TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493944.2.2
(2027 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR690484.1|DR690484 EST1080570 Normalized pine embryo li... 148 2e-090
gb|DR014430.1|DR014430 HEAT1_49_A07.g1_A029 Root at 37 C fo... 165 2e-089
gb|DR385575.1|DR385575 RTHG1_9_B08.g1_A029 Roots plus added... 125 7e-073
gb|DR093023.1|DR093023 STRR1_5_C02.g1_A033 Stem Response Re... 111 1e-066
gb|CO369494.1|CO369494 RTK1_47_C06.g1_A029 Roots minus pota... 129 3e-063
gb|DR023277.1|DR023277 STRS1_56_C06.g1_A034 Shoot tip pitch... 122 4e-061
gb|DR025015.1|DR025015 STRS1_69_C05.b1_A034 Shoot tip pitch... 102 1e-058
gb|CO364724.1|CO364724 RTK1_21_A05.g1_A029 Roots minus pota... 102 1e-058
gb|CX650195.1|CX650195 COLD1_44_D01.b1_A029 Root cold Pinus... 102 6e-056
gb|DR690351.1|DR690351 EST1080437 Normalized pine embryo li... 105 3e-053
gb|DR385496.1|DR385496 RTHG1_9_B08.b1_A029 Roots plus added... 99 8e-053
gb|DR097982.1|DR097982 STRR1_38_G11.b1_A033 Stem Response R... 103 1e-051
gb|DR094404.1|DR094404 STRR1_14_H05.b1_A033 Stem Response R... 87 2e-051
gb|DR177171.1|DR177171 RTMNUT1_3_C06.g1_A029 Roots minus mi... 96 2e-051
gb|DR018248.1|DR018248 STRS1_21_B10.g1_A034 Shoot tip pitch... 84 4e-051
gb|CF402009.1|CF402009 RTWW1_16_H11.g1_A015 Well-watered lo... 102 3e-050
gb|CO199666.1|CO199666 GEO2_2_E12.g1_A032 Root gravitropism... 88 4e-048
gb|DR093703.1|DR093703 STRR1_9_H08.g1_A033 Stem Response Re... 102 5e-048
gb|CF478708.1|CF478708 RTWW3_16_A04.g1_A022 Well-watered lo... 111 3e-047
gb|CF403042.1|CF403042 RTWW1_24_A01.g1_A015 Well-watered lo... 103 7e-047
gb|DR690131.1|DR690131 EST1080220 Normalized pine embryo li... 97 2e-046
gb|DT636133.1|DT636133 EST1151064 Normalized pine embryo li... 105 2e-045
gb|CO198745.1|CO198745 GEO1_16_E03.b1_A029 Root gravitropis... 103 4e-045
gb|CF478060.1|CF478060 RTWW3_17_H12.g1_A022 Well-watered lo... 102 5e-045
gb|DR686509.1|DR686509 EST1076587 Normalized pine embryo li... 74 9e-044
gb|DR102156.1|DR102156 STRR1_78_H02.g1_A033 Stem Response R... 129 4e-043
gb|CF400266.1|CF400266 RTWW1_4_E08.b1_A015 Well-watered lob... 62 7e-041
gb|DR023588.1|DR023588 STRS1_58_E09.g1_A034 Shoot tip pitch... 102 2e-040
gb|CF471271.1|CF471271 RTDS1_2_E09.g1_A015 Drought-stressed... 76 3e-040
gb|DR024426.1|DR024426 STRS1_64_H04.g1_A034 Shoot tip pitch... 99 2e-039
gb|CO364064.1|CO364064 RTK1_13_A12.g1_A029 Roots minus pota... 79 7e-038
gb|CV034926.1|CV034926 RTNACL1_12_B09.g1_A029 Roots plus ad... 101 2e-037
gb|CO363936.1|CO363936 RTK1_12_E03.g1_A029 Roots minus pota... 82 1e-036
gb|DR167118.1|DR167118 RTPHOS1_16_G01.g1_A029 Roots minus p... 79 6e-035
gb|AW754747.1|AW754747 PC07D06 Pine TriplEx pollen cone lib... 149 6e-035
gb|CF478906.1|CF478906 RTWW3_15_B04.g1_A022 Well-watered lo... 97 1e-034
gb|DR092942.1|DR092942 STRR1_5_C02.b1_A033 Stem Response Re... 100 5e-033
gb|DR023520.1|DR023520 STRS1_58_E09.b1_A034 Shoot tip pitch... 79 3e-032
gb|CF471267.1|CF471267 RTDS1_2_E05.g1_A015 Drought-stressed... 71 1e-031
gb|DR022623.1|DR022623 STRS1_52_G08.b1_A034 Shoot tip pitch... 82 5e-031
gb|DR117697.1|DR117697 RTMG1_8_C08.g1_A029 Roots minus magn... 82 9e-030
gb|DR177096.1|DR177096 RTMNUT1_3_C06.b1_A029 Roots minus mi... 95 9e-028
gb|DR098925.1|DR098925 STRR1_48_G02.g1_A033 Stem Response R... 68 1e-026
gb|DR102090.1|DR102090 STRR1_78_H02.b1_A033 Stem Response R... 100 3e-026
gb|DR098625.1|DR098625 STRR1_46_G04.g1_A033 Stem Response R... 100 3e-026
gb|DR096032.1|DR096032 STRR1_25_G03.b1_A033 Stem Response R... 100 3e-026
