TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576652.2.5
(1033 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX252375.1|BX252375 BX252375 Pinus pinaster differenciat... 381 e-105
gb|CF473119.1|CF473119 RTDS1_1_C07.g1_A015 Drought-stressed... 381 e-105
gb|AW981614.1|AW981614 PC14F09 Pine TriplEx pollen cone lib... 380 e-105
gb|CF668112.1|CF668112 RTCNT1_34_A11.g1_A029 Root control P... 380 e-105
gb|DN463765.1|DN463765 EST959564 Sequencing ESTs from loblo... 380 e-105
gb|CF473592.1|CF473592 RTWW2_3_A05.g1_A021 Well-watered lob... 378 e-104
gb|BX680840.1|BX680840 BX680840 RS Pinus pinaster cDNA clon... 366 e-100
gb|DT627323.1|DT627323 EST1160399 Sequencing ESTs from lobl... 347 1e-094
gb|DR681750.1|DR681750 EST1071825 Normalized pine embryo li... 344 5e-094
gb|BX254088.1|BX254088 BX254088 Pinus pinaster differenciat... 338 4e-092
gb|AW043371.1|AW043371 ST32E12 Pine TriplEx shoot tip libra... 309 2e-083
gb|DR110673.1|DR110673 RTS1_12_F08.b1_A029 Roots minus sulf... 302 3e-081
gb|DT637807.1|DT637807 EST1152738 Normalized pine embryo li... 219 3e-080
gb|DR692633.1|DR692633 EST1082721 Normalized pine embryo li... 219 3e-080
gb|DR683136.1|DR683136 EST1073212 Normalized pine embryo li... 246 2e-064
gb|CF389415.1|CF389415 RTDR2_7_A04.b1_A021 Loblolly pine ro... 233 1e-060
gb|DR113052.1|DR113052 RTS1_32_D10.g1_A029 Roots minus sulf... 200 1e-050
gb|DR683137.1|DR683137 EST1073213 Normalized pine embryo li... 185 5e-046
gb|AW438035.1|AW438035 ST83G04 Pine TriplEx shoot tip libra... 148 6e-035
gb|BI397852.1|BI397852 NXPV_108_E04_F NXPV (Nsf Xylem Plani... 102 9e-033
gb|BM367466.1|BM367466 NXLV_049_F07_F NXLV (Nsf Xylem Late ... 136 3e-031
gb|CX649415.1|CX649415 COLD1_35_D06.b1_A029 Root cold Pinus... 102 5e-021
>gb|BX252375.1|BX252375 BX252375 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP063E10, mRNA sequence
Length = 690
Score = 381 bits (826), Expect = e-105
Identities = 158/194 (81%), Positives = 176/194 (90%)
Frame = -3 / +1
Query: 917 VISPPESRGRGSDMGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSE 738
++ E G MG +GDT+ES+RS+QIRQV+MQ ISLGMIVTSALIIWKGL+ TGSE
Sbjct: 40 IVERGEQSRGGEKMGMIGDTIESLRSLQIRQVVMQAISLGMIVTSALIIWKGLMCVTGSE 219
Query: 737 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDT 558
SPVVVVLSGSMEPGFKRGDILFLHMSK PIR GEIVVF+VDGREIPIVHRVIKVHERQ+T
Sbjct: 220 SPVVVVLSGSMEPGFKRGDILFLHMSKAPIRAGEIVVFHVDGREIPIVHRVIKVHERQET 399
Query: 557 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLL 378
EV++LTKGDNN+GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKP IKY+L
Sbjct: 400 GEVEVLTKGDNNYGDDRLLYAQGQLWLQKHHIMGRAVGFLPYVGWVTILMTEKPLIKYIL 579
Query: 377 IGALGLLVITSKD* 336
IGALGLLVITSK+*
Sbjct: 580 IGALGLLVITSKE* 621
Score = 291 bits (630), Expect = 5e-078
Identities = 134/183 (73%), Positives = 146/183 (79%)
Frame = +1 / -2
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSP 519
SFDV+TSKP+API YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP
Sbjct: 617 SFDVITSKPNAPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP 438
Query: 520 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRISPLLNP 699
LLSPLVR STS VS RS T ITR TIGISRPST KTTISP R+G+LLIC+N ISPLLNP
Sbjct: 437 *LLSPLVRTSTSPVSCRSCTFITR*TIGISRPSTWKTTISPARMGALLICRNNISPLLNP 258
Query: 700 GSMLPESTTTTGDSLPVKTIKPFHMINAEVTIIPRLMICMSTWRICMERIDSIVSPTNPI 879
GSMLPESTTTTGDSLPV I PFH+I A+VTIIPRLM CM+T I +R DSIVSP PI
Sbjct: 257 GSMLPESTTTTGDSLPVTHISPFHIIKADVTIIPRLMACMTTCLIWRDRRDSIVSPIIPI 78
Query: 880 SLP 888
P
Sbjct: 77 FSP 69
Score = 189 bits (407), Expect = 3e-047
Identities = 82/186 (44%), Positives = 117/186 (62%)
Frame = +3 / -1
Query: 333 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI**SV 512
SL FRRY QQ QC+ Q VL+ H NC+PANIW + +H ++LL P L + I +
Sbjct: 624 SLFFRRYYQQTQCSYQNVLD*GLFGHKNCHPANIW*KPNSAAHYMMLL*P*LTLSIQKPI 445
Query: 513 IPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITPF 692
I I++ F +D + S L+FM L ++++ N +TI++E+N FS N F HMQKQ I PF
Sbjct: 444 ISIIVIPFSKDFNLTSFLSFMYLYNTMNYRNFSTINMEDNNFSSTNGCFTHMQKQYIAPF 265
Query: 693 KSRLHATREHHYNW*LAPRENYQTLPYD*CRGNNHTEADDLHEHLADLHGADRLHRVSDE 872
KSR HAT +H+YNW* + +Q+ PY +NH+EAD LH+HL++L G + R++
Sbjct: 264 KSRFHAT*KHNYNW*FTSCDTHQSFPYYQS*CDNHSEADGLHDHLSNLEGPEGFDRITYH 85
Query: 873 PHIAPS 890
PH S
Sbjct: 84 PHFFTS 67
Score = 130 bits (279), Expect = 1e-029
Identities = 68/175 (38%), Positives = 95/175 (54%)
Frame = -2 / +3
Query: 861 HDGVDPLHADPPSAHADHQPRYDCYLCINHMEGFDSFHGERVTSCSGALG*HGAWI*KG* 682
+D + P+ D HA HQPR DC++ ++ME D H + +TSCS A *HG WI*KG
Sbjct: 96 YDRIPPVPPD*TGGHAGHQPRNDCHISFDNMERTDVCHRK*ITSCSCAFR*HGTWI*KGR 275
Query: 681 YPVFAYEQRSYSHRRNSCFQCRWS*DSNCPPSD*GP*TSGHCRSGHPHQR*Q*FWG*PTI 502
Y V AYE ++S RN C C WS +S G *T+ + P+ R W *
Sbjct: 276 YIVSAYE*STHSCWRNCCLPC*WSRNSYSSSCYKGT*TTRNW*G*SPY*RG*QLWR**AF 455
Query: 501 ICTWPALAPATPHYGTCGGLPSICWLGYNYHD*ETIY*VPADWRTGLAGHNVERL 337
+C+ A+A + G + +ICWLG N +D + + V +D G AG+NVER+
Sbjct: 456 VCSRSAMATEASYNGPRCWVFTICWLGDNSYDRKALNQVHSDRSIGFAGNNVERI 620
Score = 69.3 bits (145), Expect(2) = 6e-021
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -1 / +2
Query: 772 YGRV**FSRGASHQL*WCSRVAWSLDLKGVISCFCI*AKILFAQEK*LFSMSMVVRF 602
YG+ * S+ +HQL* C +VAW+LDLKG I CFCI* K F EK L SM MV +F
Sbjct: 185 YGKD*CVSQEVNHQL*LCFQVAWNLDLKGAIYCFCI*VKHPFVLEKLLSSMLMVEKF 355
Score = 51.9 bits (107), Expect(2) = 6e-021
Identities = 31/83 (37%), Positives = 40/83 (48%)
Frame = -1 / +2
Query: 580 RSMNVRTLQKWTSSPKVTIILGMTDYYMHMASFGSSNTTLWDVRWATFHMLAGLQLS*LR 401
R MN + L + S K I+ M + M S+G + W +HMLAG Q * +
Sbjct: 377 RYMNDKKLVRLKSLLKGITIMEMIGFCMLKVSYGYRSII*WAALLGFYHMLAG*QFL*PK 556
Query: 400 NHLLSTC*LAHWACWS*RRKISD 332
+ ST * HW CW *RRK D
Sbjct: 557 SP*SSTF**EHWVCW**RRKNRD 625
>gb|CF473119.1|CF473119 RTDS1_1_C07.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_1_C07_A015 5', mRNA sequence
Length = 631
Score = 381 bits (826), Expect = e-105
Identities = 158/194 (81%), Positives = 176/194 (90%)
Frame = -3 / +1
Query: 917 VISPPESRGRGSDMGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSE 738
++ E G MG +GDT+ES+RS+QIRQV+MQ ISLGMIVTSALIIWKGL+ TGSE
Sbjct: 1 IVERGEQSRGGEKMGMIGDTIESLRSLQIRQVVMQAISLGMIVTSALIIWKGLMCVTGSE 180
Query: 737 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDT 558
SPVVVVLSGSMEPGFKRGDILFLHMSK PIR GEIVVF+VDGREIPIVHRVIKVHERQ+T
Sbjct: 181 SPVVVVLSGSMEPGFKRGDILFLHMSKAPIRAGEIVVFHVDGREIPIVHRVIKVHERQET 360
Query: 557 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLL 378
EV++LTKGDNN+GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKP IKY+L
Sbjct: 361 GEVEVLTKGDNNYGDDRLLYAQGQLWLQKHHIMGRAVGFLPYVGWVTILMTEKPLIKYIL 540
Query: 377 IGALGLLVITSKD* 336
IGALGLLVITSK+*
Sbjct: 541 IGALGLLVITSKE* 582
Score = 290 bits (628), Expect = 1e-077
Identities = 134/183 (73%), Positives = 146/183 (79%)
Frame = +1 / -3
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSP 519
