSVLIDSISGQ 337
Query: 347 PTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLS 505
EK + NNPSL GF +ID K LE CP VSCADI+AFAARD++ S
Sbjct: 338 FVAEKDSPANNPSLGGFNVIDNAKTLLEKICPKKVSCADIVAFAARDSAFLAS 496
Score = 81.3 bits (171), Expect(3) = 1e-055
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +2 / +2
Query: 521 FDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHC 700
+D+P+GR DG S AS L PPT N++ L FA KG+S +++V LSGAHT+G SHC
Sbjct: 518 WDVPAGRKDGNISLASNIPGNLPPPTFNVTQLTQIFATKGLSQDEMVTLSGAHTIGVSHC 697
Query: 701 SSFGS 715
+SF S
Sbjct: 698 TSFVS 712
Score = 46.4 bits (95), Expect(3) = 1e-055
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2 / +2
Query: 740 INPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFT 892
++P+ A L+ +CP + + + TV+ D TP +DN YY +V++ LFT
Sbjct: 755 LDPSYAQKLKQKCPQGSPNNANTTVVMDPETPFILDNLYYNDVIAKRGLFT 907
>gb|CO364127.1|CO364127 RTK1_13_G11.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_13_G11_A029 5', mRNA sequence
Length = 829
Score = 84.9 bits (179), Expect(4) = 1e-054
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +2 / +2
Query: 506 QGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTV 685
Q + +D+P+GR DG S ASE + + PT N+S L SFA KG+S +D+V+LSGAH++
Sbjct: 164 QCPLGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSI 343
Query: 686 GRSHCSSF 709
G SHC+SF
Sbjct: 344 GVSHCTSF 367
Score = 76.7 bits (161), Expect(4) = 1e-054
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +2 / +2
Query: 740 INPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSP 919
++P AA L+ +CP + +++ TV D++TP +DN YY +L+ LFTSDAALLT P
Sbjct: 416 LDPKYAALLKEKCPQGSPSNNITTVFMDIITPETLDNLYYDGLLNKHGLFTSDAALLTDP 595
Query: 920 ETAKLV 937
TA +V
Sbjct: 596 NTAAVV 613
Score = 71.2 bits (149), Expect(4) = 1e-054
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2 / +2
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
T EK + NNPSL GF++ID K LE CP VSCADI+AFAARD++
Sbjct: 2 TAEKDSIVNNPSLHGFDVIDNAKSRLETICPNTVSCADILAFAARDSA 145
Score = 38.6 bits (78), Expect(4) = 1e-054
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2 / +2
Query: 965 WEDKFEKAMVKMASLEVKTGHQGQVRKNCRAIN 1063
W+ F AMV M + TG++G++R+ C IN
Sbjct: 647 WQQNFAAAMVNMGMIIDLTGNEGEIRRKCSVIN 745
>gb|CX652982.1|CX652982 COLD1_62_E03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_E03_A029 5', mRNA sequence
Length = 796
Score = 89.5 bits (189), Expect(4) = 1e-054
Identities = 36/65 (55%), Positives = 49/65 (75%)
Frame = +2 / +2
Query: 515 VSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRS 694
+S+D+P+GR DG S ASE + + PT NLS L SFA KG+S E++++LSGAH++G S
Sbjct: 434 LSWDVPAGRRDGIISLASEVLTNIPAPTFNLSQLTQSFAAKGLSQEEMIILSGAHSIGVS 613
Query: 695 HCSSF 709
HCSSF
Sbjct: 614 HCSSF 628
Score = 71.6 bits (150), Expect(4) = 1e-054
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2 / +2
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
T EK + NNPSL GF++ID K LE CP VSCADI+AFAARD++
Sbjct: 263 TAEKDSPVNNPSLHGFDVIDRAKSRLETMCPNTVSCADILAFAARDSA 406
Score = 66.1 bits (138), Expect(4) = 1e-054
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +2 / +2
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFS 346
L++G+Y +CP+AE+ V + A + +IRM FHDCFV GCD S+L+D T S
Sbjct: 83 LKVGFYNCSCPEAESTVFEVVRDAFLDSREVAPGLIRMHFHDCFVRGCDGSILIDSTATS 262
Score = 44.1 bits (90), Expect(4) = 1e-054
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2 / +2
Query: 713 SDRLDGPSDINPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYY 859
S + I+P A L+ +CP + +++ TV +++TP +DN YY
Sbjct: 650 SSTIQTDPSIDPQYAGLLKEKCPQGSPSNNITTVFMNIITPETLDNLYY 796
>gb|DR688340.1|DR688340 EST1078424 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC513 3' end, mRNA sequence
Length = 936
Score = 79.9 bits (168), Expect(4) = 4e-053
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +2 / +2
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A PNN SLRGF+ +D IK LEAAC GVVSCADI+A AARD+
Sbjct: 281 TGEKTAKPNNNSLRGFDAVDTIKSQLEAACSGVVSCADIVAIAARDS 421
Score = 78.0 bits (164), Expect(4) = 4e-053
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +2 / +2
Query: 143 CQASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASV 322
C + Y L G+Y +CP +IV + +++AIAQ GA+++R+ FHDCFV GCD SV
Sbjct: 77 CSPAIYGQLSSGFYNQSCPNVLSIVNSVVQQAIAQEKRMGASLLRLHFHDCFVNGCDGSV 256
Query: 323 LLD 331
LLD
Sbjct: 257 LLD 265
Score = 70.7 bits (148), Expect(4) = 4e-053
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +2 / +2
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+ + GR D T ++ S + + PPTSNLS L SSF G+S +D+V L+G+HT+G
Sbjct: 434 GGPSWTVLLGRRDSTTASLSAANNLIPPPTSNLSALISSFGAVGLSPDDMVALAGSHTIG 613
Query: 689 RSHCSSF 709
++ C++F
Sbjct: 614 QARCTTF 634
Score = 37.7 bits (76), Expect(4) = 4e-053
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = +2 / +2
Query: 770 TRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSPETAKLVLDNA 949
T+ T D+ D++TP DN YY N+ S L SD L T V A
Sbjct: 686 TQANCPATGGDNNLASLDLLTPTVFDNNYYNNLKSQKGLLHSDQLLFNGSSTDTKVSFYA 865
Query: 950 KIP 958
P
Sbjct: 866 TYP 874
>gb|AF291667.1|AF291667 Pinus sylvestris class III peroxidase PSYP1 mRNA, complete cds
Length = 1294
Score = 80.3 bits (169), Expect(4) = 5e-053
Identities = 35/91 (38%), Positives = 53/91 (58%)
Frame = +2 / +3
Query: 791 TTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSPETAKLVLDNAKIPGWWE 970
T++ T D++TPN DN+YY N+L+ LFTSD + T T +V++ +
Sbjct: 813 TSTTVNTTNLDILTPNLFDNKYYVNLLNKKTLFTSDQSFYTDTRTQNIVINFEANQSLFF 992
Query: 971 DKFEKAMVKMASLEVKTGHQGQVRKNCRAIN 1063
+F +M+KM L+V TG QG++R NC A N
Sbjct: 993 HQFLLSMLKMGQLDVLTGSQGEIRNNCWASN 1085
Score = 68.9 bits (144), Expect(4) = 5e-053
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +2 / +3
Query: 551 TFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSF 709
TF+N S + L PTSN+++L S F KG++L DLV LSG HT+GR +CSSF
Sbjct: 561 TFANQSTVLANLPGPTSNVTELISFFDPKGLNLTDLVALSGGHTIGRGNCSSF 719
Score = 66.6 bits (139), Expect(4) = 5e-053
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +2 / +3
Query: 152 SPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD 331
+P L +Y TCP E+IV ME ++ + A ++R+ FHDCFV+GCD SVLL+
Sbjct: 174 TPVAGLSWTFYNTTCPSVESIVWQRMEVYLSADITQAAGLLRLHFHDCFVQGCDGSVLLN 353
Query: 332 PT 337
T
Sbjct: 354 ST 359
Score = 50.1 bits (103), Expect(4) = 5e-053
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2 / +3
Query: 389 RGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
+ ++I+ IK +EAAC G+VSCADI+A AARD+
Sbjct: 402 QALKIINDIKQNVEAACSGIVSCADIVALAARDS 503
>dbj|BD224564.1| Materials and methods for the modification of plant lignin content
Length = 1522
Score = 83.5 bits (176), Expect(4) = 1e-052
Identities = 36/91 (39%), Positives = 55/91 (60%)
Frame = +2 / +2
Query: 791 TTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSPETAKLVLDNAKIPGWWE 970
T++ T D+ TPN DN+YY ++L+ LFTSD L T T +V++ A +
Sbjct: 806 TSTTVNTTKLDIRTPNVFDNKYYVDLLNRQTLFTSDQTLYTDTRTRDIVINFAVNQSLFF 985
Query: 971 DKFEKAMVKMASLEVKTGHQGQVRKNCRAIN 1063
++F +M+KM L+V TG +G++RKNC A N
Sbjct: 986 EQFVLSMLKMGQLDVLTGSEGEIRKNCWAAN 1078
Score = 66.1 bits (138), Expect(4) = 1e-052
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +2 / +2
Query: 551 TFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSF 709
TF+N S + L PTSN++ L S KG++ DLV LSG HT+GRS+CSSF
Sbjct: 554 TFANRSTVLANLPSPTSNVTGLISVLGPKGLNFTDLVALSGGHTIGRSNCSSF 712
Score = 65.7 bits (137), Expect(4) = 1e-052
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +2 / +2
Query: 152 SPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD 331
SP L +Y +CP E+IV ME ++ + A ++R+ FHDCFV+GCD SVLL+
Sbjct: 167 SPVAGLSWTFYSSSCPSLESIVWERMEAYLSADITQAAGLLRLHFHDCFVQGCDGSVLLN 346
Query: 332 PT 337
T
Sbjct: 347 AT 352
Score = 49.2 bits (101), Expect(4) = 1e-052
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +2 / +2
Query: 389 RGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