gb|DR096113.1|DR096113 STRR1_25_G03.g1_A033 Stem Response R... 100 3e-026
gb|BQ695773.1|BQ695773 NXPV_032_E07_F NXPV (Nsf Xylem Plani... 100 4e-025
gb|DT633444.1|DT633444 EST1148375 Normalized pine embryo li... 74 4e-025
gb|CF671389.1|CF671389 RTCNT1_56_F07.g1_A029 Root control P... 79 2e-024
gb|DR167049.1|DR167049 RTPHOS1_16_G01.b1_A029 Roots minus p... 82 6e-022
gb|CF388658.1|CF388658 RTDR2_4_G01.g1_A021 Loblolly pine ro... 82 6e-022
gb|DR387997.1|DR387997 RTHG1_25_C02.g1_A029 Roots plus adde... 99 2e-021
gb|CO363986.1|CO363986 RTK1_13_A12.b1_A029 Roots minus pota... 79 3e-021
gb|AL750370.1|AL750370 AL750370 RN Pinus pinaster cDNA clon... 103 4e-021
gb|DR093619.1|DR093619 STRR1_9_H08.b1_A033 Stem Response Re... 79 1e-020
>gb|DR690484.1|DR690484 EST1080570 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACV62 3' end, mRNA sequence
Length = 884
Score = 148 bits (318), Expect(5) = 2e-090
Identities = 54/75 (72%), Positives = 63/75 (84%)
Frame = +1 / +2
Query: 217 PPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIP 396
P KNW+NDPNAPM+YKG+YH FYQYNP GAVWGNIVW H VS+DLI+W +L+PA+ PS
Sbjct: 2 PQKNWMNDPNAPMFYKGFYHLFYQYNPYGAVWGNIVWGHVVSKDLIHWRSLDPAIVPSEW 181
Query: 397 GDRYGCWSGSATVLP 441
D GCWSGSAT+LP
Sbjct: 182 YDIKGCWSGSATLLP 226
Score = 110 bits (234), Expect(5) = 6e-039
Identities = 47/75 (62%), Positives = 55/75 (73%)
Frame = -1 / -3
Query: 440 GSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYHPL 261
GS VA+PDQQP++S LG AGSS Q MRS +T C T+ PHTAP GLYW*K+W +PL
Sbjct: 225 GSNVAEPDQQPFISYHSLGTMAGSSERQ*MRSFETTCPQTIFPHTAP*GLYW*KRW*NPL 46
Query: 260 *YMGALGSLIQFLGG 216
* +GALGS IQF G
Sbjct: 45 *NIGALGSFIQFFWG 1
Score = 95.5 bits (202), Expect(5) = 2e-090
Identities = 34/48 (70%), Positives = 41/48 (85%)
Frame = +1 / +2
Query: 976 DEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAG 1119
DE+ LRYDYG FYASKTF+D K+RRILWGW NESD+ +DD +KGW+G
Sbjct: 740 DENGLRYDYGKFYASKTFFDQNKQRRILWGWINESDSVSDDQSKGWSG 883
Score = 79.4 bits (167), Expect(5) = 2e-090
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = +1 / +2
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
Q+Q++ PK+ SDPLLREWVK NP++VP+ GIN + FRDPTT W G
Sbjct: 275 QLQSMVVPKDASDPLLREWVKIPQNPLLVPKFGINGSSFRDPTTGWLG 418
Score = 58.3 bits (121), Expect(5) = 2e-090
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +1 / +2
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDE 981
G +KHVLK SLD +Y+YYTVGTY ++RYVPD+ + D+
Sbjct: 620 GHSLKHVLKVSLDDYKYEYYTVGTYLRDSDRYVPDNTSSDD 742
Score = 42.8 bits (87), Expect(5) = 6e-039
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = -1 / -3
Query: 1118 PAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
P QPL SS +SDSL PHR+R L S NVL+A* P
Sbjct: 882 PDQPLL*SSDTLSDSLIHPHRIRLCLF*SKNVLEA*NFP 766
Score = 40.0 bits (81), Expect(5) = 2e-090
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 775 TGMWECPDFYPVSKGG 822
TGMWECPDFYPV G
Sbjct: 545 TGMWECPDFYPVPLSG 592
Score = 38.6 bits (78), Expect(5) = 6e-039
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = -1 / -3
Query: 641 PRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFG 519
P VVGS N + L+P GT G FTHSR GS+ G
Sbjct: 417 PSHPVVGSLNELPLIPNFGTKRGF*GIFTHSRRRGSEASLG 295
Score = 31.3 bits (62), Expect(5) = 6e-039
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 809 TG*KSGHSHIPV 774
TG*KSGHSHIPV
Sbjct: 579 TG*KSGHSHIPV 544
Score = 23.5 bits (45), Expect(5) = 6e-039
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1 / -3
Query: 962 SGTYRSALGWYVPTVXXXXXXXXRLFLSTCFTLGP 858
