TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542097.2.1
(887 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF399429.1|CF399429 RTDS3_28_A02.g1_A022 Drought-stresse... 172 3e-042
gb|CF670661.1|CF670661 RTCNT1_51_E10.g1_A029 Root control P... 172 3e-042
gb|CO366778.1|CO366778 RTK1_30_B07.b1_A029 Roots minus pota... 172 3e-042
gb|CO366847.1|CO366847 RTK1_30_B07.g1_A029 Roots minus pota... 172 3e-042
gb|CO366925.1|CO366925 RTK1_31_B08.b1_A029 Roots minus pota... 172 3e-042
gb|CO366996.1|CO366996 RTK1_31_B08.g1_A029 Roots minus pota... 172 3e-042
gb|CX650190.1|CX650190 COLD1_44_C07.b1_A029 Root cold Pinus... 172 3e-042
gb|DR068947.1|DR068947 RTDK1_3_G06.g1_A029 Roots, dark Pinu... 172 3e-042
gb|DR072325.1|DR072325 RTDK1_25_C01.g1_A029 Roots, dark Pin... 172 3e-042
gb|DR081091.1|DR081091 RTFEPL1_27_G05.b1_A029 Roots plus ad... 172 3e-042
gb|DR088529.1|DR088529 RTAL1_2_A12.g1_A029 Roots plus added... 172 3e-042
gb|DR090049.1|DR090049 RTAL1_12_H11.b1_A029 Roots plus adde... 172 3e-042
gb|DR110327.1|DR110327 RTS1_10_F06.b1_A029 Roots minus sulf... 172 3e-042
gb|DR180399.1|DR180399 RTMNUT1_28_H06.b1_A029 Roots minus m... 172 3e-042
gb|AW065179.1|AW065179 ST40F05 Pine TriplEx shoot tip libra... 171 4e-042
gb|CO370161.1|CO370161 RTK1_65_H02.g1_A029 Roots minus pota... 169 3e-041
gb|CF395930.1|CF395930 RTDS2_19_D12.g1_A021 Drought-stresse... 166 2e-040
gb|BG039919.1|BG039919 NXSI_101_E11_F NXSI (Nsf Xylem Side ... 164 1e-039
gb|AI812742.1|AI812742 18E7 Pine Lambda Zap Xylem library P... 163 2e-039
gb|BX253247.1|BX253247 BX253247 Pinus pinaster differenciat... 163 2e-039
gb|BG275400.1|BG275400 NXSI_141_B06_F NXSI (Nsf Xylem Side ... 163 2e-039
gb|CF397061.1|CF397061 RTDS2_26_B02.b1_A021 Drought-stresse... 163 2e-039
gb|CF397158.1|CF397158 RTDS2_26_B02.g1_A021 Drought-stresse... 163 2e-039
gb|CF475821.1|CF475821 RTWW2_15_C05.g1_A021 Well-watered lo... 163 2e-039
gb|CO199257.1|CO199257 GEO1_19_H07.g1_A029 Root gravitropis... 163 2e-039
gb|CO370138.1|CO370138 RTK1_65_F02.g1_A029 Roots minus pota... 163 2e-039
gb|CV031601.1|CV031601 RTNACL1_2_C05.g1_A029 Roots plus add... 163 2e-039
gb|CV033546.1|CV033546 RTNACL1_35_E06.b1_A029 Roots plus ad... 163 2e-039
gb|CV034349.1|CV034349 RTNACL1_40_H01.b1_A029 Roots plus ad... 163 2e-039
gb|CX646961.1|CX646961 COLD1_12_C11.g1_A029 Root cold Pinus... 163 2e-039
gb|CX649211.1|CX649211 COLD1_33_E04.g1_A029 Root cold Pinus... 163 2e-039
gb|DN614421.1|DN614421 EST967471 Subtracted pine embryo lib... 163 2e-039
gb|DR047904.1|DR047904 RTBOR1_5_A02.g2_A029 Roots plus adde... 163 2e-039
gb|DR054786.1|DR054786 RTCA1_19_C07.g1_A029 Roots minus cal... 163 2e-039
gb|DR071109.1|DR071109 RTDK1_17_E03.g1_A029 Roots, dark Pin... 163 2e-039
gb|DR745073.1|DR745073 RTCU1_26_G08.g1_A029 Roots plus adde... 163 2e-039
gb|DR746057.1|DR746057 RTCU1_34_H10.b1_A029 Roots plus adde... 163 2e-039
gb|DR746133.1|DR746133 RTCU1_34_H10.g1_A029 Roots plus adde... 163 2e-039
gb|DR167247.1|DR167247 RTPHOS1_17_D03.g1_A029 Roots minus p... 160 9e-039
gb|CV034430.1|CV034430 RTNACL1_40_H01.g1_A029 Roots plus ad... 159 3e-038
gb|AL750809.1|AL750809 AL750809 RN Pinus pinaster cDNA clon... 158 6e-038
gb|BX250994.1|BX250994 BX250994 Pinus pinaster differenciat... 158 6e-038
gb|BX251464.1|BX251464 BX251464 Pinus pinaster differenciat... 158 6e-038
gb|BX254133.1|BX254133 BX254133 Pinus pinaster differenciat... 158 6e-038
gb|BX254681.1|BX254681 BX254681 Pinus pinaster differenciat... 158 6e-038
gb|CF400272.1|CF400272 RTWW1_4_H08.b1_A015 Well-watered lob... 158 6e-038
gb|CF400281.1|CF400281 RTWW1_4_H08.g1_A015 Well-watered lob... 158 6e-038
gb|CF401156.1|CF401156 RTWW1_10_F05.g1_A015 Well-watered lo... 158 6e-038
gb|CF402349.1|CF402349 RTWW1_19_G11.g1_A015 Well-watered lo... 158 6e-038
gb|CF474079.1|CF474079 RTWW2_18_D02.g1_A021 Well-watered lo... 158 6e-038
gb|CF669626.1|CF669626 RTCNT1_45_C08.b1_A029 Root control P... 158 6e-038
gb|BX675158.1|BX675158 BX675158 RN Pinus pinaster cDNA clon... 158 6e-038
gb|BX676965.1|BX676965 BX676965 RN Pinus pinaster cDNA clon... 158 6e-038
gb|BX678107.1|BX678107 BX678107 RN Pinus pinaster cDNA clon... 158 6e-038
gb|CR354710.1|CR354710 CR354710 Pinus pinaster differenciat... 158 6e-038
gb|CR393854.1|CR393854 CR393854 RN Pinus pinaster cDNA clon... 158 6e-038
gb|CN784193.1|CN784193 EST782884 Sequencing ESTs from loblo... 158 6e-038
gb|CN784356.1|CN784356 EST783047 Sequencing ESTs from loblo... 158 6e-038
gb|CO199361.1|CO199361 GEO1_20_C11.g1_A029 Root gravitropis... 158 6e-038
gb|CO411498.1|CO411498 EST841883 Sequencing ESTs from loblo... 158 6e-038
gb|CO412348.1|CO412348 EST842733 Sequencing ESTs from loblo... 158 6e-038
gb|CO414593.1|CO414593 EST844978 Sequencing ESTs from loblo... 158 6e-038
gb|CO362257.1|CO362257 RTK1_2_H10.b1_A029 Roots minus potas... 158 6e-038
gb|CV033219.1|CV033219 RTNACL1_33_D02.b1_A029 Roots plus ad... 158 6e-038
gb|CV033292.1|CV033292 RTNACL1_33_D02.g1_A029 Roots plus ad... 158 6e-038
gb|CV137829.1|CV137829 EST849038 Sequencing ESTs from loblo... 158 6e-038
gb|CV139146.1|CV139146 EST850355 Sequencing ESTs from loblo... 158 6e-038
gb|CV139214.1|CV139214 EST850423 Sequencing ESTs from loblo... 158 6e-038
gb|CV146524.1|CV146524 EST857733 Sequencing ESTs from loblo... 158 6e-038
gb|CV147423.1|CV147423 EST858632 Sequencing ESTs from loblo... 158 6e-038
gb|CX648197.1|CX648197 COLD1_27_D04.b1_A029 Root cold Pinus... 158 6e-038
gb|DN445912.1|DN445912 EST941711 Sequencing ESTs from loblo... 158 6e-038
gb|DN447063.1|DN447063 EST942862 Sequencing ESTs from loblo... 158 6e-038
gb|DN447252.1|DN447252 EST943051 Sequencing ESTs from loblo... 158 6e-038
gb|DN448595.1|DN448595 EST944394 Sequencing ESTs from loblo... 158 6e-038
gb|DN448920.1|DN448920 EST944719 Sequencing ESTs from loblo... 158 6e-038
gb|DN460158.1|DN460158 EST955957 Sequencing ESTs from loblo... 158 6e-038
gb|DN460831.1|DN460831 EST956630 Sequencing ESTs from loblo... 158 6e-038
gb|DN461726.1|DN461726 EST957525 Sequencing ESTs from loblo... 158 6e-038
gb|DN463059.1|DN463059 EST958858 Sequencing ESTs from loblo... 158 6e-038
gb|DN463275.1|DN463275 EST959074 Sequencing ESTs from loblo... 158 6e-038
gb|DR017593.1|DR017593 STRS1_17_F11.b1_A034 Shoot tip pitch... 158 6e-038
gb|DR017676.1|DR017676 STRS1_17_F11.g1_A034 Shoot tip pitch... 158 6e-038
gb|DR021852.1|DR021852 STRS1_47_G09.b1_A034 Shoot tip pitch... 158 6e-038
gb|DR080763.1|DR080763 RTFEPL1_25_C04.b1_A029 Roots plus ad... 158 6e-038
gb|DR080834.1|DR080834 RTFEPL1_25_C04.g1_A029 Roots plus ad... 158 6e-038
gb|DR098052.1|DR098052 STRR1_38_G04.g1_A033 Stem Response R... 158 6e-038
gb|DR100045.1|DR100045 STRR1_61_E05.b1_A033 Stem Response R... 158 6e-038
