TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521334.2.1
(1277 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|BD236034.1| Materials and method for modification of pl... 467 e-131
gb|DR118455.1|DR118455 RTMG1_17_C11.b1_A029 Roots minus mag... 390 e-107
gb|DR089733.1|DR089733 RTAL1_10_B01.g1_A029 Roots plus adde... 371 e-102
dbj|BD236037.1| Materials and method for modification of pl... 365 e-100
gb|CX645436.1|CX645436 COLD1_2_F10.g1_A029 Root cold Pinus ... 364 e-100
gb|CF395289.1|CF395289 RTDS2_10_F05.g1_A021 Drought-stresse... 358 4e-098
gb|CO368127.1|CO368127 RTK1_38_F10.g1_A029 Roots minus pota... 347 7e-095
gb|CO370469.1|CO370469 RTK1_68_C11.b1_A029 Roots minus pota... 343 2e-093
gb|DR110698.1|DR110698 RTS1_12_A01.g1_A029 Roots minus sulf... 332 4e-090
dbj|BD236005.1| Materials and method for modification of pl... 314 3e-087
gb|DR021894.1|DR021894 STRS1_47_C06.g1_A034 Shoot tip pitch... 311 8e-084
gb|DT634092.1|DT634092 EST1149023 Normalized pine embryo li... 311 8e-084
gb|DR387861.1|DR387861 RTHG1_24_D03.g2_A029 Roots plus adde... 310 1e-083
gb|DR688160.1|DR688160 EST1078244 Normalized pine embryo li... 304 9e-082
gb|DR687288.1|DR687288 EST1077369 Normalized pine embryo li... 299 3e-080
gb|CF393636.1|CF393636 RTDR3_15_C10.g1_A022 Loblolly pine r... 298 4e-080
gb|DR110618.1|DR110618 RTS1_12_A01.b1_A029 Roots minus sulf... 297 1e-079
gb|DR117549.1|DR117549 RTMG1_7_D09.g1_A029 Roots minus magn... 292 4e-078
gb|DR118532.1|DR118532 RTMG1_17_C11.g1_A029 Roots minus mag... 292 4e-078
gb|DR693927.1|DR693927 EST1084017 Normalized pine embryo li... 186 9e-077
gb|DR071753.1|DR071753 RTDK1_21_H06.g1_A029 Roots, dark Pin... 286 3e-076
gb|DR682440.1|DR682440 EST1072515 Normalized pine embryo li... 281 1e-074
gb|DR682441.1|DR682441 EST1072516 Normalized pine embryo li... 280 1e-074
gb|DT631114.1|DT631114 EST1146045 Normalized pine embryo li... 279 3e-074
gb|DR102479.1|DR102479 STRR1_81_A06.g1_A033 Stem Response R... 279 4e-074
gb|DT638522.1|DT638522 EST1153453 Normalized pine embryo li... 272 3e-072
gb|DT638197.1|DT638197 EST1153128 Normalized pine embryo li... 169 1e-071
gb|DR691737.1|DR691737 EST1081824 Normalized pine embryo li... 264 1e-069
gb|DR071668.1|DR071668 RTDK1_21_H06.b1_A029 Roots, dark Pin... 262 4e-069
gb|DR694455.1|DR694455 EST1084547 Normalized pine embryo li... 237 8e-069
gb|CF390271.1|CF390271 RTDR2_18_E10.g1_A021 Loblolly pine r... 251 9e-066
gb|DR021006.1|DR021006 STRS1_40_E12.g1_A034 Shoot tip pitch... 249 2e-065
gb|CR354730.1|CR354730 CR354730 Pinus pinaster differenciat... 247 2e-064
gb|DR089645.1|DR089645 RTAL1_10_B01.b1_A029 Roots plus adde... 245 6e-064
gb|CO368041.1|CO368041 RTK1_38_F10.b1_A029 Roots minus pota... 243 3e-063
gb|CO370544.1|CO370544 RTK1_68_C11.g1_A029 Roots minus pota... 232 3e-060
gb|CO200581.1|CO200581 GEO2_8_G01.b1_A032 Root gravitropism... 229 3e-059
dbj|BD236038.1| Materials and method for modification of pl... 229 4e-059
dbj|BD236002.1| Materials and method for modification of pl... 226 3e-058
gb|DR387786.1|DR387786 RTHG1_24_D03.b1_A029 Roots plus adde... 221 1e-056
gb|DR020928.1|DR020928 STRS1_40_E12.b1_A034 Shoot tip pitch... 218 6e-056
gb|DR102416.1|DR102416 STRR1_81_A06.b1_A033 Stem Response R... 215 7e-055
gb|DR162787.1|DR162787 RTFE1_20_B06.g1_A029 Roots minus iro... 212 5e-054
gb|DR078956.1|DR078956 RTFEPL1_8_C02.b1_A029 Roots plus add... 147 9e-050
gb|BF518299.1|BF518299 NXSI_037_F05_F NXSI (Nsf Xylem Side ... 192 4e-048
gb|CF393612.1|CF393612 RTDR3_15_C10.b1_A022 Loblolly pine r... 187 1e-046
dbj|BD236035.1| Materials and method for modification of pl... 177 5e-046
gb|DR021811.1|DR021811 STRS1_47_C06.b1_A034 Shoot tip pitch... 180 2e-044
gb|CO200810.1|CO200810 RTCNT2_1_E08.g1_A029 Root control 2 ... 147 1e-043
gb|CF393700.1|CF393700 RTDR3_15_G09.g1_A022 Loblolly pine r... 144 8e-042
gb|DR050495.1|DR050495 RTBOR1_23_H07.g1_A029 Roots plus add... 147 8e-042
gb|DT637075.1|DT637075 EST1152006 Normalized pine embryo li... 170 2e-041
gb|CF390220.1|CF390220 RTDR2_18_E10.b1_A021 Loblolly pine r... 166 4e-040
gb|DR687181.1|DR687181 EST1077260 Normalized pine embryo li... 166 4e-040
gb|CF394019.1|CF394019 RTDS2_2_B12.g1_A021 Drought-stressed... 148 9e-040
gb|BX681955.1|BX681955 BX681955 RS Pinus pinaster cDNA clon... 164 1e-039
gb|CF474706.1|CF474706 RTWW2_7_D09.g1_A021 Well-watered lob... 148 4e-039
gb|CF475175.1|CF475175 RTWW2_14_F07.g1_A021 Well-watered lo... 146 1e-038
gb|DR056919.1|DR056919 RTNIT1_1_H10.b1_A029 Roots minus nit... 147 2e-038
gb|DR047558.1|DR047558 RTBOR1_1_H09.g1_A029 Roots plus adde... 147 2e-038
gb|AA556882.1|AA556882 724 Loblolly pine C Pinus taeda cDNA... 159 5e-038
gb|CO171645.1|CO171645 NDL1_23_A05.g1_A029 Needles control ... 137 7e-038
gb|DR090287.1|DR090287 RTAL1_14_B08.b1_A029 Roots plus adde... 143 1e-037
gb|CF473280.1|CF473280 RTWW2_1_H04.g1_A021 Well-watered lob... 148 1e-037
gb|DR058701.1|DR058701 RTNIT1_13_H07.b1_A029 Roots minus ni... 122 2e-037
gb|DT634672.1|DT634672 EST1149603 Normalized pine embryo li... 150 1e-035
gb|BF060534.1|BF060534 NXCI_116_C11_F NXCI (Nsf Xylem Compr... 149 4e-035
gb|DR177124.1|DR177124 RTMNUT1_3_G01.b1_A029 Roots minus mi... 147 1e-034
dbj|BD236003.1| Materials and method for modification of pl... 146 3e-034
gb|CO198975.1|CO198975 GEO1_17_H02.g1_A029 Root gravitropis... 145 7e-034
gb|DR052795.1|DR052795 RTCA1_6_H10.g1_A029 Roots minus calc... 143 3e-033
gb|BQ198048.1|BQ198048 NXLV124_G08_F NXLV (Nsf Xylem Late w... 137 1e-031
gb|CO200735.1|CO200735 RTCNT2_1_E08.b1_A029 Root control 2 ... 103 2e-031
gb|DN611386.1|DN611386 EST964436 Subtracted pine embryo lib... 65 3e-031
gb|DR079034.1|DR079034 RTFEPL1_8_C02.g1_A029 Roots plus add... 100 9e-031
gb|BE607159.1|BE607159 NXCI_037_F03_F NXCI (Nsf Xylem Compr... 126 3e-028
dbj|BD236036.1| Materials and method for modification of pl... 124 1e-027
gb|BG275254.1|BG275254 NXSI_138_F02_F NXSI (Nsf Xylem Side ... 123 3e-027
gb|CX714265.1|CX714265 RTPQ1_20_B01.b1_A032 Roots treated w... 122 5e-027
gb|BX251484.1|BX251484 BX251484 Pinus pinaster differenciat... 120 2e-026
gb|AW042861.1|AW042861 ST26C10 Pine TriplEx shoot tip libra... 118 9e-026
gb|CX713672.1|CX713672 RTPQ1_11_G04.g1_A032 Roots treated w... 104 2e-025
gb|BQ696363.1|BQ696363 NXPV_040_C07_F NXPV (Nsf Xylem Plani... 116 3e-025
gb|AL750869.1|AL750869 AL750869 RS Pinus pinaster cDNA clon... 116 5e-025
gb|AL750912.1|AL750912 AL750912 RS Pinus pinaster cDNA clon... 113 2e-024
gb|AL750851.1|AL750851 AL750851 RS Pinus pinaster cDNA clon... 113 3e-024
gb|BX250021.1|BX250021 BX250021 Pinus pinaster differenciat... 113 3e-024
gb|BF060461.1|BF060461 NXCI_115_B10_F NXCI (Nsf Xylem Compr... 109 5e-023
gb|CX714308.1|CX714308 RTPQ1_20_B01.g1_A032 Roots treated w... 109 5e-023
gb|AL750902.1|AL750902 AL750902 RS Pinus pinaster cDNA clon... 108 1e-022
gb|AL750852.1|AL750852 AL750852 RS Pinus pinaster cDNA clon... 106 3e-022
gb|DR162742.1|DR162742 RTFE1_20_B06.b1_A029 Roots minus iro... 106 4e-022
gb|BM133768.1|BM133768 NXLV_012_A05_F NXLV (Nsf Xylem Late ... 103 3e-021
gb|BM158403.1|BM158403 NXLV_034_A05_F NXLV (Nsf Xylem Late ... 103 3e-021
gb|BM158503.1|BM158503 NXLV_035_D08_F NXLV (Nsf Xylem Late ... 103 3e-021
gb|BQ198594.1|BQ198594 NXLV133_D07_F NXLV (Nsf Xylem Late w... 103 3e-021
gb|CF473185.1|CF473185 RTWW2_1_H04.b1_A021 Well-watered lob... 103 3e-021
gb|CF474659.1|CF474659 RTWW2_7_D09.b1_A021 Well-watered lob... 103 3e-021
gb|CO173458.1|CO173458 NDL1_36_H03.b1_A029 Needles control ... 103 3e-021
gb|CO198895.1|CO198895 GEO1_17_H02.b1_A029 Root gravitropis... 103 3e-021
gb|DR050421.1|DR050421 RTBOR1_23_H07.b1_A029 Roots plus add... 103 3e-021
gb|DR052711.1|DR052711 RTCA1_6_H10.b1_A029 Roots minus calc... 103 3e-021
gb|DR058791.1|DR058791 RTNIT1_13_H07.g1_A029 Roots minus ni... 103 3e-021
gb|DR070146.1|DR070146 RTDK1_11_C07.g1_A029 Roots, dark Pin... 103 3e-021
gb|DR682092.1|DR682092 EST1072167 Normalized pine embryo li... 102 5e-021
>dbj|BD236034.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 1293
Score = 467 bits (1014), Expect = e-131
Identities = 190/312 (60%), Positives = 236/312 (75%)
Frame = +1 / +2
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+TL VP +PPVADDC+QLR AF GWGTNE LIISILGH YGE+
Sbjct: 95 MSTLTVPQPLPPVADDCEQLRTAFAGWGTNEKLIISILGHRNAAQRKLIRQTYAETYGED 274
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
LL+++ E++ DFER V+LW+LDPAERDA LANEA ++W N+VL+EIACTR+ Q+
Sbjct: 275 LLKALDRELTNDFERLVVLWSLDPAERDAYLANEATKRWTSSNQVLMEIACTRSPQQLLM 454
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+S+EED+A H TGDFRKLLVPL S+YR DG EVN LA +EAK+LHEKI
Sbjct: 455 ARQAYHARYKKSMEEDVAHHTTGDFRKLLVPLGSSYRNDGDEVNMTLAKAEAKILHEKIS 634
Query: 625 HKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFS 804
KAY +++IRIL TRSK Q+ AT NHY + FG+ INKDLK DP+D +L LRA ++C +
Sbjct: 635 EKAYGHEDLIRILATRSKAQVNATLNHYKNEFGNDINKDLKTDPKDAFLTILRATVKCLT 814
Query: 805 CPDRYFEKVARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLERAVAGDTS 984
P++YFEKV R AI GTDE +LTRV+ TRAEVD+K I E YQ+RNS+PL+RA+ DT+
Sbjct: 815 RPEKYFEKVLRLAINKRGTDEGALTRVVATRAEVDMKFISEEYQRRNSIPLDRAIVKDTT 994
Query: 985 GDYESMLLALLG 1020
GDYE MLLAL+G
Sbjct: 995 GDYEKMLLALIG 1030
Score = 194 bits (419), Expect(2) = 5e-060
Identities = 112/241 (46%), Positives = 138/241 (57%)
Frame = -1 / -1
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P +ARS+ S*SP VS ARS G LFL WY+SLI+ STSA V TLVR SSVP MA
Sbjct: 1029 PINARSIFS*SPVVSLTMARSRGMLFLLWYSSLINFMSTSALVATTLVRAPSSVPRLLMA 850
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
TFSKY SG+++H +A S++R +S+GS F+SLLI +PN+ L** +VA++ LLLV +
Sbjct: 849 RRRTFSKYFSGRVRHFTVALSIVRNASFGSVFKSLLISFPNSFL**FSVALTCALLLVAK 670
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXS 480
IFS S LAS A ++ TS PS R* L GT++LRKSPV A
Sbjct: 669 ILMRSSWP*AFSEIFSWSILASAFAKVIFTSSPSLR*ELPRGTSNLRKSPVVW*ATSSSI 490
Query: 479 ERLNRS**ACLVAKICAEVRVQAISTSTRFPGFHFRXXXXXXXXXXXXXXSVHRITALSK 300
+ L R+* ACL C VQAIS T H S R T+LSK
Sbjct: 489 DFLYRA*YACLAISNCCGDLVQAISMRTWLLEVHLFVASFAKYASRSAGSSDQRTTSLSK 310
Query: 299 S 297
S
Sbjct: 309 S 307
Score = 177 bits (380), Expect = 2e-043
Identities = 102/295 (34%), Positives = 159/295 (53%)
Frame = -3 / -3
Query: 1008 EEHALVVAGGVPRDGPLQRHAVPLLVRLLNQFEVHLSAGGDDPGQGVLICA*PRYGLPSH 829
++H +V+ V +G ++R A+P LV L + V+L G + GQ IC+ G +
Sbjct: 1018 QKHFFIVSSSVLDNGTIERDAIPPLVLLTYKLHVNLGPGSNYSGQSPFICSSLIDG*TKN 839