SFDV+TSKP+API YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP
Sbjct: 578 SFDVITSKPNAPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP 399
Query: 520 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRISPLLNP 699
LLSPLVR STS VS RS T ITR TIGISRPST KTTISP R+G+LLIC+N ISPLLNP
Sbjct: 398 *LLSPLVRTSTSPVSCRSCTFITR*TIGISRPST*KTTISPARMGALLICRNNISPLLNP 219
Query: 700 GSMLPESTTTTGDSLPVKTIKPFHMINAEVTIIPRLMICMSTWRICMERIDSIVSPTNPI 879
GSMLPESTTTTGDSLPV I PFH+I A+VTIIPRLM CM+T I +R DSIVSP PI
Sbjct: 218 GSMLPESTTTTGDSLPVTHISPFHIIKADVTIIPRLMACMTTCLIWSDRRDSIVSPIIPI 39
Query: 880 SLP 888
P
Sbjct: 38 FSP 30
Score = 185 bits (399), Expect = 4e-046
Identities = 81/186 (43%), Positives = 117/186 (62%)
Frame = +3 / -2
Query: 333 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI**SV 512
SL FRRY QQ QC+ Q VL+ SH NC+P NIW + +H ++LL P L + I +
Sbjct: 585 SLFFRRYYQQTQCSYQNVLD*GLFSHKNCHPTNIW*KPNSAAHYMMLL*P*LTLSIQKPI 406
Query: 513 IPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITPF 692
I I++ F +D + S L+FM L ++++ N +TI++++N FS N F HMQKQ ITPF
Sbjct: 405 ISIIVIPFSKDFNLPSFLSFMYLYNTMNYRNFSTINMKDNNFSSTNGCFTHMQKQYITPF 226
Query: 693 KSRLHATREHHYNW*LAPRENYQTLPYD*CRGNNHTEADDLHEHLADLHGADRLHRVSDE 872
KSR HAT +H+YNW* + +Q+ PY +NH+EAD LH+HL++L + R++
Sbjct: 225 KSRFHAT*KHNYNW*FTSCDTHQSFPYYQS*RDNHSEADGLHDHLSNLERPEGFDRITYH 46
Query: 873 PHIAPS 890
PH S
Sbjct: 45 PHFFTS 28
Score = 136 bits (291), Expect = 3e-031
Identities = 70/175 (40%), Positives = 97/175 (55%)
Frame = -2 / +3
Query: 861 HDGVDPLHADPPSAHADHQPRYDCYLCINHMEGFDSFHGERVTSCSGALG*HGAWI*KG* 682
+D + P+ D HA HQPR DC++ ++ME D H + +TSCS A *HG WI*KG*
Sbjct: 57 YDRIPPVAPD*TGGHAGHQPRNDCHVSFDNMERTDVCHRK*ITSCSCAFR*HGTWI*KG* 236
Query: 681 YPVFAYEQRSYSHRRNSCFQCRWS*DSNCPPSD*GP*TSGHCRSGHPHQR*Q*FWG*PTI 502
Y V AYE ++S RN C C WS +S G *T+ + P+ R W *
Sbjct: 237 YIVSAYE*STHSCWRNCCLSC*WSRNSYSSSCYKGT*TTRNWGG*SPY*RG*QLWR**AF 416
Query: 501 ICTWPALAPATPHYGTCGGLPSICWLGYNYHD*ETIY*VPADWRTGLAGHNVERL 337
+C+ A+A + G + +ICWLG N +D*+ + V +D G AG+NVER+
Sbjct: 417 VCSRSAMATEASYNGPRCWVFTICWLGDNSYD*KALNQVHSDRSIGFAGNNVERI 581
Score = 68.4 bits (143), Expect(2) = 5e-021
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -1 / +2
Query: 772 YGRV**FSRGASHQL*WCSRVAWSLDLKGVISCFCI*AKILFAQEK*LFSMSMVVRF 602
YG+ * S+ +HQL* C +VAW+LDLKGVI CFCI* K F EK L M MV +F
Sbjct: 146 YGKD*CVSQEVNHQL*LCFQVAWNLDLKGVIYCFCI*VKHPFVLEKLLSFMLMVEKF 316
Score = 53.3 bits (110), Expect(2) = 5e-021
Identities = 31/83 (37%), Positives = 40/83 (48%)
Frame = -1 / +2
Query: 580 RSMNVRTLQKWTSSPKVTIILGMTDYYMHMASFGSSNTTLWDVRWATFHMLAGLQLS*LR 401
R MN + L + S K I+ M + M S+G + W +HML G Q *L+
Sbjct: 338 RYMNDKKLGRLKSLLKGITIMEMIGFCMLKVSYGYRSII*WAALLGFYHMLVG*QFL*LK 517
Query: 400 NHLLSTC*LAHWACWS*RRKISD 332
+ ST * HW CW *RRK D
Sbjct: 518 SP*SSTF**EHWVCW**RRKNRD 586
>gb|AW981614.1|AW981614 PC14F09 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC14F09, mRNA sequence
Length = 598
Score = 380 bits (825), Expect = e-105
Identities = 157/194 (80%), Positives = 176/194 (90%)
Frame = -3 / +2
Query: 917 VISPPESRGRGSDMGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSE 738
++ E G MG +GDT+ES+RS+QIRQV+MQ ISLGMIVTSALIIWKGL+ TGSE
Sbjct: 14 IVERGEQSRGGEKMGMIGDTIESLRSLQIRQVVMQAISLGMIVTSALIIWKGLMCVTGSE 193
Query: 737 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDT 558
SPVVVVLSGSMEPGFKRGDILFLHMSK PIR GEIVVF++DGREIPIVHRVIKVHERQ+T
Sbjct: 194 SPVVVVLSGSMEPGFKRGDILFLHMSKAPIRAGEIVVFHIDGREIPIVHRVIKVHERQET 373
Query: 557 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLL 378
EV++LTKGDNN+GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKP IKY+L
Sbjct: 374 GEVEVLTKGDNNYGDDRLLYAQGQLWLQKHHIMGRAVGFLPYVGWVTILMTEKPLIKYIL 553
Query: 377 IGALGLLVITSKD* 336
IGALGLLVITSK+*
Sbjct: 554 IGALGLLVITSKE* 595
Score = 287 bits (622), Expect = 7e-077
Identities = 133/183 (72%), Positives = 145/183 (79%)
Frame = +1 / -2
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSP 519
SFDV+TSKP+API YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP
Sbjct: 591 SFDVITSKPNAPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP 412
Query: 520 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRISPLLNP 699
LLSPLVR STS VS RS T ITR TIGISRPS KTTISP R+G+LLIC+N ISPLLNP
Sbjct: 411 *LLSPLVRTSTSPVSCRSCTFITR*TIGISRPSI*KTTISPARMGALLICRNNISPLLNP 232
Query: 700 GSMLPESTTTTGDSLPVKTIKPFHMINAEVTIIPRLMICMSTWRICMERIDSIVSPTNPI 879
GSMLPESTTTTGDSLPV I PFH+I A+VTIIPRLM CM+T I +R DSIVSP PI
Sbjct: 231 GSMLPESTTTTGDSLPVTHISPFHIIKADVTIIPRLMACMTTCLIWSDRRDSIVSPIIPI 52
Query: 880 SLP 888
P
Sbjct: 51 FSP 43
Score = 183 bits (395), Expect = 1e-045
Identities = 80/186 (43%), Positives = 116/186 (62%)
Frame = +3 / -1
Query: 333 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI**SV 512
SL FRRY QQ QC+ Q VL+ H NC+P NIW + +H ++LL P L + I +
Sbjct: 598 SLFFRRYYQQTQCSYQNVLD*GLFGHKNCHPTNIW*KPNSAAHYMMLL*P*LTLSIQKPI 419
Query: 513 IPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITPF 692
I I++ F +D + S L+FM L ++++ N +TI++++N FS N F HMQKQ ITPF
Sbjct: 418 ISIIVIPFSKDFNLPSFLSFMYLYNTMNYRNFSTINMKDNNFSSTNGCFTHMQKQYITPF 239
Query: 693 KSRLHATREHHYNW*LAPRENYQTLPYD*CRGNNHTEADDLHEHLADLHGADRLHRVSDE 872
KSR HAT +H+YNW* + +Q+ PY +NH+EAD LH+HL++L + R++
Sbjct: 238 KSRFHAT*KHNYNW*FTSCDTHQSFPYYQS*RDNHSEADGLHDHLSNLERPEGFDRITYH 59
Query: 873 PHIAPS 890
PH S
Sbjct: 58 PHFFTS 41
Score = 128 bits (275), Expect = 5e-029
Identities = 68/175 (38%), Positives = 95/175 (54%)
Frame = -2 / +1
Query: 861 HDGVDPLHADPPSAHADHQPRYDCYLCINHMEGFDSFHGERVTSCSGALG*HGAWI*KG* 682
+D + P+ D HA HQPR DC++ ++ME D H + +TSCS A *HG WI*KG*
Sbjct: 70 YDRIPPVAPD*TGGHAGHQPRNDCHVSFDNMERTDVCHRK*ITSCSCAFR*HGTWI*KG* 249
Query: 681 YPVFAYEQRSYSHRRNSCFQCRWS*DSNCPPSD*GP*TSGHCRSGHPHQR*Q*FWG*PTI 502
Y V AYE ++S RN C WS +S G *T+ + P+ R W *
Sbjct: 250 YIVSAYE*STHSCWRNCCLSY*WSRNSYSSSCYKGT*TTRNWGG*SPY*RG*QLWR**AF 429
Query: 501 ICTWPALAPATPHYGTCGGLPSICWLGYNYHD*ETIY*VPADWRTGLAGHNVERL 337
+C+ A+A + G + +ICWLG N +D + + V +D G AG+NVER+
Sbjct: 430 VCSRSAMATEASYNGPRCWVFTICWLGDNSYDRKALNQVHSDRSIGFAGNNVERI 594
>gb|CF668112.1|CF668112 RTCNT1_34_A11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_34_A11_A029 5', mRNA sequence
Length = 763
Score = 380 bits (824), Expect = e-105
Identities = 157/184 (85%), Positives = 173/184 (94%)
Frame = -3 / +3
Query: 887 GSDMGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGS 708
G MG +GDT+ES+RS+QIRQV+MQ ISLGMIVTSALIIWKGL+ TGSESPVVVVLSGS
Sbjct: 21 GEKMGMIGDTIESLRSLQIRQVVMQAISLGMIVTSALIIWKGLMCVTGSESPVVVVLSGS 200
Query: 707 MEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGD 528
MEPGFKRGDILFLHMSK PIR GEIVVF+VDGREIPIVHRVIKVHERQ+T EV++LTKGD
Sbjct: 201 MEPGFKRGDILFLHMSKAPIRAGEIVVFHVDGREIPIVHRVIKVHERQETGEVEVLTKGD 380
Query: 527 NNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVIT 348
NN+GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKP IKY+LIGALGLLVIT
Sbjct: 381 NNYGDDRLLYAQGQLWLQKHHIMGRAVGFLPYVGWVTILMTEKPLIKYILIGALGLLVIT 560