gb|DR385102.1|DR385102 RTHG1_6_D08.g1_A029 Roots plus added... 158 6e-038
gb|DT625780.1|DT625780 EST1157704 Sequencing ESTs from lobl... 158 6e-038
emb|AJ306722.1|PPI306722 Pinus pinaster mRNA for putative h... 158 6e-038
gb|BX250078.1|BX250078 BX250078 Pinus pinaster differenciat... 157 8e-038
gb|BE496468.1|BE496468 NXCI_018_E02_F NXCI (Nsf Xylem Compr... 157 8e-038
gb|BF220580.1|BF220580 NXCI_149_A12_F NXCI (Nsf Xylem Compr... 157 8e-038
gb|BM133673.1|BM133673 NXLV_010_F06_F NXLV (Nsf Xylem Late ... 157 8e-038
gb|BQ696335.1|BQ696335 NXPV_041_C03_F NXPV (Nsf Xylem Plani... 157 8e-038
gb|BQ696701.1|BQ696701 NXPV_044_D07_F NXPV (Nsf Xylem Plani... 157 8e-038
gb|CF470256.1|CF470256 RTDS1_18_D07.b1_A015 Drought-stresse... 157 8e-038
gb|CF472914.1|CF472914 RTDS1_12_D12.g1_A015 Drought-stresse... 157 8e-038
gb|CF477861.1|CF477861 RTWW3_13_H02.g1_A022 Well-watered lo... 157 8e-038
gb|CF663181.1|CF663181 RTCNT1_1_G02.b1_A029 Root control Pi... 157 8e-038
gb|CF664342.1|CF664342 RTCNT1_9_E02.b1_A029 Root control Pi... 157 8e-038
gb|CF665031.1|CF665031 RTCNT1_13_A08.g1_A029 Root control P... 157 8e-038
gb|CF666308.1|CF666308 RTCNT1_22_H04.b1_A029 Root control P... 157 8e-038
gb|CF667281.1|CF667281 RTCNT1_29_E12.b1_A029 Root control P... 157 8e-038
gb|CF673146.1|CF673146 RTCNT1_76_A08.g1_A029 Root control P... 157 8e-038
gb|CO159408.1|CO159408 FLD1_13_H10.b1_A029 Root flooded Pin... 157 8e-038
gb|CO163669.1|CO163669 FLD1_43_B12.b1_A029 Root flooded Pin... 157 8e-038
gb|CO163748.1|CO163748 FLD1_43_B12.g1_A029 Root flooded Pin... 157 8e-038
gb|CO169406.1|CO169406 NDL1_6_G09.g1_A029 Needles control P... 157 8e-038
gb|CO171006.1|CO171006 NDL1_18_H10.b1_A029 Needles control ... 157 8e-038
gb|CO173427.1|CO173427 NDL1_36_E03.b1_A029 Needles control ... 157 8e-038
gb|CO175445.1|CO175445 NDL1_54_F10.g1_A029 Needles control ... 157 8e-038
gb|CO176043.1|CO176043 NDL1_59_F03.b1_A029 Needles control ... 157 8e-038
gb|CO411277.1|CO411277 EST841662 Sequencing ESTs from loblo... 157 8e-038
gb|CO413570.1|CO413570 EST843955 Sequencing ESTs from loblo... 157 8e-038
gb|CO361831.1|CO361831 NDL2_7_H05.b1_A029 Needles control 2... 157 8e-038
gb|CO361909.1|CO361909 NDL2_7_H05.g1_A029 Needles control 2... 157 8e-038
gb|CO365885.1|CO365885 RTK1_19_G04.g1_A029 Roots minus pota... 157 8e-038
gb|CO367432.1|CO367432 RTK1_34_F05.b1_A029 Roots minus pota... 157 8e-038
gb|CO369090.1|CO369090 RTK1_44_H06.g1_A029 Roots minus pota... 157 8e-038
gb|CO370000.1|CO370000 RTK1_55_H08.g1_A029 Roots minus pota... 157 8e-038
gb|CV033898.1|CV033898 RTNACL1_37_F12.b1_A029 Roots plus ad... 157 8e-038
gb|CV033979.1|CV033979 RTNACL1_37_F12.g1_A029 Roots plus ad... 157 8e-038
gb|DN446881.1|DN446881 EST942680 Sequencing ESTs from loblo... 157 8e-038
gb|DN447650.1|DN447650 EST943449 Sequencing ESTs from loblo... 157 8e-038
gb|DR011421.1|DR011421 HEAT1_5_D05.g1_A029 Root at 37 C for... 157 8e-038
gb|DR014309.1|DR014309 HEAT1_24_E07.g1_A029 Root at 37 C fo... 157 8e-038
gb|DR047640.1|DR047640 RTBOR1_2_A02.g1_A029 Roots plus adde... 157 8e-038
gb|DR048842.1|DR048842 RTBOR1_11_C10.g1_A029 Roots plus add... 157 8e-038
gb|DR050887.1|DR050887 RTBOR1_26_G04.b1_A029 Roots plus add... 157 8e-038
gb|DR051187.1|DR051187 RTBOR1_28_F04.b1_A029 Roots plus add... 157 8e-038
gb|DR071875.1|DR071875 RTDK1_22_D03.g1_A029 Roots, dark Pin... 157 8e-038
gb|DR091366.1|DR091366 RTAL1_21_C11.b1_A029 Roots plus adde... 157 8e-038
gb|DR095688.1|DR095688 STRR1_22_H11.g1_A033 Stem Response R... 157 8e-038
gb|DR112353.1|DR112353 RTS1_27_D01.g1_A029 Roots minus sulf... 157 8e-038
gb|DR168570.1|DR168570 RTPHOS1_26_H07.b1_A029 Roots minus p... 157 8e-038
gb|DR179016.1|DR179016 RTMNUT1_15_A09.g1_A029 Roots minus m... 157 8e-038
gb|DR179171.1|DR179171 RTMNUT1_16_A08.g1_A029 Roots minus m... 157 8e-038
gb|DR181331.1|DR181331 RTMNUT1_38_F01.b2_A029 Roots minus m... 157 8e-038
gb|DR181408.1|DR181408 RTMNUT1_38_F01.g2_A029 Roots minus m... 157 8e-038
gb|DR387120.1|DR387120 RTHG1_19_C10.g1_A029 Roots plus adde... 157 8e-038
gb|DR682909.1|DR682909 EST1072984 Normalized pine embryo li... 157 8e-038
gb|DR682910.1|DR682910 EST1072985 Normalized pine embryo li... 157 8e-038
gb|DR682938.1|DR682938 EST1073013 Normalized pine embryo li... 157 8e-038
gb|DR742581.1|DR742581 RTCU1_5_E01.b2_A029 Roots plus added... 157 8e-038
gb|DR742659.1|DR742659 RTCU1_5_E01.g2_A029 Roots plus added... 157 8e-038
gb|DT625474.1|DT625474 EST1157398 Sequencing ESTs from lobl... 157 8e-038
gb|DT625969.1|DT625969 EST1157893 Sequencing ESTs from lobl... 157 8e-038
gb|AW289442.1|AW289442 NXNV001E11F Nsf Xylem Normal wood Ve... 156 2e-037
gb|CD028061.1|CD028061 NXNV001E11 Nsf Xylem Normal wood Ver... 156 2e-037
gb|CX650270.1|CX650270 COLD1_44_C07.g1_A029 Root cold Pinus... 156 2e-037
gb|CX649835.1|CX649835 COLD1_41_F08.g1_A029 Root cold Pinus... 156 2e-037
gb|DR693347.1|DR693347 EST1083435 Normalized pine embryo li... 156 2e-037
gb|DT637835.1|DT637835 EST1152766 Normalized pine embryo li... 156 2e-037
gb|BE451918.1|BE451918 NXCI_006_C06_F NXCI (Nsf Xylem Compr... 155 3e-037
gb|CF385429.1|CF385429 RTDR1_3_G07.g1_A015 Loblolly pine ro... 155 3e-037
gb|CN785187.1|CN785187 EST783878 Sequencing ESTs from loblo... 155 3e-037
gb|CO363267.1|CO363267 RTK1_8_E01.g1_A029 Roots minus potas... 155 3e-037
gb|CO367511.1|CO367511 RTK1_34_F05.g1_A029 Roots minus pota... 155 3e-037
gb|CX646684.1|CX646684 COLD1_10_H03.g1_A029 Root cold Pinus... 155 3e-037
gb|DN460891.1|DN460891 EST956690 Sequencing ESTs from loblo... 155 3e-037
gb|DN461916.1|DN461916 EST957715 Sequencing ESTs from loblo... 155 3e-037
gb|DN462508.1|DN462508 EST958307 Sequencing ESTs from loblo... 155 3e-037
gb|DN463075.1|DN463075 EST958874 Sequencing ESTs from loblo... 155 3e-037
gb|DN464996.1|DN464996 EST960795 Sequencing ESTs from loblo... 155 3e-037
gb|DR023157.1|DR023157 STRS1_55_G05.g1_A034 Shoot tip pitch... 155 3e-037
gb|DT625722.1|DT625722 EST1157646 Sequencing ESTs from lobl... 155 3e-037
gb|DT626970.1|DT626970 EST1160046 Sequencing ESTs from lobl... 155 3e-037
gb|DT627114.1|DT627114 EST1160190 Sequencing ESTs from lobl... 155 3e-037
gb|DR078780.1|DR078780 RTFEPL1_6_G02.g1_A029 Roots plus add... 155 4e-037
gb|CV138042.1|CV138042 EST849251 Sequencing ESTs from loblo... 139 6e-037
gb|CF393367.1|CF393367 RTDR3_20_B09.g1_A022 Loblolly pine r... 154 8e-037
gb|CF401449.1|CF401449 RTWW1_12_H03.g1_A015 Well-watered lo... 154 8e-037
gb|CF477294.1|CF477294 RTWW3_6_H10.g1_A022 Well-watered lob... 154 8e-037
gb|CF665075.1|CF665075 RTCNT1_13_F08.g1_A029 Root control P... 154 8e-037
gb|CF665557.1|CF665557 RTCNT1_16_F07.g1_A029 Root control P... 154 8e-037
gb|CF672249.1|CF672249 RTCNT1_62_G12.b1_A029 Root control P... 154 8e-037