Query: 828 LLKVPVRATEAPDDRPQRSEVLVLGVSLQILVDSVAKCIIVMIECSNQLRFAPSGEDSDD 649
L K+ +RA++A Q S+ V +S QILVD ++K I V+I+ S L FAPS ++ +
Sbjct: 838 LFKILLRASQALYCSSQYSKERVFWISFQILVDIISKLIFVVIQRSIDLCFAPSSQNPYE 659
Query: 648 LIITVSLVMDLLMK*FGF*VCQPCVDLWSIIAVSTYKWHQ*LAEVPSDVRSDVFLKRALE 469
+++ +SL+ DLL++ CQ + L SII V K +Q L ++ S V SDV L
Sbjct: 658 ILMAISLL*DLLVEYLSLCFCQSHIHLISIITVGAPKRYQQLTKISSCVVSDVLFH*LLV 479
Query: 468 PLVISLPGREDLRGGARAGDLDEHTVPGLPLPRRLVGQHRVALRWVQRPQDHGPLEVAGD 289
+I L + L RAG E+ V P RR + Q R+ ++ P+DH PLE+ G
Sbjct: 478 SGMICLSCHKQLLRRPRAGYFHENLVA*SPSFRRFIRQVRITFSRIK*PKDHQPLEIIGK 299
Query: 288 LVRDGAEELLAVGLGVSAADGAALRGVAVAEDGDDERLVRAPPLECFAQLVAVIG 124
EE+LAV LG+ + LR + + + G D+ L+ +P E +L+AVIG
Sbjct: 298 FSVQCLEEVLAVSLGIGLPNQLPLRRIPMTQYGYDQLLICSPSCEGCPELLAVIG 134
Score = 57.9 bits (120), Expect(2) = 5e-060
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = -1 / -1
Query: 200 PRMEMMSASFVPHPWNALRSWSQSSATGGTVAGTLSVAI 84
P M+M+S SFVPHP A+RS SQSSATGG+ GT+ V I
Sbjct: 210 PNMDMISFSFVPHPAKAVRSCSQSSATGGSGCGTVRVDI 94
>gb|DR118455.1|DR118455 RTMG1_17_C11.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_C11_A029 3', mRNA sequence
Length = 891
Score = 390 bits (845), Expect = e-107
Identities = 160/286 (55%), Positives = 208/286 (72%)
Frame = +1 / -3
Query: 91 TLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEELL 270
T+ VPA P +D ++LRKAF+GWGTNE LII ILGH Y E+ L
Sbjct: 862 TIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEEDFL 683
Query: 271 RSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFATR 450
+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++ R
Sbjct: 682 KRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWSVR 503
Query: 451 QAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHK 630
QAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LHE I K
Sbjct: 502 QAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIKDK 323
Query: 631 AYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSCP 810
A+ ++E+IRI+TTRSK QL ATFN+Y D +GH INKDLK +++L +LR +I+C P
Sbjct: 322 AFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFP 143
Query: 811 DRYFEKVARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNS 948
+RYF KV R AI LGTDE +L RV+ TRAE DL IKE Y+KR S
Sbjct: 142 ERYFAKVLRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTS 5
Score = 136 bits (291), Expect(2) = 3e-034
Identities = 92/191 (48%), Positives = 105/191 (54%)
Frame = -1 / +3
Query: 947 LFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMACLATFSKYLSGQLKHRMIARSVLR 768
L L Y+SLI LRS SARV T +R SSVPS ++A L TF+KYLSG+ H + RS R
Sbjct: 6 LVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIANLKTFAKYLSGKQMHLITIRSDSR 185
Query: 767 YSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVRXXXXXXXXXXXXXIFS*SSLASEC 588
SS F+SLLI P +SL**L VA + LLLVV I S + LAS
Sbjct: 186 KSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVIMRMSSSLPKALSFIASCNCLASAF 365
Query: 587 ANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXSERLNRS**ACLVAKICAEVRVQAI 408
A V TSGPS R* LTS T+SLRKSP A + L R * ACL E R I
Sbjct: 366 AKRVSTSGPSYR*ELTS*TSSLRKSP*V*EATSSSRDFL*RI*YACLTDHSSVEDRALEI 545
Query: 407 STSTRFPGFHF 375
S S G HF
Sbjct: 546 SRSDLLFGLHF 578
Score = 33.6 bits (67), Expect(2) = 3e-034
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1 / +3
Query: 200 PRMEMMSASFVPHPWNALRSWSQSSATGGTVAGTLSV 90
P++ +++ SFVP P A S+SS G AGT+ V
Sbjct: 753 PKISIINFSFVPQPSKAFLRRSESSTGDGAGAGTIIV 863
>gb|DR089733.1|DR089733 RTAL1_10_B01.g1_A029 Roots plus added aluminum Pinus taeda cDNA clone
RTAL1_10_B01_A029 5', mRNA sequence
Length = 766
Score = 371 bits (805), Expect = e-102
Identities = 152/255 (59%), Positives = 197/255 (77%)
Frame = +1 / +1
Query: 256 GEELLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQ 435
GE+ L+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S +
Sbjct: 1 GEDFLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTE 180
Query: 436 IFATRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHE 615
+++ RQAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LHE
Sbjct: 181 LWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHE 360
Query: 616 KIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIR 795
I KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH INKDLK +++L +LR +I+
Sbjct: 361 AIKDKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIK 540
Query: 796 CFSCPDRYFEKVARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLERAVAG 975
C P+RYF KV R AI LGTDE +L RV+ TRAE DL IKE Y+KR S LE AVA
Sbjct: 541 CICFPERYFAKVLRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKALEHAVAA 720
Query: 976 DTSGDYESMLLALLG 1020
DTSGDYE +LL L+G
Sbjct: 721 DTSGDYEELLLTLIG 765
Score = 157 bits (337), Expect = 2e-037
Identities = 105/215 (48%), Positives = 120/215 (55%)
Frame = -1 / -3
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 764 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 585
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 584 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 405
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXS 480
I S + LAS A V TSGPS R* LTS T+SLRKSP A
Sbjct: 404 MRMSSSLPKALSFIASCNCLASAFAKRVSTSGPSYR*ELTS*TSSLRKSP*V*EATSSSR 225
Query: 479 ERLNRS**ACLVAKICAEVRVQAISTSTRFPGFHF 375
+ L R * ACL E R IS S G HF
Sbjct: 224 DFL*RI*YACLTDHSSVEDRALEISRSDLLFGLHF 120
>dbj|BD236037.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 789
Score = 365 bits (791), Expect = e-100
Identities = 150/238 (63%), Positives = 184/238 (77%)
Frame = +1 / +1
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
MAT+ VP +VP A+D +QL+KAF GWGTNE LIISIL H YGE+
Sbjct: 73 MATIAVPPSVPSPAEDAEQLQKAFAGWGTNEDLIISILPHRNAAQRKVIRQTYAETYGED 252
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
LL+++ E+S DFER+V+LWTLDPAERDA L+NEA ++ N VL+EIACTR+S ++F
Sbjct: 253 LLKALDKELSSDFERSVLLWTLDPAERDAFLSNEATKRLTSSNWVLMEIACTRSSMELFM 432
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEEDIA H TGDFRKLLVPL ST+RY+GPEVN LA SEAK+LHEKIH
Sbjct: 433 VRQAYHARYKKSLEEDIAYHTTGDFRKLLVPLASTFRYEGPEVNMTLARSEAKILHEKIH 612
Query: 625 HKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRC 798
KAY+ DE+IRI+TTRSK QL AT N+YN+ FG+ INKDLKADP DE+L+ LR+ I+C
Sbjct: 613 EKAYNHDELIRIVTTRSKAQLNATLNYYNNEFGNAINKDLKADPNDEFLKLLRSAIKC 786
Score = 150 bits (323), Expect = 1e-035
Identities = 83/233 (35%), Positives = 126/233 (54%)
Frame = -3 / -1
Query: 780 QRSEVLVLGVSLQILVDSVAKCIIVMIECSNQLRFAPSGEDSDDLIITVSLVMDLLMK*F 601
Q+ + ++ +SLQILVD + K I+V+IE +L F +SD+LI+ VSL+++LLMK
Sbjct: 768 QQFQKFIIWISLQILVDGIPKLIVVVIEGCIKLSFTSCSNNSDELIMIVSLLVNLLMKYL 589
Query: 600 GF*VCQPCVDLWSIIAVSTYKWHQ*LAEVPSDVRSDVFLKRALEPLVISLPGREDLRGGA 421
* Q V L +I T + ++ LAE+PS V DVF KR L +I LP E L
Sbjct: 588 SL*SRQCHVHLRPLIPKGTCQRNKQLAEIPSSVICDVFFKRFLITSMIGLPHHE*LH*RP 409
Query: 420 RAGDLDEHTVPGLPLPRRLVGQHRVALRWVQRPQDHGPLEVAGDLVRDGAEELLAVGLGV 241
RA + E+ V +GQ + LR +Q PQ H L+V + + E++ + LG+
Sbjct: 408 RASNFHENPVARSQSLGSFIGQECITLRRIQGPQKHRSLKVTREFLVKRFEKIFPICLGI 229
Query: 240 SAADGAALRGVAVAEDGDDERLVRAPPLECFAQLVAVIGDGRNSGWDLERCHS 82
+D LR V+V + G D+ +R P E F +L+ ++ RN W + HS
Sbjct: 228 CLSDYFPLRCVSVRQYGYDQIFIRPPSCESFLELLGILSRRRNRRWHRDSRHS 70
Score = 86.3 bits (182), Expect(3) = 1e-034
Identities = 52/111 (46%), Positives = 60/111 (54%)
Frame = -1 / -2
Query: 617 FS*SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXSERLNRS**ACLVAK 438
FS*S LAS+ AN++ TSGPS R VL GT+SLRKSPV AM + L R+**ACL
Sbjct: 605 FS*SILASDLANVMFTSGPSYRKVLARGTSSLRKSPVV*YAMSSSRDFL*RA**ACLTMN 426
Query: 437 ICAEVRVQAISTSTRFPGFHFRXXXXXXXXXXXXXXSVHRITALSKSPEIS 285
E VQAIS T+ + VHR T LSKS E S
Sbjct: 425 NSIEDLVQAISMRTQLLEVNLLVASLDKNASRSAGSRVHRSTDLSKSLESS 273
Score = 56.1 bits (116), Expect(3) = 1e-034
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = -1 / -2
Query: 800 KHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVV 663
KH + S R SS+GSAFRSLL+ +PN+ L**L VA+S* LLLVV
Sbjct: 788 KHLIADLSSFRNSSFGSAFRSLLMAFPNSLL**LRVALS*ALLLVV 651
Score = 43.7 bits (89), Expect(3) = 1e-034
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = -1 / -2
Query: 194 MEMMSASFVPHPWNALRSWSQSSATGGTVAGTLSVAI 84
M+M+ +SFVPHP A S S SSA GT GT VAI
Sbjct: 182 MDMIRSSFVPHPAKAFWSCSASSAGDGTDGGTAIVAI 72
>gb|CX645436.1|CX645436 COLD1_2_F10.g1_A029 Root cold Pinus taeda cDNA clone COLD1_2_F10_A029
5', mRNA sequence
Length = 768
Score = 364 bits (790), Expect = e-100
Identities = 149/250 (59%), Positives = 194/250 (77%)
Frame = +1 / +1
Query: 277 ITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFATRQA 456
+ E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++ RQA
Sbjct: 4 LQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWSVRQA 183
Query: 457 YHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAY 636
YH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LHE I KA+
Sbjct: 184 YHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIKDKAF 363
Query: 637 SDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDR 816
++E+IRI+TTRSK QL ATFN+Y D +GH INKDLK +++L +LR +I+C P+R
Sbjct: 364 GNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPER 543
Query: 817 YFEKVARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLERAVAGDTSGDYE 996
YF KV R AI LGTDE +L RV+ TRAE DL IKE Y+KR S LE AVA DTSGDYE
Sbjct: 544 YFAKVLRLAIDKLGTDEEALIRVVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYE 723
Query: 997 SMLLALLGQE 1026
+LL L+G++
Sbjct: 724 ELLLTLIGKQ 753
Score = 157 bits (337), Expect = 2e-037
Identities = 105/215 (48%), Positives = 120/215 (55%)
Frame = -1 / -2
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 746 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 567
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 566 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 387
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXS 480
I S + LAS A V TSGPS R* LTS T+SLRKSP A
Sbjct: 386 MRMSSSLPKALSFIASCNCLASAFAKRVSTSGPSYR*ELTS*TSSLRKSP*V*EATSSSR 207
Query: 479 ERLNRS**ACLVAKICAEVRVQAISTSTRFPGFHF 375
+ L R * ACL E R IS S G HF
Sbjct: 206 DFL*RI*YACLTDHSSVEDRALEISRSDLLFGLHF 102
>gb|CF395289.1|CF395289 RTDS2_10_F05.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_10_F05_A021 5', mRNA sequence
Length = 757
Score = 358 bits (777), Expect = 4e-098
Identities = 147/243 (60%), Positives = 189/243 (77%)
Frame = +1 / +2
Query: 298 DFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFATRQAYHERFKR 477
DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++ RQAYH R+K+