Query: 347 SKD* 336
SK+*
Sbjct: 561 SKE* 572
Score = 290 bits (628), Expect = 1e-077
Identities = 134/183 (73%), Positives = 146/183 (79%)
Frame = +1 / -1
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSP 519
SFDV+TSKP+API YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP
Sbjct: 568 SFDVITSKPNAPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP 389
Query: 520 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRISPLLNP 699
LLSPLVR STS VS RS T ITR TIGISRPST KTTISP R+G+LLIC+N ISPLLNP
Sbjct: 388 *LLSPLVRTSTSPVSCRSCTFITR*TIGISRPST*KTTISPARMGALLICRNNISPLLNP 209
Query: 700 GSMLPESTTTTGDSLPVKTIKPFHMINAEVTIIPRLMICMSTWRICMERIDSIVSPTNPI 879
GSMLPESTTTTGDSLPV I PFH+I A+VTIIPRLM CM+T I +R DSIVSP PI
Sbjct: 208 GSMLPESTTTTGDSLPVTHISPFHIIKADVTIIPRLMACMTTCLIWSDRRDSIVSPIIPI 29
Query: 880 SLP 888
P
Sbjct: 28 FSP 20
Score = 183 bits (395), Expect = 1e-045
Identities = 80/186 (43%), Positives = 116/186 (62%)
Frame = +3 / -3
Query: 333 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI**SV 512
SL FRRY QQ QC+ Q VL+ H NC+P NIW + +H ++LL P L + I +
Sbjct: 575 SLFFRRYYQQTQCSYQNVLD*GLFGHKNCHPTNIW*KPNSAAHYMMLL*P*LTLSIQKPI 396
Query: 513 IPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITPF 692
I I++ F +D + S L+FM L ++++ N +TI++++N FS N F HMQKQ ITPF
Sbjct: 395 ISIIVIPFSKDFNLPSFLSFMYLYNTMNYRNFSTINMKDNNFSSTNGCFTHMQKQYITPF 216
Query: 693 KSRLHATREHHYNW*LAPRENYQTLPYD*CRGNNHTEADDLHEHLADLHGADRLHRVSDE 872
KSR HAT +H+YNW* + +Q+ PY +NH+EAD LH+HL++L + R++
Sbjct: 215 KSRFHAT*KHNYNW*FTSCDTHQSFPYYQS*RDNHSEADGLHDHLSNLERPEGFDRITYH 36
Query: 873 PHIAPS 890
PH S
Sbjct: 35 PHFFTS 18
Score = 133 bits (286), Expect = 1e-030
Identities = 69/175 (39%), Positives = 96/175 (54%)
Frame = -2 / +2
Query: 861 HDGVDPLHADPPSAHADHQPRYDCYLCINHMEGFDSFHGERVTSCSGALG*HGAWI*KG* 682
+D + P+ D HA HQPR DC++ ++ME D H + +TSCS A *HG WI*KG*
Sbjct: 47 YDRIPPVAPD*TGGHAGHQPRNDCHVSFDNMERTDVCHRK*ITSCSCAFR*HGTWI*KG* 226
Query: 681 YPVFAYEQRSYSHRRNSCFQCRWS*DSNCPPSD*GP*TSGHCRSGHPHQR*Q*FWG*PTI 502
Y V AYE ++S RN C C WS +S G *T+ + P+ R W *
Sbjct: 227 YIVSAYE*STHSCWRNCCLSC*WSRNSYSSSCYKGT*TTRNWGG*SPY*RG*QLWR**AF 406
Query: 501 ICTWPALAPATPHYGTCGGLPSICWLGYNYHD*ETIY*VPADWRTGLAGHNVERL 337
+C+ A+A + G + +ICWLG N +D + + V +D G AG+NVER+
Sbjct: 407 VCSRSAMATEASYNGPRCWVFTICWLGDNSYDRKALNQVHSDRSIGFAGNNVERI 571
>gb|DN463765.1|DN463765 EST959564 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJ295 5' end, mRNA sequence
Length = 804
Score = 380 bits (824), Expect = e-105
Identities = 157/184 (85%), Positives = 173/184 (94%)
Frame = -3 / +2
Query: 887 GSDMGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGS 708
G MG +GDT+ES+RS+QIRQV+MQ ISLGMIVTSALIIWKGL+ TGSESPVVVVLSGS
Sbjct: 29 GEKMGMIGDTIESLRSLQIRQVVMQAISLGMIVTSALIIWKGLMCVTGSESPVVVVLSGS 208
Query: 707 MEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGD 528
MEPGFKRGDILFLHMSK PIR GEIVVF+VDGREIPIVHRVIKVHERQ+T EV++LTKGD
Sbjct: 209 MEPGFKRGDILFLHMSKAPIRAGEIVVFHVDGREIPIVHRVIKVHERQETGEVEVLTKGD 388
Query: 527 NNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVIT 348
NN+GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKP IKY+LIGALGLLVIT
Sbjct: 389 NNYGDDRLLYAQGQLWLQKHHIMGRAVGFLPYVGWVTILMTEKPLIKYILIGALGLLVIT 568
Query: 347 SKD* 336
SK+*
Sbjct: 569 SKE* 580
Score = 290 bits (628), Expect = 1e-077
Identities = 134/183 (73%), Positives = 146/183 (79%)
Frame = +1 / -1
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSP 519
SFDV+TSKP+API YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP
Sbjct: 576 SFDVITSKPNAPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP 397
Query: 520 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRISPLLNP 699
LLSPLVR STS VS RS T ITR TIGISRPST KTTISP R+G+LLIC+N ISPLLNP
Sbjct: 396 *LLSPLVRTSTSPVSCRSCTFITR*TIGISRPST*KTTISPARMGALLICRNNISPLLNP 217
Query: 700 GSMLPESTTTTGDSLPVKTIKPFHMINAEVTIIPRLMICMSTWRICMERIDSIVSPTNPI 879
GSMLPESTTTTGDSLPV I PFH+I A+VTIIPRLM CM+T I +R DSIVSP PI
Sbjct: 216 GSMLPESTTTTGDSLPVTHISPFHIIKADVTIIPRLMACMTTCLIWSDRRDSIVSPIIPI 37
Query: 880 SLP 888
P
Sbjct: 36 FSP 28
Score = 185 bits (399), Expect = 4e-046
Identities = 81/186 (43%), Positives = 117/186 (62%)
Frame = +3 / -3
Query: 333 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI**SV 512
SL FRRY QQ QC+ Q VL+ SH NC+P NIW + +H ++LL P L + I +
Sbjct: 583 SLFFRRYYQQTQCSYQNVLD*GLFSHKNCHPTNIW*KPNSAAHYMMLL*P*LTLSIQKPI 404
Query: 513 IPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITPF 692
I I++ F +D + S L+FM L ++++ N +TI++++N FS N F HMQKQ ITPF
Sbjct: 403 ISIIVIPFSKDFNLPSFLSFMYLYNTMNYRNFSTINMKDNNFSSTNGCFTHMQKQYITPF 224
Query: 693 KSRLHATREHHYNW*LAPRENYQTLPYD*CRGNNHTEADDLHEHLADLHGADRLHRVSDE 872
KSR HAT +H+YNW* + +Q+ PY +NH+EAD LH+HL++L + R++
Sbjct: 223 KSRFHAT*KHNYNW*FTSCDTHQSFPYYQS*RDNHSEADGLHDHLSNLERPEGFDRITYH 44
Query: 873 PHIAPS 890
PH S
Sbjct: 43 PHFFTS 26
Score = 136 bits (291), Expect = 3e-031
Identities = 70/175 (40%), Positives = 97/175 (55%)
Frame = -2 / +1
Query: 861 HDGVDPLHADPPSAHADHQPRYDCYLCINHMEGFDSFHGERVTSCSGALG*HGAWI*KG* 682
+D + P+ D HA HQPR DC++ ++ME D H + +TSCS A *HG WI*KG*
Sbjct: 55 YDRIPPVAPD*TGGHAGHQPRNDCHVSFDNMERTDVCHRK*ITSCSCAFR*HGTWI*KG* 234
Query: 681 YPVFAYEQRSYSHRRNSCFQCRWS*DSNCPPSD*GP*TSGHCRSGHPHQR*Q*FWG*PTI 502
Y V AYE ++S RN C C WS +S G *T+ + P+ R W *
Sbjct: 235 YIVSAYE*STHSCWRNCCLSC*WSRNSYSSSCYKGT*TTRNWGG*SPY*RG*QLWR**AF 414
Query: 501 ICTWPALAPATPHYGTCGGLPSICWLGYNYHD*ETIY*VPADWRTGLAGHNVERL 337
+C+ A+A + G + +ICWLG N +D*+ + V +D G AG+NVER+
Sbjct: 415 VCSRSAMATEASYNGPRCWVFTICWLGDNSYD*KALNQVHSDRSIGFAGNNVERI 579
Score = 68.4 bits (143), Expect(2) = 5e-021
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -1 / +3
Query: 772 YGRV**FSRGASHQL*WCSRVAWSLDLKGVISCFCI*AKILFAQEK*LFSMSMVVRF 602
YG+ * S+ +HQL* C +VAW+LDLKGVI CFCI* K F EK L M MV +F
Sbjct: 144 YGKD*CVSQEVNHQL*LCFQVAWNLDLKGVIYCFCI*VKHPFVLEKLLSFMLMVEKF 314
Score = 53.3 bits (110), Expect(2) = 5e-021
Identities = 31/83 (37%), Positives = 40/83 (48%)
Frame = -1 / +3
Query: 580 RSMNVRTLQKWTSSPKVTIILGMTDYYMHMASFGSSNTTLWDVRWATFHMLAGLQLS*LR 401
R MN + L + S K I+ M + M S+G + W +HML G Q *L+
Sbjct: 336 RYMNDKKLGRLKSLLKGITIMEMIGFCMLKVSYGYRSII*WAALLGFYHMLVG*QFL*LK 515
Query: 400 NHLLSTC*LAHWACWS*RRKISD 332
+ ST * HW CW *RRK D
Sbjct: 516 SP*SSTF**EHWVCW**RRKNRD 584
>gb|CF473592.1|CF473592 RTWW2_3_A05.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_3_A05_A021 5', mRNA sequence
Length = 735
Score = 378 bits (820), Expect = e-104
Identities = 156/184 (84%), Positives = 172/184 (93%)
Frame = -3 / +2
Query: 887 GSDMGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGS 708
G MG +GDT+ES+RS+QIRQV+MQ ISLGMIVTSALIIWKGL+ TGSESPVVVVLSGS
Sbjct: 20 GDKMGMIGDTIESLRSLQIRQVVMQAISLGMIVTSALIIWKGLMCVTGSESPVVVVLSGS 199
Query: 707 MEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGD 528
MEPGFKRGDILFLHMSK PIR GEIVVF+VDGREIPIVHRVIKVHERQ+T EV++LTKGD
Sbjct: 200 MEPGFKRGDILFLHMSKAPIRAGEIVVFHVDGREIPIVHRVIKVHERQETGEVEVLTKGD 379