SGTYRS VPTV RL TC + P
Sbjct: 723 SGTYRSLSRK*VPTV*YSYL*SSRLTFKTCLSECP 619
>gb|DR014430.1|DR014430 HEAT1_49_A07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_49_A07_A029 5', mRNA sequence
Length = 914
Score = 165 bits (355), Expect(5) = 2e-089
Identities = 60/82 (73%), Positives = 69/82 (84%)
Frame = +1 / +1
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 375
RT YHFQP KNW+NDPNAPM+YKG+YHFFYQYNP+GAVWG IVW H VS+DLINW +L+
Sbjct: 40 RTAYHFQPQKNWMNDPNAPMFYKGYYHFFYQYNPQGAVWGTIVWGHVVSKDLINWHSLDT 219
Query: 376 ALRPSIPGDRYGCWSGSATVLP 441
A+ PS D GCWSGSAT+LP
Sbjct: 220 AIVPSEWYDIKGCWSGSATLLP 285
Score = 109 bits (232), Expect(4) = 3e-030
Identities = 52/88 (59%), Positives = 59/88 (67%)
Frame = -1 / -1
Query: 440 GSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYHPL 261
GS VA+PDQQP +S LG A SS QLMRS +T C T++PHTAP GLY *KKW +PL
Sbjct: 284 GSNVAEPDQQPLISYHSLGTMAVSSECQLMRSLETTCPQTIVPHTAP*GLY**KKW*YPL 105
Query: 260 *YMGALGSLIQFLGGWKWYPVLSRGLTM 177
* MGA GS IQF G KW V R T+
Sbjct: 104 *NMGAFGSFIQFF*G*KW*AVRYRCSTL 21
Score = 77.6 bits (163), Expect(5) = 2e-089
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
Q+Q++ PK+ +DPLLREWVK NP+++PE GIN + FRDP+T W G
Sbjct: 334 QLQSMVVPKDATDPLLREWVKIPQNPLLIPEFGINGSSFRDPSTGWLG 477
Score = 75.8 bits (159), Expect(5) = 2e-089
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +1 / +1
Query: 976 DEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDT 1086
DE LRYDYG FYASKTF+D K+RRILWGW NESD+
Sbjct: 799 DEXGLRYDYGKFYASKTFFDQNKQRRILWGWINESDS 909
Score = 59.7 bits (124), Expect(5) = 2e-089
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +1 / +1
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDE 981
G +KHVLK SLD +YDYYTVGTY +RYVPD+ + D+
Sbjct: 679 GQSLKHVLKVSLDDYKYDYYTVGTYLRDMDRYVPDNTSSDD 801
Score = 40.0 bits (81), Expect(5) = 2e-089
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 775 TGMWECPDFYPVSKGG 822
TGMWECPDFYPV G
Sbjct: 604 TGMWECPDFYPVPLSG 651
Score = 34.5 bits (69), Expect(4) = 3e-030
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -1 / -1
Query: 1085 VSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
+SDSL PHR+R L S NVL+A* LP
Sbjct: 908 LSDSLIHPHRIRLCLF*SKNVLEA*NLP 825
Score = 32.7 bits (65), Expect(4) = 3e-030
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 809 TG*KSGHSHIPVGAE 765
TG*KSGHSHIPV ++
Sbjct: 638 TG*KSGHSHIPVNSD 594
Score = 21.7 bits (41), Expect(4) = 3e-030
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1 / -1
Query: 962 SGTYRSALGWYVPTVXXXXXXXXRLFLSTCFT 867
SGTYRS VPTV RL TC +
Sbjct: 782 SGTYRSMSRK*VPTV**SYL*SSRLTFKTCLS 687
>gb|DR385575.1|DR385575 RTHG1_9_B08.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_9_B08_A029 5', mRNA sequence
Length = 834
Score = 125 bits (268), Expect(5) = 7e-073
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1 / +1
Query: 976 DEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 1152
DE+ LRYDYG FYASKTF+D K RRILWGW NESD+ ADDV+KGWAG+QA+PRT+WLD
Sbjct: 487 DENGLRYDYGKFYASKTFFDQYKNRRILWGWINESDSVADDVSKGWAGLQAVPRTIWLD 663
Score = 79.0 bits (166), Expect(5) = 7e-073
Identities = 27/48 (56%), Positives = 38/48 (79%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
Q+Q++ PK+ +DPLLREWV+ NP+++PE GIN ++FRDPTT W G
Sbjct: 22 QMQSMVVPKDATDPLLREWVRIPQNPLLIPEFGINGSEFRDPTTGWLG 165
Score = 61.1 bits (127), Expect(5) = 7e-073
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +1 / +1
Query: 1165 QLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEV 1311