Sbjct: 5 DFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWSVRQAYHIRYKK 184
Query: 478 SLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYSDDEIIR 657
SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LHE I KA+ ++E+IR
Sbjct: 185 SLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIKDKAFGNEELIR 364
Query: 658 ILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDRYFEKVAR 837
I+TTRSK QL ATFN+Y D +GH INKDLK +++L +LR +I+C P+RYF KV R
Sbjct: 365 IITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKVLR 544
Query: 838 QAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLERAVAGDTSGDYESMLLALL 1017
AI LGTDE +L RV+ TRAE DL IKE Y+ R S LE AVA DTSGDYE +LL L+
Sbjct: 545 LAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRXRTSKALEHAVAADTSGDYEELLLTLI 724
Query: 1018 GQE 1026
G++
Sbjct: 725 GKQ 733
Score = 156 bits (336), Expect = 2e-037
Identities = 105/215 (48%), Positives = 120/215 (55%)
Frame = -1 / -2
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 726 PINVSSNSS*SPEVSAATACSNALLVLXRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 547
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 546 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 367
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXS 480
I S + LAS A V TSGPS R* LTS T+SLRKSP A
Sbjct: 366 MRMSSSLPKALSFIASCNCLASAFAKRVSTSGPSYR*ELTS*TSSLRKSP*V*EATSSSR 187
Query: 479 ERLNRS**ACLVAKICAEVRVQAISTSTRFPGFHF 375
+ L R * ACL E R IS S G HF
Sbjct: 186 DFL*RI*YACLTDHSSVEDRALEISRSDLLFGLHF 82
>gb|CO368127.1|CO368127 RTK1_38_F10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_38_F10_A029 5', mRNA sequence
Length = 857
Score = 347 bits (753), Expect = 7e-095
Identities = 142/237 (59%), Positives = 184/237 (77%)
Frame = +1 / +2
Query: 316 ILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFATRQAYHERFKRSLEEDI 495
+LW+LDP ERDA+L+ E+ +KW P NR L+EI+ R+S ++++ RQAYH R+K+SLEED+
Sbjct: 2 LLWSLDPPERDALLSYESIKKWSPNNRSLLEISSARSSTELWSVRQAYHIRYKKSLEEDV 181
Query: 496 AAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYSDDEIIRILTTRS 675
A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LHE I KA+ ++E+IRI+TTRS
Sbjct: 182 ASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIKDKAFGNEELIRIITTRS 361
Query: 676 KPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDRYFEKVARQAIAGL 855
K QL ATFN+Y D +GH INKDLK +++L +LR +I+C P+RYF KV R AI L
Sbjct: 362 KAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKVLRLAIDKL 541
Query: 856 GTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLERAVAGDTSGDYESMLLALLGQE 1026
GTDE +L RV+ TRAE DL IKE Y+KR S LE AVA DTSGDYE +LL L+G++
Sbjct: 542 GTDEEALMRVVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYEELLLTLIGKQ 712
Score = 157 bits (337), Expect = 2e-037
Identities = 105/215 (48%), Positives = 120/215 (55%)
Frame = -1 / -3
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 705 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 526
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 525 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 346
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXS 480
I S + LAS A V TSGPS R* LTS T+SLRKSP A
Sbjct: 345 MRMSSSLPKALSFIASCNCLASAFAKRVSTSGPSYR*ELTS*TSSLRKSP*V*EATSSSR 166
Query: 479 ERLNRS**ACLVAKICAEVRVQAISTSTRFPGFHF 375
+ L R * ACL E R IS S G HF
Sbjct: 165 DFL*RI*YACLTDHSSVEDRALEISRSDLLFGLHF 61
>gb|CO370469.1|CO370469 RTK1_68_C11.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_68_C11_A029 3', mRNA sequence
Length = 858
Score = 343 bits (743), Expect = 2e-093
Identities = 139/254 (54%), Positives = 185/254 (72%)
Frame = +1 / -2
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VPA P +D ++LRKAF+GWGTNE LII ILGH Y E+
Sbjct: 773 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 594
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
L+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++
Sbjct: 593 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 414
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LHE I
Sbjct: 413 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIK 234
Query: 625 HKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFS 804
KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH INKDLK +++L +L +I+C
Sbjct: 233 DKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESL*IVIKCIC 54
Query: 805 CPDRYFEKVARQAI 846
P+RYF KV R AI
Sbjct: 53 FPERYFAKVLRLAI 12
Score = 101 bits (215), Expect(2) = 3e-024
Identities = 73/161 (45%), Positives = 84/161 (52%)
Frame = -1 / +1
Query: 857 PSPAMACLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*G 678
PS ++A L TF+KYLSG+ H + S R SS F+SLLI P +SL**L VA +
Sbjct: 1 PSLSIANLKTFAKYLSGKQMHLITIHSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCA 180
Query: 677 LLLVVRXXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCA 498
LLLVV I S + LAS A V TSGPS R* LTS T+SLRKSP
Sbjct: 181 LLLVVIMRMSSSLPKALSFIASCNCLASAFAKRVSTSGPSYR*ELTS*TSSLRKSP*V*E 360
Query: 497 AMXXXSERLNRS**ACLVAKICAEVRVQAISTSTRFPGFHF 375
A + L R * ACL E R IS S G HF
Sbjct: 361 ATSSSRDFL*RI*YACLTDHSSVEDRALEISRSDLLFGLHF 483
Score = 34.5 bits (69), Expect(2) = 3e-024
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1 / +1
Query: 200 PRMEMMSASFVPHPWNALRSWSQSSATGGTVAGTLSVAI 84
P++ +++ SFVP P A S+SS G AGT+ V I
Sbjct: 658 PKISIINFSFVPQPSKAFLRRSESSTGDGAGAGTIIVDI 774
>gb|DR110698.1|DR110698 RTS1_12_A01.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_12_A01_A029 5', mRNA sequence
Length = 753
Score = 332 bits (719), Expect = 4e-090
Identities = 138/250 (55%), Positives = 179/250 (71%)
Frame = +1 / +2
Query: 175 EALIISILGHXXXXXXXXXXXXXXXXYGEELLRSITDEISGDFERAVILWTLDPAERDAV 354
E LII ILGH Y E+ L+ + E++ DFERA++LW+LDP +RDA+
Sbjct: 2 EKLIIEILGHRTAAQRRAIRQTYTQLYEEDFLKRLQSELTRDFERALLLWSLDPPQRDAL 181
Query: 355 LANEAARKWKPGNRVLVEIACTRTSAQIFATRQAYHERFKRSLEEDIAAHVTGDFRKLLV 534
LA E+ +KW P NR L+EI+ R+S +++A RQAYH R+K+SLEED+A+H GDFRKLLV
Sbjct: 182 LAYESIKKWSPNNRSLLEISSARSSTELWAVRQAYHIRYKKSLEEDVASHTHGDFRKLLV 361
Query: 535 PLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYSDDEIIRILTTRSKPQLIATFNHYND 714
LVS+YRY+GPEV+TRL +EAK LHE I KA+ ++E+IRI+TTRSK QL ATFN+Y D
Sbjct: 362 QLVSSYRYEGPEVDTRLGKAEAKQLHEAIKDKAFGNEELIRIITTRSKAQLTATFNYYKD 541
Query: 715 AFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDRYFEKVARQAIAGLGTDENSLTRVITT 894
+GH INKDLK +++L +LR I+C P+RYF KV R AI LGTDE +L RV+ T
Sbjct: 542 DYGHHINKDLKNGKPEDFLESLRIDIKCICFPERYFAKVLRLAIDKLGTDEEALMRVVVT 721
Query: 895 RAEVDLKLIK 924
RAE DL IK
Sbjct: 722 RAETDLSNIK 751
Score = 133 bits (286), Expect = 2e-030
Identities = 90/184 (48%), Positives = 102/184 (55%)
Frame = -1 / -1
Query: 926 SLISLRSTSARVVMTLVREFSSVPSPAMACLATFSKYLSGQLKHRMIARSVLRYSSWGSA 747
SLI LRS SARV T +R SSVPS +MA L TF+KYLSG+ H + RS R SS
Sbjct: 753 SLILLRSVSARVTTTRIRASSSVPSLSMANLKTFAKYLSGKQMHLISIRSDSRKSSGFPF 574
Query: 746 FRSLLIRWPNASL**LNVAIS*GLLLVVRXXXXXXXXXXXXXIFS*SSLASECANLVLTS 567
F+SLLI P +SL**L VA++ LLLVV I S + LAS V TS
Sbjct: 573 FKSLLI**P*SSL**LKVAVNCALLLVVIMRMSSSLPKALSFIASCNCLASAFPKRVSTS 394
Query: 566 GPS*R*VLTSGTNSLRKSPVTCAAMXXXSERLNRS**ACLVAKICAEVRVQAISTSTRFP 387
GPS R* LTS T+SLRKSP A + L R * ACL A E R IS S
Sbjct: 393 GPSYR*ELTS*TSSLRKSP*V*EATSSSRDFL*RI*YACLTAHSSVEDRALEISRSDLLF 214
Query: 386 GFHF 375
G HF
Sbjct: 213 GLHF 202
>dbj|BD236005.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 2132
Score = 314 bits (680), Expect(2) = 3e-087
Identities = 127/221 (57%), Positives = 165/221 (74%)
Frame = +1 / +2
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VPA P +D ++LRKAF+GWGTNE LII ILGH Y E+
Sbjct: 1373 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 1552
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
L+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++
Sbjct: 1553 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 1732
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA SEAK LHE I
Sbjct: 1733 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKSEAKQLHEAIK 1912
Query: 625 HKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLK 747
KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH INKDLK
Sbjct: 1913 DKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLK 2035
Score = 256 bits (554), Expect(4) = 9e-087
Identities = 102/165 (61%), Positives = 134/165 (81%)
Frame = +1 / +2
Query: 253 YGEELLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSA 432
Y E+ L+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S
Sbjct: 476 YEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSST 655
Query: 433 QIFATRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLH 612
++++ RQAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA SEAK LH
Sbjct: 656 ELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKSEAKQLH 835
Query: 613 EKIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLK 747
E I KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH INKDLK
Sbjct: 836 EAIKDKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLK 970
Score = 102 bits (217), Expect = 6e-021
Identities = 63/215 (29%), Positives = 104/215 (48%)
Frame = -3 / -2
Query: 747 LQILVDSVAKCIIVMIECSNQLRFAPSGEDSDDLIITVSLVMDLLMK*FGF*VCQPCVDL 568
LQ+LVD + I V+IE QL P +++ ++T SLV+ M F CQ +
Sbjct: 2035 LQVLVDMMTIVIFVIIESGIQLCLTPCSYYANEFLVTESLVLYSFM*LLSFRFCQASIHF 1856
Query: 567 WSIIAVSTYKWHQ*LAEVPSDVRSDVFLKRALEPLVISLPGREDLRGGARAGDLDEHTVP 388
W+ I+V TYK + LAEV +RS+VF +R L +I L R L + D + V
Sbjct: 1855 WTFISVRTYKLN*QLAEVSMSMRSNVFFQRFLVTYMICLSDRPQLS*RSSTRDFQK*PVI 1676
Query: 387 GLPLPRRLVGQHRVALRWVQRPQDHGPLEVAGDLVRDGAEELLAVGLGVSAADGAALRGV 208
PL R +G ++ +Q P++ L++ + +E+ + L V D +AL
Sbjct: 1675 WTPLLYRFIG*KCISFWGIQ*PEEQSSLKIPCEF*LQSLQEIFLIQLSVRLPDCSALCCG 1496
Query: 207 AVAEDGDDERLVRAPPLECFAQLVAVIGDGRNSGW 103
+V+++ ++ L+ AP + Q V G + W
Sbjct: 1495 SVSQNFYNQLLICAPAFKGLPQAFRVFNWGWSWRW 1391
Score = 94.1 bits (199), Expect(2) = 5e-023
Identities = 55/177 (31%), Positives = 87/177 (49%)
Frame = -3 / -2
Query: 747 LQILVDSVAKCIIVMIECSNQLRFAPSGEDSDDLIITVSLVMDLLMK*FGF*VCQPCVDL 568
LQ+LVD + I V+IE QL P +++ ++T SLV+ M F CQ +
Sbjct: 970 LQVLVDMMTIVIFVIIESGIQLCLTPCSYYANEFLVTESLVLYSFM*LLSFRFCQASIHF 791
Query: 567 WSIIAVSTYKWHQ*LAEVPSDVRSDVFLKRALEPLVISLPGREDLRGGARAGDLDEHTVP 388
W+ I+V TYK + LAEV +RS+VF +R L +I L R L + D + V
Sbjct: 790 WTFISVRTYKLN*QLAEVSMSMRSNVFFQRFLVTYMICLSDRPQLS*RSSTRDFQK*PVI 611
Query: 387 GLPLPRRLVGQHRVALRWVQRPQDHGPLEVAGDLVRDGAEELLAVGLGVSAADGAAL 217
PL R +G ++ +Q P++ L++ + +E+ + L V D +AL