Query: 527 NNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVIT 348
NN+GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKP IKY+LIG LGLLVIT
Sbjct: 380 NNYGDDRLLYAQGQLWLQKHHIMGRAVGFLPYVGWVTILMTEKPLIKYILIGVLGLLVIT 559
Query: 347 SKD* 336
SK+*
Sbjct: 560 SKE* 571
Score = 288 bits (624), Expect = 4e-077
Identities = 133/183 (72%), Positives = 145/183 (79%)
Frame = +1 / -1
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSP 519
SFDV+TSKP+ PI YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP
Sbjct: 567 SFDVITSKPNTPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP 388
Query: 520 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRISPLLNP 699
LLSPLVR STS VS RS T ITR TIGISRPST KTTISP R+G+LLIC+N ISPLLNP
Sbjct: 387 *LLSPLVRTSTSPVSCRSCTFITR*TIGISRPST*KTTISPARMGALLICRNNISPLLNP 208
Query: 700 GSMLPESTTTTGDSLPVKTIKPFHMINAEVTIIPRLMICMSTWRICMERIDSIVSPTNPI 879
GSMLPESTTTTGDSLPV I PFH+I A+VTIIPRLM CM+T I +R DSIVSP PI
Sbjct: 207 GSMLPESTTTTGDSLPVTHISPFHIIKADVTIIPRLMACMTTCLIWSDRRDSIVSPIIPI 28
Query: 880 SLP 888
P
Sbjct: 27 LSP 19
Score = 177 bits (382), Expect = 8e-044
Identities = 78/186 (41%), Positives = 114/186 (61%)
Frame = +3 / -3
Query: 333 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI**SV 512
SL FRRY QQ Q + Q VL+ H NC+P NIW + +H ++LL P L + I +
Sbjct: 574 SLFFRRYYQQTQYSYQNVLD*GLFGHKNCHPTNIW*KPNSAAHYMMLL*P*LTLSIQKPI 395
Query: 513 IPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITPF 692
I I++ F +D + S L+FM L ++++ N +TI++++N FS N F HMQKQ ITPF
Sbjct: 394 ISIIVIPFSKDFNLASFLSFMYLYNTMNYRNFSTINMKDNNFSSTNGCFTHMQKQYITPF 215
Query: 693 KSRLHATREHHYNW*LAPRENYQTLPYD*CRGNNHTEADDLHEHLADLHGADRLHRVSDE 872
KSR HAT +H+YNW* +Q+ PY +NH++AD LH+HL++L + R++
Sbjct: 214 KSRFHAT*KHNYNW*FTSCNTHQSFPYYQS*RDNHSKADGLHDHLSNLERPEGFDRITYH 35
Query: 873 PHIAPS 890
PH S
Sbjct: 34 PHFITS 17
Score = 130 bits (279), Expect = 1e-029
Identities = 68/175 (38%), Positives = 96/175 (54%)
Frame = -2 / +1
Query: 861 HDGVDPLHADPPSAHADHQPRYDCYLCINHMEGFDSFHGERVTSCSGALG*HGAWI*KG* 682
+D + P+ D HA HQP DC++ ++ME D + + +TSCS A *HG WI*KG*
Sbjct: 46 YDRIPPVAPD*TGGHAGHQPWNDCHVSFDNMERTDVCYRK*ITSCSCAFR*HGTWI*KG* 225
Query: 681 YPVFAYEQRSYSHRRNSCFQCRWS*DSNCPPSD*GP*TSGHCRSGHPHQR*Q*FWG*PTI 502
Y V AYE ++S RN C C WS +S G *T+ + R P+ R W *
Sbjct: 226 YIVSAYE*STHSCWRNCCLSC*WSRNSYSSSCYKGT*TTRNWRG*SPY*RG*QLWR**AF 405
Query: 501 ICTWPALAPATPHYGTCGGLPSICWLGYNYHD*ETIY*VPADWRTGLAGHNVERL 337
+C+ A+A + G + +ICWLG N +D + + V +D G AG+NVER+
Sbjct: 406 VCSRSAMATEASYNGPRCWVFTICWLGDNSYDRKALNQVHSDRSIGFAGNNVERI 570
>gb|BX680840.1|BX680840 BX680840 RS Pinus pinaster cDNA clone RS49D1, mRNA sequence
Length = 567
Score = 366 bits (793), Expect = e-100
Identities = 150/185 (81%), Positives = 167/185 (90%)
Frame = -3 / +1
Query: 917 VISPPESRGRGSDMGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSE 738
++ E G MG +GDT+ES+RS+QIRQV+MQ ISLGMIVTSALIIWKGL+ TGSE
Sbjct: 13 IVERGEQSRGGEKMGMIGDTIESLRSLQIRQVVMQAISLGMIVTSALIIWKGLMCVTGSE 192
Query: 737 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDT 558
SPVVVVLSGSMEPGFKRGDILFLHMSK PIR GEIVVF+VDGREIPIVHRVIKVHERQ+T
Sbjct: 193 SPVVVVLSGSMEPGFKRGDILFLHMSKAPIRAGEIVVFHVDGREIPIVHRVIKVHERQET 372
Query: 557 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLL 378
EV++LTKGDNN+GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKP IKY+L
Sbjct: 373 GEVEVLTKGDNNYGDDRLLYAQGQLWLQKHHIMGRAVGFLPYVGWVTILMTEKPLIKYIL 552
Query: 377 IGALG 363
IGALG
Sbjct: 553 IGALG 567
Score = 275 bits (595), Expect = 4e-073
Identities = 127/175 (72%), Positives = 138/175 (78%)
Frame = +1 / -2
Query: 364 PSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSPKLLSPLVR 543
P+API YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP LLSPLVR
Sbjct: 566 PNAPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP*LLSPLVR 387
Query: 544 MSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRISPLLNPGSMLPEST 723
STS VS RS T ITR TIGISRPST KTTISP R+G+LLIC+N ISPLLNPGSMLPEST
Sbjct: 386 TSTSPVSCRSCTFITR*TIGISRPSTWKTTISPARMGALLICRNNISPLLNPGSMLPEST 207
Query: 724 TTTGDSLPVKTIKPFHMINAEVTIIPRLMICMSTWRICMERIDSIVSPTNPISLP 888
TTTGDSLPV I PFH+I A+VTIIPRLM CM+T I +R DSIVSP PI P
Sbjct: 206 TTTGDSLPVTHISPFHIIKADVTIIPRLMACMTTCLIWRDRRDSIVSPIIPIFSP 42
Score = 171 bits (369), Expect = 5e-042
Identities = 74/175 (42%), Positives = 109/175 (62%)
Frame = +3 / -1
Query: 366 QCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI**SVIPKIIVTFGED 545
QC+ Q VL+ H NC+PANIW + +H ++LL P L + I +I I++ F +D
Sbjct: 564 QCSYQNVLD*GLFGHKNCHPANIW*KPNSAAHYMMLL*P*LTLSIQKPIISIIVIPFSKD 385
Query: 546 VHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITPFKSRLHATREHH 725
+ S L+FM L ++++ N +TI++E+N FS N F HMQKQ I PFKSR HAT +H+
Sbjct: 384 FNLTSFLSFMYLYNTMNYRNFSTINMEDNNFSSTNGCFTHMQKQYIAPFKSRFHAT*KHN 205
Query: 726 YNW*LAPRENYQTLPYD*CRGNNHTEADDLHEHLADLHGADRLHRVSDEPHIAPS 890
YNW* + +Q+ PY +NH+EAD LH+HL++L G + R++ PH S
Sbjct: 204 YNW*FTSCDTHQSFPYYQS*CDNHSEADGLHDHLSNLEGPEGFDRITYHPHFFTS 40
Score = 115 bits (246), Expect = 5e-025
Identities = 62/166 (37%), Positives = 87/166 (52%)
Frame = -2 / +3
Query: 861 HDGVDPLHADPPSAHADHQPRYDCYLCINHMEGFDSFHGERVTSCSGALG*HGAWI*KG* 682
+D + P+ D HA HQPR DC++ ++ME D H + +TSCS A *HG WI*KG
Sbjct: 69 YDRIPPVPPD*TGGHAGHQPRNDCHISFDNMERTDVCHRK*ITSCSCAFR*HGTWI*KGR 248
Query: 681 YPVFAYEQRSYSHRRNSCFQCRWS*DSNCPPSD*GP*TSGHCRSGHPHQR*Q*FWG*PTI 502
Y V AYE ++S RN C C WS +S G *T+ + P+ R W *
Sbjct: 249 YIVSAYE*STHSCWRNCCLPC*WSRNSYSSSCYKGT*TTRNW*G*SPY*RG*QLWR**AF 428
Query: 501 ICTWPALAPATPHYGTCGGLPSICWLGYNYHD*ETIY*VPADWRTG 364
+C+ A+A + G + +ICWLG N +D + + V +D G
Sbjct: 429 VCSRSAMATEASYNGPRCWVFTICWLGDNSYDRKALNQVHSDRSIG 566
>gb|DT627323.1|DT627323 EST1160399 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAX38 5' end, mRNA sequence
Length = 692
Score = 347 bits (751), Expect = 1e-094
Identities = 144/164 (87%), Positives = 156/164 (95%)
Frame = -3 / +2
Query: 827 QVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDILFLHMSKDPI 648
QV+MQ ISLGMIVTSALIIWKGL+ TGSESPVVVVLSGSMEPGFKRGDILFLHMSK PI
Sbjct: 2 QVVMQAISLGMIVTSALIIWKGLMCVTGSESPVVVVLSGSMEPGFKRGDILFLHMSKAPI 181
Query: 647 RTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLWLQQH 468
R GEIVVF+VDGREIPIVHRVIKVHERQ+T EV++LTKGDNN+GDDRLLYA GQLWLQ+H
Sbjct: 182 RAGEIVVFHVDGREIPIVHRVIKVHERQETGEVEVLTKGDNNYGDDRLLYAQGQLWLQKH 361
Query: 467 HIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD* 336
HIMGRAVG+LPYVGWVTI+MTEKP IKY+LIGALGLLVITSK+*
Sbjct: 362 HIMGRAVGFLPYVGWVTILMTEKPLIKYILIGALGLLVITSKE* 493
Score = 272 bits (588), Expect = 3e-072
Identities = 123/162 (75%), Positives = 134/162 (82%)
Frame = +1 / -3
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSP 519
SFDV+TSKP+API YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP
Sbjct: 489 SFDVITSKPNAPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP 310
Query: 520 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRISPLLNP 699