gb|CF672335.1|CF672335 RTCNT1_62_G12.g1_A029 Root control P... 154 8e-037
gb|CN784240.1|CN784240 EST782931 Sequencing ESTs from loblo... 154 8e-037
gb|CN785398.1|CN785398 EST784089 Sequencing ESTs from loblo... 154 8e-037
gb|CO412515.1|CO412515 EST842900 Sequencing ESTs from loblo... 154 8e-037
gb|CO412987.1|CO412987 EST843372 Sequencing ESTs from loblo... 154 8e-037
gb|CO414265.1|CO414265 EST844650 Sequencing ESTs from loblo... 154 8e-037
gb|CO414384.1|CO414384 EST844769 Sequencing ESTs from loblo... 154 8e-037
gb|CO414486.1|CO414486 EST844871 Sequencing ESTs from loblo... 154 8e-037
gb|CV135710.1|CV135710 EST846919 Sequencing ESTs from loblo... 154 8e-037
gb|CV137056.1|CV137056 EST848265 Sequencing ESTs from loblo... 154 8e-037
gb|CV137816.1|CV137816 EST849025 Sequencing ESTs from loblo... 154 8e-037
gb|CV137910.1|CV137910 EST849119 Sequencing ESTs from loblo... 154 8e-037
gb|CV138138.1|CV138138 EST849347 Sequencing ESTs from loblo... 154 8e-037
gb|CV138353.1|CV138353 EST849562 Sequencing ESTs from loblo... 154 8e-037
gb|CV138705.1|CV138705 EST849914 Sequencing ESTs from loblo... 154 8e-037
gb|CV138731.1|CV138731 EST849940 Sequencing ESTs from loblo... 154 8e-037
gb|CV144522.1|CV144522 EST855731 Sequencing ESTs from loblo... 154 8e-037
gb|CX646750.1|CX646750 COLD1_11_F11.b1_A029 Root cold Pinus... 154 8e-037
gb|CX650154.1|CX650154 COLD1_43_G07.g1_A029 Root cold Pinus... 154 8e-037
gb|DN448091.1|DN448091 EST943890 Sequencing ESTs from loblo... 154 8e-037
gb|DN448633.1|DN448633 EST944432 Sequencing ESTs from loblo... 154 8e-037
gb|DN448658.1|DN448658 EST944457 Sequencing ESTs from loblo... 154 8e-037
gb|DN453080.1|DN453080 EST948879 Sequencing ESTs from loblo... 154 8e-037
gb|DN457398.1|DN457398 EST953197 Sequencing ESTs from loblo... 154 8e-037
gb|DN457453.1|DN457453 EST953252 Sequencing ESTs from loblo... 154 8e-037
gb|DN459607.1|DN459607 EST955406 Sequencing ESTs from loblo... 154 8e-037
gb|DN459853.1|DN459853 EST955652 Sequencing ESTs from loblo... 154 8e-037
gb|DN461296.1|DN461296 EST957095 Sequencing ESTs from loblo... 154 8e-037
gb|DN462460.1|DN462460 EST958259 Sequencing ESTs from loblo... 154 8e-037
gb|DN462969.1|DN462969 EST958768 Sequencing ESTs from loblo... 154 8e-037
gb|DN464088.1|DN464088 EST959887 Sequencing ESTs from loblo... 154 8e-037
gb|DR691506.1|DR691506 EST1081593 Normalized pine embryo li... 154 8e-037
gb|DT624401.1|DT624401 EST1158676 Sequencing ESTs from lobl... 154 8e-037
gb|DT627107.1|DT627107 EST1160183 Sequencing ESTs from lobl... 154 8e-037
gb|BX252651.1|BX252651 BX252651 Pinus pinaster differenciat... 154 1e-036
gb|BX252660.1|BX252660 BX252660 Pinus pinaster differenciat... 154 1e-036
gb|CF388604.1|CF388604 RTDR2_4_D05.g1_A021 Loblolly pine ro... 154 1e-036
gb|CF400922.1|CF400922 RTWW1_8_C09.g1_A015 Well-watered lob... 154 1e-036
gb|CN784170.1|CN784170 EST782861 Sequencing ESTs from loblo... 154 1e-036
gb|CN784233.1|CN784233 EST782924 Sequencing ESTs from loblo... 154 1e-036
gb|CN784251.1|CN784251 EST782942 Sequencing ESTs from loblo... 154 1e-036
gb|CN785190.1|CN785190 EST783881 Sequencing ESTs from loblo... 154 1e-036
gb|CO166834.1|CO166834 FLD1_64_H02.g1_A029 Root flooded Pin... 154 1e-036
gb|CO409639.1|CO409639 EST840024 Sequencing ESTs from loblo... 154 1e-036
gb|CO409844.1|CO409844 EST840229 Sequencing ESTs from loblo... 154 1e-036
gb|CO410453.1|CO410453 EST840838 Sequencing ESTs from loblo... 154 1e-036
gb|CO411472.1|CO411472 EST841857 Sequencing ESTs from loblo... 154 1e-036
gb|CO411846.1|CO411846 EST842231 Sequencing ESTs from loblo... 154 1e-036
gb|CV137306.1|CV137306 EST848515 Sequencing ESTs from loblo... 154 1e-036
gb|CV137719.1|CV137719 EST848928 Sequencing ESTs from loblo... 154 1e-036
gb|CV138370.1|CV138370 EST849579 Sequencing ESTs from loblo... 154 1e-036
gb|CV144315.1|CV144315 EST855524 Sequencing ESTs from loblo... 154 1e-036
gb|CX650193.1|CX650193 COLD1_44_C10.b1_A029 Root cold Pinus... 154 1e-036
gb|CX650273.1|CX650273 COLD1_44_C10.g1_A029 Root cold Pinus... 154 1e-036
gb|DN447487.1|DN447487 EST943286 Sequencing ESTs from loblo... 154 1e-036
gb|DN458040.1|DN458040 EST953839 Sequencing ESTs from loblo... 154 1e-036
gb|DN460103.1|DN460103 EST955902 Sequencing ESTs from loblo... 154 1e-036
gb|DN460247.1|DN460247 EST956046 Sequencing ESTs from loblo... 154 1e-036
gb|DN462369.1|DN462369 EST958168 Sequencing ESTs from loblo... 154 1e-036
gb|DN462568.1|DN462568 EST958367 Sequencing ESTs from loblo... 154 1e-036
gb|DN463442.1|DN463442 EST959241 Sequencing ESTs from loblo... 154 1e-036
gb|DN463525.1|DN463525 EST959324 Sequencing ESTs from loblo... 154 1e-036
gb|DN463571.1|DN463571 EST959370 Sequencing ESTs from loblo... 154 1e-036
gb|DN465023.1|DN465023 EST960822 Sequencing ESTs from loblo... 154 1e-036
gb|DN465042.1|DN465042 EST960841 Sequencing ESTs from loblo... 154 1e-036
gb|DR059737.1|DR059737 RTNIT1_19_B03.g1_A029 Roots minus ni... 154 1e-036
gb|DR078698.1|DR078698 RTFEPL1_6_G02.b1_A029 Roots plus add... 154 1e-036
gb|DR117036.1|DR117036 RTMG1_4_G08.b1_A029 Roots minus magn... 154 1e-036
gb|DR117114.1|DR117114 RTMG1_4_G08.g1_A029 Roots minus magn... 154 1e-036
gb|DR387887.1|DR387887 RTHG1_24_G01.g2_A029 Roots plus adde... 154 1e-036
gb|DR690161.1|DR690161 EST1080247 Normalized pine embryo li... 154 1e-036
gb|DT625622.1|DT625622 EST1157546 Sequencing ESTs from lobl... 154 1e-036
gb|DT626496.1|DT626496 EST1158420 Sequencing ESTs from lobl... 154 1e-036
gb|DT626794.1|DT626794 EST1159870 Sequencing ESTs from lobl... 154 1e-036
gb|DT627405.1|DT627405 EST1160481 Sequencing ESTs from lobl... 154 1e-036
gb|DT627481.1|DT627481 EST1160557 Sequencing ESTs from lobl... 154 1e-036
gb|BG276018.1|BG276018 NXSI_147_E09_F NXSI (Nsf Xylem Side ... 152 3e-036
gb|DR693973.1|DR693973 EST1084063 Normalized pine embryo li... 152 3e-036
gb|AA557120.1|AA557120 962 Loblolly pine N Pinus taeda cDNA... 152 4e-036
gb|CF392359.1|CF392359 RTDR3_7_A08.g1_A022 Loblolly pine ro... 152 4e-036
gb|CF669708.1|CF669708 RTCNT1_45_C08.g1_A029 Root control P... 152 4e-036
gb|BX680393.1|BX680393 BX680393 RS Pinus pinaster cDNA clon... 152 4e-036
gb|CO362332.1|CO362332 RTK1_2_H10.g1_A029 Roots minus potas... 152 4e-036
gb|DR071572.1|DR071572 RTDK1_20_F05.g1_A029 Roots, dark Pin... 152 4e-036
gb|DT627400.1|DT627400 EST1160476 Sequencing ESTs from lobl... 152 4e-036
gb|BE582209.1|BE582209 NXCI_026_D02_F NXCI (Nsf Xylem Compr... 151 5e-036
gb|BQ702589.1|BQ702589 NXSI_130_C08_F NXSI (Nsf Xylem Side ... 151 5e-036
gb|CO369012.1|CO369012 RTK1_44_H06.b1_A029 Roots minus pota... 151 5e-036
gb|DR168642.1|DR168642 RTPHOS1_26_H07.g1_A029 Roots minus p... 151 5e-036