Sbjct: 610 WTPLLYRFIG*KCISFWGIQ*PEEQSSLKIPCEF*LQSLQEIFLIQLSVRLPDCSAL 440
Score = 65.2 bits (136), Expect(4) = 9e-087
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGH 204
M+T+ VPA P +D ++LRKAF+GWGTNE LII ILGH
Sbjct: 306 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGH 425
Score = 39.6 bits (80), Expect(4) = 9e-087
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1 / +2
Query: 829 VARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLERAVAGDTSGDYESMLL 1008
+A ++I + SL + + R+ +L +++AY R LE VA T GD+ +L+
Sbjct: 1643 LAYESIKKWSPNNRSLLEISSARSSTELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLV 1822
Query: 1009 ALL 1017
L+
Sbjct: 1823 QLV 1831
Score = 34.5 bits (69), Expect(2) = 5e-023
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1 / -2
Query: 200 PRMEMMSASFVPHPWNALRSWSQSSATGGTVAGTLSVAI 84
P++ +++ SFVP P A S+SS G AGT+ V I
Sbjct: 421 PKISIINFSFVPQPSKAFLRRSESSTGDGAGAGTIIVDI 305
Score = 29.0 bits (57), Expect(2) = 3e-087
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1 / +3
Query: 760 DEYLRTLRAIIRCFSCPDRYFEK 828
+++L +LR +I+C P+RY K
Sbjct: 2049 EDFLESLRIVIKCICFPERYLCK 2117
Score = 29.0 bits (57), Expect(4) = 9e-087
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1 / +3
Query: 760 DEYLRTLRAIIRCFSCPDRYFEK 828
+++L +LR +I+C P+RY K
Sbjct: 984 EDFLESLRIVIKCICFPERYLCK 1052
>gb|DR021894.1|DR021894 STRS1_47_C06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_47_C06_A034 5', mRNA sequence
Length = 738
Score = 311 bits (673), Expect = 8e-084
Identities = 124/223 (55%), Positives = 167/223 (74%)
Frame = +1 / +3
Query: 127 DDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEELLRSITDEISGDFE 306
+D ++LRKAF+GWGTNE LII ILGH Y E+ L+ + E++ DFE
Sbjct: 6 EDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEEDFLKRLQSELTRDFE 185
Query: 307 RAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFATRQAYHERFKRSLE 486
RA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++ RQAYH R+K+SLE
Sbjct: 186 RALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWSVRQAYHIRYKKSLE 365
Query: 487 EDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYSDDEIIRILT 666
ED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LHE I KA+ ++E+IRI+T
Sbjct: 366 EDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIKDKAFGNEELIRIIT 545
Query: 667 TRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIR 795
TRSK QL ATFN+Y D +GH INKDLK +++L +LR +I+
Sbjct: 546 TRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIK 674
Score = 97.7 bits (207), Expect(2) = 1e-022
Identities = 59/195 (30%), Positives = 98/195 (50%)
Frame = -3 / -2
Query: 747 LQILVDSVAKCIIVMIECSNQLRFAPSGEDSDDLIITVSLVMDLLMK*FGF*VCQPCVDL 568
LQ+LVD + I V+IE QL P +++ ++T SLV+ M F CQ +
Sbjct: 626 LQVLVDMMTIVIFVIIESGIQLCLTPCSYYANEFLVTESLVLYSFM*LLSFSFCQARIHF 447
Query: 567 WSIIAVSTYKWHQ*LAEVPSDVRSDVFLKRALEPLVISLPGREDLRGGARAGDLDEHTVP 388
W+ I+V TYK + LAEV +RS+VF +R L +I L R L + D + V
Sbjct: 446 WTFISVRTYKLN*QLAEVSMSMRSNVFFQRFLVTYMICLSDRPQLS*RSSTRDFQK*PVI 267
Query: 387 GLPLPRRLVGQHRVALRWVQRPQDHGPLEVAGDLVRDGAEELLAVGLGVSAADGAALRGV 208
PL R +G ++ +Q P++ L++ + +E+ + L V D +AL
Sbjct: 266 WTPLLYRFIG*KCISFWGIQ*PEEQSSLKIPCEF*LQSLQEIFLIQLSVRLPDCSALCCG 87
Query: 207 AVAEDGDDERLVRAP 163
+V+++ ++ L+ AP
Sbjct: 86 SVSQNFYNQLLICAP 42
Score = 29.5 bits (58), Expect(2) = 1e-022
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1 / -2
Query: 857 PSPAMACLATFSKYLSGQLKH 795
PS ++A L TF+KYLSG+ H
Sbjct: 737 PSLSIANLKTFAKYLSGKQMH 675
>gb|DT634092.1|DT634092 EST1149023 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG217 3' end, mRNA sequence
Length = 752
Score = 311 bits (673), Expect = 8e-084
Identities = 125/221 (56%), Positives = 164/221 (74%)
Frame = +1 / +2
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ PA P +D ++LRKAF+GWGTNE LII ILGH Y E+
Sbjct: 77 MSTIIAPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 256
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
L+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++
Sbjct: 257 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 436
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LHE I
Sbjct: 437 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIK 616
Query: 625 HKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLK 747
KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH INKDLK
Sbjct: 617 DKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLK 739
>gb|DR387861.1|DR387861 RTHG1_24_D03.g2_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_24_D03_A029 5', mRNA sequence
Length = 682
Score = 310 bits (671), Expect = 1e-083
Identities = 125/219 (57%), Positives = 163/219 (74%)
Frame = +1 / +3
Query: 91 TLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEELL 270
T+ VPA P +D ++LRKAF+GWGTNE LII ILGH Y E+ L
Sbjct: 15 TIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEEDFL 194
Query: 271 RSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFATR 450
+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++ R
Sbjct: 195 KRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWSVR 374
Query: 451 QAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHK 630
QAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LHE I K
Sbjct: 375 QAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIKDK 554
Query: 631 AYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLK 747
A+ ++E+IRI+TTRSK QL ATFN+Y D +GH INKDLK
Sbjct: 555 AFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLK 671
>gb|DR688160.1|DR688160 EST1078244 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC193 3' end, mRNA sequence
Length = 797
Score = 304 bits (658), Expect = 9e-082
Identities = 125/242 (51%), Positives = 168/242 (69%)
Frame = +1 / +2
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VP +P ++D ++LRKAF+GWGTNE II ILGH Y E+
Sbjct: 71 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEED 250
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
LL+ + E+S DFE+AV LW LDPAERDAV+++ A +KW N L+EI+ R+SA++
Sbjct: 251 LLKRLESELSSDFEKAVFLWVLDPAERDAVISHGAIKKWNAKNISLLEISSARSSAELLM 430
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+AAH +G+FRKLLV LVS+YRY+GPEV+ LA EAK L E I
Sbjct: 431 VRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKLSESIT 610
Query: 625 HKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFS 804
K + +E+IRI++TRSK QL ATFN Y D +GH INKDLK+ +++ +R +I+C
Sbjct: 611 SKKDNYEELIRIISTRSKAQLNATFNCYKDVYGHHINKDLKSQAPEDFQDAVRVVIKCIC 790
Query: 805 CP 810
CP
Sbjct: 791 CP 796
Score = 71.6 bits (150), Expect(3) = 1e-021
Identities = 46/108 (42%), Positives = 51/108 (47%)
Frame = -1 / -3
Query: 608 SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXSERLNRS**ACLVAKICA 429
S AS A + TSGPS R LTS T++LRK P+ CAA + L R * ACL A
Sbjct: 594 SFFAS*LAKCISTSGPSYRYELTSATSNLRKFPLVCAATSSSRDFLYRI*YACLTINSSA 415
Query: 428 EVRVQAISTSTRFPGFHFRXXXXXXXXXXXXXXSVHRITALSKSPEIS 285
E R IS S F FHF S R TA SKS E S
Sbjct: 414 EDRALEISKSDIFFAFHFFIAP*DMTASRSAGSSTQRNTAFSKSLESS 271
Score = 37.3 bits (75), Expect(3) = 1e-021
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = -1 / -3
Query: 809 GQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVV 663
GQ H + R+ SS F+SLLI P SL* LNVA +* LLLV+
Sbjct: 795 GQQIHLITTRTASWKSSGA*LFKSLLI**PYTSL*QLNVAFN*ALLLVL 649
Score = 32.7 bits (65), Expect(3) = 1e-021
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -1 / -3
Query: 200 PRMEMMSASFVPHPWNALRSWSQSSATGGTVAGTLSVAI 84
P + M+ SFVPHP A S+SS G GT+ V I
Sbjct: 186 PNICMIDFSFVPHPSKAFLRRSESSDGVGIGTGTIIVDI 70
>gb|DR687288.1|DR687288 EST1077369 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABQ20 3' end, mRNA sequence
Length = 716
Score = 299 bits (647), Expect = 3e-080
Identities = 120/216 (55%), Positives = 159/216 (73%)
Frame = +1 / +3
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ PA P +D ++LRKAF+GWGTNE LII ILGH Y E+
Sbjct: 69 MSTIIAPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 248
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
L+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++
Sbjct: 249 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 428
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LHE I
Sbjct: 429 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIK 608
Query: 625 HKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRI 732
KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH I
Sbjct: 609 DKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHI 716
>gb|CF393636.1|CF393636 RTDR3_15_C10.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_15_C10_A022 5', mRNA
sequence
Length = 670
Score = 298 bits (646), Expect = 4e-080
Identities = 120/216 (55%), Positives = 160/216 (74%)
Frame = +1 / +2
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VPA P +D ++LRKAF+GWGTNE LII ILGH Y E+
Sbjct: 23 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 202
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
L+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++
Sbjct: 203 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 382
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LHE I
Sbjct: 383 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIK 562
Query: 625 HKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRI 732
KA+ ++E+IRI+TTRSK QL ATF++Y D +GH I
Sbjct: 563 DKAFGNEELIRIITTRSKAQLNATFHYYKDDYGHHI 670
>gb|DR110618.1|DR110618 RTS1_12_A01.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_12_A01_A029 3', mRNA sequence
Length = 835
Score = 297 bits (642), Expect = 1e-079
Identities = 123/202 (60%), Positives = 157/202 (77%)
Frame = +1 / +3
Query: 421 RTSAQIFATRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEA 600
R+S ++++ RQAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EA
Sbjct: 9 RSSTELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEA 188
Query: 601 KLLHEKIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTL 780
K LHE I KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH INKDLK +++L +L
Sbjct: 189 KQLHEAIKDKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESL 368
Query: 781 RAIIRCFSCPDRYFEKVARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLE 960
R +I+C P+RYF KV R AI LGTDE +L RV+ TRAE DL IKE Y+KR S LE
Sbjct: 369 RIVIKCICFPERYFAKVLRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKALE 548
Query: 961 RAVAGDTSGDYESMLLALLGQE 1026
AVA DTSGDYE +LL L+G++
Sbjct: 549 HAVAADTSGDYEELLLTLIGKQ 614
Score = 147 bits (316), Expect = 1e-034