QLLQWP+ EVE+LR K + ++ + +G VE+ G+ AQ DVEVSF++
Sbjct: 679 QLLQWPVPEVESLRRKEIYKQSIDLSSGSVVEIAGLNAAQVDVEVSFDL 825
Score = 57.9 bits (120), Expect(5) = 7e-073
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +1 / +1
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDE 981
G +KHVLK SLD +Y+YYTVGTY +RYVPD+ + D+
Sbjct: 367 GSSLKHVLKVSLDDYKYEYYTVGTYLRDMDRYVPDNTSSDD 489
Score = 57.9 bits (120), Expect(5) = 3e-022
Identities = 30/50 (60%), Positives = 33/50 (66%)
Frame = -1 / -2
Query: 1151 SSHTVLGMAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
SS VLG A PAQPL TSSA +SDSL QPHR+R L S V +A* P
Sbjct: 662 SSQIVLGTA*RPAQPLLTSSATLSDSLIQPHRIRLFLY*SKKVFEA*NFP 513
Score = 46.0 bits (94), Expect(5) = 3e-022
Identities = 22/48 (45%), Positives = 24/48 (50%)
Frame = -1 / -2
Query: 1307 SKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSC 1164
SK TSTS CA P ST P L ++ F STS GHC SC
Sbjct: 821 SKETSTSTCAALRPAISTTDPLLRSMLCLYISFRRRDSTSGTGHCKSC 678
Score = 38.2 bits (77), Expect(5) = 7e-073
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1 / +1
Query: 775 TGMWECPDFYPVSKGG 822
TGMWECPDFYP G
Sbjct: 292 TGMWECPDFYPAPLSG 339
Score = 32.2 bits (64), Expect(5) = 3e-022
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -1 / -2
Query: 641 PRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFG 519
P VVGS N + L+P SG G THS GS G
Sbjct: 164 PSHPVVGSLNSLPLIPNSGIKRGF*GILTHSLKRGSVASLG 42
Score = 29.0 bits (57), Expect(5) = 3e-022
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 806 G*KSGHSHIPV 774
G*KSGHSHIPV
Sbjct: 323 G*KSGHSHIPV 291
Score = 23.1 bits (44), Expect(5) = 3e-022
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1 / -2
Query: 962 SGTYRSALGWYVPTVXXXXXXXXRLFLSTCFTLGP 858
SGTYRS VPTV +L TC P
Sbjct: 470 SGTYRSMSRK*VPTV*YSYL*SSKLTFKTCLREEP 366
>gb|DR093023.1|DR093023 STRR1_5_C02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_C02_A033 5', mRNA sequence
Length = 905
Score = 111 bits (237), Expect(5) = 1e-066
Identities = 43/62 (69%), Positives = 49/62 (79%)
Frame = +1 / +1
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQ 1167
LRYDYG FYASKTF+DP K RRILWGW NESD+ ADD+ K WA +QAIPR V LDP ++
Sbjct: 130 LRYDYGKFYASKTFFDPRKSRRILWGWINESDSVADDLNKQWASLQAIPRVVRLDPLTRR 309
Query: 1168 LL 1173
L
Sbjct: 310 SL 315
Score = 85.8 bits (181), Expect(5) = 1e-066
Identities = 33/80 (41%), Positives = 53/80 (66%)
Frame = +1 / +1
Query: 1513 VLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRV 1692
V +C D ++S+ ++ + ++ GFV +SLR L+D S+VESF GG+TCI SR
Sbjct: 649 VALCVDQSRSTLQVDVDKTSYGGFVSVKPHQRSLSLRVLVDHSIVESFAEGGRTCITSRS 828
Query: 1693 YPSLAIGKDARLYVFNNGRA 1752
YP+LA+ ++A L+VFN ++
Sbjct: 829 YPTLAVNENAHLFVFNYNKS 888
Score = 53.3 bits (110), Expect(5) = 1e-066
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +1 / +1
Query: 865 RVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDD 966
R +HVLKNSLD + DYYTVG Y P ++YVP++
Sbjct: 4 RCEHVLKNSLDDTKVDYYTVGHYLPHLDKYVPEN 105
Score = 40.5 bits (82), Expect(5) = 1e-066
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +1 / +1
Query: 1162 KQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFE 1308
+ L QWP+ E+E+LRA +V + V++ ++V G + A V+V E
Sbjct: 307 RSLFQWPVPELESLRAYNVRKDHVVLERESVMKVEGFNSGAAQVDVEVE 453
Score = 39.6 bits (80), Expect(5) = 1e-066
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1 / +1
Query: 1420 FGLWVLASANRKERTAVFFRVFK 1488
FGL VLAS + KER+AVFF++FK
Sbjct: 550 FGLMVLASDDLKERSAVFFKIFK 618
>gb|CO369494.1|CO369494 RTK1_47_C06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_47_C06_A029 5', mRNA sequence