gb|BX251880.1|BX251880 BX251880 Pinus pinaster differenciat... 151 7e-036
gb|CF393214.1|CF393214 RTDR3_17_H05.g1_A022 Loblolly pine r... 151 7e-036
gb|CO198947.1|CO198947 GEO1_17_E03.g1_A029 Root gravitropis... 151 7e-036
gb|CV036008.1|CV036008 RTNACL1_44_B05.b1_A029 Roots plus ad... 151 7e-036
gb|CV036073.1|CV036073 RTNACL1_44_B05.g1_A029 Roots plus ad... 151 7e-036
gb|CX712257.1|CX712257 RTPQ1_1_H02.b2_A032 Roots treated wi... 151 7e-036
gb|CX712337.1|CX712337 RTPQ1_1_H02.g1_A032 Roots treated wi... 151 7e-036
gb|DN608669.1|DN608669 EST961719 Subtracted pine embryo lib... 151 7e-036
gb|DN609933.1|DN609933 EST962983 Subtracted pine embryo lib... 151 7e-036
gb|DN610625.1|DN610625 EST963675 Subtracted pine embryo lib... 151 7e-036
gb|DN610988.1|DN610988 EST964038 Subtracted pine embryo lib... 151 7e-036
gb|DN611518.1|DN611518 EST964568 Subtracted pine embryo lib... 151 7e-036
gb|DN612186.1|DN612186 EST965236 Subtracted pine embryo lib... 151 7e-036
gb|DN612334.1|DN612334 EST965384 Subtracted pine embryo lib... 151 7e-036
gb|DN612461.1|DN612461 EST965511 Subtracted pine embryo lib... 151 7e-036
gb|DN612905.1|DN612905 EST965955 Subtracted pine embryo lib... 151 7e-036
gb|DN613990.1|DN613990 EST967040 Subtracted pine embryo lib... 151 7e-036
gb|DN614514.1|DN614514 EST967564 Subtracted pine embryo lib... 151 7e-036
gb|DN615426.1|DN615426 EST968476 Subtracted pine embryo lib... 151 7e-036
gb|DR011339.1|DR011339 HEAT1_5_D05.b1_A029 Root at 37 C for... 151 7e-036
gb|DR048762.1|DR048762 RTBOR1_11_C10.b1_A029 Roots plus add... 151 7e-036
gb|DR050984.1|DR050984 RTBOR1_27_A05.b1_A029 Roots plus add... 151 7e-036
gb|DR089359.1|DR089359 RTAL1_8_E03.b1_A029 Roots plus added... 151 7e-036
gb|DR119613.1|DR119613 RTMG1_24_H03.b1_A029 Roots minus mag... 151 7e-036
gb|DR120156.1|DR120156 RTMG1_27_H02.g2_A029 Roots minus mag... 151 7e-036
gb|DR160781.1|DR160781 RTFE1_8_B08.b1_A029 Roots minus iron... 151 7e-036
gb|DR160869.1|DR160869 RTFE1_8_B08.g1_A029 Roots minus iron... 151 7e-036
gb|DR744337.1|DR744337 RTCU1_21_G04.g1_A029 Roots plus adde... 151 7e-036
gb|AL749545.1|AL749545 AL749545 AN Pinus pinaster cDNA clon... 150 1e-035
gb|BX253768.1|BX253768 BX253768 Pinus pinaster differenciat... 150 1e-035
gb|BF609678.1|BF609678 NXSI_048_A08_F NXSI (Nsf Xylem Side ... 150 1e-035
gb|BG040563.1|BG040563 NXSI_112_F03_F NXSI (Nsf Xylem Side ... 150 1e-035
gb|BG040854.1|BG040854 NXSI_116_A05_F NXSI (Nsf Xylem Side ... 150 1e-035
gb|BQ701637.1|BQ701637 NXSI_111_H05_F NXSI (Nsf Xylem Side ... 150 1e-035
gb|CF389591.1|CF389591 RTDR2_8_E07.g1_A021 Loblolly pine ro... 150 1e-035
gb|CF402318.1|CF402318 RTWW1_19_H08.g1_A015 Well-watered lo... 150 1e-035
gb|CF471337.1|CF471337 RTDS1_2_G01.g1_A015 Drought-stressed... 150 1e-035
gb|CF471605.1|CF471605 RTDS1_4_B01.g1_A015 Drought-stressed... 150 1e-035
gb|CF472436.1|CF472436 RTDS1_9_D03.g1_A015 Drought-stressed... 150 1e-035
gb|CF472560.1|CF472560 RTDS1_10_D03.g1_A015 Drought-stresse... 150 1e-035
gb|CF472961.1|CF472961 RTDS1_12_G08.g1_A015 Drought-stresse... 150 1e-035
gb|CF474766.1|CF474766 RTWW2_7_E01.g1_A021 Well-watered lob... 150 1e-035
gb|CF474791.1|CF474791 RTWW2_7_D01.g1_A021 Well-watered lob... 150 1e-035
gb|CF477108.1|CF477108 RTWW3_5_E10.g1_A022 Well-watered lob... 150 1e-035
gb|CF665955.1|CF665955 RTCNT1_19_E04.g1_A029 Root control P... 150 1e-035
gb|BX681960.1|BX681960 BX681960 RS Pinus pinaster cDNA clon... 150 1e-035
gb|CO159444.1|CO159444 FLD1_13_D06.g1_A029 Root flooded Pin... 150 1e-035
gb|CO411582.1|CO411582 EST841967 Sequencing ESTs from loblo... 150 1e-035
gb|CV135542.1|CV135542 EST846751 Sequencing ESTs from loblo... 150 1e-035
gb|CV136450.1|CV136450 EST847659 Sequencing ESTs from loblo... 150 1e-035
gb|CV148406.1|CV148406 EST859615 Sequencing ESTs from loblo... 150 1e-035
gb|CX650052.1|CX650052 COLD1_43_E10.b1_A029 Root cold Pinus... 150 1e-035
gb|DN445799.1|DN445799 EST941598 Sequencing ESTs from loblo... 150 1e-035
gb|DN448592.1|DN448592 EST944391 Sequencing ESTs from loblo... 150 1e-035
gb|DN457518.1|DN457518 EST953317 Sequencing ESTs from loblo... 150 1e-035
gb|DN458210.1|DN458210 EST954009 Sequencing ESTs from loblo... 150 1e-035
gb|DN458427.1|DN458427 EST954226 Sequencing ESTs from loblo... 150 1e-035
gb|DN463431.1|DN463431 EST959230 Sequencing ESTs from loblo... 150 1e-035
gb|DN464575.1|DN464575 EST960374 Sequencing ESTs from loblo... 150 1e-035
gb|DN465074.1|DN465074 EST960873 Sequencing ESTs from loblo... 150 1e-035
gb|DR022766.1|DR022766 STRS1_53_G11.b1_A034 Shoot tip pitch... 150 1e-035
gb|DR022844.1|DR022844 STRS1_53_G11.g1_A034 Shoot tip pitch... 150 1e-035
gb|DR055890.1|DR055890 RTCA1_26_D04.g1_A029 Roots minus cal... 150 1e-035
gb|DR094976.1|DR094976 STRR1_18_B01.b1_A033 Stem Response R... 150 1e-035
gb|DR095048.1|DR095048 STRR1_18_B01.g1_A033 Stem Response R... 150 1e-035
gb|DR167906.1|DR167906 RTPHOS1_21_H05.g1_A029 Roots minus p... 150 1e-035
gb|DR743584.1|DR743584 RTCU1_16_G12.g1_A029 Roots plus adde... 150 1e-035
gb|DR745809.1|DR745809 RTCU1_32_E03.g1_A029 Roots plus adde... 150 1e-035
gb|DT626479.1|DT626479 EST1158403 Sequencing ESTs from lobl... 150 1e-035
gb|DT627516.1|DT627516 EST1160592 Sequencing ESTs from lobl... 150 1e-035
gb|AF013803.1| Pinus taeda H2A homolog (lp15) gene, complet... 150 1e-035
gb|DT628534.1|DT628534 EST1157283 Subtracted pine embryo li... 149 3e-035
gb|DT629422.1|DT629422 EST1155992 Subtracted pine embryo li... 149 3e-035
gb|CF472537.1|CF472537 RTDS1_10_D03.b1_A015 Drought-stresse... 149 3e-035
gb|DR015941.1|DR015941 STRS1_6_D12.g1_A034 Shoot tip pitch ... 148 5e-035
gb|BQ701712.1|BQ701712 NXSI_118_G03_F NXSI (Nsf Xylem Side ... 147 9e-035
gb|BI643798.1|BI643798 NXPV_123_A12_F NXPV (Nsf Xylem Plani... 147 1e-034
gb|BQ702183.1|BQ702183 NXSI_125_H04_F NXSI (Nsf Xylem Side ... 147 1e-034
gb|DR072605.1|DR072605 RTDK1_27_A01.g1_A029 Roots, dark Pin... 147 1e-034
gb|BE496493.1|BE496493 NXCI_018_G05_F NXCI (Nsf Xylem Compr... 146 2e-034
gb|CF472348.1|CF472348 RTDS1_9_D03.b1_A015 Drought-stressed... 146 2e-034
gb|CX649442.1|CX649442 COLD1_35_G03.b1_A029 Root cold Pinus... 145 3e-034
gb|BF220941.1|BF220941 NXCI_155_F10_F NXCI (Nsf Xylem Compr... 145 4e-034
gb|DR744264.1|DR744264 RTCU1_21_G04.b1_A029 Roots plus adde... 145 4e-034
gb|BF610173.1|BF610173 NXSI_055_F04_F NXSI (Nsf Xylem Side ... 144 8e-034
gb|CF672869.1|CF672869 RTCNT1_74_B08.g1_A029 Root control P... 121 1e-033
gb|AW042700.1|AW042700 ST23E02 Pine TriplEx shoot tip libra... 138 1e-033
gb|CF474649.1|CF474649 RTWW2_7_D01.b1_A021 Well-watered lob... 143 2e-033
gb|CF474264.1|CF474264 RTWW2_17_F10.g1_A021 Well-watered lo... 142 3e-033
gb|BX678702.1|BX678702 BX678702 RS Pinus pinaster cDNA clon... 142 3e-033