Identities = 99/200 (49%), Positives = 114/200 (57%)
Frame = -1 / -1
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 607 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 428
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 427 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 248
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXS 480
I S + LAS A V TSGPS R* LTS T+SLRKSP A
Sbjct: 247 MRMSSSLPKALSFIASCNCLASAFAKRVSTSGPSYR*ELTS*TSSLRKSP*V*EATSSSR 68
Query: 479 ERLNRS**ACLVAKICAEVR 420
+ L R * ACL E R
Sbjct: 67 DFL*RI*YACLTDHSSVEDR 8
>gb|DR117549.1|DR117549 RTMG1_7_D09.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_D09_A029 5', mRNA sequence
Length = 898
Score = 292 bits (632), Expect = 4e-078
Identities = 121/198 (61%), Positives = 154/198 (77%)
Frame = +1 / -1
Query: 433 QIFATRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLH 612
++++ RQAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LH
Sbjct: 898 ELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLH 719
Query: 613 EKIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAII 792
E I KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH INKDLK +++L +LR +I
Sbjct: 718 EAIKDKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVI 539
Query: 793 RCFSCPDRYFEKVARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLERAVA 972
+C P+RYF KV R AI LGTDE +L RV+ TRAE DL IKE Y+KR S LE AVA
Sbjct: 538 KCICFPERYFAKVLRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKALEHAVA 359
Query: 973 GDTSGDYESMLLALLGQE 1026
DTSGDYE +LL L+G++
Sbjct: 358 ADTSGDYEELLLTLIGKQ 305
Score = 147 bits (315), Expect = 2e-034
Identities = 97/191 (50%), Positives = 112/191 (58%)
Frame = -1 / +3
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 312 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 491
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 492 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 671
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXS 480
I S + LAS A V TSGPS R* LTS T+SLRKSP A
Sbjct: 672 MRMSSSLPKALSFIASCNCLASAFAKRVSTSGPSYR*ELTS*TSSLRKSP*V*EATSSSR 851
Query: 479 ERLNRS**ACL 447
+ L R * ACL
Sbjct: 852 DFL*RI*YACL 884
>gb|DR118532.1|DR118532 RTMG1_17_C11.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_C11_A029 5', mRNA sequence
Length = 842
Score = 292 bits (632), Expect = 4e-078
Identities = 121/198 (61%), Positives = 154/198 (77%)
Frame = +1 / -1
Query: 433 QIFATRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLH 612
++++ RQAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LH
Sbjct: 842 ELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLH 663
Query: 613 EKIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAII 792
E I KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH INKDLK +++L +LR +I
Sbjct: 662 EAIKDKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVI 483
Query: 793 RCFSCPDRYFEKVARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLERAVA 972
+C P+RYF KV R AI LGTDE +L RV+ TRAE DL IKE Y+KR S LE AVA
Sbjct: 482 KCICFPERYFAKVLRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKALEHAVA 303
Query: 973 GDTSGDYESMLLALLGQE 1026
DTSGDYE +LL L+G++
Sbjct: 302 ADTSGDYEELLLTLIGKQ 249
Score = 147 bits (315), Expect = 2e-034
Identities = 97/191 (50%), Positives = 112/191 (58%)
Frame = -1 / +1
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 256 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 435
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 436 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 615
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXS 480
I S + LAS A V TSGPS R* LTS T+SLRKSP A
Sbjct: 616 MRMSSSLPKALSFIASCNCLASAFAKRVSTSGPSYR*ELTS*TSSLRKSP*V*EATSSSR 795
Query: 479 ERLNRS**ACL 447
+ L R * ACL
Sbjct: 796 DFL*RI*YACL 828
>gb|DR693927.1|DR693927 EST1084017 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE595 3' end, mRNA sequence
Length = 812
Score = 186 bits (401), Expect(2) = 9e-077
Identities = 76/138 (55%), Positives = 103/138 (74%)
Frame = +1 / +2
Query: 400 LVEIACTRTSAQIFATRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNT 579
L+EI+ R+SA++ RQAYH R+K+SLEED+AAH +G+FRKLLV LVS+YRY+GPEV+
Sbjct: 389 LLEISSARSSAELLMVRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDM 568
Query: 580 RLAHSEAKLLHEKIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQ 759
LA EAK L E I K + +E+IRI++TRSK QL ATFN Y D +GH INKDLK+
Sbjct: 569 HLASYEAKKLSESITSKKDNYEELIRIISTRSKAQLNATFNCYKDVYGHHINKDLKSQAP 748
Query: 760 DEYLRTLRAIIRCFSCPD 813
+++ +R +I+C CP+
Sbjct: 749 EDFQDAVRVVIKCICCPE 802
Score = 122 bits (260), Expect(2) = 9e-077
Identities = 49/112 (43%), Positives = 67/112 (59%)
Frame = +1 / +1
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VP +P ++D ++LRKAF+GWGTNE II ILGH Y E+
Sbjct: 76 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEED 255
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACT 420
LL+ + E+S DFE+AV W LDPAERDAV+++ A +KW N C+
Sbjct: 256 LLKRLESELSSDFEKAVFPWVLDPAERDAVISHGAIKKWNAKNIAFRNFQCS 411
Score = 57.0 bits (118), Expect(4) = 9e-021
Identities = 33/70 (47%), Positives = 38/70 (54%)
Frame = -1 / -3
Query: 608 SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXSERLNRS**ACLVAKICA 429
S AS A + TSGPS R LTS T++LRK P+ CAA + L R * ACL A
Sbjct: 597 SFFAS*LAKCISTSGPSYRYELTSATSNLRKFPLVCAATSSSRDFLYRI*YACLTINSSA 418
Query: 428 EVRVQAISTS 399
E R IS S
Sbjct: 417 EDRALEISKS 388
Score = 39.1 bits (79), Expect(4) = 9e-021
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = -1 / -3
Query: 812 SGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVV 663
SGQ H + R+ SS F+SLLI P SL* LNVA +* LLLV+
Sbjct: 801 SGQQIHLITTRTASWKSSGA*LFKSLLI**PYTSL*QLNVAFN*ALLLVL 652
Score = 32.7 bits (65), Expect(4) = 9e-021
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -1 / -1
Query: 200 PRMEMMSASFVPHPWNALRSWSQSSATGGTVAGTLSVAI 84
P + M+ SFVPHP A S+SS G GT+ V I
Sbjct: 191 PNICMIDFSFVPHPSKAFLRRSESSDGVGIGTGTIIVDI 75
Score = 26.7 bits (52), Expect(4) = 9e-021
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = -3 / -3
Query: 420 RAGDLDEHTVPGLPLPRRLVGQHRVALRWVQRPQDHGPLEVAGDLVRDGAEELLAVGLGV 241
RA ++ + + +PL + R+ W+ P+++ L+V L +E+L V L +
Sbjct: 411 RALEISKSDILCIPLLYCSMRYDRITFSWI*YPREYSFLKVT*KLRF*SLQEILFVQLKI 232
Query: 240 SAADGAAL 217
+ D AL
Sbjct: 231 TLTDYFAL 208
>gb|DR071753.1|DR071753 RTDK1_21_H06.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_21_H06_A029 5', mRNA sequence
Length = 712
Score = 286 bits (618), Expect = 3e-076
Identities = 120/222 (54%), Positives = 157/222 (70%)
Frame = +1 / +1
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VP +P ++D ++LRKAF+GWGTNE II ILGH Y E+
Sbjct: 43 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEED 222
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
LL+ + E+S DFE+AV LW LDPAERDAV+++ A +KW N L+EI+ R+SA++
Sbjct: 223 LLKRLESELSSDFEKAVFLWVLDPAERDAVISHGAIKKWNAKNISLLEISSARSSAELLM 402
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+AAH +G+FRKLLV LVS+YRY+GPEV+ LA EAK L E I
Sbjct: 403 VRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKLSESIT 582
Query: 625 HKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKA 750
K + +E+IRI++TRSK QL ATFN Y D +GH INKDLK+
Sbjct: 583 SKKDNYEELIRIISTRSKAQLNATFNCYKDVYGHHINKDLKS 708
>gb|DR682440.1|DR682440 EST1072515 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA986, mRNA sequence
Length = 827
Score = 281 bits (607), Expect = 1e-074
Identities = 119/209 (56%), Positives = 157/209 (75%)
Frame = +1 / -2
Query: 400 LVEIACTRTSAQIFATRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNT 579
L+EI+ R+SA++ RQAYH R+K+SLEED+A H++G+FRKLLV LVS+YRY+GPEV+
Sbjct: 826 LLEISSARSSAELLMVRQAYHIRYKKSLEEDVAEHISGNFRKLLVALVSSYRYEGPEVDM 647
Query: 580 RLAHSEAKLLHEKIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQ 759
RLA SEAK L+E I K + +E+IRI++TRSK QL ATFN Y DA+GH INK LK
Sbjct: 646 RLASSEAKKLNESITSKKDNYEELIRIISTRSKAQLNATFNCYKDAYGHHINKALKTQVP 467
Query: 760 DEYLRTLRAIIRCFSCPDRYFEKVARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQK 939
+++ +R +I C +++F KV R AI GL TDE++LTRV+ TRAEVD+K IKEAY K
Sbjct: 466 EDFQDAVRVLINCICSTEKHFSKVLRLAIGGLRTDEDALTRVVVTRAEVDMKHIKEAYAK 287
Query: 940 RNSVPLERAVAGDTSGDYESMLLALLGQE 1026
R S LE+A+A DTSGDY LL L+G++
Sbjct: 286 RTSKTLEQAIASDTSGDYREFLLTLIGKD 200
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 56/121 (46%), Positives = 65/121 (53%)
Frame = -1 / +3
Query: 1025 SCPRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPA 846
S P + *SPEVS A A S L YASLI STSARV T V SSV SP
Sbjct: 201 SLPINVSKNSR*SPEVSDAIACSKVLLVRLAYASLICFMSTSARVTTTRVSASSSVLSPP 380
Query: 845 MACLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLV 666
+A TF K S + + R+ SS F++LLI P ASL* LNVA +* LLLV
Sbjct: 381 IAKRKTFEKCFSVEQIQLIKTRTASWKSSGT*VFKALLI**PYASL*QLNVAFN*ALLLV 560
Query: 665 V 663
+
Sbjct: 561 L 563
Score = 58.8 bits (122), Expect(2) = 1e-025
Identities = 33/70 (47%), Positives = 39/70 (55%)
Frame = -1 / +3
Query: 608 SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXSERLNRS**ACLVAKICA 429
S ASE A + TSGPS R LTS T++LRK P+ C+A + L R * ACL A
Sbjct: 618 SFFASELARRISTSGPSYRYELTSATSNLRKFPLICSATSSSRDFLYRI*YACLTINSSA 797
Query: 428 EVRVQAISTS 399
E R IS S
Sbjct: 798 EDRALEISKS 827
>gb|DR682441.1|DR682441 EST1072516 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA986 3' end, mRNA sequence
Length = 771
Score = 280 bits (606), Expect = 1e-074
Identities = 118/233 (50%), Positives = 161/233 (69%)
Frame = +1 / +2
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VP + P A+D ++LRKA +GWGT+E II ILGH Y E+
Sbjct: 71 MSTITVPVSTPTPAEDSERLRKAVEGWGTDEKSIIQILGHRTAAQRKFIRQIYFQLYKED 250
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
LL+ + E+S FE+AV W LDPAERDAV+ ++A +KW + L+EI+ R+SA++
Sbjct: 251 LLKRLESELSSHFEKAVFRWVLDPAERDAVICHDAIKKWNAKDISLLEISSARSSAELLM 430
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+A H++G+FRKLLV LVS+YRY+GPEV+ RLA SEAK L+E I
Sbjct: 431 VRQAYHIRYKKSLEEDVAEHISGNFRKLLVALVSSYRYEGPEVDMRLASSEAKKLNESIT 610
Query: 625 HKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLR 783
K + +E+IRI++TRSK QL ATFN Y DA+GH INK LK +++ +R
Sbjct: 611 SKKDNYEELIRIISTRSKAQLNATFNCYKDAYGHHINKALKTQVPEDFQDAVR 769
>gb|DT631114.1|DT631114 EST1146045 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF513 3' end, mRNA sequence
Length = 763
Score = 279 bits (604), Expect = 3e-074
Identities = 117/228 (51%), Positives = 159/228 (69%)
Frame = +1 / +1