Length = 818
Score = 129 bits (276), Expect(5) = 3e-063
Identities = 46/79 (58%), Positives = 56/79 (70%)
Frame = +1 / +2
Query: 202 GYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPAL 381
G +FQ NW+NDPN P+ YKGWYH FYQYNP AVWGNI W H+VS+DL++W L+ A+
Sbjct: 8 GVYFQTEANWMNDPNGPLVYKGWYHLFYQYNPVSAVWGNIAWGHAVSKDLVHWFYLDLAM 187
Query: 382 RPSIPGDRYGCWSGSATVL 438
P D G W+GSAT L
Sbjct: 188 IPDRWYDINGVWTGSATFL 244
Score = 73.9 bits (155), Expect(5) = 3e-063
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1 / +2
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
QVQN+A+P++ SDPLLR+WVK NPV+VP I FRDP+T W G
Sbjct: 296 QVQNLAFPEDPSDPLLRKWVKSEANPVLVPPKEIGTKDFRDPSTGWIG 439
Score = 73.0 bits (153), Expect(2) = 4e-021
Identities = 37/77 (48%), Positives = 41/77 (53%)
Frame = -1 / -3
Query: 431 VADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYHPL*YM 252
VA+P Q P +S G+ A S Q RS DT H M PHTA GLY * + YHPL
Sbjct: 237 VAEPVQTPLMSYQRSGIMARSR*NQCTRSFDTA*PHAMFPHTAETGLY**NR*YHPLYTS 58
Query: 251 GALGSLIQFLGGWKWYP 201
G GS IQF WK P
Sbjct: 57 GPFGSFIQFASVWK*TP 7
Score = 56.1 bits (116), Expect(5) = 3e-063
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1 / +2
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
G VKHVLK S D + DYY +GTY +R+VPDDPA D
Sbjct: 638 GVGVKHVLKASFDDDKNDYYAIGTYDLEKQRFVPDDPALD 757
Score = 50.1 bits (103), Expect(2) = 4e-021
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = -1 / -3
Query: 641 PRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWT 501
P Q V+GS + + GT TGL FTH R SGSD G A FWT
Sbjct: 438 PIQPVLGSLKSLVPISLGGTRTGLASDFTHFRRSGSDGSSGNAKFWT 298
Score = 35.0 bits (70), Expect(5) = 3e-063
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1 / +2
Query: 988 LRYDYGNFYASKTFYD 1035
LR DYG +YASK+FYD
Sbjct: 770 LRIDYGKYYASKSFYD 817
Score = 35.0 bits (70), Expect(5) = 3e-063
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DF+PV+ G
Sbjct: 563 TGMWECVDFFPVAVSG 610
>gb|DR023277.1|DR023277 STRS1_56_C06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_56_C06_A034 5', mRNA sequence
Length = 811
Score = 122 bits (260), Expect(5) = 4e-061
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +1 / +2
Query: 976 DEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDP 1155
DE+ LRYDYG FYASKTF+D K+RRILWGW NESD+ +DD +KGW+G+QAIPRT+WLD
Sbjct: 101 DENGLRYDYGKFYASKTFFDQNKQRRILWGWINESDSVSDDQSKGWSGVQAIPRTIWLDQ 280
Query: 1156 SGKQLL 1173
+ + L
Sbjct: 281 ATRARL 298
Score = 67.0 bits (140), Expect(5) = 4e-061
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +1 / +2
Query: 1165 QLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSALAGAE 1338
+LLQWP+ EVEALR K + +N +++G VE+ G+ AQ DVEVSF++ + +A E
Sbjct: 293 RLLQWPVSEVEALRRKKTSKQNLHLRSGSVVEIAGVNAAQVDVEVSFDLPRAKIAEFE 466
Score = 47.8 bits (98), Expect(5) = 4e-061
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +1 / +2
Query: 1366 AERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFK 1488
A++LC + R VGPFGL VLAS + ERTAVFF++ +
Sbjct: 491 AQQLCSQLGSAARTVVGPFGLLVLASKDLNERTAVFFQIVR 613
Score = 42.8 bits (87), Expect(5) = 4e-061
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1 / +2
Query: 1612 ISLRSLIDRSVVESFGAGGKTCI 1680
+SLR L+D S+VESFG GGK CI
Sbjct: 737 LSLRVLVDHSIVESFGEGGKACI 805
Score = 42.3 bits (86), Expect(5) = 4e-061
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +1 / +2
Query: 904 RYDYYTVGTYHPRAERYVPDDPAGDE 981
+Y+YYTVGTY ++RYVPD+ + D+
Sbjct: 26 KYEYYTVGTYLRDSDRYVPDNTSSDD 103
