TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2594405.2.1
         (637 letters)

Database: Pinus_nucl_with_EST.fasta 
           355,925 sequences; 217,277,237 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|DR014396.1|DR014396  HEAT1_49_F01.b1_A029 Root at 37 C fo...   145   2e-061
gb|DR110436.1|DR110436  RTS1_10_H02.g1_A029 Roots minus sulf...   145   3e-037

>gb|DR014396.1|DR014396 HEAT1_49_F01.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
           HEAT1_49_F01_A029 3', mRNA sequence
          Length = 864

 Score =  145 bits (311), Expect(2) = 2e-061
 Identities = 54/80 (67%), Positives = 68/80 (85%)
 Frame = -2 / +1

                                                                       
Query: 636 DRGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFL 457
           +RGAPVGGIG+QGHI++P G I+  +L+ ++ILGLPIW TE+DV + NE +RADDLEV L
Sbjct: 79  ERGAPVGGIGIQGHITYPAGSIVHTALNTMSILGLPIWFTEMDVYSTNEFVRADDLEVML 258

                               
Query: 456 REAFAHPAVGGIILWGFWEM 397
           REAFAHPAV GI+ WGFWE+
Sbjct: 259 REAFAHPAVEGIMFWGFWEL 318




 Score =  110 bits (235), Expect(2) = 2e-061
 Identities = 40/78 (51%), Positives = 58/78 (74%)
 Frame = -2 / +1

                                                                       
Query: 387 REHAHLVDADGTINEAGRRYLALKQEWLTRMNGSVDHQGEFKFRGYHGSYTVEVNTPSGK 208
           RE  HLVD DGT+NEAG+R+++LK+EW T + G  DH+G+FKFRG+HG+Y VEV+  S +
Sbjct: 325 REQGHLVDWDGTLNEAGKRFISLKKEWTTNIKGHTDHEGQFKFRGFHGTYEVEVSVHSRE 504

                             
Query: 207 VARSFVVDKDSPVQVIAL 154
           + ++F VDK     V+ +
Sbjct: 505 IRQTFTVDKGDSPIVVEI 558




 Score = 68.0 bits (142), Expect(2) = 8e-023
 Identities = 33/79 (41%), Positives = 39/79 (49%)
 Frame = +2 / -2

                                                                       
Query: 401 SQNPQRMIPPTAGCXXXXXXXXXXXXXXMCSFSAVTSNSVIQIGRPSMASLSRESHMISP 580
           SQ PQ +IP TAGC                S    TS SV QIG P +  + +    + P
Sbjct: 314 SQKPQNIIPSTAGCAKASRSITSKSSALTNSLVE*TSISVNQIGSPKIDIVFKAVCTMEP 135

                              
Query: 581 TGWLI*PCTPIPPTGAPLS 637
            G +I PC PIPPTGAP S
Sbjct: 134 AG*VIWPCIPIPPTGAPRS 78




 Score = 58.8 bits (122), Expect(2) = 8e-023
 Identities = 35/68 (51%), Positives = 36/68 (52%)
 Frame = +2 / -2

                                                                       
Query: 182 LSTTNDLATLPEGVFTSTVYEPWYPLNLNSPW*STLPFIRVSHSCLRARYLLPASLIVPS 361
           LST        E   TST   P  PLNLN P *S  PF+ V HS  R   L PASL VPS
Sbjct: 530 LSTVKVCLISLECTETSTS*VP*KPLNLNWPS*SVWPFMFVVHSFFREMNLFPASLSVPS 351

                   
Query: 362 ASTRWACS 385
            STR  CS
Sbjct: 350 QSTRCPCS 327



>gb|DR110436.1|DR110436 RTS1_10_H02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
           RTS1_10_H02_A029 5', mRNA sequence
          Length = 866

 Score =  145 bits (311), Expect(2) = 3e-037
 Identities = 54/80 (67%), Positives = 68/80 (85%)
 Frame = -2 / +2

                                                                       
Query: 636 DRGAPVGGIGVQGHISHPVGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFL 457
           +RGAPVGGIG+QGHI++P G I+  +L+ ++ILGLPIW TE+DV + NE +RADDLEV L
Sbjct: 575 ERGAPVGGIGIQGHITYPAGSIVHTALNTMSILGLPIWFTEMDVYSTNEFVRADDLEVML 754

                               
Query: 456 REAFAHPAVGGIILWGFWEM 397
           REAFAHPAV GI+ WGFWE+
Sbjct: 755 REAFAHPAVEGIMFWGFWEL 814




 Score = 29.9 bits (59), Expect(2) = 3e-037
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2 / +2

                          
Query: 387 REHAHLVDADGTINE 343
           RE  HLVD DGT+NE
Sbjct: 821 REQGHLVDWDGTLNE 865



  Database: Pinus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:45 PM
  Number of letters in database: 217,277,237
  Number of sequences in database:  355,925
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 385,890,254
Number of Sequences: 355925
Number of extensions: 6275787
Number of successful extensions: 90595
Number of sequences better than 1.0e-020: 2
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 8683771200
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)