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VP + P A+D ++LRKA +GWGT+E II ILGH Y E+
Sbjct: 79 MSTITVPVSTPTPAEDSERLRKAVEGWGTDEKSIIQILGHRTAAQRKFIRQIYFQLYKED 258
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
LL+ + E+S FE+AV W LDPAERDAV+ ++A +KW + L+EI+ R+SA++
Sbjct: 259 LLKRLESELSSHFEKAVFRWVLDPAERDAVICHDAIKKWNAKDISLLEISSARSSAELLM 438
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+A H++G+FRKLLV LVS+YRY+GPEV+ RLA SEAK L+E I
Sbjct: 439 VRQAYHIRYKKSLEEDVAEHISGNFRKLLVALVSSYRYEGPEVDMRLASSEAKKLNESIT 618
Query: 625 HKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEY 768
K + +E+IRI++TRSK QL ATFN Y DA+GH INK LK +++
Sbjct: 619 SKKDNYEELIRIISTRSKAQLNATFNCYKDAYGHHINKALKTQVPEDF 762
>gb|DR102479.1|DR102479 STRR1_81_A06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_81_A06_A033 5', mRNA sequence
Length = 877
Score = 279 bits (603), Expect = 4e-074
Identities = 116/202 (57%), Positives = 153/202 (75%)
Frame = +1 / +1
Query: 421 RTSAQIFATRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEA 600
R+SA++ RQAYH R+K+SLEED+AAH +G+FRKLLV LVS+YRY+GPEV+ LA EA
Sbjct: 4 RSSAELLMARQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEA 183
Query: 601 KLLHEKIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTL 780
K L E I K + +E+IRI++TRSK QL ATFN Y D +GH INKDLK+ +++ +
Sbjct: 184 KKLSESITSKNDNYEELIRIISTRSKAQLNATFNCYKDVYGHHINKDLKSQAPEDFQDAV 363
Query: 781 RAIIRCFSCPDRYFEKVARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLE 960
R +I+C CP+++F KV R AI LGTDE++LTRV+ TRAEVD+K IKEAY KR S LE
Sbjct: 364 RVVIKCICCPEKHFTKVLRLAIEKLGTDEDALTRVVVTRAEVDMKHIKEAYAKRTSKTLE 543
Query: 961 RAVAGDTSGDYESMLLALLGQE 1026
A+A +TSGDY+ LL L+G++
Sbjct: 544 HAIASETSGDYQDFLLTLIGKD 609
Score = 90.9 bits (192), Expect(2) = 1e-027
Identities = 60/121 (49%), Positives = 68/121 (56%)
Frame = -1 / -3
Query: 1025 SCPRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPA 846
S P + *SPEVS A A S L L YASLI STSARV T V SSVPS +
Sbjct: 608 SLPINVSKKSW*SPEVSDAIACSKVLLVLLAYASLICFMSTSARVTTTRVSASSSVPSFS 429
Query: 845 MACLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLV 666
+A TF K SGQ H + R+ SS F+SLLI P SL* LNVA +* LLLV
Sbjct: 428 IAKRKTFVKCFSGQQIHLITTRTASWKSSGA*LFKSLLI**PYTSL*QLNVAFN*ALLLV 249
Query: 665 V 663
+
Sbjct: 248 L 246
Score = 53.3 bits (110), Expect(2) = 1e-027
Identities = 30/63 (47%), Positives = 35/63 (55%)
Frame = -1 / -3
Query: 608 SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXSERLNRS**ACLVAKICA 429
S AS A + TSGPS R LTS T++LRK P+ CAA + L R * ACL A
Sbjct: 191 SFFAS*LAKCISTSGPSYRYELTSATSNLRKFPLVCAATSSSRDFLYRI*YACLAINSSA 12
Query: 428 EVR 420
E R
Sbjct: 11 EDR 3
>gb|DT638522.1|DT638522 EST1153453 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHG20 3' end, mRNA sequence
Length = 824
Score = 272 bits (589), Expect = 3e-072
Identities = 115/220 (52%), Positives = 153/220 (69%)
Frame = +1 / +3
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VP P A+D ++LRKA +GWGT+E II ILGH Y E+
Sbjct: 165 MSTITVPVPTPTPAEDSERLRKAVEGWGTDEKSIIQILGHRTAAQRKFIRQIYFQLYKED 344
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
LL+ + E+S FE+AV W LDPAERDAV+ ++ +KW + L+EI+ R+SA++
Sbjct: 345 LLKRLESELSSHFEKAVFRWVLDPAERDAVICHDTIKKWNAKDISLLEISSARSSAELLM 524
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+A H++G+FRKLLV LVS+YRY+GPEV+ RLA SEAK L+E I
Sbjct: 525 VRQAYHIRYKKSLEEDVAEHISGNFRKLLVALVSSYRYEGPEVDMRLASSEAKKLNESIT 704
Query: 625 HKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDL 744
K + +E+IRI++TRSK QL ATFN Y DA+GH INK L
Sbjct: 705 SKKDNYEELIRIISTRSKAQLNATFNCYKDAYGHHINKAL 824
>gb|DT638197.1|DT638197 EST1153128 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHC20 3' end, mRNA sequence
Length = 814
Score = 169 bits (364), Expect(2) = 1e-071
Identities = 71/123 (57%), Positives = 94/123 (76%)
Frame = +1 / +1
Query: 400 LVEIACTRTSAQIFATRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNT 579
L+EI+ R+SA++ RQAYH R+K+SLEED+AAH +G+FRKLLV LVS+YRY+GPEV+
Sbjct: 397 LLEISSARSSAELLMVRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDM 576
Query: 580 RLAHSEAKLLHEKIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQ 759
LA EAK L E I K + +E+IRI++TRSK QL ATFN Y D +GH INKDLK+
Sbjct: 577 HLASYEAKKLSESITSKKDNYEELIRIISTRSKAQLNATFNCYKDVYGHHINKDLKSQAP 756
Query: 760 DEY 768
+++
Sbjct: 757 EDF 765
Score = 122 bits (260), Expect(2) = 1e-071
Identities = 49/112 (43%), Positives = 67/112 (59%)
Frame = +1 / +3
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VP +P ++D ++LRKAF+GWGTNE II ILGH Y E+
Sbjct: 84 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEED 263
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACT 420
LL+ + E+S DFE+AV W LDPAERDAV+++ A +KW N C+
Sbjct: 264 LLKRLESELSSDFEKAVFPWVLDPAERDAVISHGAIKKWNAKNIAFRNFQCS 419
>gb|DR691737.1|DR691737 EST1081824 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADC32 3' end, mRNA sequence
Length = 725
Score = 264 bits (570), Expect = 1e-069
Identities = 106/196 (54%), Positives = 142/196 (72%)
Frame = +1 / +3
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VPA P +D ++LRKAF+GWGTNE LII ILGH Y E+
Sbjct: 135 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 314
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
L+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++
Sbjct: 315 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 494
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+A H GDFRKLLV LVS+YRY+GPE +TRLA +EAK HE I
Sbjct: 495 VRQAYHIRYKKSLEEDVAPHTHGDFRKLLVQLVSSYRYEGPEADTRLAKAEAKQSHEAIK 674
Query: 625 HKAYSDDEIIRILTTR 672
KA+ ++E+IRI+TTR
Sbjct: 675 DKAFGNEELIRIITTR 722
>gb|DR071668.1|DR071668 RTDK1_21_H06.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_21_H06_A029 3', mRNA sequence
Length = 712
Score = 262 bits (566), Expect = 4e-069
Identities = 109/189 (57%), Positives = 143/189 (75%)
Frame = +1 / +1
Query: 460 HERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYS 639
H R+K+SLEED+AAH +G+FRKLLV LVS+YRY+GPEV+ LA EAK L E I K +
Sbjct: 1 HIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKLSESITSKKDN 180
Query: 640 DDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDRY 819
+E+IRI++TRSK QL ATFN Y D +GH INKDLK+ +++ +R +I+C CP+++
Sbjct: 181 YEELIRIISTRSKAQLNATFNCYKDVYGHHINKDLKSQAPEDFQDAVRVVIKCICCPEKH 360
Query: 820 FEKVARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLERAVAGDTSGDYES 999
F KV R AI LGTDE++LTRV+ TRAEVD+K IKEAY KR S LE A+A +TSGDY+
Sbjct: 361 FTKVLRLAIEKLGTDEDALTRVVVTRAEVDMKHIKEAYAKRTSKTLEHAIASETSGDYQD 540
Query: 1000 MLLALLGQE 1026
LL L+G++
Sbjct: 541 FLLTLIGKD 567
Score = 90.9 bits (192), Expect(2) = 5e-025
Identities = 60/121 (49%), Positives = 68/121 (56%)
Frame = -1 / -3
Query: 1025 SCPRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPA 846
S P + *SPEVS A A S L L YASLI STSARV T V SSVPS +
Sbjct: 566 SLPINVSKKSW*SPEVSDAIACSKVLLVLLAYASLICFMSTSARVTTTRVSASSSVPSFS 387
Query: 845 MACLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLV 666
+A TF K SGQ H + R+ SS F+SLLI P SL* LNVA +* LLLV
Sbjct: 386 IAKRKTFVKCFSGQQIHLITTRTASWKSSGA*LFKSLLI**PYTSL*QLNVAFN*ALLLV 207
Query: 665 V 663
+
Sbjct: 206 L 204
Score = 44.6 bits (91), Expect(2) = 5e-025
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = -1 / -3
Query: 608 SSLASECANLVLTSGPS*R*VLTSGTNSLRKSPVTCAAMXXXSERLNR 465
S AS A + TSGPS R LTS T++LRK P+ CAA + L R
Sbjct: 149 SFFAS*LAKCISTSGPSYRYELTSATSNLRKFPLVCAATSSSRDFLYR 6
>gb|DR694455.1|DR694455 EST1084547 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEC67 3' end, mRNA sequence
Length = 837
Score = 237 bits (512), Expect(2) = 8e-069
Identities = 99/198 (50%), Positives = 137/198 (69%)
Frame = +1 / +1
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VP P A+D ++LRKA +GWGT+E II ILGH Y E+
Sbjct: 157 MSTITVPVPTPTPAEDSERLRKAVEGWGTDEKSIIQILGHRTAAQRKFIRQIYFQLYKED 336
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
LL+ + E+S FE+AV W LDPAERDAV+ ++ +KW + L+EI+ R+SA++
Sbjct: 337 LLKRLESELSSHFEKAVFRWVLDPAERDAVICHDTIKKWNAKDISLLEISSARSSAELLM 516
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+A H++G+FRKLLV LVS+YRY+GPEV+ RLA SEAK L+E I
Sbjct: 517 VRQAYHIRYKKSLEEDVAEHISGNFRKLLVALVSSYRYEGPEVDMRLASSEAKKLNESIT 696
Query: 625 HKAYSDDEIIRILTTRSK 678
K + +E+IRI++TR+K
Sbjct: 697 SKKDNYEELIRIISTRAK 750
Score = 44.6 bits (91), Expect(2) = 8e-069
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1 / +3
Query: 670 RSKPQLIATFNHYNDAFGHRINKDLKADPQDE 765
+SK QL ATFN Y DA+GH INK LK ++
Sbjct: 741 KSKAQLNATFNCYKDAYGHHINKALKTQVPED 836
>gb|CF390271.1|CF390271 RTDR2_18_E10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_18_E10_A021 5', mRNA
sequence
Length = 685
Score = 251 bits (542), Expect = 9e-066
Identities = 101/184 (54%), Positives = 134/184 (72%)
Frame = +1 / +3
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VPA P +D ++LRKAF+GWGTNE LII ILGH Y E+
Sbjct: 129 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 308
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
L+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++
Sbjct: 309 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 488
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIH 624
RQAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY+GPEV+TRLA +EAK LHE I
Sbjct: 489 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIK 668
Query: 625 HKAY 636
KA+
Sbjct: 669 DKAF 680
>gb|DR021006.1|DR021006 STRS1_40_E12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_40_E12_A034 5', mRNA sequence
Length = 727
Score = 249 bits (539), Expect = 2e-065
Identities = 106/172 (61%), Positives = 131/172 (76%)
Frame = +1 / +2
Query: 511 GDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYSDDEIIRILTTRSKPQLI 690
GDFRKLLV LVS+YRY+GPEV+T LA +EAK LHE I KA+ ++E+IRI+TTRSK QL
Sbjct: 23 GDFRKLLVQLVSSYRYEGPEVDTCLAKAEAKQLHEAIKDKAFGNEELIRIITTRSKAQLN 202
Query: 691 ATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDRYFEKVARQAIAGLGTDEN 870
ATFN+Y D +GH INKDLK +++L +LR +I+C P+RYF KV R AI LGTDE
Sbjct: 203 ATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKVLRLAIDKLGTDEE 382
Query: 871 SLTRVITTRAEVDLKLIKEAYQKRNSVPLERAVAGDTSGDYESMLLALLGQE 1026
+L RV+ TRAE DL IKE Y+KR S LE AVA DTSGDYE +LL L+G++
Sbjct: 383 ALMRVVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYEELLLTLIGKQ 538
Score = 142 bits (305), Expect = 5e-033
Identities = 90/170 (52%), Positives = 104/170 (61%)
Frame = -1 / -2
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 531 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 352