+ ++I+ IK+ +EAAC G+VSCADI+ AARD+
Sbjct: 395 QALKIINDIKENVEAACSGIVSCADIVTLAARDS 496
>gb|DT631437.1|DT631437 EST1146368 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF876 3' end, mRNA sequence
Length = 933
Score = 84.9 bits (179), Expect(4) = 3e-052
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +2 / +3
Query: 506 QGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTV 685
Q + +D+P+GR DG S ASE + + PT N+S L SFA KG+S +D+V+LSGAH++
Sbjct: 525 QCPLGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSI 704
Query: 686 GRSHCSSF 709
G SHC+SF
Sbjct: 705 GVSHCTSF 728
Score = 72.5 bits (152), Expect(4) = 3e-052
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2 / +3
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
T EK + NNPSL GF++ID K LE CP VSCADI+AFAARD++
Sbjct: 363 TAEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDSA 506
Score = 70.7 bits (148), Expect(4) = 3e-052
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +2 / +3
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
LE+G+Y Y+CP+AE+ V + A + +IRM FHDCFV GCD SVL+D T
Sbjct: 183 LEVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDST 353
Score = 35.0 bits (70), Expect(4) = 3e-052
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2 / +3
Query: 740 INPALAAFLRTRCPANTTTSDDPTVMQDVVTP 835
++P AA L+ +CP + +++ TV D++TP
Sbjct: 777 LDPKYAALLKEKCPQGSPSNNITTVFMDIITP 872
>gb|DR163369.1|DR163369 RTFE1_42_B11.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_42_B11_A029 5', mRNA sequence
Length = 871
Score = 77.6 bits (163), Expect(4) = 6e-052
Identities = 37/110 (33%), Positives = 53/110 (48%)
Frame = +2 / +1
Query: 734 SDINPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLT 913
++I+ + LR++CP+ T + D D +TP D YY N+ S L SD L
Sbjct: 469 TNIDTMYSTSLRSKCPSTTGSGDSNLSPLDYMTPTVFDKNYYSNLKSKKGLLHSDQELFN 648
Query: 914 SPETAKLVLDNAKIPGWWEDKFEKAMVKMASLEVKTGHQGQVRKNCRAIN 1063
T V A + F AM+KM +++ TG GQ+RKNCR N
Sbjct: 649 GGSTDSQVSTYASNQNTFFSDFAAAMIKMGNIKPLTGTSGQIRKNCRKPN 798
Score = 72.5 bits (152), Expect(4) = 6e-052
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +2 / +1
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A PN S RGF++IDAIK +E AC GVVSCADI+A AARD+
Sbjct: 94 TGEKTAIPNANSARGFDVIDAIKSNVEKACSGVVSCADILAIAARDS 234
Score = 63.4 bits (132), Expect(4) = 6e-052
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +2 / +1
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+ + GR D T ++ S + + PPTS+LS L S F +G+S +++V L+G HT+G
Sbjct: 247 GGPSWTVMLGRRDSTTASKSGANNNIPPPTSSLSKLISLFQAQGLSAKEMVALAGGHTIG 426
Query: 689 RSHCSSF 709
++ C +F
Sbjct: 427 QAQCKNF 447
Score = 48.7 bits (100), Expect(4) = 6e-052
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +1
Query: 260 GAAVIRMLFHDCFVEGCDASVLLD 331
GA+++R+ FHDCFV GCD SVLLD
Sbjct: 7 GASLLRLHFHDCFVNGCDGSVLLD 78
>gb|DR019354.1|DR019354 STRS1_29_B03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_29_B03_A034 5', mRNA sequence
Length = 765
Score = 92.7 bits (196), Expect(3) = 2e-051
Identities = 37/70 (52%), Positives = 49/70 (70%)
Frame = +2 / +2
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFS 346
L++GYYR CP+AEAIV A++ KA+ NPG A+IRM FHDCFV GCD S+L+D T +
Sbjct: 224 LKVGYYRDRCPEAEAIVGAAVAKAVTANPGVAPALIRMHFHDCFVRGCDGSILIDSTAGN 403
Query: 347 PTPEKLAAPN 376
++ A N
Sbjct: 404 QAEKESPANN 433
Score = 76.7 bits (161), Expect(3) = 2e-051
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = +2 / +2
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G + +++P+GR DG S AS+ + P N++ L +FA K +S+ED+V LSGAH++G
Sbjct: 557 GGLIWEVPAGRRDGRISRASDIPGNIPAPQFNVNQLTQNFAAKFLSVEDMVTLSGAHSIG 736
Query: 689 RSHCSSFGS 715
SHCSSF +
Sbjct: 737 VSHCSSFSA 763
Score = 73.5 bits (154), Expect(3) = 2e-051
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +2 / +2
Query: 356 EKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
EK + NNPSL GFE+ID K LE CP VVSCADI+AFAARD++
Sbjct: 410 EKESPANNPSLHGFEIIDEAKSILEDKCPNVVSCADILAFAARDSA 547
Score = 53.8 bits (111), Expect(3) = 7e-024
Identities = 26/44 (59%), Positives = 29/44 (65%)
Frame = -3 / -1
Query: 486 SRAAKAMMSAQETTPGHAASRASLMASISSNPRRLGLLGAASFS 355
S AA A MSA ETT GH +S+ +SI SNP RLGLL SFS
Sbjct: 540 SLAANARMSAHETTFGHLSSKIDFASSIISNPWRLGLLAGDSFS 409
Score = 49.6 bits (102), Expect(3) = 7e-024
Identities = 28/66 (42%), Positives = 33/66 (50%)
Frame = -3 / -1
Query: 705 EEQWERPTVCAPERTTRSSSDMPLTAKLEARSLRLDVGGTRNLTDSEALEKVPSRRPDGM 526
EEQ E P CAPER T SS+D AK L+ G S+A E +PS RP G
Sbjct: 753 EEQ*ETPIECAPERVTMSSTDKNFAAKFCVSWFTLNCGAGMFPGMSDAREILPSLRPAGT 574
Query: 525 SKETLP 508
S+ P
Sbjct: 573 SQINPP 556
Score = 46.0 bits (94), Expect(3) = 7e-024
Identities = 27/55 (49%), Positives = 32/55 (58%)
Frame = -3 / -1
Query: 336 VGSRSTEASQPSTKQSWKSMRMTAAPLPGF*AMAFSMLALTIASAWGQV*R*YPS 172
V S S + SQP TKQS K + M A PGF A + A TIASA G + R* P+
Sbjct: 393 VESISIDPSQPLTKQS*KCILMRAGATPGFAVTALATAAPTIASASGHLSR**PT 229
>gb|DR117522.1|DR117522 RTMG1_7_B03.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_B03_A029 5', mRNA sequence
Length = 923
Score = 74.4 bits (156), Expect(4) = 3e-051
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +2 / +1
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A PN S+RGF++ID IK +EAAC GVVSCADI+A AARD+
Sbjct: 250 TGEKTAGPNANSVRGFDVIDTIKTQVEAACSGVVSCADILAIAARDS 390
Score = 69.8 bits (146), Expect(4) = 3e-051
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2 / +1
Query: 179 YYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD 331
+Y CP A +IVKA++ KA+ GA+++R+ FHDCFV GCD S+LLD
Sbjct: 82 FYSKVCPTALSIVKAAVTKAVNNEKRMGASLLRLHFHDCFVNGCDGSILLD 234
Score = 67.5 bits (141), Expect(4) = 3e-051
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +2 / +1
Query: 536 GRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSFGS 715
GR D T ++ S + + P SNLS L SSF G+S +DLV LSGAHT+G++ C++F +
Sbjct: 430 GRRDSTTASLSAANNNIPSPASNLSALISSFTAHGLSTKDLVALSGAHTIGQARCTTFRA 609
Query: 716 DRLDGPS 736
+ P+
Sbjct: 610 RVYNDPT 630
Score = 48.3 bits (99), Expect(4) = 3e-051
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +2 / +3
Query: 821 DVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSPETAKLVLDNAKIPGWWEDKFEKAMVKM 1000
D+ TP DN+YY ++ S L SD L + T V + + F AMVKM
Sbjct: 705 DLATPTTFDNKYYTDLRSQKGLLHSDQQLFSGGSTNSQVTTYSSNQNTFFTDFTAAMVKM 884
Query: 1001 ASLEVKTGHQGQV 1039
++ TG GQ+
Sbjct: 885 GNISPLTGTNGQI 923
>gb|CO369965.1|CO369965 RTK1_55_C11.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_55_C11_A029 5', mRNA sequence
Length = 687
Score = 107 bits (228), Expect(3) = 3e-051
Identities = 47/90 (52%), Positives = 57/90 (63%)
Frame = +2 / +1
Query: 236 AIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAI 415
A +P A +IR+ FHDCFV GCD SVL+D EK + NNPSL GF++ID
Sbjct: 1 AFHSSPEIAAKLIRLHFHDCFVRGCDGSVLIDSIAGQFVAEKDSPANNPSLGGFDVIDNA 180
Query: 416 KDALEAACPGVVSCADIIAFAARDASCFLS 505
K LE CP VSCADI+AFAARD++ S
Sbjct: 181 KSLLEKICPKKVSCADIVAFAARDSALLAS 270
Score = 81.3 bits (171), Expect(3) = 3e-051
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +2 / +1
Query: 521 FDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHC 700
+D+P+GR DG S AS L PPT N++ L FA KG+S +++V LSGAHT+G SHC
Sbjct: 292 WDVPAGRKDGNISLASNIPGNLPPPTFNVTQLTQIFATKGLSQDEMVTLSGAHTIGVSHC 471
Query: 701 SSFGS 715
+SF S
Sbjct: 472 TSFVS 486
Score = 79.4 bits (167), Expect(2) = 1e-022
Identities = 40/79 (50%), Positives = 46/79 (58%)
Frame = -3 / -2
Query: 486 SRAAKAMMSAQETTPGHAASRASLMASISSNPRRLGLLGAASFSGVGLNGVGSRSTEASQ 307
S AA A MSAQET G S + L SI+SNP RLGLL SFS + S TE S
Sbjct: 251 SLAANATMSAQETFFGQIFSNSDLALSITSNPPRLGLLAGESFSATN*PAMESMRTEPSH 72
Query: 306 PSTKQSWKSMRMTAAPLPG 250
P TKQSWK R++ A + G
Sbjct: 71 PLTKQSWKCKRISLAAISG 15
Score = 53.3 bits (110), Expect(3) = 3e-051
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2 / +1