LLSPLVR STS VS RS T ITR TIGISRPST KTTISP R+G+LLIC+N ISPLLNP
Sbjct: 309 *LLSPLVRTSTSPVSCRSCTFITR*TIGISRPST*KTTISPARMGALLICRNNISPLLNP 130
Query: 700 GSMLPESTTTTGDSLPVKTIKPFHMINAEVTIIPRLMICMST 825
GSMLPESTTTTGDSLPV I PFH+I A+VTIIPRLM CM+T
Sbjct: 129 GSMLPESTTTTGDSLPVTHISPFHIIKADVTIIPRLMACMTT 4
Score = 174 bits (375), Expect = 8e-043
Identities = 76/165 (46%), Positives = 107/165 (64%)
Frame = +3 / -2
Query: 333 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI**SV 512
SL FRRY QQ QC+ Q VL+ SH NC+P NIW + +H ++LL P L + I +
Sbjct: 496 SLFFRRYYQQTQCSYQNVLD*GLFSHKNCHPTNIW*KPNSAAHYMMLL*P*LTLSIQKPI 317
Query: 513 IPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITPF 692
I I++ F +D + S L+FM L ++++ N +TI++++N FS N F HMQKQ ITPF
Sbjct: 316 ISIIVIPFSKDFNLPSFLSFMYLYNTMNYRNFSTINMKDNNFSSTNGCFTHMQKQYITPF 137
Query: 693 KSRLHATREHHYNW*LAPRENYQTLPYD*CRGNNHTEADDLHEHL 827
KSR HAT +H+YNW* + +Q+ PY +NH+EAD LH+HL
Sbjct: 136 KSRFHAT*KHNYNW*FTSCDTHQSFPYYQS*RDNHSEADGLHDHL 2
Score = 129 bits (277), Expect = 3e-029
Identities = 67/161 (41%), Positives = 91/161 (56%)
Frame = -2 / +1
Query: 819 HADHQPRYDCYLCINHMEGFDSFHGERVTSCSGALG*HGAWI*KG*YPVFAYEQRSYSHR 640
HA HQPR DC++ ++ME D H + +TSCS A *HG WI*KG*Y V AYE ++S
Sbjct: 10 HAGHQPRNDCHVSFDNMERTDVCHRK*ITSCSCAFR*HGTWI*KG*YIVSAYE*STHSCW 189
Query: 639 RNSCFQCRWS*DSNCPPSD*GP*TSGHCRSGHPHQR*Q*FWG*PTIICTWPALAPATPHY 460
RN C C WS +S G *T+ + P+ R W * +C+ A+A +
Sbjct: 190 RNCCLSC*WSRNSYSSSCYKGT*TTRNWGG*SPY*RG*QLWR**AFVCSRSAMATEASYN 369
Query: 459 GTCGGLPSICWLGYNYHD*ETIY*VPADWRTGLAGHNVERL 337
G + +ICWLG N +D*+ + V +D G AG+NVER+
Sbjct: 370 GPRCWVFTICWLGDNSYD*KALNQVHSDRSIGFAGNNVERI 492
Score = 68.4 bits (143), Expect(2) = 5e-021
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -1 / +3
Query: 772 YGRV**FSRGASHQL*WCSRVAWSLDLKGVISCFCI*AKILFAQEK*LFSMSMVVRF 602
YG+ * S+ +HQL* C +VAW+LDLKGVI CFCI* K F EK L M MV +F
Sbjct: 57 YGKD*CVSQEVNHQL*LCFQVAWNLDLKGVIYCFCI*VKHPFVLEKLLSFMLMVEKF 227
Score = 53.3 bits (110), Expect(2) = 5e-021
Identities = 31/83 (37%), Positives = 40/83 (48%)
Frame = -1 / +3
Query: 580 RSMNVRTLQKWTSSPKVTIILGMTDYYMHMASFGSSNTTLWDVRWATFHMLAGLQLS*LR 401
R MN + L + S K I+ M + M S+G + W +HML G Q *L+
Sbjct: 249 RYMNDKKLGRLKSLLKGITIMEMIGFCMLKVSYGYRSII*WAALLGFYHMLVG*QFL*LK 428
Query: 400 NHLLSTC*LAHWACWS*RRKISD 332
+ ST * HW CW *RRK D
Sbjct: 429 SP*SSTF**EHWVCW**RRKNRD 497
>gb|DR681750.1|DR681750 EST1071825 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA101 3' end, mRNA sequence
Length = 549
Score = 344 bits (746), Expect = 5e-094
Identities = 141/176 (80%), Positives = 157/176 (89%)
Frame = -3 / +2
Query: 917 VISPPESRGRGSDMGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSE 738
++ E G MG +GDT+ES+RS+QIRQV+MQ ISLGMIVTSALIIWKGL+ TGSE
Sbjct: 20 IVERGEQSRGGEKMGMIGDTIESLRSLQIRQVVMQAISLGMIVTSALIIWKGLMCVTGSE 199
Query: 737 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDT 558
SPVVVVLSGSMEPGFKRGDILFLHMSK PIR GEIVVF+VDGREIPIVHRVIKVHERQ+T
Sbjct: 200 SPVVVVLSGSMEPGFKRGDILFLHMSKAPIRAGEIVVFHVDGREIPIVHRVIKVHERQET 379
Query: 557 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFI 390
EV++LTKGDNN+GDDRLLYA GQLWL +HHIMGRAVG+LPYVGWVTI+MTEKP I
Sbjct: 380 GEVEVLTKGDNNYGDDRLLYAQGQLWLHKHHIMGRAVGFLPYVGWVTILMTEKPLI 547
Score = 262 bits (566), Expect = 4e-069
Identities = 122/167 (73%), Positives = 132/167 (79%)
Frame = +1 / -1
Query: 388 LINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSPKLLSPLVRMSTSAVS* 567
LI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP LLSPLVR STS VS
Sbjct: 549 LIKGFSVIRIVTQPTYGKNPTARPII*CLCSHS*P*AYKSLSSP*LLSPLVRTSTSPVSC 370
Query: 568 RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRISPLLNPGSMLPESTTTTGDSLP 747
RS T ITR TIGISRPST KTTISP R+G+LLIC+N ISPLLNPGSMLPESTTTTGDSLP
Sbjct: 369 RSCTFITR*TIGISRPST*KTTISPARMGALLICRNNISPLLNPGSMLPESTTTTGDSLP 190
Query: 748 VKTIKPFHMINAEVTIIPRLMICMSTWRICMERIDSIVSPTNPISLP 888
V I PFH+I A+VTIIPRLM CM+T I +R DSIVSP PI P
Sbjct: 189 VTHISPFHIIKADVTIIPRLMACMTTCLIWSDRRDSIVSPIIPIFSP 49
Score = 157 bits (338), Expect = 1e-037
Identities = 67/162 (41%), Positives = 102/162 (62%)
Frame = +3 / -3
Query: 405 SHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI**SVIPKIIVTFGEDVHFCSVLTFMDLN 584
SH NC+P NIW + +H ++L+ P L + I +I I++ F +D + S L+FM L
Sbjct: 532 SHKNCHPTNIW*KPNSAAHYMMLM*P*LTLSIQKPIISIIVIPFSKDFNLPSFLSFMYLY 353
Query: 585 HSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITPFKSRLHATREHHYNW*LAPRENYQT 764
++++ N +TI++++N FS N F HMQKQ ITPFKSR HAT +H+YNW* + +Q+
Sbjct: 352 NTMNYRNFSTINMKDNNFSSTNGCFTHMQKQYITPFKSRFHAT*KHNYNW*FTSCDTHQS 173
Query: 765 LPYD*CRGNNHTEADDLHEHLADLHGADRLHRVSDEPHIAPS 890
PY +NH+EAD LH+HL++L + R++ PH S
Sbjct: 172 FPYYQS*RDNHSEADGLHDHLSNLERPEGFDRITYHPHFFTS 47
Score = 117 bits (251), Expect = 1e-025
Identities = 61/156 (39%), Positives = 85/156 (54%)
Frame = -2 / +1
Query: 861 HDGVDPLHADPPSAHADHQPRYDCYLCINHMEGFDSFHGERVTSCSGALG*HGAWI*KG* 682
+D + P+ D HA HQPR DC++ ++ME D H + +TSCS A *HG WI*KG*
Sbjct: 76 YDRIPPVAPD*TGGHAGHQPRNDCHVSFDNMERTDVCHRK*ITSCSCAFR*HGTWI*KG* 255
Query: 681 YPVFAYEQRSYSHRRNSCFQCRWS*DSNCPPSD*GP*TSGHCRSGHPHQR*Q*FWG*PTI 502
Y V AYE ++S RN C C WS +S G *T+ + P+ R W *
Sbjct: 256 YIVSAYE*STHSCWRNCCLSC*WSRNSYSSSCYKGT*TTRNWGG*SPY*RG*QLWR**AF 435
Query: 501 ICTWPALAPATPHYGTCGGLPSICWLGYNYHD*ETI 394
+C+ A+A + G + +ICWLG N +D*+ +
Sbjct: 436 VCSRSAMAT*ASYNGPRCWVFTICWLGDNSYD*KAL 543
>gb|BX254088.1|BX254088 BX254088 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP093B08, mRNA sequence
Length = 674
Score = 338 bits (732), Expect = 4e-092
Identities = 140/158 (88%), Positives = 151/158 (95%)
Frame = -3 / +1
Query: 809 ISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIV 630
ISLGMIVTSALIIWKGL+ TGSESPVVVVLSGSMEPGFKRGDILFLHMSK PIR GEIV
Sbjct: 4 ISLGMIVTSALIIWKGLMCVTGSESPVVVVLSGSMEPGFKRGDILFLHMSKAPIRAGEIV 183
Query: 629 VFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRA 450
VF+VDGREIPIVHRVIKVHERQ+T EV++LTKGDNN+GDDRLLYA GQLWLQ+HHIMGRA
Sbjct: 184 VFHVDGREIPIVHRVIKVHERQETGEVEVLTKGDNNYGDDRLLYAQGQLWLQKHHIMGRA 363
Query: 449 VGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD* 336
VG+LPYVGWVTI+MTEKP IKY+LIGALGLLVITSK+*
Sbjct: 364 VGFLPYVGWVTILMTEKPLIKYILIGALGLLVITSKE* 477
Score = 264 bits (571), Expect = 7e-070
Identities = 120/157 (76%), Positives = 130/157 (82%)
Frame = +1 / -1
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSP 519
SFDV+TSKP+API YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP
Sbjct: 473 SFDVITSKPNAPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP 294
Query: 520 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRISPLLNP 699
LLSPLVR STS VS RS T ITR TIGISRPST KTTISP R+G+LLIC+N ISPLLNP
Sbjct: 293 *LLSPLVRTSTSPVSCRSCTFITR*TIGISRPSTWKTTISPARMGALLICRNNISPLLNP 114
Query: 700 GSMLPESTTTTGDSLPVKTIKPFHMINAEVTIIPRLM 810
GSMLPESTTTTGDSLPV I PFH+I A+VTIIPRLM
Sbjct: 113 GSMLPESTTTTGDSLPVTHISPFHIIKADVTIIPRLM 3