gb|CO370195.1|CO370195 RTK1_66_D09.b1_A029 Roots minus pota... 86 4e-033
gb|BF778470.1|BF778470 NXSI_085_B06_F NXSI (Nsf Xylem Side ... 142 4e-033
gb|CO173214.1|CO173214 NDL1_34_F03.g1_A029 Needles control ... 142 4e-033
gb|CF474455.1|CF474455 RTWW2_20_E04.g1_A021 Well-watered lo... 96 7e-033
gb|CF474313.1|CF474313 RTWW2_20_E04.b1_A021 Well-watered lo... 96 7e-033
gb|DR090874.1|DR090874 RTAL1_17_H12.g1_A029 Roots plus adde... 90 7e-033
gb|BQ701243.1|BQ701243 NXSI_061_C08_F NXSI (Nsf Xylem Side ... 141 8e-033
gb|CF666773.1|CF666773 RTCNT1_26_C06.b1_A029 Root control P... 128 1e-032
gb|BE582352.1|BE582352 NXCI_032_D04_F NXCI (Nsf Xylem Compr... 140 1e-032
gb|CO171084.1|CO171084 NDL1_18_H10.g1_A029 Needles control ... 140 1e-032
gb|DR742490.1|DR742490 RTCU1_4_H03.b1_A029 Roots plus added... 114 2e-032
gb|BQ654795.1|BQ654795 NXRV085_G07_F NXRV (Nsf Xylem Root w... 138 4e-032
gb|CF389156.1|CF389156 RTDR2_13_F01.g1_A021 Loblolly pine r... 97 9e-032
gb|BF609957.1|BF609957 NXSI_053_A09_F NXSI (Nsf Xylem Side ... 137 1e-031
gb|BF186452.1|BF186452 NXCI_137_F05_F NXCI (Nsf Xylem Compr... 135 3e-031
gb|CX646879.1|CX646879 COLD1_12_C11.b1_A029 Root cold Pinus... 134 7e-031
gb|CF667363.1|CF667363 RTCNT1_29_E12.g1_A029 Root control P... 134 9e-031
gb|CO365800.1|CO365800 RTK1_19_G04.b1_A029 Roots minus pota... 134 9e-031
gb|DR097977.1|DR097977 STRR1_38_G04.b1_A033 Stem Response R... 134 9e-031
gb|AI812498.1|AI812498 11H3 Pine Lambda Zap Xylem library P... 124 2e-030
gb|AW981586.1|AW981586 PC14D03 Pine TriplEx pollen cone lib... 111 3e-030
gb|DR012375.1|DR012375 HEAT1_12_H02.b1_A029 Root at 37 C fo... 132 4e-030
gb|AL751269.1|AL751269 AL751269 RS Pinus pinaster cDNA clon... 131 8e-030
gb|BF221151.1|BF221151 NXCI_164_A08_F NXCI (Nsf Xylem Compr... 130 1e-029
gb|BF610366.1|BF610366 NXSI_049_D12_F NXSI (Nsf Xylem Side ... 130 1e-029
gb|CF402267.1|CF402267 RTWW1_19_G11.b1_A015 Well-watered lo... 129 2e-029
gb|CX715793.1|CX715793 RTPQ1_36_C05.g1_A032 Roots treated w... 129 2e-029
gb|BM492742.1|BM492742 NXRV_030_E06_F NXRV (Nsf Xylem Root ... 128 4e-029
gb|DR018969.1|DR018969 STRS1_27_B07.b1_A034 Shoot tip pitch... 128 4e-029
gb|AW736863.1|AW736863 NXNV_083_H04_F Nsf Xylem Normal wood... 124 7e-029
gb|CO370079.1|CO370079 RTK1_65_H02.b1_A029 Roots minus pota... 127 1e-028
gb|DR072250.1|DR072250 RTDK1_25_C01.b1_A029 Roots, dark Pin... 127 1e-028
gb|DT629071.1|DT629071 EST1155641 Subtracted pine embryo li... 127 1e-028
gb|CF664177.1|CF664177 RTCNT1_8_A05.b1_A029 Root control Pi... 126 3e-028
gb|BM428118.1|BM428118 NXRV_009_D03_F NXRV (Nsf Xylem Root ... 122 3e-027
gb|DN445103.1|DN445103 EST940902 Sequencing ESTs from loblo... 122 5e-027
gb|DR079913.1|DR079913 RTFEPL1_18_D07.g1_A029 Roots plus ad... 122 5e-027
gb|DR744999.1|DR744999 RTCU1_26_G08.b1_A029 Roots plus adde... 122 5e-027
gb|CF472840.1|CF472840 RTDS1_12_D12.b1_A015 Drought-stresse... 120 2e-026
gb|BX682259.2|BX682259 BX682259 Pinus pinaster differenciat... 120 2e-026
gb|CO169330.1|CO169330 NDL1_6_G09.b1_A029 Needles control P... 120 2e-026
gb|BQ698036.1|BQ698036 NXPV_063_G10_F NXPV (Nsf Xylem Plani... 119 3e-026
gb|CO370059.1|CO370059 RTK1_65_F02.b1_A029 Roots minus pota... 119 3e-026
gb|CF664044.1|CF664044 RTCNT1_7_A05.b1_A029 Root control Pi... 118 6e-026
gb|CO162561.1|CO162561 FLD1_36_C07.b1_A029 Root flooded Pin... 118 6e-026
gb|CO159489.1|CO159489 FLD1_13_H10.g1_A029 Root flooded Pin... 117 1e-025
gb|AW043384.1|AW043384 ST32G05 Pine TriplEx shoot tip libra... 116 2e-025
gb|CX649131.1|CX649131 COLD1_33_E04.b1_A029 Root cold Pinus... 116 2e-025
gb|DN446933.1|DN446933 EST942732 Sequencing ESTs from loblo... 116 2e-025
gb|CF663263.1|CF663263 RTCNT1_1_G02.g1_A029 Root control Pi... 115 6e-025
gb|DR047833.1|DR047833 RTBOR1_5_A02.b2_A029 Roots plus adde... 113 1e-024
gb|CO199180.1|CO199180 GEO1_19_H07.b1_A029 Root gravitropis... 112 3e-024
gb|CO413764.1|CO413764 EST844149 Sequencing ESTs from loblo... 112 4e-024
gb|DR068597.1|DR068597 RTDK1_1_F05.g1_A029 Roots, dark Pinu... 111 5e-024
gb|BE810189.1|BE810189 NXCI_061_B02_F NXCI (Nsf Xylem Compr... 111 7e-024
gb|DR386446.1|DR386446 RTHG1_15_F08.b1_A029 Roots plus adde... 111 1e-023
gb|CF475879.1|CF475879 RTWW2_15_A07.g1_A021 Well-watered lo... 110 2e-023
gb|CO166767.1|CO166767 FLD1_64_H02.b1_A029 Root flooded Pin... 109 3e-023
gb|BX680976.1|BX680976 BX680976 RS Pinus pinaster cDNA clon... 107 9e-023
gb|DR051258.1|DR051258 RTBOR1_28_F04.g1_A029 Roots plus add... 107 1e-022
gb|DR177804.1|DR177804 RTMNUT1_7_B07.g1_A029 Roots minus mi... 106 2e-022
gb|BF220600.1|BF220600 NXCI_149_C09_F NXCI (Nsf Xylem Compr... 106 2e-022
gb|DR159955.1|DR159955 RTFE1_2_F01.g1_A029 Roots minus iron... 105 4e-022
gb|BF169629.1|BF169629 NXCI_125_E02_F NXCI (Nsf Xylem Compr... 105 6e-022
gb|BE582269.1|BE582269 NXCI_031_C03_F NXCI (Nsf Xylem Compr... 104 8e-022
gb|CF475769.1|CF475769 RTWW2_15_C05.b1_A021 Well-watered lo... 104 8e-022
gb|CO370254.1|CO370254 RTK1_66_D09.g1_A029 Roots minus pota... 76 2e-021
gb|BX252765.1|BX252765 BX252765 Pinus pinaster differenciat... 103 2e-021
gb|BX254590.1|BX254590 BX254590 Pinus pinaster differenciat... 103 2e-021
gb|BX252408.1|BX252408 BX252408 Pinus pinaster differenciat... 102 4e-021
>gb|CF399429.1|CF399429 RTDS3_28_A02.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_28_A02_A022 5', mRNA sequence
Length = 729
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 86 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 265
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 266 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 394
>gb|CF670661.1|CF670661 RTCNT1_51_E10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_51_E10_A029 5', mRNA sequence
Length = 715
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 55 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 234
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 235 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 363
>gb|CO366778.1|CO366778 RTK1_30_B07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_30_B07_A029 3', mRNA sequence
Length = 880
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / -1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 745 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 566
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 565 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 437
>gb|CO366847.1|CO366847 RTK1_30_B07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_30_B07_A029 5', mRNA sequence
Length = 847
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / -3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 770 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 591