Query: 740 INPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSD 898
++P A ++ RCP + ++ + TV+ D TP +DN YY +V+++ LFTSD
Sbjct: 529 LDPLYAQIMKQRCPQGSPSNANTTVVMDPQTPFILDNLYYNDVIANRGLFTSD 687
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -3 / -2
Query: 705 EEQWERPTVCAPERTTRSSSDMPLTAKLEARSLRLDVGGTRNLTDSEALEKVPSRRPDGM 526
E Q E P VCAP+ T SS D PL A + + L VGG R EA E PS P G
Sbjct: 476 EVQ*ETPIVCAPDNVTISSWDRPLVANI*VSWVTLKVGGGRFPGILEASEIFPSFLPAGT 297
Query: 525 SKE 517
S +
Sbjct: 296 SHQ 288
>gb|CO361618.1|CO361618 NDL2_6_A03.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_6_A03_A029 3', mRNA sequence
Length = 799
Score = 80.8 bits (170), Expect(4) = 4e-051
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +2 / -3
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A PNN SLRGF+++D IK LEAAC GVVSCADI+A AARD+
Sbjct: 512 TGEKTAKPNNNSLRGFDVVDTIKSQLEAACSGVVSCADIVAIAARDS 372
Score = 78.0 bits (164), Expect(4) = 4e-051
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +2 / -3
Query: 143 CQASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASV 322
C + Y L G+Y +CP +IV + +++AIAQ GA+++R+ FHDCFV GCD SV
Sbjct: 716 CSPAIYGQLSSGFYNQSCPNVLSIVNSVVQQAIAQEKRMGASLLRLHFHDCFVNGCDGSV 537
Query: 323 LLD 331
LLD
Sbjct: 536 LLD 528
Score = 70.7 bits (148), Expect(4) = 4e-051
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +2 / -3
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+ + GR D T ++ S + + PPTSNLS L SSF G+S +D+V L+G+HT+G
Sbjct: 359 GGPSWTVLLGRRDSTTASLSAANNLIPPPTSNLSALISSFGAVGLSPDDMVALAGSHTIG 180
Query: 689 RSHCSSF 709
++ C++F
Sbjct: 179 QARCTTF 159
Score = 29.9 bits (59), Expect(4) = 4e-051
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2 / -3
Query: 791 TTSDDPTVMQDVVTPNAMDNQYYKNVLS 874
T D+ D++TP DN YY N+ S
Sbjct: 86 TGGDNNLASLDLLTPTVFDNNYYNNLKS 3
>gb|DR079581.1|DR079581 RTFEPL1_12_E11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_12_E11_A029 3', mRNA sequence
Length = 866
Score = 84.0 bits (177), Expect(4) = 5e-051
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +2 / +1
Query: 515 VSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRS 694
+S+D+P+GR DG S AS+ + L PP N++ L F+ KG+S E++V+LSGAHT+G S
Sbjct: 391 LSWDVPAGRRDGRISRASDIAENLPPPFFNVTQLTQIFSAKGLSQEEMVILSGAHTIGVS 570
Query: 695 HCSS 706
HCSS
Sbjct: 571 HCSS 582
Score = 72.1 bits (151), Expect(4) = 5e-051
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +2 / +2
Query: 356 EKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFL 502
EK + NNPSL GF++IDA K LE CP VSCADI+AFAARD++ L
Sbjct: 122 EKDSPANNPSLHGFDVIDAAKSRLEKDCPNTVSCADILAFAARDSAKLL 268
Score = 58.3 bits (121), Expect(4) = 5e-051
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +2 / +2
Query: 740 INPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALL 910
++P A L+ RCP + ++ TV +++TPN +DN YY + LFTSDAALL
Sbjct: 695 LDPNYANILKARCPQGSPSNVKTTVPMEIMTPNTLDNVYYDELKRKHGLFTSDAALL 865
Score = 57.4 bits (119), Expect(4) = 2e-023
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = -3 / -1
Query: 705 EEQWERPTVCAPERTTRSSSDMPLTAKLEARSLRLDVGGTRNLTDSEALEKVPSRRPDGM 526
EEQ + P VCAPE T SS D PL K+ + L GG + SEA E +PS RP G
Sbjct: 581 EEQ*DTPIVCAPESMTISSCDRPLAEKIWVSCVTLKKGGGKFSAISEAREILPSLRPAGT 402
Query: 525 SK 520
S+
Sbjct: 401 SQ 396
Score = 51.9 bits (107), Expect(4) = 5e-051
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 236 AIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
A +N G +IRM FHDCFV GCD SVL+D T
Sbjct: 5 AFMKNSGVAPGLIRMHFHDCFVRGCDGSVLIDST 106
Score = 51.5 bits (106), Expect(4) = 2e-023
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = -3 / -3
Query: 486 SRAAKAMMSAQETTPGHAASRASLMASISSNPRRLGLLGAASFSGV 349
S AA A MSAQET G + S AS++SNP RLGLL SFS +
Sbjct: 252 SLAANARMSAQETVFGQSFSNLDFAASMTSNP*RLGLLAGLSFSAI 115
Score = 36.3 bits (73), Expect(4) = 2e-023
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = -3 / -3
Query: 345 LNGVGSRSTEASQPSTKQSWKSMRMTAAPLPGF*AMAF 232
L V S T+ S P TKQSWK +RM+ P F AF
Sbjct: 114 LLAVESIRTDPSHPLTKQSWKCIRMSPGATPLFFMNAF 1
Score = 27.2 bits (53), Expect(4) = 2e-023
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = -3 / -3
Query: 903 AASEVKSTVCESTFL*YWLSMALGVTTSCITVGSSLVVVLAGQRVLRKAASAG 745
AASEV + + *Y LS LGV S TV +L+ + G R L A G
Sbjct: 858 AASEVNNPCFLLSSS*YTLSRVLGVIISMGTVVFTLLGLPWGHRALSMLA*LG 700
>dbj|BD224554.1| Materials and methods for the modification of plant lignin content
Length = 916
Score = 76.2 bits (160), Expect(4) = 7e-051
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +2 / +1
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A PNN S RGFE+ID+IK LE AC GVVSCADI+ AARD+
Sbjct: 307 TSEKYALPNNNSARGFEVIDSIKSQLENACTGVVSCADILTIAARDS 447
Score = 71.2 bits (149), Expect(4) = 7e-051
Identities = 26/51 (50%), Positives = 40/51 (78%)
Frame = +2 / +1
Query: 179 YYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD 331
+Y +CP+A +IV+A +++A+A+ GA+++R+ FHDCFV GCD SVLLD
Sbjct: 139 FYDKSCPKALSIVQAGVKQAVAKEKRMGASLLRLHFHDCFVNGCDGSVLLD 291
Score = 65.7 bits (137), Expect(4) = 7e-051
Identities = 27/67 (40%), Positives = 43/67 (64%)
Frame = +2 / +1
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+ + GR D T ++ S + + PPTSNL+ L S F +G+S +++V LSG HT+G
Sbjct: 460 GGPSWKVMLGRRDSTTASISGANNNIPPPTSNLTKLISLFQAQGLSTKEMVALSGGHTIG 639
Query: 689 RSHCSSF 709
++ C +F
Sbjct: 640 QAQCKNF 660
Score = 45.5 bits (93), Expect(4) = 7e-051
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +2 / +1
Query: 734 SDINPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLT 913
++I+ A LR++CP+ T + D D TP D YY N+ S L SD L
Sbjct: 682 TNIDTTYATSLRSKCPSTTGSGDSNLSPLDYTTPTVFDKNYYYNLKSKRGLLHSDQELFN 861
Query: 914 SPET 925
T
Sbjct: 862 GGST 873
>dbj|BD224556.1| Materials and methods for the modification of plant lignin content
Length = 1224
Score = 73.5 bits (154), Expect(5) = 8e-051
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +2 / +2
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A PN S RGFE+ID+IK +EAAC GVVSCADI+ AARD+
Sbjct: 314 TGEKTAGPNANSARGFEVIDSIKTQVEAACSGVVSCADILTIAARDS 454
Score = 69.8 bits (146), Expect(5) = 8e-051
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = +2 / +2
Query: 179 YYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD 331
+Y +CP+ +IVK+ +++A+A+ GA+++R+ FHDCFV GCD S+LLD
Sbjct: 146 FYAKSCPRLPSIVKSVVKQAVAKEKRMGASLVRLHFHDCFVNGCDGSILLD 298
Score = 64.8 bits (135), Expect(5) = 8e-051
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = +2 / +2
Query: 536 GRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSF 709
GR D T ++ S + + P S+LS L SSF G+S +DLV LSGAHT+G+S C+ F
Sbjct: 494 GRRDSTTASLSAANNNIPSPASSLSTLISSFQAHGLSTKDLVALSGAHTIGQSRCAFF 667
Score = 40.5 bits (82), Expect(5) = 8e-051
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / +2
Query: 977 FEKAMVKMASLEVKTGHQGQVRKNCRAIN 1063
F AMVKM ++ TG GQ+RKNCR N
Sbjct: 926 FTAAMVKMGNISPLTGTNGQIRKNCRKSN 1012
Score = 27.6 bits (54), Expect(5) = 8e-051
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2 / +2
Query: 821 DVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSPET 925
D VT DN+YY N+ L SD L T
Sbjct: 770 DAVTSITFDNKYYSNLKIQKGLLHSDQQLFNGGST 874
>gb|CF400609.1|CF400609 RTWW1_6_D05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_6_D05_A015 5', mRNA sequence
Length = 752
Score = 84.0 bits (177), Expect(3) = 2e-050
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +2 / +1
Query: 515 VSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRS 694
+S+D+P+GR DG S AS+ L PP N++ L FA KG+S E++V+LSGAHT+G S
Sbjct: 559 LSWDVPAGRRDGRISRASDIAGNLPPPFLNVTQLTQFFAAKGLSQEEMVILSGAHTIGVS 738
Query: 695 HCSS 706
HCSS
Sbjct: 739 HCSS 750
Score = 78.0 bits (164), Expect(3) = 2e-050
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = +2 / +1
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
L +G+YR++CP AE+IV ++ A +N G +IRM FHDCFV GCD SVL+D T