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 351 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 172
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGTNSLRKSP 510
I S + LAS A V TSGPS R* LTS T+SLRKSP
Sbjct: 171 MRMSSSLPKALSFIASCNCLASAFAKHVSTSGPSYR*ELTS*TSSLRKSP 22
>gb|CR354730.1|CR354730 CR354730 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 125F06, mRNA sequence
Length = 702
Score = 247 bits (533), Expect = 2e-064
Identities = 99/179 (55%), Positives = 132/179 (73%)
Frame = +1 / +1
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VPA P +D ++LRKAF+GWGTNE LII ILGH Y E+
Sbjct: 163 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 342
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
L+ + E++ DFERA++LW+LDP ERDA+LA+E+ +KW P NR L+EI+ R+S ++++
Sbjct: 343 FLKRLQSELTRDFERALLLWSLDPPERDALLAHESIKKWSPNNRSLLEISSARSSTELWS 522
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKI 621
RQAYH R+K+SLEED+A+H GDFRKLLV LVS++RY+GPEV+TRLA SEAK LHE I
Sbjct: 523 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSHRYEGPEVDTRLAKSEAKQLHEAI 699
>gb|DR089645.1|DR089645 RTAL1_10_B01.b1_A029 Roots plus added aluminum Pinus taeda cDNA clone
RTAL1_10_B01_A029 3', mRNA sequence
Length = 779
Score = 245 bits (529), Expect = 6e-064
Identities = 104/169 (61%), Positives = 129/169 (76%)
Frame = +1 / +3
Query: 520 RKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYSDDEIIRILTTRSKPQLIATF 699
RKLLV LVS+YRY+GPEV+TRLA +EAK LHE I KA+ ++E+IRI+TTRSK QL ATF
Sbjct: 3 RKLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIKDKAFGNEELIRIITTRSKAQLNATF 182
Query: 700 NHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDRYFEKVARQAIAGLGTDENSLT 879
N+Y D +GH INKDLK +++L +LR +I+C P+RYF KV R AI LGTDE +L
Sbjct: 183 NYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKVLRLAIDKLGTDEEALM 362
Query: 880 RVITTRAEVDLKLIKEAYQKRNSVPLERAVAGDTSGDYESMLLALLGQE 1026
RV+ TRAE DL IKE Y+KR S LE AVA DTSGDYE +LL L+G++
Sbjct: 363 RVVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYEELLLTLIGKQ 509
Score = 135 bits (290), Expect = 5e-031
Identities = 87/167 (52%), Positives = 101/167 (60%)
Frame = -1 / -2
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 502 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 323
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 322 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 143
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGTNSLR 519
I S + LAS A V TSGPS R* LTS T+SLR
Sbjct: 142 MRMSSSLPKALSFIASCNCLASAFAKRVSTSGPSYR*ELTS*TSSLR 2
>gb|CO368041.1|CO368041 RTK1_38_F10.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_38_F10_A029 3', mRNA sequence
Length = 854
Score = 243 bits (524), Expect = 3e-063
Identities = 103/168 (61%), Positives = 128/168 (76%)
Frame = +1 / +3
Query: 523 KLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYSDDEIIRILTTRSKPQLIATFN 702
KLLV LVS+YRY+GPEV+TRLA +EAK LHE I KA+ ++E+IRI+TTRSK QL ATFN
Sbjct: 3 KLLVQLVSSYRYEGPEVDTRLAKAEAKQLHEAIKDKAFGNEELIRIITTRSKAQLNATFN 182
Query: 703 HYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDRYFEKVARQAIAGLGTDENSLTR 882
+Y D +GH INKDLK +++L +LR +I+C P+RYF KV R AI LGTDE +L R
Sbjct: 183 YYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKVLRLAIDKLGTDEEALMR 362
Query: 883 VITTRAEVDLKLIKEAYQKRNSVPLERAVAGDTSGDYESMLLALLGQE 1026
V+ TRAE DL IKE Y+KR S LE AVA DTSGDYE +LL L+G++
Sbjct: 363 VVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYEELLLTLIGKQ 506
Score = 133 bits (285), Expect = 3e-030
Identities = 86/166 (51%), Positives = 100/166 (60%)
Frame = -1 / -2
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 499 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 320
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 319 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 140
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGTNSL 522
I S + LAS A V TSGPS R* LTS T+SL
Sbjct: 139 MRMSSSLPKALSFIASCNCLASAFAKRVSTSGPSYR*ELTS*TSSL 2
>gb|CO370544.1|CO370544 RTK1_68_C11.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_68_C11_A029 5', mRNA sequence
Length = 809
Score = 232 bits (502), Expect = 3e-060
Identities = 99/165 (60%), Positives = 124/165 (75%)
Frame = +1 / -2
Query: 532 VPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYSDDEIIRILTTRSKPQLIATFNHYN 711
V LVS+YRY+GPEV+TRLA +EAK LHE I KA+ ++E+IRI+TTRSK QL ATFN+Y
Sbjct: 808 VQLVSSYRYEGPEVDTRLAKAEAKQLHEAIKDKAFGNEELIRIITTRSKAQLNATFNYYK 629
Query: 712 DAFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDRYFEKVARQAIAGLGTDENSLTRVIT 891
D +GH INKDLK +++L +L +I+C P+RYF KV R AI LGTDE +L RV+
Sbjct: 628 DDYGHHINKDLKNGKPEDFLESL*IVIKCICFPERYFAKVLRLAIDKLGTDEEALMRVVV 449
Query: 892 TRAEVDLKLIKEAYQKRNSVPLERAVAGDTSGDYESMLLALLGQE 1026
TRAE DL IKE Y+KR S LE AVA DTSGDYE +LL L+G++
Sbjct: 448 TRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYEELLLTLIGKQ 314
Score = 127 bits (271), Expect = 2e-028
Identities = 83/163 (50%), Positives = 96/163 (58%)
Frame = -1 / +3
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 321 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 500
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + S R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 501 NLKTFAKYLSGKQMHLITIHSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 680
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R*VLTSGT 531
I S + LAS A V TSGPS R* LTS T
Sbjct: 681 MRMSSSLPKALSFIASCNCLASAFAKRVSTSGPSYR*ELTS*T 809
>gb|CO200581.1|CO200581 GEO2_8_G01.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_8_G01_A032 3', mRNA sequence
Length = 828
Score = 229 bits (495), Expect = 3e-059
Identities = 96/159 (60%), Positives = 120/159 (75%)
Frame = +1 / +1
Query: 550 YRYDGPEVNTRLAHSEAKLLHEKIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHR 729
YRY+GPEV+TRLA +EAK LHE I KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH
Sbjct: 1 YRYEGPEVDTRLAKAEAKQLHEAIKDKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHH 180
Query: 730 INKDLKADPQDEYLRTLRAIIRCFSCPDRYFEKVARQAIAGLGTDENSLTRVITTRAEVD 909
INKDLK +++L +LR +I+C P+RYF KV R AI LGTDE +L RV+ TRAE D
Sbjct: 181 INKDLKNGKPEDFLESLRIVIKCICFPERYFAKVLRLAIDKLGTDEEALMRVVVTRAETD 360
Query: 910 LKLIKEAYQKRNSVPLERAVAGDTSGDYESMLLALLGQE 1026
L IKE Y+KR S LE AVA DTSGDYE +LL L+G++
Sbjct: 361 LSNIKEEYRKRTSKALEHAVAADTSGDYEELLLTLIGKQ 477
Score = 123 bits (263), Expect = 3e-027
Identities = 79/156 (50%), Positives = 92/156 (58%)
Frame = -1 / -2
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 470 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 291
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 290 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 111
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R 552
I S + LAS A V TSGPS R
Sbjct: 110 MRMSSSLPKALSFIASCNCLASAFAKRVSTSGPSYR 3
>dbj|BD236038.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 704
Score = 229 bits (494), Expect = 4e-059
Identities = 95/179 (53%), Positives = 125/179 (69%)
Frame = +1 / +1
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VP +P ++D ++LRKAF+GWGTNE II ILGH Y E+
Sbjct: 148 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEED 327
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
LL+ + E+S DFE+AV LW LDPAERDAV+++ A +KW N L+EI+ R+SA++
Sbjct: 328 LLKRLESELSSDFEKAVFLWVLDPAERDAVISHGAIKKWNAKNISLLEISSARSSAELLM 507
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKI 621
RQAYH R+K+SLEED+AAH +G+FRKLLV LVS+YRY+GPEV+ LA EAK L E I
Sbjct: 508 VRQAYHIRYKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKLSESI 684
>dbj|BD236002.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 704
Score = 226 bits (488), Expect = 3e-058
Identities = 95/179 (53%), Positives = 124/179 (69%)
Frame = +1 / +1
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VP +P ++D ++LRKAF+GWGTNE II ILGH Y E+
Sbjct: 148 MSTIIVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEED 327
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
LL+ + E+S DFE+AV LW LDPAERDAV+++ A +KW N L+EI+ R+SA++
Sbjct: 328 LLKRLESELSSDFEKAVFLWVLDPAERDAVISHGAIKKWNAKNISLLEISSARSSAELLM 507
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKI 621
RQAYH R K+SLEED+AAH +G+FRKLLV LVS+YRY+GPEV+ LA EAK L E I
Sbjct: 508 VRQAYHIRDKKSLEEDVAAHTSGNFRKLLVALVSSYRYEGPEVDMHLASYEAKKLSESI 684
>gb|DR387786.1|DR387786 RTHG1_24_D03.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_24_D03_A029 3', mRNA sequence
Length = 740
Score = 221 bits (476), Expect = 1e-056
Identities = 93/156 (59%), Positives = 117/156 (75%)
Frame = +1 / +1
Query: 559 DGPEVNTRLAHSEAKLLHEKIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINK 738
+GPEV+TRLA +EAK LHE I KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH INK
Sbjct: 1 EGPEVDTRLAKAEAKQLHEAIKDKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINK 180
Query: 739 DLKADPQDEYLRTLRAIIRCFSCPDRYFEKVARQAIAGLGTDENSLTRVITTRAEVDLKL 918
DLK +++L +LR +I+C P+RYF KV R AI LGTDE +L RV+ TRAE DL
Sbjct: 181 DLKNGKPEDFLESLRIVIKCICFPERYFAKVLRLAIDKLGTDEEALMRVVVTRAETDLSN 360
Query: 919 IKEAYQKRNSVPLERAVAGDTSGDYESMLLALLGQE 1026
IKE Y+KR S LE AVA DTSGDYE +LL L+G++
Sbjct: 361 IKEEYRKRTSKALEHAVAADTSGDYEELLLTLIGKQ 468
Score = 121 bits (258), Expect = 1e-026
Identities = 77/153 (50%), Positives = 90/153 (58%)
Frame = -1 / -1
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 461 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 282
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 281 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 102
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGP 561
I S + LAS A V TSGP
Sbjct: 101 MRMSSSLPKALSFIASCNCLASAFAKRVSTSGP 3
>gb|DR020928.1|DR020928 STRS1_40_E12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_40_E12_A034 3', mRNA sequence
Length = 850
Score = 218 bits (471), Expect = 6e-056
Identities = 93/158 (58%), Positives = 117/158 (74%)
Frame = +1 / +2
Query: 553 RYDGPEVNTRLAHSEAKLLHEKIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRI 732
RY+ PEV+T LA +EAK LHE I KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH I
Sbjct: 2 RYEVPEVDTCLAKAEAKQLHEAIKDKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHI 181
Query: 733 NKDLKADPQDEYLRTLRAIIRCFSCPDRYFEKVARQAIAGLGTDENSLTRVITTRAEVDL 912
NKDLK +++L +LR +I+C P+RYF KV R AI LGTDE +L RV+ TRAE DL
Sbjct: 182 NKDLKNGKPEDFLESLRIVIKCICFPERYFAKVLRLAIDKLGTDEEALMRVVVTRAETDL 361
Query: 913 KLIKEAYQKRNSVPLERAVAGDTSGDYESMLLALLGQE 1026
IKE Y+KR S LE AVA DTSGDYE +LL L+G++