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 590 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 462
>gb|CO366925.1|CO366925 RTK1_31_B08.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_31_B08_A029 3', mRNA sequence
Length = 896
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / -1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 761 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 582
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 581 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 453
>gb|CO366996.1|CO366996 RTK1_31_B08.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_31_B08_A029 5', mRNA sequence
Length = 832
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / -3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 767 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 588
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 587 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 459
>gb|CX650190.1|CX650190 COLD1_44_C07.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_44_C07_A029 3', mRNA sequence
Length = 736
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / -2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 624 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 445
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 444 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 316
>gb|DR068947.1|DR068947 RTDK1_3_G06.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_3_G06_A029 5', mRNA sequence
Length = 612
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / -3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 529 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 350
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 349 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 221
>gb|DR072325.1|DR072325 RTDK1_25_C01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_25_C01_A029 5', mRNA sequence
Length = 688
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 126 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 305
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 306 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 434
>gb|DR081091.1|DR081091 RTFEPL1_27_G05.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_27_G05_A029 3', mRNA sequence
Length = 619
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / -2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 510 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 331
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 330 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 202
>gb|DR088529.1|DR088529 RTAL1_2_A12.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_2_A12_A029 5', mRNA sequence
Length = 531
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 123 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 302
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 303 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 431
>gb|DR090049.1|DR090049 RTAL1_12_H11.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_12_H11_A029 3', mRNA sequence
Length = 693
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / -3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 571 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 392
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 391 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 263
>gb|DR110327.1|DR110327 RTS1_10_F06.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_10_F06_A029 3', mRNA sequence
Length = 881
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 133 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 312
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 313 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 441
>gb|DR180399.1|DR180399 RTMNUT1_28_H06.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_28_H06_A029 3', mRNA sequence
Length = 819
Score = 172 bits (370), Expect = 3e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 26 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 205
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 206 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 334
>gb|AW065179.1|AW065179 ST40F05 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST40F05, mRNA sequence
Length = 590
Score = 171 bits (369), Expect = 4e-042
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 144 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 323
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 324 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHXVLLP 452
>gb|CO370161.1|CO370161 RTK1_65_H02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_65_H02_A029 5', mRNA sequence
Length = 654
Score = 169 bits (363), Expect = 3e-041
Identities = 72/103 (69%), Positives = 81/103 (78%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGL FPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 113 VSQSLKAGLPFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 292
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 293 KNRIIPRHLLLAVRNDEELGKLMAGVTIASGGVLPNIHQVLLP 421
>gb|CF395930.1|CF395930 RTDS2_19_D12.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_19_D12_A021 5', mRNA sequence
Length = 508
Score = 166 bits (357), Expect = 2e-040
Identities = 71/103 (68%), Positives = 80/103 (77%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 114 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 293
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEE GKL+AGV IA GGVLPNI+ VLLP
Sbjct: 294 KNRIIPRHLLLAVRNDEE*GKLMAGVNIASGGVLPNIHQVLLP 422
>gb|BG039919.1|BG039919 NXSI_101_E11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_101_E11 5' similar to Arabidopsis thaliana
sequence At5g59870 histone H2A - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 539
Score = 164 bits (352), Expect = 1e-039
Identities = 70/103 (67%), Positives = 79/103 (76%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRIGRYLK+GRY+QR+G GAP GNAARDNK
Sbjct: 132 VSKSLKAGLQFPVGRIGRYLKKGRYAQRLGIGAPVYLAAVLEYLAAEVLELAGNAARDNK 311
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+ ND LGKL+AGVTIA GGVLPNI+ VLLP
Sbjct: 312 KNRIIPRHLLLAVXNDXXLGKLMAGVTIASGGVLPNIHQVLLP 440
>gb|AI812742.1|AI812742 18E7 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 555
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 133 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 312
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 313 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 441
>gb|BX253247.1|BX253247 BX253247 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP080C04 similar to Histone H2A, mRNA
sequence
Length = 663