Sbjct: 208 LTVGFYRWSCPAAESIVFEAVRTAYMKNSGVAPGLIRMHFHDCFVRGCDGSVLIDST 378
Score = 77.1 bits (162), Expect(3) = 2e-050
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = +2 / +1
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLS 505
T EK + NNPSL GFE+IDA K LE CP VSCADI+AFAARD++ S
Sbjct: 388 TAEKDSPANNPSLHGFEVIDAAKSRLEVVCPNTVSCADILAFAARDSATLAS 543
Score = 55.1 bits (114), Expect(3) = 2e-025
Identities = 29/62 (46%), Positives = 34/62 (54%)
Frame = -3 / -1
Query: 705 EEQWERPTVCAPERTTRSSSDMPLTAKLEARSLRLDVGGTRNLTDSEALEKVPSRRPDGM 526
EEQ + P VCAPE T SS D PL AK + GG + SEA E +PS RP G
Sbjct: 749 EEQ*DTPIVCAPESMTISSCDRPLAAKNWVNCVTFKNGGGKFPAISEAREILPSLRPAGT 570
Query: 525 SK 520
S+
Sbjct: 569 SQ 564
Score = 53.8 bits (111), Expect(3) = 2e-025
Identities = 27/46 (58%), Positives = 28/46 (60%)
Frame = -3 / -1
Query: 486 SRAAKAMMSAQETTPGHAASRASLMASISSNPRRLGLLGAASFSGV 349
S AA A MSAQET G S ASI+SNP RLGLL SFS V
Sbjct: 524 SLAANARMSAQETVFGQTTSNLDFAASITSNP*RLGLLAGLSFSAV 387
Score = 45.5 bits (93), Expect(3) = 2e-025
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = -3 / -1
Query: 345 LNGVGSRSTEASQPSTKQSWKSMRMTAAPLPGF*AMAFSMLALTIASAWGQV*R*YPS 172
L V S T+ S P TKQSWK +RM+ P F A + T+ SA GQ+ R* P+
Sbjct: 386 LLAVESMRTDPSHPLTKQSWKCIRMSPGATPLFFMYAVRTASNTMDSAAGQLQR*KPT 213
>gb|CO165064.1|CO165064 FLD1_52_D01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_52_D01_A029 3', mRNA sequence
Length = 912
Score = 71.6 bits (150), Expect(4) = 4e-050
Identities = 28/85 (32%), Positives = 49/85 (57%)
Frame = +2 / -1
Query: 809 TVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSPETAKLVLDNAKIPGWWEDKFEKA 988
T+ D TPN D Y++++L + +F SD+AL+ T V + A + D+F A
Sbjct: 321 TIPLDPSTPNIFDKNYFQDLLQNEGIFASDSALVIDSRTKVFVTEYANDEDSFRDQFGYA 142
Query: 989 MVKMASLEVKTGHQGQVRKNCRAIN 1063
M+++ +++ TG QG++RK C +N
Sbjct: 141 MIRLGRVQILTGQQGEIRKRCGFVN 67
Score = 70.3 bits (147), Expect(4) = 4e-050
Identities = 30/69 (43%), Positives = 42/69 (60%)
Frame = +2 / -1
Query: 500 LSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAH 679
L G ++ + GR DG S +S+++ L SN L SF+ G+S+ DLV LSGAH
Sbjct: 639 LQSGGPTWAVEMGRRDGLTSRSSDAISHLPSSRSNAQALIDSFSSNGLSIRDLVTLSGAH 460
Query: 680 TVGRSHCSS 706
T G+SHCS+
Sbjct: 459 TFGKSHCST 433
Score = 61.6 bits (128), Expect(4) = 4e-050
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +2 / -1
Query: 377 NPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
N +L F++ID IK LE ACPGVVSCADI+A AARDA
Sbjct: 756 NLTLSQFDVIDEIKSNLEKACPGVVSCADILALAARDA 643
Score = 52.8 bits (109), Expect(4) = 4e-050
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2 / -1
Query: 227 MEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLL 328
+ K + Q+ GA ++RM FHDCFV GCDASVLL
Sbjct: 897 VNKHLKQDNTIGAPIVRMFFHDCFVRGCDASVLL 796
Score = 47.8 bits (98), Expect(4) = 3e-021
Identities = 26/56 (46%), Positives = 29/56 (51%)
Frame = -3 / +2
Query: 702 EQWERPTVCAPERTTRSSSDMPLTAKLEARSLRLDVGGTRNLTDSEALEKVPSRRP 535
EQW+ P V APER TRS PL KL R+ LD R SE + PS RP
Sbjct: 437 EQWDLPNVWAPERVTRSLMLKPLELKLSMRAWALDRDEGR*DIASELRDVSPSLRP 604
Score = 47.3 bits (97), Expect(4) = 3e-021
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = -3 / +2
Query: 489 ASRAAKAMMSAQETTPGHAASRASLMASISSNPRRLGL 376
AS AA+A +SAQETTPGHA S+ ++SI+SN R+ L
Sbjct: 644 ASLAARAKISAQETTPGHAFSKLLFISSITSNWLRVRL 757
Score = 40.5 bits (82), Expect(4) = 3e-021
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -3 / +2
Query: 321 TEASQPSTKQSWKSMRMTAAPL 256
T+ASQP TKQSWK+MR AP+
Sbjct: 803 TDASQPLTKQSWKNMRTIGAPI 868
Score = 29.0 bits (57), Expect(4) = 3e-021
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2 / +1
Query: 1063 IDRPAVLPDLSLVPSLDFEAGHLDHGLLELV 971
ID+ L +L+L+ S D +HG+ ELV
Sbjct: 67 IDKTTSLTNLTLLASQDLNPAQANHGITELV 159
>gb|CO366567.1|CO366567 RTK1_28_D08.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_28_D08_A029 5', mRNA sequence
Length = 817
Score = 80.8 bits (170), Expect(4) = 7e-050
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +2 / +2
Query: 356 EKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
EK AAPNN S+RGFE+IDAIK LE+ACPG VSCADI+A ARD+
Sbjct: 182 EKTAAPNNNSIRGFEVIDAIKKELESACPGKVSCADILAVVARDS 316
Score = 78.0 bits (164), Expect(4) = 7e-050
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +2 / +2
Query: 182 YRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEK 361
+++TCPQA I+ A +++A AQ A+++R+ FHDCFV GCD SVLLD TP +
Sbjct: 11 HQWTCPQAAFIISAGVQRAAAQEARMAASLLRLHFHDCFVNGCDGSVLLDDTPTFEGEKT 190
Query: 362 LAAPNN 379
A NN
Sbjct: 191 AAPNNN 208
Score = 62.9 bits (131), Expect(4) = 7e-050
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +2 / +2
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+++ GR D ++ + + + PPTS++S L ++F G++ DLV LSGAHT+G
Sbjct: 329 GGPSWEVLLGRRDSLTASKAAANNGIAPPTSDISALVANFKGVGLTQNDLVALSGAHTIG 508
Query: 689 RSHCSSFGS 715
+ C +F S
Sbjct: 509 NARCQTFSS 535
Score = 33.6 bits (67), Expect(4) = 7e-050
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2 / +2
Query: 764 LRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTS 916
L+ C +++ D+ TP DNQYY+N+ S L +D L ++
Sbjct: 590 LQQLCTQGFVINNNTLASLDLETPVTFDNQYYENLRSGEGLLKTDQLLFSN 742
>gb|DR079660.1|DR079660 RTFEPL1_12_E11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_12_E11_A029 5', mRNA sequence
Length = 831
Score = 84.0 bits (177), Expect(3) = 2e-049
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +2 / +3
Query: 515 VSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRS 694
+S+D+P+GR DG S AS+ + L PP N++ L F+ KG+S E++V+LSGAHT+G S
Sbjct: 558 LSWDVPAGRRDGRISRASDIAENLPPPFFNVTQLTQIFSAKGLSQEEMVILSGAHTIGVS 737
Query: 695 HCSS 706
HCSS
Sbjct: 738 HCSS 749
Score = 79.9 bits (168), Expect(3) = 2e-049
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +2 / +1
Query: 161 YPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
+ L +G+YR++CP AE+IV ++ A +N G +IRM FHDCFV GCD SVL+D T
Sbjct: 97 HQLTVGFYRWSCPAAESIVFEALRNAFMKNSGVAPGLIRMHFHDCFVRGCDGSVLIDST 273
Score = 72.1 bits (151), Expect(3) = 2e-049
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +2 / +1
Query: 356 EKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFL 502
EK + NNPSL GF++IDA K LE CP VSCADI+AFAARD++ L
Sbjct: 289 EKDSPANNPSLHGFDVIDAAKSRLEKDCPNTVSCADILAFAARDSAKLL 435
Score = 57.4 bits (119), Expect(3) = 3e-024
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = -3 / -3
Query: 705 EEQWERPTVCAPERTTRSSSDMPLTAKLEARSLRLDVGGTRNLTDSEALEKVPSRRPDGM 526
EEQ + P VCAPE T SS D PL K+ + L GG + SEA E +PS RP G
Sbjct: 748 EEQ*DTPIVCAPESMTISSCDRPLAEKIWVSCVTLKKGGGKFSAISEAREILPSLRPAGT 569
Query: 525 SK 520
S+
Sbjct: 568 SQ 563
Score = 51.5 bits (106), Expect(3) = 3e-024
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = -3 / -2
Query: 486 SRAAKAMMSAQETTPGHAASRASLMASISSNPRRLGLLGAASFSGV 349
S AA A MSAQET G + S AS++SNP RLGLL SFS +
Sbjct: 419 SLAANARMSAQETVFGQSFSNLDFAASMTSNP*RLGLLAGLSFSAI 282
Score = 47.3 bits (97), Expect(3) = 3e-024
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -3 / -2
Query: 345 LNGVGSRSTEASQPSTKQSWKSMRMTAAPLPGF*AMAFSMLALTIASAWGQV*R*YPS 172
L V S T+ S P TKQSWK +RM+ P F AF + T+ SA GQ+ R* P+
Sbjct: 281 LLAVESIRTDPSHPLTKQSWKCIRMSPGATPLFFMNAFRRASNTMDSAAGQLQR*KPT 108
>gb|DR053478.1|DR053478 RTCA1_11_A02.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_11_A02_A029 5', mRNA sequence
Length = 650
Score = 91.8 bits (194), Expect(3) = 3e-049
Identities = 37/77 (48%), Positives = 51/77 (66%)
Frame = +2 / +3
Query: 149 ASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLL 328
A+P+ L+ YY++TCPQA AI+ A +++A AQ A+++R+ FHDCFV GCD SVLL
Sbjct: 63 ANPHGALQPDYYQWTCPQAAAIISAGVQRAAAQEARMAASLLRLHFHDCFVNGCDGSVLL 242
Query: 329 DPTPFSPTPEKLAAPNN 379
D TP + A NN
Sbjct: 243 DDTPTFEGEKTAAPNNN 293
Score = 80.8 bits (170), Expect(3) = 3e-049
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +2 / +3