Sbjct: 362 SNIKEEYRKRTSKALEHAVAADTSGDYEELLLTLIGKQ 475
Score = 119 bits (254), Expect = 5e-026
Identities = 78/156 (50%), Positives = 91/156 (58%)
Frame = -1 / -2
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 468 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 289
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVVR 660
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 288 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVVI 109
Query: 659 XXXXXXXXXXXXXIFS*SSLASECANLVLTSGPS*R 552
I S + LAS A V TSG S R
Sbjct: 108 MRMSSSLPKALSFIASCNCLASAFAKHVSTSGTSYR 1
>gb|DR102416.1|DR102416 STRR1_81_A06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_81_A06_A033 3', mRNA sequence
Length = 798
Score = 215 bits (463), Expect = 7e-055
Identities = 90/162 (55%), Positives = 119/162 (73%)
Frame = +1 / +1
Query: 541 VSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYSDDEIIRILTTRSKPQLIATFNHYNDAF 720
VS+YRY+GPEV+ LA EAK L E I K + +E+IRI++TRSK QL ATFN Y D +
Sbjct: 1 VSSYRYEGPEVDMHLASYEAKKLSESITSKNDNYEELIRIISTRSKAQLNATFNCYKDVY 180
Query: 721 GHRINKDLKADPQDEYLRTLRAIIRCFSCPDRYFEKVARQAIAGLGTDENSLTRVITTRA 900
GH INKDLK+ +++ +R +I+C CP+++F KV R AI LGTDE++LTRV+ TRA
Sbjct: 181 GHHINKDLKSQAPEDFQDAVRVVIKCICCPEKHFTKVLRLAIEKLGTDEDALTRVVVTRA 360
Query: 901 EVDLKLIKEAYQKRNSVPLERAVAGDTSGDYESMLLALLGQE 1026
EVD+K IKEAY KR S LE A+A +TSGDY+ LL L+G++
Sbjct: 361 EVDMKHIKEAYAKRTSKTLEHAIASETSGDYQDFLLTLIGKD 486
>gb|DR162787.1|DR162787 RTFE1_20_B06.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_20_B06_A029 5', mRNA sequence
Length = 593
Score = 212 bits (457), Expect = 5e-054
Identities = 84/158 (53%), Positives = 113/158 (71%)
Frame = +1 / +1
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ VPA P +D ++LRKAF+GWGTNE LII ILGH Y E+
Sbjct: 118 MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 297
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
L+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++
Sbjct: 298 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 477
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRY 558
RQAYH R+K+SLEED+A+H GDFRKLLV LVS+YRY
Sbjct: 478 VRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRY 591
>gb|DR078956.1|DR078956 RTFEPL1_8_C02.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_8_C02_A029 3', mRNA sequence
Length = 864
Score = 147 bits (316), Expect(2) = 9e-050
Identities = 62/183 (33%), Positives = 103/183 (56%)
Frame = +1 / -1
Query: 100 VPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEELLRSI 279
V V PV DC+++ A +G G++E II ILG Y E+L + +
Sbjct: 798 VSCGVNPVERDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRL 619
Query: 280 TDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFATRQAY 459
E+ G E+A++LW +PA+RDA++A A W +R L+E+ CTR+S QI R+AY
Sbjct: 618 EKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAY 439
Query: 460 HERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYS 639
+R++R L++D+ G F+KLL+ L+ +R + V+ A +AK+L+E + +
Sbjct: 438 QKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGT 259
Query: 640 DDE 648
D++
Sbjct: 258 DED 250
Score = 70.7 bits (148), Expect(2) = 9e-050
Identities = 32/85 (37%), Positives = 46/85 (54%)
Frame = +1 / -1
Query: 640 DDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDRY 819
+D IRI + R+ L A F Y +GH I K LK + Q E+ +R I+ P Y
Sbjct: 255 EDTFIRIFSERAVSHLHAIFACYKQEYGHDIMKGLKRETQKEFEEAIRVTIKSMYLPANY 76
Query: 820 FEKVARQAIAGLGTDENSLTRVITT 894
F KV + + GL DE+++TRV+ T
Sbjct: 75 FAKVLHRGMKGLLNDESAITRVMVT 1
>gb|BF518299.1|BF518299 NXSI_037_F05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_037_F05 5' similar to Arabidopsis thaliana
sequence At1g35720 Ca2+-dependent membrane-binding
protein annexin see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 509
Score = 192 bits (414), Expect = 4e-048
Identities = 76/150 (50%), Positives = 104/150 (69%)
Frame = +1 / +3
Query: 85 MATLKVPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEE 264
M+T+ A P +D ++LRKAF+GWGTNE LII ILGH Y E+
Sbjct: 60 MSTITXXAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEED 239
Query: 265 LLRSITDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFA 444
L+ + E++ DFERA++LW+LDP ERDA+LA E+ +KW P NR L+EI+ R+S ++++
Sbjct: 240 FLKRLQSELTRDFERALLLWSLDPPERDALLAYESIKKWSPNNRSLLEISSARSSTELWS 419
Query: 445 TRQAYHERFKRSLEEDIAAHVTGDFRKLLV 534
RQAYH R+K+SLEED+A+H GDFRKLLV
Sbjct: 420 VRQAYHIRYKKSLEEDVASHTHGDFRKLLV 509
>gb|CF393612.1|CF393612 RTDR3_15_C10.b1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_15_C10_A022 3', mRNA
sequence
Length = 671
Score = 187 bits (403), Expect = 1e-046
Identities = 78/133 (58%), Positives = 99/133 (74%)
Frame = +1 / +1
Query: 628 KAYSDDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSC 807
KA+ ++E+IRI+TTRSK QL ATFN+Y D +GH INKDLK +++L +LR +I+C
Sbjct: 1 KAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICF 180
Query: 808 PDRYFEKVARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLERAVAGDTSG 987
P+RYF KV R AI LGTDE +L RV+ TRAE DL IKE Y+KR S LE AVA DTSG
Sbjct: 181 PERYFAKVLRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSG 360
Query: 988 DYESMLLALLGQE 1026
DYE +LL L+G++
Sbjct: 361 DYEELLLTLIGKQ 399
Score = 111 bits (238), Expect = 8e-024
Identities = 66/119 (55%), Positives = 78/119 (65%)
Frame = -1 / -1
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 392 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 213
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVV 663
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 212 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVV 36
>dbj|BD236035.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 484
Score = 177 bits (382), Expect(2) = 5e-046
Identities = 70/104 (67%), Positives = 85/104 (81%)
Frame = +1 / +2
Query: 304 ERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFATRQAYHERFKRSL 483
+R V+LW+LDPAERDA LANEA ++W N+VL+EIACTR+ Q+ RQAYH R+K+SL
Sbjct: 173 QRLVVLWSLDPAERDAYLANEATKRWTSSNQVLMEIACTRSPQQLLMARQAYHARYKKSL 352
Query: 484 EEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHE 615
EED+A H TGDFRKLLVPLVS+Y YDG EVN LA +EAK+LHE
Sbjct: 353 EEDVAHHTTGDFRKLLVPLVSSYHYDGDEVNMTLAKAEAKILHE 484
Score = 28.1 bits (55), Expect(2) = 5e-046
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1 / +3
Query: 253 YGEELLRSITDEISGDFE 306
YGE+LL+++ E++ DFE
Sbjct: 33 YGEDLLKALDRELTNDFE 86
>gb|DR021811.1|DR021811 STRS1_47_C06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_47_C06_A034 3', mRNA sequence
Length = 755
Score = 180 bits (388), Expect = 2e-044
Identities = 76/127 (59%), Positives = 94/127 (74%)
Frame = +1 / +1
Query: 646 EIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDRYFE 825
E+IRI+TTRSK QL ATFN+Y D +GH INKDLK +++L +LR +I+C P+RYF
Sbjct: 1 ELIRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFA 180
Query: 826 KVARQAIAGLGTDENSLTRVITTRAEVDLKLIKEAYQKRNSVPLERAVAGDTSGDYESML 1005
KV R AI LGTDE +L RV+ TRAE DL IKE Y+KR S LE AVA DTSGDYE +L
Sbjct: 181 KVLRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKALEHAVAADTSGDYEELL 360
Query: 1006 LALLGQE 1026
L L+G++
Sbjct: 361 LTLIGKQ 381
Score = 111 bits (238), Expect = 8e-024
Identities = 66/119 (55%), Positives = 78/119 (65%)
Frame = -1 / -1
Query: 1019 PRSARSMLS*SPEVSPATARSSGTLFLFWYASLISLRSTSARVVMTLVREFSSVPSPAMA 840
P + S S*SPEVS ATA S+ L L Y+SLI LRS SARV T +R SSVPS ++A
Sbjct: 374 PINVSSNSS*SPEVSAATACSNALLVLLRYSSLILLRSVSARVTTTRIRASSSVPSLSIA 195
Query: 839 CLATFSKYLSGQLKHRMIARSVLRYSSWGSAFRSLLIRWPNASL**LNVAIS*GLLLVV 663
L TF+KYLSG+ H + RS R SS F+SLLI P +SL**L VA + LLLVV
Sbjct: 194 NLKTFAKYLSGKQMHLITIRSDSRKSSGFPFFKSLLI**P*SSL**LKVAFNCALLLVV 18
>gb|CO200810.1|CO200810 RTCNT2_1_E08.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_1_E08_A029 5', mRNA sequence
Length = 765
Score = 147 bits (316), Expect(2) = 1e-043
Identities = 62/183 (33%), Positives = 103/183 (56%)
Frame = +1 / +3
Query: 100 VPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEELLRSI 279
V V PV DC+++ A +G G++E II ILG Y E+L + +
Sbjct: 39 VSCGVNPVERDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRL 218
Query: 280 TDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFATRQAY 459
E+ G E+A++LW +PA+RDA++A A W +R L+E+ CTR+S QI R+AY
Sbjct: 219 EKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDRALIEVICTRSSTQIVKIREAY 398
Query: 460 HERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYS 639
+R++R L++D+ G F+KLL+ L+ +R + V+ A +AK+L+E + +
Sbjct: 399 QKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGT 578
Query: 640 DDE 648
D++
Sbjct: 579 DED 587
Score = 50.6 bits (104), Expect(2) = 1e-043
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +1 / +3
Query: 640 DDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDRY 819
+D IRI + R+ QL A F Y +GH I K LK + Q E+ +R I+ P Y
Sbjct: 582 EDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLKRETQKEFEEAIRVTIKSMYLPANY 761
Query: 820 F 822
F
Sbjct: 762 F 764
>gb|CF393700.1|CF393700 RTDR3_15_G09.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_15_G09_A022 5', mRNA
sequence
Length = 785
Score = 144 bits (308), Expect(2) = 8e-042
Identities = 61/183 (33%), Positives = 102/183 (55%)
Frame = +1 / +1
Query: 100 VPATVPPVADDCDQLRKAFQGWGTNEALIISILGHXXXXXXXXXXXXXXXXYGEELLRSI 279
V V PV DC+++ A +G G++E II ILG Y E+L + +
Sbjct: 61 VSCGVNPVERDCEEIHLACKGLGSDEEKIIEILGSKNEQQRKEIRETYYAMYKEDLCKRL 240
Query: 280 TDEISGDFERAVILWTLDPAERDAVLANEAARKWKPGNRVLVEIACTRTSAQIFATRQAY 459
E+ G E+A++LW +PA+RDA++A A W + L+E+ CTR+S QI R+AY
Sbjct: 241 EKELHGKLEKAIVLWMHEPADRDAIIAGSALEGWCTDDCALIEVICTRSSTQIVKIREAY 420
Query: 460 HERFKRSLEEDIAAHVTGDFRKLLVPLVSTYRYDGPEVNTRLAHSEAKLLHEKIHHKAYS 639
+R++R L++D+ G F+KLL+ L+ +R + V+ A +AK+L+E + +
Sbjct: 421 QKRYQRCLDDDVICKTNGPFQKLLLALLKAHRCECKGVDITKARCDAKMLYEASEGRCGT 600
Query: 640 DDE 648
D++
Sbjct: 601 DED 609
Score = 47.8 bits (98), Expect(2) = 8e-042
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = +1 / +1
Query: 640 DDEIIRILTTRSKPQLIATFNHYNDAFGHRINKDLKADPQDEYLRTLRAIIRCFSCPDRY 819
+D IRI + R+ QL A F Y +GH I K LK + Q E+ +R I+ P Y
Sbjct: 604 EDTFIRIFSERAVSQLHAIFACYKQEYGHDIMKGLKRETQKEFEEAIRVTIKSMYLPANY 783
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 590,431,912
Number of Sequences: 355925
Number of extensions: 8001445
Number of successful extensions: 41925
Number of sequences better than 1.0e-020: 123
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 19739349945
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)