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 122 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 301
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 302 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 430
>gb|BG275400.1|BG275400 NXSI_141_B06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_141_B06 5' similar to Arabidopsis thaliana
sequence At3g20670 histone H2A, putative see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 496
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 107 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 286
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 287 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 415
>gb|CF397061.1|CF397061 RTDS2_26_B02.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_26_B02_A021 3', mRNA sequence
Length = 652
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 28 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 207
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 208 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 336
>gb|CF397158.1|CF397158 RTDS2_26_B02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_26_B02_A021 5', mRNA sequence
Length = 561
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 114 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 293
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 294 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 422
>gb|CF475821.1|CF475821 RTWW2_15_C05.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_15_C05_A021 5', mRNA sequence
Length = 754
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 79 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 258
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 259 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 387
>gb|CO199257.1|CO199257 GEO1_19_H07.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_19_H07_A029 5', mRNA sequence
Length = 797
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 117 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 296
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 297 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 425
>gb|CO370138.1|CO370138 RTK1_65_F02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_65_F02_A029 5', mRNA sequence
Length = 787
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 128 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 307
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 308 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 436
>gb|CV031601.1|CV031601 RTNACL1_2_C05.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_2_C05_A029 5', mRNA sequence
Length = 811
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 86 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 265
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 266 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 394
>gb|CV033546.1|CV033546 RTNACL1_35_E06.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_35_E06_A029 3', mRNA sequence
Length = 804
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 149 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 328
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 329 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 457
>gb|CV034349.1|CV034349 RTNACL1_40_H01.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_40_H01_A029 3', mRNA sequence
Length = 788
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 66 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 245
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 246 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 374
>gb|CX646961.1|CX646961 COLD1_12_C11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_12_C11_A029 5', mRNA sequence
Length = 865
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 102 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 281
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 282 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 410
>gb|CX649211.1|CX649211 COLD1_33_E04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_33_E04_A029 5', mRNA sequence
Length = 739
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 98 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 277
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 278 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 406
>gb|DN614421.1|DN614421 EST967471 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAC386, mRNA sequence
Length = 724
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 111 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 290
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 291 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 419
>gb|DR047904.1|DR047904 RTBOR1_5_A02.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_5_A02_A029 5', mRNA sequence
Length = 790
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 61 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 240
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 241 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 369
>gb|DR054786.1|DR054786 RTCA1_19_C07.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_19_C07_A029 5', mRNA sequence
Length = 708
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 114 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 293
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 294 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 422
>gb|DR071109.1|DR071109 RTDK1_17_E03.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_17_E03_A029 5', mRNA sequence
Length = 613
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 115 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 294
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 295 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 423
>gb|DR745073.1|DR745073 RTCU1_26_G08.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_26_G08_A029 5', mRNA sequence
Length = 460
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 128 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 307
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 308 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 436
>gb|DR746057.1|DR746057 RTCU1_34_H10.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_34_H10_A029 3', mRNA sequence
Length = 713
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 122 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 301
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 302 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 430
>gb|DR746133.1|DR746133 RTCU1_34_H10.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_34_H10_A029 5', mRNA sequence