>gb|DR025015.1|DR025015 STRS1_69_C05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_69_C05_A034 3', mRNA sequence
Length = 869
Score = 102 bits (217), Expect(5) = 1e-058
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1 / -3
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
LR DYG +YASK+FYDP K+RRILWGW E+D+ +D+ KGWA +Q +PR VW D K
Sbjct: 801 LRIDYGKYYASKSFYDPLKQRRILWGWVGETDSEQNDLRKGWASLQTVPRAVWFDDKTK 625
Score = 76.7 bits (161), Expect(5) = 1e-058
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +1 / -3
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEM 1788
IS+R+L+D S+VES+ GG+ CI SRVYP+ ++ A+L++FNN A VKV L W +
Sbjct: 192 ISVRTLVDHSIVESYAQGGRRCITSRVYPTRSLNGAAKLFLFNNATAAVKVQSLNVWHI 16
Score = 56.1 bits (116), Expect(5) = 1e-058
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +1 / -3
Query: 1150 DPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSA 1323
D + ++QWPIEE++ LR+ + ++N +++ G VEV AQ D+E++FE +A
Sbjct: 636 DKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQLDIELAFEFPDAA 463
Score = 44.6 bits (91), Expect(5) = 1e-058
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +1 / -3
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
RG +GPFGL VLA N E+TAV+F V K A G
Sbjct: 399 RGRLGPFGLLVLAEKNLTEQTAVYFYVAKSADG 301
Score = 24.0 bits (46), Expect(5) = 1e-058
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 946 ERYVPDDPAGD 978
+R+VPDDPA D
Sbjct: 846 QRFVPDDPALD 814
>gb|CO364724.1|CO364724 RTK1_21_A05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_21_A05_A029 5', mRNA sequence
Length = 854
Score = 102 bits (217), Expect(5) = 1e-058
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1 / +2
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
LR DYG +YASK+FYDP K+RRILWGW E+D+ +D+ KGWA +Q +PR VW D K
Sbjct: 44 LRIDYGKYYASKSFYDPLKQRRILWGWVGETDSEQNDLRKGWASLQTVPRAVWFDDKTK 220
Score = 79.0 bits (166), Expect(5) = 1e-058
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +1 / +2
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMK 1791
IS+R+L+D S+VES+ GG+ CI SRVYP+ ++ A+L++FNN A VKV L W M
Sbjct: 653 ISVRTLVDHSIVESYAQGGRRCITSRVYPTRSLNGAAKLFLFNNATAAVKVQSLNVWHMD 832
Query: 1792 KPVMN 1806
M+
Sbjct: 833 SVSMH 847
Score = 56.1 bits (116), Expect(5) = 1e-058
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +1 / +2
Query: 1150 DPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSA 1323
D + ++QWPIEE++ LR+ + ++N +++ G VEV AQ D+E++FE +A
Sbjct: 209 DKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQLDIELAFEFPDAA 382
Score = 42.8 bits (87), Expect(5) = 1e-058
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +1 / +2
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPA 1494
RG +GPFGL VLA N E+TAV+F V K A
Sbjct: 446 RGRLGPFGLLVLAEKNLTEQTAVYFYVAKSA 538
Score = 23.1 bits (44), Expect(5) = 1e-058
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 949 RYVPDDPAGD 978
R+VPDDPA D
Sbjct: 2 RFVPDDPALD 31
>gb|CX650195.1|CX650195 COLD1_44_D01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_44_D01_A029 3', mRNA sequence
Length = 847
Score = 102 bits (217), Expect(6) = 6e-056
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1 / -2
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
LR DYG +YASK+FYDP K+RRILWGW E+D+ +D+ KGWA +Q +PR VW D K
Sbjct: 477 LRIDYGKYYASKSFYDPLKQRRILWGWVGETDSEQNDLKKGWASLQTVPRAVWFDDKTK 301
Score = 56.1 bits (116), Expect(6) = 6e-056
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +1 / -2
Query: 1150 DPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSA 1323
D + ++QWPIEE++ LR+ + ++N +++ G VEV AQ D+E++FE +A