Query: 356 EKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
EK AAPNN S+RGFE+IDAIK LE+ACPG VSCADI+A ARD+
Sbjct: 267 EKTAAPNNNSIRGFEVIDAIKKELESACPGKVSCADILAVVARDS 401
Score = 62.9 bits (131), Expect(3) = 3e-049
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +2 / +3
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+++ GR D ++ + + + PPTS++S L ++F G++ DLV LSGAHT+G
Sbjct: 414 GGPSWEVLLGRRDSLTASKAAANNGIAPPTSDISALVANFKGVGLTQNDLVALSGAHTIG 593
Query: 689 RSHCSSFGS 715
+ C +F S
Sbjct: 594 NARCQTFSS 620
>gb|DR098772.1|DR098772 STRR1_47_F07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_47_F07_A033 5', mRNA sequence
Length = 815
Score = 75.8 bits (159), Expect(4) = 4e-049
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +2 / +3
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A PNN S RGF++ID IK +EA C GVVSCADI+A AARD+
Sbjct: 210 TGEKTAVPNNNSARGFDVIDTIKSQVEAVCSGVVSCADILAIAARDS 350
Score = 72.5 bits (152), Expect(4) = 4e-049
Identities = 27/63 (42%), Positives = 41/63 (65%)
Frame = +2 / +3
Query: 143 CQASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASV 322
C Y L +Y +CP+ + V+A++++A+A GA+++R+ FHDCFV GCD SV
Sbjct: 6 CSTVAYAQLSATFYNTSCPKLLSTVQAAVKQAVANEKRMGASLLRLHFHDCFVNGCDGSV 185
Query: 323 LLD 331
LLD
Sbjct: 186 LLD 194
Score = 68.9 bits (144), Expect(4) = 4e-049
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +2 / +3
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G ++ + GR D ++ S + + PPTSNLS L S F +G+S +D+VVL+GAHT+G
Sbjct: 363 GGPTWTVQLGRRDSRSASLSGANNNIPPPTSNLSALISLFQAQGLSTKDMVVLAGAHTIG 542
Query: 689 RSHCSSF 709
++ C+SF
Sbjct: 543 QARCTSF 563
Score = 35.4 bits (71), Expect(4) = 4e-049
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2 / +3
Query: 788 TTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSPETAKLV 937
+T SD+ D+VTP D YY N+ S L SD L T +V
Sbjct: 633 STGSDNNLSPLDLVTPTTFDINYYSNLRSQKGLLHSDQQLYNGGSTDSMV 782
>gb|CF663696.1|CF663696 RTCNT1_4_C09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_4_C09_A029 5', mRNA sequence
Length = 771
Score = 91.8 bits (194), Expect(3) = 6e-049
Identities = 37/77 (48%), Positives = 51/77 (66%)
Frame = +2 / +1
Query: 149 ASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLL 328
A+P+ L+ YY++TCPQA AI+ A +++A AQ A+++R+ FHDCFV GCD SVLL
Sbjct: 4 ANPHGALQPDYYQWTCPQAAAIISAGVQRAAAQEARMAASLLRLHFHDCFVNGCDGSVLL 183
Query: 329 DPTPFSPTPEKLAAPNN 379
D TP + A NN
Sbjct: 184 DDTPTFEGEKTAAPNNN 234
Score = 82.2 bits (173), Expect(3) = 6e-049
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +2 / +1
Query: 356 EKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
EK AAPNN S+RGFE+IDAIK+ LE+ACPG VSCADI+A ARD+
Sbjct: 208 EKTAAPNNNSIRGFEVIDAIKEELESACPGKVSCADILAVVARDS 342
Score = 60.2 bits (125), Expect(3) = 6e-049
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +2 / +1
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+++ GR D ++ + + + PTS++S L SF G++ +DLV LSGAHT+G
Sbjct: 355 GGPSWEVLLGRRDSLTASKAAANNSIPSPTSDISALVESFKGVGLTQKDLVALSGAHTIG 534
Query: 689 RSHCSSFGS 715
+ C +F S
Sbjct: 535 NARCQTFSS 561
>gb|DR180626.1|DR180626 RTMNUT1_33_G02.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_33_G02_A029 5', mRNA sequence
Length = 675
Score = 90.4 bits (191), Expect(3) = 6e-049
Identities = 37/77 (48%), Positives = 50/77 (64%)
Frame = +2 / +1
Query: 149 ASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLL 328
A+P L+ YY++TCPQA AI+ A +++A AQ A+++R+ FHDCFV GCD SVLL
Sbjct: 100 ANPQGALQPDYYQWTCPQAAAIISAGVQRAAAQEARMAASLLRLHFHDCFVNGCDGSVLL 279
Query: 329 DPTPFSPTPEKLAAPNN 379
D TP + A NN
Sbjct: 280 DDTPTFEGEKTAAPNNN 330
Score = 80.8 bits (170), Expect(3) = 6e-049
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +2 / +1
Query: 356 EKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
EK AAPNN S+RGFE+IDAIK LE+ACPG VSCADI+A ARD+
Sbjct: 304 EKTAAPNNNSIRGFEVIDAIKKELESACPGKVSCADILAVVARDS 438
Score = 62.9 bits (131), Expect(3) = 6e-049
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +2 / +1
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+++ GR D ++ + + + PPTS++S L ++F G++ DLV LSGAHT+G
Sbjct: 451 GGPSWEVLLGRRDSLTASKAAANNGIAPPTSDISALVANFKGVGLTQNDLVALSGAHTIG 630
Query: 689 RSHCSSFGS 715
+ C +F S
Sbjct: 631 NARCQTFSS 657
>gb|DR096218.1|DR096218 STRR1_26_C02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_C02_A033 5', mRNA sequence
Length = 771
Score = 98.2 bits (208), Expect(3) = 1e-048
Identities = 41/84 (48%), Positives = 52/84 (61%)
Frame = +2 / -3
Query: 812 VMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSPETAKLVLDNAKIPGWWEDKFEKAM 991
V D +TP +DN YYK V ++ LFTSD ALLT P TA +V N+ W +F AM
Sbjct: 349 VPMDSITPTILDNDYYKEVKANRGLFTSDQALLTDPATANMVTQNSVDALLWSSRFAAAM 170
Query: 992 VKMASLEVKTGHQGQVRKNCRAIN 1063
VKM + V TG QG++R NC A+N
Sbjct: 169 VKMGEIGVLTGSQGEIRLNCHAVN 98
Score = 84.0 bits (177), Expect(3) = 1e-048
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +2 / -3
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G +++++ +GR DG S A++ LVPPT NLS + FAVKG++ E++V LSGAHTVG
Sbjct: 667 GGITWEVRAGRRDGKVSKAADVSTNLVPPTFNLSQVTQRFAVKGLTQEEMVTLSGAHTVG 488
Query: 689 RSHCSSF 709
SHC +F
Sbjct: 487 SSHCFAF 467
Score = 51.0 bits (105), Expect(3) = 1e-048
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +2 / -3
Query: 401 LIDAIKDALEAACPGVVSCADIIAFAARDAS 493
+ID K +EA C GVVSCADIIAFAARD++
Sbjct: 769 VIDDAKKNIEAVCKGVVSCADIIAFAARDSA 677
>gb|CF474383.1|CF474383 RTWW2_20_F10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_20_F10_A021 5', mRNA sequence
Length = 718
Score = 133 bits (285), Expect(2) = 1e-048
Identities = 58/113 (51%), Positives = 71/113 (62%)
Frame = +2 / +3
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFS 346
L + YY+Y CP AE IV A + A +P A +IR+ FHDCFV GCD SVL+D
Sbjct: 18 LAVSYYKYICPPAEPIVFAVVSSAFHSSPEIAAKLIRLHFHDCFVRGCDGSVLIDSIAGQ 197
Query: 347 PTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLS 505
EK + NNPSL GF++ID K LE CP VSCADI+AFAARD++ S
Sbjct: 198 FVAEKDSPANNPSLGGFDVIDNAKSLLEKICPKKVSCADIVAFAARDSALLAS 356
Score = 85.8 bits (181), Expect(2) = 1e-024
Identities = 47/99 (47%), Positives = 55/99 (55%)
Frame = -3 / -1
Query: 486 SRAAKAMMSAQETTPGHAASRASLMASISSNPRRLGLLGAASFSGVGLNGVGSRSTEASQ 307
S AA A MSAQET G S + L SI+SNP RLGLL SFS + S TE S
Sbjct: 337 SLAANATMSAQETFFGQIFSSSDLALSITSNPPRLGLLAGESFSATN*PAMESMRTEPSH 158
Query: 306 PSTKQSWKSMRMTAAPLPGF*AMAFSMLALTIASAWGQV 190
P TKQSWK R++ A + G A A T+ SA GQ+
Sbjct: 157 PLTKQSWKCKRISLAAISGELWNALLTTANTMGSAGGQI 41
Score = 81.3 bits (171), Expect(2) = 1e-048
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +2 / +3
Query: 521 FDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHC 700
+D+P+GR DG S AS L PPT N++ L FA KG+S +++V LSGAHT+G SHC
Sbjct: 378 WDVPAGRKDGNISLASNIPGNLPPPTFNVTQLTQIFATKGLSQDEMVTLSGAHTIGVSHC 557
Query: 701 SSFGS 715
+SF S
Sbjct: 558 TSFVS 572
Score = 48.3 bits (99), Expect(2) = 1e-024
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -3 / -1
Query: 705 EEQWERPTVCAPERTTRSSSDMPLTAKLEARSLRLDVGGTRNLTDSEALEKVPSRRPDGM 526
E Q E P VCAP+ T SS D PL A + + L VGG R EA E PS P G
Sbjct: 562 EVQ*ETPIVCAPDNVTISSWDRPLVANI*VSWVTLKVGGGRFPGILEASEIFPSFLPAGT 383
Query: 525 SKE 517
S +
Sbjct: 382 SHQ 374
>gb|DR164099.1|DR164099 RTFE1_46_G03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_46_G03_A029 5', mRNA sequence
Length = 860
Score = 133 bits (284), Expect(3) = 2e-048
Identities = 60/117 (51%), Positives = 76/117 (64%)
Frame = +2 / +1
Query: 365 AAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRL 544
AA N SLRGF++IDA K LE CPGVVSCADI++ ARDA + VS+ + +GR
Sbjct: 256 AAIPNLSLRGFDVIDAAKSELEEICPGVVSCADIVSLVARDAVVAANNAGVSWPVKTGRR 435
Query: 545 DGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSFGS 715
DG SN SE + + P N S L + FA KG+S+EDLVVLSG HT+G C+ F +
Sbjct: 436 DGRVSNVSEVLSNIPSPFFNFSQLNAFFAAKGLSIEDLVVLSGGHTIGVGLCNFFSN 606