Score = 163 bits (351), Expect = 2e-039
Identities = 72/159 (45%), Positives = 101/159 (63%)
Frame = +3 / -3
Query: 333 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI**SV 512
SL FRRY QQ QC+ Q VL+ H NC+PANIW + +H ++LL P L + I +
Sbjct: 480 SLFFRRYYQQTQCSYQNVLD*GLFGHKNCHPANIW*KPNSAAHYMMLL*P*LTLSIQKPI 301
Query: 513 IPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITPF 692
I I++ F +D + S L+FM L ++++ N +TI++E+N FS N F HMQKQ I PF
Sbjct: 300 ISIIVIPFSKDFNLTSFLSFMYLYNTMNYRNFSTINMEDNNFSSTNGCFTHMQKQYIAPF 121
Query: 693 KSRLHATREHHYNW*LAPRENYQTLPYD*CRGNNHTEAD 809
KSR HAT +H+YNW* + +Q+ PY +NH+EAD
Sbjct: 120 KSRFHAT*KHNYNW*FTSCDTHQSFPYYQS*RDNHSEAD 4
Score = 118 bits (253), Expect = 5e-026
Identities = 63/158 (39%), Positives = 87/158 (55%)
Frame = -2 / +3
Query: 810 HQPRYDCYLCINHMEGFDSFHGERVTSCSGALG*HGAWI*KG*YPVFAYEQRSYSHRRNS 631
HQPR DC++ ++ME D H + +TSCS A *HG WI*KG Y V AYE ++S RN
Sbjct: 3 HQPRNDCHVSFDNMERTDVCHRK*ITSCSCAFR*HGTWI*KGRYIVSAYE*STHSCWRNC 182
Query: 630 CFQCRWS*DSNCPPSD*GP*TSGHCRSGHPHQR*Q*FWG*PTIICTWPALAPATPHYGTC 451
C C WS +S G *T+ + P+ R W * +C+ A+A + G
Sbjct: 183 CLPC*WSRNSYSSSCYKGT*TTRNW*G*SPY*RG*QLWR**AFVCSRSAMATEASYNGPR 362
Query: 450 GGLPSICWLGYNYHD*ETIY*VPADWRTGLAGHNVERL 337
+ +ICWLG N +D + + V +D G AG+NVER+
Sbjct: 363 CWVFTICWLGDNSYDRKALNQVHSDRSIGFAGNNVERI 476
Score = 69.3 bits (145), Expect(2) = 6e-021
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -1 / +2
Query: 772 YGRV**FSRGASHQL*WCSRVAWSLDLKGVISCFCI*AKILFAQEK*LFSMSMVVRF 602
YG+ * S+ +HQL* C +VAW+LDLKG I CFCI* K F EK L SM MV +F
Sbjct: 41 YGKD*CVSQEVNHQL*LCFQVAWNLDLKGAIYCFCI*VKHPFVLEKLLSSMLMVEKF 211
Score = 51.9 bits (107), Expect(2) = 6e-021
Identities = 31/83 (37%), Positives = 40/83 (48%)
Frame = -1 / +2
Query: 580 RSMNVRTLQKWTSSPKVTIILGMTDYYMHMASFGSSNTTLWDVRWATFHMLAGLQLS*LR 401
R MN + L + S K I+ M + M S+G + W +HMLAG Q * +
Sbjct: 233 RYMNDKKLVRLKSLLKGITIMEMIGFCMLKVSYGYRSII*WAALLGFYHMLAG*QFL*PK 412
Query: 400 NHLLSTC*LAHWACWS*RRKISD 332
+ ST * HW CW *RRK D
Sbjct: 413 SP*SSTF**EHWVCW**RRKNRD 481
>gb|AW043371.1|AW043371 ST32E12 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST32E12, mRNA sequence
Length = 601
Score = 309 bits (670), Expect = 2e-083
Identities = 128/160 (80%), Positives = 143/160 (89%)
Frame = -3 / +3
Query: 917 VISPPESRGRGSDMGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSE 738
++ E G MG +GDT+ES+RS+QIRQV+MQ ISLGMIVTSALIIWKGL+ TGSE
Sbjct: 21 IVERGEQSRGGEKMGMIGDTIESLRSLQIRQVVMQAISLGMIVTSALIIWKGLMCVTGSE 200
Query: 737 SPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDT 558
SPVVVVLSGSMEPGFKRGDILFLHMSK PIR GEIVVF+VDGREIPIVHRVIKVHERQ+T
Sbjct: 201 SPVVVVLSGSMEPGFKRGDILFLHMSKAPIRAGEIVVFHVDGREIPIVHRVIKVHERQET 380
Query: 557 AEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYL 438
EV++LTKGDNN+GDDRLLYA GQLWLQ+HHIMGRAVG+L
Sbjct: 381 GEVEVLTKGDNNYGDDRLLYAQGQLWLQKHHIMGRAVGFL 500
Score = 231 bits (498), Expect = 8e-060
Identities = 108/148 (72%), Positives = 116/148 (78%)
Frame = +1 / -1
Query: 445 PTARPIMWCCWSQSWPCAYNSRSSPKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTL 624
PTARPI+ C S S P AY S SSP LLSPLVR STS VS RS T ITR TIGISRPST
Sbjct: 493 PTARPII*CFCSHS*P*AYKSLSSP*LLSPLVRTSTSPVSCRSCTFITR*TIGISRPST* 314
Query: 625 KTTISPVRIGSLLICKNRISPLLNPGSMLPESTTTTGDSLPVKTIKPFHMINAEVTIIPR 804
KTTISP R+G+LLIC+N ISPLLNPGSMLPESTTTTGDSLPV I PFH+I A+VTIIPR
Sbjct: 313 KTTISPARMGALLICRNNISPLLNPGSMLPESTTTTGDSLPVTHISPFHIIKADVTIIPR 134
Query: 805 LMICMSTWRICMERIDSIVSPTNPISLP 888
LM CM+T I +R DSIVSP PI P
Sbjct: 133 LMACMTTCLIWSDRRDSIVSPIIPIFSP 50
Score = 136 bits (292), Expect = 2e-031
Identities = 60/145 (41%), Positives = 92/145 (63%)
Frame = +3 / -3
Query: 456 SHNVVLLEPKLAMCI**SVIPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNY 635
+H ++LL P L + I +I I++ F +D + S L+FM L ++++ N +TI++++N
Sbjct: 482 AHYMMLL*P*LTLSIQKPIISIIVIPFSKDFNLPSFLSFMYLYNTMNYRNFSTINMKDNN 303
Query: 636 FSCANRIFAHMQKQDITPFKSRLHATREHHYNW*LAPRENYQTLPYD*CRGNNHTEADDL 815
FS N F HMQKQ ITPFKSR HAT +H+YNW* + +Q+ PY +NH+EAD L
Sbjct: 302 FSSTNGCFTHMQKQYITPFKSRFHAT*KHNYNW*FTSCDTHQSFPYYQS*RDNHSEADGL 123
Query: 816 HEHLADLHGADRLHRVSDEPHIAPS 890
H+HL++L + R++ PH S
Sbjct: 122 HDHLSNLERPEGFDRITYHPHFFTS 48
Score = 102 bits (218), Expect = 4e-021
Identities = 53/135 (39%), Positives = 72/135 (53%)
Frame = -2 / +2
Query: 861 HDGVDPLHADPPSAHADHQPRYDCYLCINHMEGFDSFHGERVTSCSGALG*HGAWI*KG* 682
+D + P+ D HA HQPR DC++ ++ME D H + +TSCS A *HG WI*KG*
Sbjct: 77 YDRIPPVAPD*TGGHAGHQPRNDCHVSFDNMERTDVCHRK*ITSCSCAFR*HGTWI*KG* 256
Query: 681 YPVFAYEQRSYSHRRNSCFQCRWS*DSNCPPSD*GP*TSGHCRSGHPHQR*Q*FWG*PTI 502
Y V AYE ++S RN C C WS +S G *T+ + P+ R W *
Sbjct: 257 YIVSAYE*STHSCWRNCCLSC*WSRNSYSSSCYKGT*TTRNWGG*SPY*RG*QLWR**AF 436
Query: 501 ICTWPALAPATPHYG 457
+C+ A+A + G
Sbjct: 437 VCSRSAMATEASYNG 481
>gb|DR110673.1|DR110673 RTS1_12_F08.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_12_F08_A029 3', mRNA sequence
Length = 835
Score = 302 bits (654), Expect = 3e-081
Identities = 124/142 (87%), Positives = 135/142 (95%)
Frame = -3 / +1
Query: 761 LIVFTGSESPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVI 582
L+ TGSESPVVVVLSGSMEPGFKRGDILFLHMSK PIR GEIVVF+VDGREIPIVHRVI
Sbjct: 1 LMCVTGSESPVVVVLSGSMEPGFKRGDILFLHMSKAPIRAGEIVVFHVDGREIPIVHRVI 180
Query: 581 KVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTE 402
KVHERQ+T EV++LTKGDNN+GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTE
Sbjct: 181 KVHERQETGEVEVLTKGDNNYGDDRLLYAQGQLWLQKHHIMGRAVGFLPYVGWVTILMTE 360
Query: 401 KPFIKYLLIGALGLLVITSKD* 336
KP IKY+LIGALGLLVITSK+*
Sbjct: 361 KPLIKYILIGALGLLVITSKE* 426
Score = 231 bits (499), Expect = 6e-060
Identities = 107/140 (76%), Positives = 115/140 (82%)
Frame = +1 / -3
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSP 519
SFDV+TSKP+API YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP
Sbjct: 422 SFDVITSKPNAPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP 243
Query: 520 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRISPLLNP 699
LLSPLVR STS VS RS T ITR TIGISRPST KTTISP R+G+LLIC+N ISPLLNP
Sbjct: 242 *LLSPLVRTSTSPVSCRSCTFITR*TIGISRPST*KTTISPARMGALLICRNNISPLLNP 63
Query: 700 GSMLPESTTTTGDSLPVKTI 759
GSMLPESTTTTGDSLPV I
Sbjct: 62 GSMLPESTTTTGDSLPVTHI 3
Score = 146 bits (314), Expect = 2e-034
Identities = 64/143 (44%), Positives = 91/143 (63%)
Frame = +3 / -2
Query: 333 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI**SV 512
SL FRRY QQ QC+ Q VL+ H NC+P NIW + +H ++LL P L + I +
Sbjct: 429 SLFFRRYYQQTQCSYQNVLD*GLFGHKNCHPTNIW*KPNSAAHYMMLL*P*LTLSIQKPI 250
Query: 513 IPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITPF 692
I I++ F +D + S L+FM L ++++ N +TI++++N FS N F HMQKQ ITPF
Sbjct: 249 ISIIVIPFSKDFNLPSFLSFMYLYNTMNYRNFSTINMKDNNFSSTNGCFTHMQKQYITPF 70
Query: 693 KSRLHATREHHYNW*LAPRENYQ 761
KSR HAT +H+YNW* + +Q
Sbjct: 69 KSRFHAT*KHNYNW*FTSCDTHQ 1