Sbjct: 312 DKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQLDIELAFEFPDAA 139
Score = 56.1 bits (116), Expect(6) = 6e-056
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1 / -2
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
G VKHVLK S D + DYY +GTY +R+VPDDPA D
Sbjct: 609 GVGVKHVLKASFDDDKNDYYAIGTYDLEKQRFVPDDPALD 490
Score = 39.1 bits (79), Expect(6) = 6e-056
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1402 RGGVGPFGLWVLASANRKERTAVFF 1476
RG +GPFGL VLA N E+TAV+F
Sbjct: 75 RGRLGPFGLLVLAEKNLTEQTAVYF 1
Score = 35.0 bits (70), Expect(6) = 6e-056
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DF+PV+ G
Sbjct: 684 TGMWECVDFFPVAVSG 637
Score = 23.1 bits (44), Expect(6) = 6e-056
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / -2
Query: 613 FRDPTTAWRG 642
FRDP+T W G
Sbjct: 837 FRDPSTGWIG 808
>gb|DR690351.1|DR690351 EST1080437 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACU06 3' end, mRNA sequence
Length = 908
Score = 105 bits (224), Expect(5) = 3e-053
Identities = 41/62 (66%), Positives = 47/62 (75%)
Frame = +1 / +2
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQ 1167
LRYDYG FYASKTF+D K RILWGW NESD+ DD+ KGWA +QAIPR V LDP ++
Sbjct: 224 LRYDYGKFYASKTFFDDNKSLRILWGWINESDSLVDDLNKGWASLQAIPRVVRLDPLTRR 403
Query: 1168 LL 1173
L
Sbjct: 404 SL 409
Score = 63.4 bits (132), Expect(5) = 3e-053
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +1 / +2
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDD 966
GP VKHVLKNSLD + DYYTVG Y P+ +RY+PD+
Sbjct: 92 GPSVKHVLKNSLDNTKVDYYTVGHYLPQLDRYLPDN 199
Score = 47.3 bits (97), Expect(5) = 3e-053
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1 / +3
Query: 1513 VLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 1671
V +C D + S+ ++ + ++ GFV +SLR L+D S+VESF GG+
Sbjct: 744 VALCVDQSTSTLQLDVDKTSYGGFVSVTPHQRSLSLRVLVDHSIVESFAEGGR 902
Score = 42.8 bits (87), Expect(5) = 3e-053
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +1 / +2
Query: 775 TGMWECPDFYPVSKGGAPRAGLETSVP 855
TGMWECPDFYPVS G+ T+ P
Sbjct: 17 TGMWECPDFYPVSLYGSHGLDTSTTGP 97
Score = 36.8 bits (74), Expect(5) = 3e-053
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1 / +3
Query: 1414 GPFGLWVLASANRKERTAVFFRVFK 1488
G GL VLAS + KER+AVFF+ FK
Sbjct: 639 GDSGLMVLASDDLKERSAVFFKTFK 713
>gb|DR385496.1|DR385496 RTHG1_9_B08.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_9_B08_A029 3', mRNA sequence
Length = 819
Score = 99.1 bits (210), Expect(4) = 8e-053
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = +1 / +2
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEM 1788
+SLR L+D S+VESFG GGK CI +RVYP+LAI KDA LYVFNNG + V ++ TAWEM
Sbjct: 548 LSLRVLVDHSIVESFGEGGKVCITARVYPTLAIDKDAHLYVFNNGTSAVTATKFTAWEM 724
Score = 65.2 bits (136), Expect(4) = 8e-053
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +1 / +2
Query: 1066 WANESDTAADDVAKGWAGIQAIPRTVWLD 1152
W NESD+ ADDV+KGW G+QA+PRT+WLD
Sbjct: 2 WINESDSVADDVSKGWXGLQAVPRTIWLD 88
Score = 61.6 bits (128), Expect(4) = 8e-053
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +1 / +2
Query: 1165 QLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSALAGAE 1338
QLLQWP+ EVE+LR K + ++ + +G VE+ G+ AQ DVEVSF++ +A E
Sbjct: 104 QLLQWPVPEVESLRRKEIYKQSIDLSSGSVVEIAGLNAAQVDVEVSFDLPRLEIAEFE 277
Score = 56.1 bits (116), Expect(4) = 1e-025
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / -1
Query: 1787 ISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRSIR 1626
ISHAV +T +PLL T*R ASL +A G*T M PP+PKLST + S R