Score = 69.3 bits (145), Expect(3) = 2e-048
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +2 / +1
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
L L +Y+ TCP AE+ +K K I ++ A ++RM FHDCFV GCD SVLL+ T
Sbjct: 64 LTLDFYKTTCPSAESTIKRVATKYIKKDKTLAAPLLRMHFHDCFVRGCDGSVLLNST 234
Score = 30.4 bits (60), Expect(3) = 2e-048
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2 / +1
Query: 809 TVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLT 913
TV D + D YY+ + S+ LF SDA LLT
Sbjct: 712 TVPMDPRSSLNFDRHYYRTLESNRGLFLSDAGLLT 816
>gb|CF477732.1|CF477732 RTWW3_9_H04.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_9_H04_A022 5', mRNA sequence
Length = 704
Score = 87.2 bits (184), Expect(4) = 2e-048
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = +2 / +1
Query: 506 QGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTV 685
Q +++D+P+GR DG S AS+ L PPT N++ L FA KG+S +++V+LSGAHT+
Sbjct: 337 QYPLTWDVPAGRRDGNISLASDIPANLPPPTFNVTQLTQRFAAKGLSQDEMVILSGAHTI 516
Query: 686 GRSHCSSFGS 715
G SHCSSF S
Sbjct: 517 GVSHCSSFVS 546
Score = 70.3 bits (147), Expect(4) = 2e-048
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = +2 / +1
Query: 356 EKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
EK + NNPSL GF++ID K LEA CP VSCADI+AFAARD++
Sbjct: 181 EKDSPANNPSLHGFDVIDMAKAKLEAMCPQTVSCADILAFAARDSA 318
Score = 67.5 bits (141), Expect(4) = 2e-048
Identities = 26/52 (50%), Positives = 32/52 (61%)
Frame = +2 / +1
Query: 176 GYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD 331
G+Y +CP AE V ++ A NP +IRM FHDCFV GCD SVL+D
Sbjct: 4 GFYSLSCPDAEFAVFEVVKNAFINNPAVAPGLIRMHFHDCFVRGCDGSVLID 159
Score = 55.6 bits (115), Expect(3) = 6e-023
Identities = 32/61 (52%), Positives = 33/61 (54%)
Frame = -3 / -1
Query: 705 EEQWERPTVCAPERTTRSSSDMPLTAKLEARSLRLDVGGTRNLTDSEALEKVPSRRPDGM 526
EEQ E P V APE T SS D PL A L + L VGG R SEA E PS RP G
Sbjct: 536 EEQCETPIVWAPESITISSWDSPLAANL*VN*VTLKVGGGRFAGISEASEIFPSLRPAGT 357
Query: 525 S 523
S
Sbjct: 356 S 354
Score = 50.6 bits (104), Expect(3) = 6e-023
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = -3 / -1
Query: 486 SRAAKAMMSAQETTPGHAASRASLMASISSNPRRLGLLGAASFS 355
S AA A +SA ET GH AS + SI+SNP RLGLL SFS
Sbjct: 311 SLAANARISAHETVWGHIASSLAFAMSITSNP*RLGLLAGESFS 180
Score = 40.0 bits (81), Expect(3) = 6e-023
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = -3 / -1
Query: 330 SRSTEASQPSTKQSWKSMRMTAAPLPGF*AMAFSMLALTIASAWGQV 190
S T+ S P TKQSWK +RM+ G AF + T SA GQ+
Sbjct: 158 SMRTDPSHPLTKQSWKCIRMSPGATAGLFMNAFFTTSNTANSASGQL 18
Score = 25.4 bits (49), Expect(4) = 2e-048
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2 / +1
Query: 785 NTTTSDDPTVMQDVVTPNAMDNQY 856
N ++ TV +V TPN +DN Y
Sbjct: 631 NGNPNNKTTVPMEVNTPNILDNLY 702
>gb|DR056162.1|DR056162 RTCA1_28_A10.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_28_A10_A029 5', mRNA sequence
Length = 698
Score = 136 bits (291), Expect(2) = 3e-048
Identities = 59/113 (52%), Positives = 72/113 (63%)
Frame = +2 / +3
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFS 346
L +GYY+Y CP AE IV A + A +P A +IR+ FHDCFV GCD SVL+D
Sbjct: 117 LAVGYYKYICPAAEPIVFAVVSSAFHSSPEIAAKLIRLHFHDCFVRGCDGSVLIDSIAGQ 296
Query: 347 PTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLS 505
EK + NNPSL GF++ID K LE CP VSCADI+AFAARD++ S
Sbjct: 297 FVAEKDSPANNPSLGGFDVIDNAKSLLEKICPKKVSCADIVAFAARDSALLAS 455
Score = 89.0 bits (188), Expect(2) = 5e-025
Identities = 50/107 (46%), Positives = 60/107 (56%)
Frame = -3 / -2
Query: 486 SRAAKAMMSAQETTPGHAASRASLMASISSNPRRLGLLGAASFSGVGLNGVGSRSTEASQ 307
S AA A MSAQET G S + L SI+SNP RLGLL SFS + S TE S
Sbjct: 436 SLAANATMSAQETFFGQIFSNSDLALSITSNPPRLGLLAGESFSATNWPAMESMRTEPSH 257
Query: 306 PSTKQSWKSMRMTAAPLPGF*AMAFSMLALTIASAWGQV*R*YPSSR 166
P TKQSWK R++ A + G A A T+ SA GQ+ * P++R
Sbjct: 256 PLTKQSWKCKRISLAAISGELWNALLTTANTMGSAAGQIYL**PTAR 116
Score = 77.1 bits (162), Expect(2) = 3e-048
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +2 / +3
Query: 521 FDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHC 700
+D+P+GR DG S AS L PPT N + L FA KG+S +++V LSGAHT+G SHC
Sbjct: 477 WDVPAGRKDGNISLASNIRGNLPPPTFNETQLTQLFASKGLSQDEMVTLSGAHTIGVSHC 656
Query: 701 SSFGS 715
SF S
Sbjct: 657 PSFVS 671
Score = 46.4 bits (95), Expect(2) = 5e-025
Identities = 28/63 (44%), Positives = 31/63 (49%)
Frame = -3 / -2
Query: 705 EEQWERPTVCAPERTTRSSSDMPLTAKLEARSLRLDVGGTRNLTDSEALEKVPSRRPDGM 526
E Q E P VCAP+ T SS D PL A + L VGG R EA E PS P G
Sbjct: 661 EGQ*ETPIVCAPDNVTISSWDRPLDANS*VSWVSLKVGGGRFPRILEASEIFPSFLPAGT 482
Query: 525 SKE 517
S +
Sbjct: 481 SHQ 473
>gb|CO366046.1|CO366046 RTK1_20_G03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_20_G03_A029 5', mRNA sequence
Length = 796
Score = 75.8 bits (159), Expect(4) = 4e-048
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +2 / +1
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A PNN S RGF++ID IK +EA C GVVSCADI+A AARD+
Sbjct: 217 TGEKTAVPNNNSARGFDVIDTIKSQVEAVCSGVVSCADILAIAARDS 357
Score = 72.5 bits (152), Expect(4) = 4e-048
Identities = 27/63 (42%), Positives = 41/63 (65%)
Frame = +2 / +1
Query: 143 CQASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASV 322
C Y L +Y +CP+ + V+A++++A+A GA+++R+ FHDCFV GCD SV
Sbjct: 13 CSTVAYAQLSATFYNTSCPKLLSTVQAAVKQAVANEKRMGASLLRLHFHDCFVNGCDGSV 192
Query: 323 LLD 331
LLD
Sbjct: 193 LLD 201
Score = 66.6 bits (139), Expect(4) = 4e-048
Identities = 29/67 (43%), Positives = 44/67 (65%)
Frame = +2 / +1
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G ++ + GR D ++ S + + PTSNLS L S F +G+S +D+VVLSGAHT+G
Sbjct: 370 GGPTWTVQLGRRDSRTASLSGANSNIPAPTSNLSALISLFQAQGLSTKDMVVLSGAHTIG 549
Query: 689 RSHCSSF 709
++ C+SF
Sbjct: 550 QARCTSF 570
Score = 34.5 bits (69), Expect(4) = 4e-048
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2 / +1
Query: 788 TTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSPETAKLV 937
+T SD+ D VTP D YY N+ S L SD L T +V
Sbjct: 640 STGSDNNLSPLDRVTPTTFDINYYSNLRSQKGLLHSDQQLYNGGSTVSMV 789
>gb|DR088958.1|DR088958 RTAL1_5_E09.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_5_E09_A029 5', mRNA sequence
Length = 860
Score = 71.6 bits (150), Expect(4) = 5e-048
Identities = 25/51 (49%), Positives = 39/51 (76%)
Frame = +2 / +1
Query: 179 YYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD 331
+Y+ +CP A +IV A+++ A+A GA+++R+ FHDCFV+GCD S+LLD
Sbjct: 79 FYKTSCPTALSIVNAAVKNAVASEKRMGASLLRLHFHDCFVQGCDGSILLD 231
Score = 71.2 bits (149), Expect(4) = 5e-048
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +2 / +1
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A N S+RGF+++D IK LEAAC GVVSCADI+A AARD+
Sbjct: 247 TGEKTAGANANSVRGFDVVDTIKTNLEAACSGVVSCADILAIAARDS 387
Score = 65.7 bits (137), Expect(4) = 5e-048
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = +2 / +1
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+ + GR D T ++ S + L P S+LS L ++F +G+S +DLV LSGAHT+G
Sbjct: 400 GGRSYTVQLGRRDSTTASLSSANSNLPSPASSLSTLMTAFQKQGLSTKDLVALSGAHTIG 579
Query: 689 RSHCSSF 709
++ C++F
Sbjct: 580 QARCTTF 600
Score = 40.5 bits (82), Expect(4) = 5e-048
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +2 / +1
Query: 734 SDINPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLT 913
+D N A + +T D+ DV+TP DN+YY N+ S LF SD L
Sbjct: 616 NDTNINAAFATSAKANCPSTGGDNTLSPLDVLTPTTFDNKYYTNLKSQKGLFHSDQELFN 795
Query: 914 SPET 925
T
Sbjct: 796 GGST 807
>gb|CF671224.1|CF671224 RTCNT1_55_D05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_55_D05_A029 5', mRNA sequence
Length = 668
Score = 129 bits (277), Expect(2) = 6e-048
Identities = 57/113 (50%), Positives = 71/113 (62%)
Frame = +2 / +2
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFS 346
L +GYY+ CP AE IV ++ A +P A +IR+ FHDCFV+GCD SVL+D
Sbjct: 29 LAVGYYKNICPAAEPIVLGVVKSAFHSSPEIAAKLIRLHFHDCFVKGCDGSVLIDSISGQ 208
Query: 347 PTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLS 505