>gb|DT637807.1|DT637807 EST1152738 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH774 3' end, mRNA sequence
Length = 727
Score = 219 bits (473), Expect(2) = 3e-080
Identities = 89/124 (71%), Positives = 109/124 (87%)
Frame = -3 / +1
Query: 881 DMGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSME 702
+MG +G+ M+SIRS+ +RQV MQ ISLGM+V+S +I+WK L+ TGSESP+VVVLSGSME
Sbjct: 82 EMGAIGNAMDSIRSIHLRQVTMQAISLGMMVSSVMILWKTLMCITGSESPIVVVLSGSME 261
Query: 701 PGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNN 522
PGF+RGDILFLHMSK PIR GEIVVF+V+G++IPIVHRVIKVHER DT E+D+LTKGD+N
Sbjct: 262 PGFQRGDILFLHMSKAPIRAGEIVVFHVEGKDIPIVHRVIKVHERHDTKEIDVLTKGDDN 441
Query: 521 FGDD 510
DD
Sbjct: 442 EVDD 453
Score = 166 bits (357), Expect(2) = 2e-057
Identities = 82/127 (64%), Positives = 91/127 (71%)
Frame = +1 / -3
Query: 505 SRSSPKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRIS 684
S SS L SPLVR S S VS RS TLITR TIGIS PST TTISP RIG+LLIC+N +S
Sbjct: 458 SSSSTSLSSPLVRTSISFVSWRSCTLITR*TIGISLPST*NTTISPARIGALLICRNNMS 279
Query: 685 PLLNPGSMLPESTTTTGDSLPVKTIKPFHMINAEVTIIPRLMICMSTWRICMERIDSIVS 864
PL NPGSMLPESTTT GDSLPV I FH I + TIIPRL+ CM T ++ I+S+
Sbjct: 278 PL*NPGSMLPESTTTIGDSLPVIHINVFHNIMTDETIIPRLIACMVTCLR*IDLIESMAF 99
Query: 865 PTNPISL 885
P PISL
Sbjct: 98 PIAPISL 78
Score = 100 bits (213), Expect(2) = 3e-080
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = -3 / +1
Query: 515 DDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD* 336
D+ +YA Q WLQQ + GR VG+LPY GWVTIIMTE P IKY+LIGALGLLVI SK+*
Sbjct: 454 DEGGIYADDQQWLQQQDVAGRIVGFLPYAGWVTIIMTENPIIKYILIGALGLLVIASKE* 633
Score = 79.4 bits (167), Expect(3) = 1e-029
Identities = 32/87 (36%), Positives = 56/87 (64%)
Frame = +3 / -2
Query: 510 VIPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITP 689
+I I++ F ++++F ++ FM L++S++ N+ +++++N F N F HM KQ +TP
Sbjct: 453 IINLIVIPFSQNINFFCIMAFMYLDNSMNYRNIFALNMKHNNFPRTNWCFTHM*KQYVTP 274
Query: 690 FKSRLHATREHHYNW*LAPRENYQTLP 770
KSRLHA +H+ NW*LA + + P
Sbjct: 273 LKSRLHAP*KHNNNW*LATGDTH*CFP 193
Score = 77.1 bits (162), Expect(2) = 2e-057
Identities = 33/59 (55%), Positives = 40/59 (67%)
Frame = +1 / -3
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSS 516
S D +TSKP+AP+S YL+ GFSVM+IVTQP YG+ PT RP CC + AY SS
Sbjct: 629 SLDAITSKPNAPMSMYLMMGFSVMMIVTQPAYGKNPTMRPATSCCCNHC*SSAYMPPSS 453
Score = 50.1 bits (103), Expect(3) = 1e-029
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +3 / -2
Query: 357 QQAQCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI 500
+Q C+N+ VL+ SHD+ +P +IW + + N++LL+P L +CI
Sbjct: 612 EQT*CSNEYVLDDGVFSHDDSHPTSIW*KPNNATSNILLLQPLLIICI 469
Score = 39.1 bits (79), Expect(3) = 1e-029
Identities = 13/30 (43%), Positives = 24/30 (80%)
Frame = +3 / -2
Query: 789 NNHTEADDLHEHLADLHGADRLHRVSDEPH 878
N+H++A+ LH HL++++ +DR+H VS+ H
Sbjct: 174 NHHSKANCLHGHLSEVNRSDRVHGVSNRTH 85
>gb|DR692633.1|DR692633 EST1082721 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADO48 3' end, mRNA sequence
Length = 678
Score = 219 bits (473), Expect(2) = 3e-080
Identities = 89/124 (71%), Positives = 109/124 (87%)
Frame = -3 / +2
Query: 881 DMGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGSME 702
+MG +G+ M+SIRS+ +RQV MQ ISLGM+V+S +I+WK L+ TGSESP+VVVLSGSME
Sbjct: 74 EMGAIGNAMDSIRSIHLRQVTMQAISLGMMVSSVMILWKTLMCITGSESPIVVVLSGSME 253
Query: 701 PGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNN 522
PGF+RGDILFLHMSK PIR GEIVVF+V+G++IPIVHRVIKVHER DT E+D+LTKGD+N
Sbjct: 254 PGFQRGDILFLHMSKAPIRAGEIVVFHVEGKDIPIVHRVIKVHERHDTKEIDVLTKGDDN 433
Query: 521 FGDD 510
DD
Sbjct: 434 EVDD 445
Score = 166 bits (357), Expect(2) = 2e-057
Identities = 82/127 (64%), Positives = 91/127 (71%)
Frame = +1 / -1
Query: 505 SRSSPKLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKNRIS 684
S SS L SPLVR S S VS RS TLITR TIGIS PST TTISP RIG+LLIC+N +S
Sbjct: 450 SSSSTSLSSPLVRTSISFVSWRSCTLITR*TIGISLPST*NTTISPARIGALLICRNNMS 271
Query: 685 PLLNPGSMLPESTTTTGDSLPVKTIKPFHMINAEVTIIPRLMICMSTWRICMERIDSIVS 864
PL NPGSMLPESTTT GDSLPV I FH I + TIIPRL+ CM T ++ I+S+
Sbjct: 270 PL*NPGSMLPESTTTIGDSLPVIHINVFHNIMTDETIIPRLIACMVTCLR*IDLIESMAF 91
Query: 865 PTNPISL 885
P PISL
Sbjct: 90 PIAPISL 70
Score = 100 bits (213), Expect(2) = 3e-080
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = -3 / +2
Query: 515 DDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD* 336
D+ +YA Q WLQQ + GR VG+LPY GWVTIIMTE P IKY+LIGALGLLVI SK+*
Sbjct: 446 DEGGIYADDQQWLQQQDVAGRIVGFLPYAGWVTIIMTENPIIKYILIGALGLLVIASKE* 625
Score = 79.4 bits (167), Expect(3) = 1e-029
Identities = 32/87 (36%), Positives = 56/87 (64%)
Frame = +3 / -3
Query: 510 VIPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQDITP 689
+I I++ F ++++F ++ FM L++S++ N+ +++++N F N F HM KQ +TP
Sbjct: 445 IINLIVIPFSQNINFFCIMAFMYLDNSMNYRNIFALNMKHNNFPRTNWCFTHM*KQYVTP 266
Query: 690 FKSRLHATREHHYNW*LAPRENYQTLP 770
KSRLHA +H+ NW*LA + + P
Sbjct: 265 LKSRLHAP*KHNNNW*LATGDTH*CFP 185
Score = 77.1 bits (162), Expect(2) = 2e-057
Identities = 33/59 (55%), Positives = 40/59 (67%)
Frame = +1 / -1
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSS 516
S D +TSKP+AP+S YL+ GFSVM+IVTQP YG+ PT RP CC + AY SS
Sbjct: 621 SLDAITSKPNAPMSMYLMMGFSVMMIVTQPAYGKNPTMRPATSCCCNHC*SSAYMPPSS 445
Score = 50.1 bits (103), Expect(3) = 1e-029
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +3 / -3
Query: 357 QQAQCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI 500
+Q C+N+ VL+ SHD+ +P +IW + + N++LL+P L +CI
Sbjct: 604 EQT*CSNEYVLDDGVFSHDDSHPTSIW*KPNNATSNILLLQPLLIICI 461
Score = 39.1 bits (79), Expect(3) = 1e-029
Identities = 13/30 (43%), Positives = 24/30 (80%)
Frame = +3 / -3
Query: 789 NNHTEADDLHEHLADLHGADRLHRVSDEPH 878
N+H++A+ LH HL++++ +DR+H VS+ H
Sbjct: 166 NHHSKANCLHGHLSEVNRSDRVHGVSNRTH 77
>gb|DR683136.1|DR683136 EST1073212 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAE63, mRNA sequence
Length = 524
Score = 246 bits (531), Expect = 2e-064
Identities = 99/114 (86%), Positives = 109/114 (95%)
Frame = -3 / -2
Query: 677 LFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLY 498
LFLHMSK PIR GEIVVF+VDGREIPIVHRVIKVHERQ+T EV++LTKGDNN+GDDRLLY
Sbjct: 523 LFLHMSKAPIRAGEIVVFHVDGREIPIVHRVIKVHERQETGEVEVLTKGDNNYGDDRLLY 344
Query: 497 AHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD* 336
A GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKP IKY+LIGALGLLVITSK+*
Sbjct: 343 AQGQLWLQKHHIMGRAVGFLPYVGWVTILMTEKPLIKYILIGALGLLVITSKE* 182
Score = 175 bits (376), Expect = 6e-043
Identities = 82/112 (73%), Positives = 90/112 (80%)
Frame = +1 / +3
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSP 519
SFDV+TSKP+API YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP
Sbjct: 186 SFDVITSKPNAPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP 365
Query: 520 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLLICKN 675
LLSPLVR STS VS RS T ITR TIGISRPST KTTISP R+G+LLIC+N
Sbjct: 366 *LLSPLVRTSTSPVSCRSCTFITR*TIGISRPST*KTTISPARMGALLICRN 521