Length = 586
Score = 163 bits (350), Expect = 2e-039
Identities = 68/103 (66%), Positives = 78/103 (75%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 101 VTKSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNK 280
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 281 KNRIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 409
>gb|DR167247.1|DR167247 RTPHOS1_17_D03.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_17_D03_A029 5', mRNA sequence
Length = 741
Score = 160 bits (345), Expect = 9e-039
Identities = 67/101 (66%), Positives = 76/101 (75%)
Frame = +3 / +1
Query: 156 RSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKN 335
+SVKAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNKKN
Sbjct: 1 KSVKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLAAVLEYLAAEVLELAGNAARDNKKN 180
Query: 336 RIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
RIIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 181 RIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 303
>gb|CV034430.1|CV034430 RTNACL1_40_H01.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_40_H01_A029 5', mRNA sequence
Length = 507
Score = 159 bits (341), Expect = 3e-038
Identities = 66/103 (64%), Positives = 77/103 (74%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++S+KAGLQFPVGR+ RYLK GRY++RVG GAP GNAARDNK
Sbjct: 110 VTKSLKAGLQFPVGRLARYLKNGRYAKRVGIGAPIFLATVLEYLAAEVLELAGNAARDNK 289
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KN IIPRH+ LA+RND+ELGKLL VTIAHGGV+PNI+ VLLP
Sbjct: 290 KNTIIPRHIQLAVRNDDELGKLLGKVTIAHGGVIPNIHQVLLP 418
>gb|AL750809.1|AL750809 AL750809 RN Pinus pinaster cDNA clone RN07E11 similar to HISTONE
H2A, mRNA sequence
Length = 559
Score = 158 bits (339), Expect = 6e-038
Identities = 67/103 (65%), Positives = 76/103 (73%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 169 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 348
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ VLLP
Sbjct: 349 KNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 477
>gb|BX250994.1|BX250994 BX250994 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP043H07 similar to Histone H2A, mRNA
sequence
Length = 665
Score = 158 bits (339), Expect = 6e-038
Identities = 67/103 (65%), Positives = 76/103 (73%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 179 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 358
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ VLLP
Sbjct: 359 KNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 487
>gb|BX251464.1|BX251464 BX251464 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP049H08 similar to Histone H2A, mRNA
sequence
Length = 698
Score = 158 bits (339), Expect = 6e-038
Identities = 67/103 (65%), Positives = 76/103 (73%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 178 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 357
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ VLLP
Sbjct: 358 KNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 486
>gb|BX254133.1|BX254133 BX254133 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP093H03 similar to Histone H2A, mRNA
sequence
Length = 575
Score = 158 bits (339), Expect = 6e-038
Identities = 67/103 (65%), Positives = 76/103 (73%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 185 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 364
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ VLLP
Sbjct: 365 KNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 493
>gb|BX254681.1|BX254681 BX254681 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP102E09 similar to Histone H2A, mRNA
sequence
Length = 674
Score = 158 bits (339), Expect = 6e-038
Identities = 67/103 (65%), Positives = 76/103 (73%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 185 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 364
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ VLLP
Sbjct: 365 KNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 493
>gb|CF400272.1|CF400272 RTWW1_4_H08.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_4_H08_A015 3', mRNA sequence
Length = 607
Score = 158 bits (339), Expect = 6e-038
Identities = 67/103 (65%), Positives = 76/103 (73%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 37 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 216
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ VLLP
Sbjct: 217 KNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 345
>gb|CF400281.1|CF400281 RTWW1_4_H08.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_4_H08_A015 5', mRNA sequence
Length = 712
Score = 158 bits (339), Expect = 6e-038
Identities = 67/103 (65%), Positives = 76/103 (73%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 121 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 300
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ VLLP
Sbjct: 301 KNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 429
>gb|CF401156.1|CF401156 RTWW1_10_F05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_10_F05_A015 5', mRNA sequence
Length = 743
Score = 158 bits (339), Expect = 6e-038
Identities = 67/103 (65%), Positives = 76/103 (73%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 137 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 316
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ VLLP
Sbjct: 317 KNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 445
>gb|CF402349.1|CF402349 RTWW1_19_G11.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_19_G11_A015 5', mRNA sequence
Length = 726
Score = 158 bits (339), Expect = 6e-038
Identities = 67/103 (65%), Positives = 76/103 (73%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 90 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 269
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ VLLP
Sbjct: 270 KNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 398
>gb|CF474079.1|CF474079 RTWW2_18_D02.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_18_D02_A021 5', mRNA sequence
Length = 703
Score = 158 bits (339), Expect = 6e-038
Identities = 67/103 (65%), Positives = 76/103 (73%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 135 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 314
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ VLLP
Sbjct: 315 KNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 443
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 321,024,057
Number of Sequences: 355925
Number of extensions: 3899824
Number of successful extensions: 69781
Number of sequences better than 1.0e-020: 487
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 12961936240
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)