EK + NNPSL GF +ID K LE CP VSCADI+AFAARD++ S
Sbjct: 209 FVAEKDSPANNPSLGGFNVIDNAKTLLEKICPKKVSCADIVAFAARDSAFLAS 367
Score = 82.6 bits (174), Expect(2) = 6e-048
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = +2 / +2
Query: 521 FDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHC 700
+D+P+GR DG S AS L PPT N++ L FA+KG+S +++V LSGAHT+G SHC
Sbjct: 389 WDVPAGRKDGNISLASNIPGNLPPPTLNVTQLTKIFAIKGLSQDEMVTLSGAHTIGVSHC 568
Query: 701 SSFGS 715
+SF S
Sbjct: 569 TSFVS 583
>gb|CO199407.1|CO199407 GEO2_1_A09.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_1_A09_A032 3', mRNA sequence
Length = 690
Score = 137 bits (293), Expect(2) = 9e-048
Identities = 60/120 (50%), Positives = 76/120 (63%)
Frame = +2 / -3
Query: 146 QASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVL 325
+A+ + L +GYY+Y CP AE IV A + A +P A +IR+ FHDCFV GCD SVL
Sbjct: 565 RAAVSHNLAVGYYKYICPAAEPIVFAVVSSAFHSSPEIAAKLIRLHFHDCFVRGCDGSVL 386
Query: 326 LDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLS 505
+D EK + NNPSL GF++ID K LE CP VSCADI+AFAARD++ S
Sbjct: 385 IDSIAGQFVAEKDSPANNPSLGGFDVIDNAKSLLEKICPKKVSCADIVAFAARDSALLAS 206
Score = 88.1 bits (186), Expect(2) = 2e-024
Identities = 50/107 (46%), Positives = 60/107 (56%)
Frame = -3 / +3
Query: 486 SRAAKAMMSAQETTPGHAASRASLMASISSNPRRLGLLGAASFSGVGLNGVGSRSTEASQ 307
S AA A MSAQET G S + L SI+SNP RLGLL SFS + S TE S
Sbjct: 225 SLAANATMSAQETFFGQIFSNSDLALSITSNPPRLGLLAGESFSATNWPAMESIRTEPSH 404
Query: 306 PSTKQSWKSMRMTAAPLPGF*AMAFSMLALTIASAWGQV*R*YPSSR 166
P TKQSWK R++ A + G A A T+ SA GQ+ * P++R
Sbjct: 405 PLTKQSWKCKRISLAAISGELWNALLTTANTMGSAAGQIYL**PTAR 545
Score = 74.8 bits (157), Expect(2) = 9e-048
Identities = 31/61 (50%), Positives = 41/61 (67%)
Frame = +2 / -3
Query: 521 FDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHC 700
+D+P+GR DG S AS L PPT N++ L FA KG+S ++V LSGAHT+G SHC
Sbjct: 184 WDVPAGRKDGNISLASNIPGNLPPPTFNVTQLTQIFATKGLSQAEMVTLSGAHTIGVSHC 5
Query: 701 S 703
+
Sbjct: 4 T 2
Score = 45.5 bits (93), Expect(2) = 2e-024
Identities = 26/61 (42%), Positives = 31/61 (50%)
Frame = -3 / +3
Query: 699 QWERPTVCAPERTTRSSSDMPLTAKLEARSLRLDVGGTRNLTDSEALEKVPSRRPDGMSK 520
Q E P VCAP+ T S+ D PL A + + L VGG R EA E PS P G S
Sbjct: 6 Q*ETPIVCAPDNVTISAWDRPLVANI*VSWVTLKVGGGRFPGILEASEIFPSFLPAGTSH 185
Query: 519 E 517
+
Sbjct: 186 Q 188
>gb|DR096260.1|DR096260 STRR1_26_G02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_G02_A033 5', mRNA sequence
Length = 789
Score = 75.3 bits (158), Expect(4) = 9e-048
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +2 / +2
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A PNN SLRGF++ID IK +EA C G+VSCADI+A ARD+
Sbjct: 212 TGEKTALPNNNSLRGFDVIDTIKSQVEAVCSGIVSCADILAITARDS 352
Score = 71.6 bits (150), Expect(4) = 9e-048
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2 / +2
Query: 179 YYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD 331
YY +CP+ A VKA+++ A+A GA+++R+ FHDCFV GCD SVLLD
Sbjct: 44 YYDTSCPKLPATVKAAVKTAVANEKRMGASLLRLHFHDCFVNGCDGSVLLD 196
Score = 66.6 bits (139), Expect(4) = 9e-048
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +2 / +2
Query: 536 GRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSF 709
GR D ++ S + + PTSNLS L SSF +G+S +D++VLSGAHT+G++ C+ F
Sbjct: 392 GRRDSATASLSAANTNIPAPTSNLSGLISSFQAQGLSTKDMIVLSGAHTIGQARCTVF 565
Score = 34.5 bits (69), Expect(4) = 9e-048
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2 / +2
Query: 788 TTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAAL 907
+T D+ + D++TP DN+YY N+ S L SD L
Sbjct: 635 STGGDNNLSLLDLLTPTTFDNKYYTNLKSPKGLLHSDQQL 754
>dbj|BD224561.1| Materials and methods for the modification of plant lignin content
Length = 801
Score = 75.8 bits (159), Expect(4) = 1e-047
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +2 / +1
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A PNN S RGF++ID IK +EA C GVVSCADI+A AARD+
Sbjct: 259 TGEKTAVPNNNSARGFDVIDTIKSQVEAVCSGVVSCADILAIAARDS 399
Score = 72.5 bits (152), Expect(4) = 1e-047
Identities = 27/63 (42%), Positives = 41/63 (65%)
Frame = +2 / +1
Query: 143 CQASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASV 322
C Y L +Y +CP+ + V+A++++A+A GA+++R+ FHDCFV GCD SV
Sbjct: 55 CSTVAYAQLSATFYNTSCPKLLSTVQAAVKQAVANEKRMGASLLRLHFHDCFVNGCDGSV 234
Query: 323 LLD 331
LLD
Sbjct: 235 LLD 243
Score = 66.6 bits (139), Expect(4) = 1e-047
Identities = 29/67 (43%), Positives = 44/67 (65%)
Frame = +2 / +1
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G ++ + GR D ++ S + + PTSNLS L S F +G+S +D+VVLSGAHT+G
Sbjct: 412 GGPTWTVQLGRRDSRTASLSGANNNIPAPTSNLSALISLFQAQGLSTKDMVVLSGAHTIG 591
Query: 689 RSHCSSF 709
++ C+SF
Sbjct: 592 QARCTSF 612
Score = 32.7 bits (65), Expect(4) = 1e-047
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +2 / +1
Query: 788 TTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAAL 907
TT SD+ D VTP D YY N+ S L SD L
Sbjct: 682 TTGSDNNLSPLDRVTPTTFDINYYSNLRSQKGLLHSDQQL 801
>gb|CF391763.1|CF391763 RTDR3_11_E05.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_11_E05_A022 5', mRNA
sequence
Length = 731
Score = 90.4 bits (191), Expect(3) = 1e-047
Identities = 37/77 (48%), Positives = 50/77 (64%)
Frame = +2 / +2
Query: 149 ASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLL 328
A+P L+ YY++TCPQA AI+ A +++A AQ A+++R+ FHDCFV GCD SVLL
Sbjct: 113 ANPQGALQPDYYQWTCPQAAAIISAGVQRAAAQEARMAASLLRLHFHDCFVNGCDGSVLL 292
Query: 329 DPTPFSPTPEKLAAPNN 379
D TP + A NN
Sbjct: 293 DDTPTFEGEKTAAPNNN 343
Score = 80.8 bits (170), Expect(3) = 1e-047
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +2 / +2
Query: 356 EKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
EK AAPNN S+RGFE+IDAIK LE+ACPG VSCADI+A ARD+
Sbjct: 317 EKTAAPNNNSIRGFEVIDAIKKELESACPGKVSCADILAVVARDS 451
Score = 58.3 bits (121), Expect(3) = 1e-047
Identities = 24/67 (35%), Positives = 41/67 (61%)
Frame = +2 / +2
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+++ G D ++ + + + PPTS++S L ++F G++ DLV LSGAHT+G
Sbjct: 464 GGPSWEVLLGSRDSLTASKAAANNGIAPPTSDISALVANFKGVGLTQNDLVALSGAHTIG 643
Query: 689 RSHCSSF 709
+ C +F
Sbjct: 644 NARCQTF 664
>gb|CX715978.1|CX715978 RTPQ1_39_D06.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_39_D06_A032 3', mRNA sequence
Length = 708
Score = 83.5 bits (176), Expect(3) = 2e-047
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = +2 / -2
Query: 515 VSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRS 694
+ +D+P+GR DG S ASE + PT N+S L FA KG+S +D+V+LSGAH++G S
Sbjct: 518 LGWDVPAGRRDGIISLASEVATNIPAPTFNVSQLTQRFASKGLSQKDMVILSGAHSIGVS 339
Query: 695 HCSSFGS 715
HCSSF S
Sbjct: 338 HCSSFVS 318
Score = 75.8 bits (159), Expect(3) = 2e-047
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = +2 / -2
Query: 335 TPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
TP T EK + NNPSL GF++I+ K LEA CP VSCADI+AFAARD++
Sbjct: 704 TPCHNTAEKDSPVNNPSLHGFDVIETAKSRLEAICPNTVSCADIVAFAARDST 546
Score = 69.8 bits (146), Expect(3) = 2e-047
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = +2 / -2
Query: 740 INPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSP 919
++P AA L+ +CP + +++ TV D TP +DN YYK +L LFTSDA LLT
Sbjct: 275 LDPKYAALLKEKCPQGSPSNNITTVFMDTYTPETIDNLYYKGLLKKHGLFTSDATLLTDR 96
Query: 920 ETAKLVLDNA 949
TA +V +A
Sbjct: 95 NTATVVKASA 66
>gb|DT634752.1|DT634752 EST1149683 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG941 3' end, mRNA sequence
Length = 702
Score = 79.9 bits (168), Expect(3) = 3e-047
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +2 / +2
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A PNN SLRGF+ +D IK LEAAC GVVSCADI+A AARD+
Sbjct: 281 TGEKTAKPNNNSLRGFDAVDTIKSQLEAACSGVVSCADIVAIAARDS 421
Score = 78.0 bits (164), Expect(3) = 3e-047
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +2 / +2
Query: 143 CQASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASV 322