Score = 109 bits (232), Expect = 4e-023
Identities = 49/115 (42%), Positives = 72/115 (62%)
Frame = +3 / +2
Query: 333 SLIFRRYDQQAQCANQQVLNKWFLSHDNCNPANIWKVAHRTSHNVVLLEPKLAMCI**SV 512
SL FRRY QQ QC+ Q VL+ SH NC+P NIW + +H ++LL P L + I +
Sbjct: 179 SLFFRRYYQQTQCSYQNVLD*GLFSHKNCHPTNIW*KPNSAAHYMMLL*P*LTLSIQKPI 358
Query: 513 IPKIIVTFGEDVHFCSVLTFMDLNHSVDNWNLTTIDIENNYFSCANRIFAHMQKQ 677
I I++ F +D + S L+FM L ++++ N +TI++++N FS N F HMQKQ
Sbjct: 359 ISIIVIPFSKDFNLPSFLSFMYLYNTMNYRNFSTINMKDNNFSSTNGCFTHMQKQ 523
>gb|CF389415.1|CF389415 RTDR2_7_A04.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_7_A04_A021 3', mRNA
sequence
Length = 666
Score = 233 bits (504), Expect = 1e-060
Identities = 94/109 (86%), Positives = 104/109 (95%)
Frame = -3 / +2
Query: 662 SKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQL 483
SK PIR GEIVVF+VDGREIPIVHRVIKVHERQ+T EV++LTKGDNN+GDDRLLYA GQL
Sbjct: 2 SKAPIRAGEIVVFHVDGREIPIVHRVIKVHERQETGEVEVLTKGDNNYGDDRLLYAQGQL 181
Query: 482 WLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD* 336
WLQ+HHIMGRAVG+LPYVGWVTI+MTEKP IKY+LIGALGLLVITSK+*
Sbjct: 182 WLQKHHIMGRAVGFLPYVGWVTILMTEKPLIKYILIGALGLLVITSKE* 328
Score = 165 bits (355), Expect = 4e-040
Identities = 79/108 (73%), Positives = 86/108 (79%)
Frame = +1 / -1
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSP 519
SFDV+TSKP+API YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP
Sbjct: 324 SFDVITSKPNAPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP 145
Query: 520 KLLSPLVRMSTSAVS*RSWTLITRWTIGISRPSTLKTTISPVRIGSLL 663
LLSPLVR STS VS RS T ITR TIGISRPST KTTISP R+G+LL
Sbjct: 144 *LLSPLVRTSTSPVSCRSCTFITR*TIGISRPST*KTTISPARMGALL 1
>gb|DR113052.1|DR113052 RTS1_32_D10.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_32_D10_A029 5', mRNA sequence
Length = 309
Score = 200 bits (431), Expect = 1e-050
Identities = 85/100 (85%), Positives = 92/100 (92%)
Frame = -3 / +3
Query: 887 GSDMGFVGDTMESIRSMQIRQVLMQIISLGMIVTSALIIWKGLIVFTGSESPVVVVLSGS 708
G MG +GDT+ES+RS+QIRQV+MQ ISLGMIVTSALIIWKGL+ TGSESPVVVVLSGS
Sbjct: 9 GEKMGMIGDTIESLRSLQIRQVVMQAISLGMIVTSALIIWKGLMCVTGSESPVVVVLSGS 188
Query: 707 MEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHR 588
MEPGFKRGDILFLHMSK PIR GEIVVF+VDGREIPIVHR
Sbjct: 189 MEPGFKRGDILFLHMSKAPIRAGEIVVFHVDGREIPIVHR 308
Score = 170 bits (365), Expect = 2e-041
Identities = 75/100 (75%), Positives = 82/100 (82%)
Frame = +1 / -3
Query: 589 RWTIGISRPSTLKTTISPVRIGSLLICKNRISPLLNPGSMLPESTTTTGDSLPVKTIKPF 768
R TIGISRPST KTTISP R+G+LLIC+N ISPLLNPGSMLPESTTTTGDSLPV I PF
Sbjct: 307 R*TIGISRPST*KTTISPARMGALLICRNNISPLLNPGSMLPESTTTTGDSLPVTHISPF 128
Query: 769 HMINAEVTIIPRLMICMSTWRICMERIDSIVSPTNPISLP 888
H+I A+VTIIPRLM CM+T I +R DSIVSP PI P
Sbjct: 127 HIIKADVTIIPRLMACMTTCLIWSDRRDSIVSPIIPIFSP 8
Score = 111 bits (237), Expect = 8e-024
Identities = 45/96 (46%), Positives = 63/96 (65%)
Frame = +3 / -2
Query: 603 NLTTIDIENNYFSCANRIFAHMQKQDITPFKSRLHATREHHYNW*LAPRENYQTLPYD*C 782
N +TI++++N FS N F HMQKQ ITPFKSR HAT +H+YNW* + +Q+ PY
Sbjct: 293 NFSTINMKDNNFSSTNGCFTHMQKQYITPFKSRFHAT*KHNYNW*FTSCDTHQSFPYYQS 114
Query: 783 RGNNHTEADDLHEHLADLHGADRLHRVSDEPHIAPS 890
+NH+EAD LH+HL++L + R++ PH S
Sbjct: 113 *RDNHSEADGLHDHLSNLERPEGFDRITYHPHFFTS 6
>gb|DR683137.1|DR683137 EST1073213 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAE63 3' end, mRNA sequence
Length = 487
Score = 185 bits (398), Expect = 5e-046
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = -3 / +2
Query: 590 RVIKVHERQDTAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTII 411
RVIKVHERQ+T EV++LTKGDNN+GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+
Sbjct: 2 RVIKVHERQETGEVEVLTKGDNNYGDDRLLYAQGQLWLQKHHIMGRAVGFLPYVGWVTIL 181
Query: 410 MTEKPFIKYLLIGALGLLVITSKD* 336
MTEKP IKY+LIGALGLLVITSK+*
Sbjct: 182 MTEKPLIKYILIGALGLLVITSKE* 256
Score = 125 bits (268), Expect = 4e-028
Identities = 60/84 (71%), Positives = 65/84 (77%)
Frame = +1 / -2
Query: 340 SFDVMTSKPSAPISRYLINGFSVMIIVTQPTYGR*PTARPIMWCCWSQSWPCAYNSRSSP 519
SFDV+TSKP+API YLI GFSV+ IVTQPTYG+ PTARPI+ C S S P AY S SSP
Sbjct: 252 SFDVITSKPNAPIRMYLIKGFSVIRIVTQPTYGKNPTARPII*CFCSHS*P*AYKSLSSP 73
Query: 520 KLLSPLVRMSTSAVS*RSWTLITR 591
LLSPLVR STS VS RS T ITR
Sbjct: 72 *LLSPLVRTSTSPVSCRSCTFITR 1
>gb|AW438035.1|AW438035 ST83G04 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST83G04, mRNA sequence
Length = 418
Score = 148 bits (318), Expect = 6e-035
Identities = 58/66 (87%), Positives = 64/66 (96%)
Frame = -3 / +1
Query: 533 GDNNFGDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLV 354
GDNN+GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKP IKY+LIGALGLLV
Sbjct: 1 GDNNYGDDRLLYAQGQLWLQKHHIMGRAVGFLPYVGWVTILMTEKPLIKYILIGALGLLV 180
Query: 353 ITSKD* 336
ITSK+*
Sbjct: 181 ITSKE* 198
>gb|BI397852.1|BI397852 NXPV_108_E04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_108_E04 5' similar to Arabidopsis
thaliana sequence At3g15710 putative signal peptidase
21kDa subunit see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 437
Score = 102 bits (217), Expect(2) = 9e-033
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -3 / +3
Query: 515 DDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD* 336
D+ +YA Q WLQQ + GR VG+LPYVGWVTIIMTE P IKY+LIGALGLLVI SK+*
Sbjct: 93 DEGGIYADDQQWLQQQDVAGRIVGFLPYVGWVTIIMTENPIIKYILIGALGLLVIASKE* 272
Score = 58.8 bits (122), Expect(2) = 9e-033
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -3 / +3
Query: 599 IVHRVIKVHERQDTAEVDILTKGDNNFGDD 510
IVHRVIKVHER DT E+D+LTKGD+N DD
Sbjct: 3 IVHRVIKVHERHDTKEIDVLTKGDDNEVDD 92
>gb|BM367466.1|BM367466 NXLV_049_F07_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_049_F07 5' similar to Arabidopsis thaliana
sequence At1g52600 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 425
Score = 136 bits (291), Expect = 3e-031
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = -3 / +3
Query: 518 GDDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD 339
GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKP IKY+LIGALGLLVITSK+
Sbjct: 18 GDDRLLYAQGQLWLQKHHIMGRAVGFLPYVGWVTILMTEKPLIKYILIGALGLLVITSKE 197
Query: 338 * 336
*
Sbjct: 198 * 200
>gb|CX649415.1|CX649415 COLD1_35_D06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_35_D06_A029 3', mRNA sequence
Length = 732
Score = 102 bits (217), Expect = 5e-021
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -3 / +2
Query: 515 DDRLLYAHGQLWLQQHHIMGRAVGYLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKD* 336
D+ +YA Q WLQQ + GR VG+LPYVGWVTIIMTE P IKY+LIGALGLLVI SK+*
Sbjct: 17 DEGGIYADDQQWLQQQDVAGRIVGFLPYVGWVTIIMTENPIIKYILIGALGLLVIASKE* 196
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 623,195,665
Number of Sequences: 355925
Number of extensions: 9918378
Number of successful extensions: 56044
Number of sequences better than 1.0e-020: 25
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 15532898800
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)