C + Y L G+Y +CP +IV + +++AIAQ GA+++R+ FHDCFV GCD SV
Sbjct: 77 CSPAIYGQLSSGFYNQSCPNVLSIVNSVVQQAIAQEKRMGASLLRLHFHDCFVNGCDGSV 256
Query: 323 LLD 331
LLD
Sbjct: 257 LLD 265
Score = 70.7 bits (148), Expect(3) = 3e-047
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +2 / +2
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+ + GR D T ++ S + + PPTSNLS L SSF G+S +D+V L+G+HT+G
Sbjct: 434 GGPSWTVLLGRRDSTTASLSAANNLIPPPTSNLSALISSFGAVGLSPDDMVALAGSHTIG 613
Query: 689 RSHCSSF 709
++ C++F
Sbjct: 614 QARCTTF 634
>gb|CF671964.1|CF671964 RTCNT1_60_A05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_A05_A029 5', mRNA sequence
Length = 756
Score = 84.9 bits (179), Expect(3) = 4e-047
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +2 / +2
Query: 506 QGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTV 685
Q + +D+P+GR DG S ASE + + PT N+S L SFA KG+S +D+V+LSGAH++
Sbjct: 479 QCPLGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSI 658
Query: 686 GRSHCSSF 709
G SHC+SF
Sbjct: 659 GVSHCTSF 682
Score = 72.5 bits (152), Expect(3) = 4e-047
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2 / +2
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
T EK + NNPSL GF++ID K LE CP VSCADI+AFAARD++
Sbjct: 317 TAEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDSA 460
Score = 70.7 bits (148), Expect(3) = 4e-047
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +2 / +2
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
LE+G+Y Y+CP+AE+ V + A + +IRM FHDCFV GCD SVL+D T
Sbjct: 137 LEVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDST 307
>gb|DR683429.1|DR683429 EST1073505 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAH09 3' end, mRNA sequence
Length = 752
Score = 84.9 bits (179), Expect(3) = 4e-047
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +2 / +1
Query: 506 QGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTV 685
Q + +D+P+GR DG S ASE + + PT N+S L SFA KG+S +D+V+LSGAH++
Sbjct: 517 QCPLGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSI 696
Query: 686 GRSHCSSF 709
G SHC+SF
Sbjct: 697 GVSHCTSF 720
Score = 72.5 bits (152), Expect(3) = 4e-047
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2 / +1
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
T EK + NNPSL GF++ID K LE CP VSCADI+AFAARD++
Sbjct: 355 TAEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDSA 498
Score = 70.7 bits (148), Expect(3) = 4e-047
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +2 / +1
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
LE+G+Y Y+CP+AE+ V + A + +IRM FHDCFV GCD SVL+D T
Sbjct: 175 LEVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDST 345
>gb|CF672738.1|CF672738 RTCNT1_73_D06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_73_D06_A029 5', mRNA sequence
Length = 692
Score = 84.9 bits (179), Expect(3) = 4e-047
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +2 / +2
Query: 506 QGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTV 685
Q + +D+P+GR DG S ASE + + PT N+S L SFA KG+S +D+V+LSGAH++
Sbjct: 458 QCPLGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSI 637
Query: 686 GRSHCSSF 709
G SHC+SF
Sbjct: 638 GVSHCTSF 661
Score = 72.5 bits (152), Expect(3) = 4e-047
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2 / +2
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
T EK + NNPSL GF++ID K LE CP VSCADI+AFAARD++
Sbjct: 296 TAEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDSA 439
Score = 70.7 bits (148), Expect(3) = 4e-047
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +2 / +2
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
LE+G+Y Y+CP+AE+ V + A + +IRM FHDCFV GCD SVL+D T
Sbjct: 116 LEVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDST 286
>gb|CO201890.1|CO201890 RTCNT2_8_F12.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_8_F12_A029 5', mRNA sequence
Length = 766
Score = 83.1 bits (175), Expect(3) = 5e-047
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +2 / +3
Query: 506 QGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTV 685
Q + +D+P+GR DG S ASE + PT N++ L SFA KG+S +D+V+LSGAH++
Sbjct: 465 QYPLGWDVPAGRRDGIISLASEVATNIPAPTFNVNQLTQSFASKGLSQKDMVILSGAHSI 644
Query: 686 GRSHCSSF 709
G SHC+SF
Sbjct: 645 GVSHCTSF 668
Score = 73.0 bits (153), Expect(3) = 5e-047
Identities = 29/57 (50%), Positives = 37/57 (64%)
Frame = +2 / +3
Query: 167 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPT 337
LE+G+Y Y+CP+AE+ V + A N +IRM FHDCFV GCD SVL+D T
Sbjct: 123 LEVGFYDYSCPKAESTVFEVVRDAFLNNREVAPGLIRMHFHDCFVRGCDGSVLIDST 293
Score = 71.6 bits (150), Expect(3) = 5e-047
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +2 / +3
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDAS 493
T EK + NNPSL GF++ID K LE CP +SCADI+AFAARD++
Sbjct: 303 TAEKDSIVNNPSLHGFDVIDTAKSRLETICPNTISCADILAFAARDSA 446
>gb|CF401192.1|CF401192 RTWW1_10_H07.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_10_H07_A015 5', mRNA sequence
Length = 799
Score = 71.2 bits (149), Expect(4) = 1e-046
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +2 / +2
Query: 350 TPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T EK A N S+RGF+++D IK LEAAC GVVSCADI+A AARD+
Sbjct: 161 TGEKTAGANANSVRGFDVVDTIKTNLEAACSGVVSCADILAIAARDS 301
Score = 67.0 bits (140), Expect(4) = 1e-046
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +2 / +2
Query: 191 TCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD 331
+CP A +IV A+++ A+A GA+++R+ FHDCFV+GCD S+LLD
Sbjct: 5 SCPTALSIVNAAVKNAVASEKRMGASLLRLHFHDCFVQGCDGSILLD 145
Score = 65.7 bits (137), Expect(4) = 1e-046
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = +2 / +2
Query: 509 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 688
G S+ + GR D T ++ S + L P S+LS L ++F +G+S +DLV LSGAHT+G
Sbjct: 314 GGRSYTVQLGRRDSTTASLSSANSNLPSPASSLSTLMTAFQKQGLSTKDLVALSGAHTIG 493
Query: 689 RSHCSSF 709
++ C++F
Sbjct: 494 QARCTTF 514
Score = 40.5 bits (82), Expect(4) = 1e-046
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +2 / +2
Query: 734 SDINPALAAFLRTRCPANTTTSDDPTVMQDVVTPNAMDNQYYKNVLSHTVLFTSDAALLT 913
+D N A + +T D+ DV+TP DN+YY N+ S LF SD L
Sbjct: 530 NDTNINAAFATSAKANCPSTGGDNTLSPLDVLTPTTFDNKYYTNLKSQKGLFHSDQELFN 709
Query: 914 SPET 925
T
Sbjct: 710 GGST 721
>gb|DR093649.1|DR093649 STRR1_9_C07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_9_C07_A033 5', mRNA sequence
Length = 875
Score = 120 bits (256), Expect(3) = 1e-046
Identities = 50/112 (44%), Positives = 74/112 (66%)
Frame = +2 / +1
Query: 155 PYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDP 334
P + L +Y+ +CP EAIVK+ +E A+ ++ A ++R+ FHDCFV+GCD SVLL
Sbjct: 10 PVHGLSWTFYKDSCPDLEAIVKSVLEPALDEDITQAAGLLRLHFHDCFVQGCDGSVLLTG 189
Query: 335 TPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDA 490
T +P+ ++ R +LID IK A+EA+C GVV+CADI+A AAR++
Sbjct: 190 TKRNPSEQQAQPNLTLRARALQLIDEIKTAVEASCSGVVTCADILALAARES 345
Score = 59.3 bits (123), Expect(3) = 1e-046
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = +2 / +1
Query: 554 FSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSF 709
F++ S + + PT NL+ L + F KG SL DLV LSG HT+G HC+SF
Sbjct: 406 FASQSVVLANIPAPTLNLTQLMNIFGSKGFSLADLVALSGGHTIGIGHCNSF 561
Score = 52.8 bits (109), Expect(3) = 1e-046
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +2 / +1
Query: 821 DVVTPNAMDNQYYKNVLSHTVLFTSDAALLTSPETAKLVLDNAKIPGWWEDKFEKAMVKM 1000
D+ TPNA D +YY NV + LFTSD +L T ++A++V A + KF M KM
Sbjct: 688 DIQTPNAFDKKYYANVQKNQALFTSDQSLYTETDSAEIVDSFASSQTVFFKKFVHGMHKM 867
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 584,896,803
Number of Sequences: 355925
Number of extensions: 8072638
Number of successful extensions: 62611
Number of sequences better than 1.0e-020: 894
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 21973993335
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)