Sbjct: 723 ISHAVNLVAVTAEVPLLKT*RWASLSIARVG*TRAVMHTFPPSPKLSTIE*STR 562
Score = 48.7 bits (100), Expect(4) = 8e-053
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +1 / +2
Query: 1366 AERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFK 1488
A++LCG + R GPFGL+VLAS + ERTAVFF++ +
Sbjct: 302 AQQLCGRMGSAARTVGGPFGLFVLASKDLNERTAVFFQIVR 424
Score = 46.0 bits (94), Expect(4) = 1e-025
Identities = 22/48 (45%), Positives = 24/48 (50%)
Frame = -1 / -1
Query: 1307 SKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSC 1164
SK TSTS CA P ST P L ++ F STS GHC SC
Sbjct: 246 SKETSTSTCAALRPAISTTDPLLRSMLCLYISFRRRDSTSGTGHCKSC 103
Score = 40.5 bits (82), Expect(4) = 1e-025
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -1 / -1
Query: 1475 KNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
KNTAV S + EA T+SPNGP L + PH
Sbjct: 411 KNTAVRSFKSLEAKTNSPNGPPTVLAAEPIRPH 313
Score = 39.1 bits (79), Expect(4) = 1e-025
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = -1 / -1
Query: 1151 SSHTVLGMAWIPAQPLATSSAAVSDSLAQ 1065
SS VLG A P QPL TSSA +SDSL Q
Sbjct: 87 SSQIVLGTA*RPXQPLLTSSATLSDSLIQ 1
>gb|DR097982.1|DR097982 STRR1_38_G11.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_38_G11_A033 3', mRNA sequence
Length = 814
Score = 103 bits (219), Expect(6) = 1e-051
Identities = 36/59 (61%), Positives = 43/59 (72%)
Frame = +1 / -1
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
LRYDYG +YASK+FYDP K RRILWGW E+D+ D+ KGWA +Q IPR +W D K
Sbjct: 445 LRYDYGKYYASKSFYDPVKERRILWGWVGETDSEQADLRKGWASLQTIPRHIWFDNKTK 269
Score = 57.0 bits (118), Expect(6) = 1e-051
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / -1
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
G VKHVLK S D ++DYY VGTY+ +++++PDDP D
Sbjct: 577 GVGVKHVLKASFDDDKHDYYAVGTYNATSQKFIPDDPEMD 458
Score = 48.3 bits (99), Expect(6) = 1e-051
Identities = 17/47 (36%), Positives = 33/47 (70%)
Frame = +1 / -1
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFE 1308
++QWPIEE++ LR+ ++ ++N +++ G V+V + AQ D+E+ E
Sbjct: 262 IIQWPIEEIDELRSGALVVENVLLQPGSVVKVNTTEAAQLDIELVIE 122
Score = 37.3 bits (75), Expect(6) = 1e-051
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / -1
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DFYPV+ G
Sbjct: 652 TGMWECVDFYPVAASG 605
Score = 25.8 bits (50), Expect(6) = 1e-051
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / -1
Query: 1390 RADVRGGVGPFGLWVLA 1440
RA RG +GPFGL V+A
Sbjct: 52 RAAGRGVLGPFGLLVIA 2
Score = 24.9 bits (48), Expect(6) = 1e-051
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / -1
Query: 613 FRDPTTAWRG 642
FRDPTT W G
Sbjct: 805 FRDPTTGWIG 776
>gb|DR094404.1|DR094404 STRR1_14_H05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_14_H05_A033 3', mRNA sequence
Length = 793
Score = 87.2 bits (184), Expect(4) = 2e-051
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = +1 / -3
Query: 1009 FYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
+YASK+FYDP K RRILWGW E+D+ D+ KGWA +Q IPR +W D K
Sbjct: 788 YYASKSFYDPVKERRILWGWVGETDSEQADLRKGWASLQTIPRHIWFDNKTK 633
Score = 82.2 bits (173), Expect(4) = 2e-051
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +1 / -3
Query: 1597 ISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLT 1776
++N IS+R+L+D S+VES+ GG+ CI SRVYP+ A+ A+L++FNN VKV L
Sbjct: 215 LANESISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTAVKVQSLN 36
Query: 1777 AWEMK 1791
W+M+
Sbjct: 35 VWQME 21
Score = 48.3 bits (99), Expect(4) = 2e-051
Identities = 17/47 (36%), Positives = 33/47 (70%)
Frame = +1 / -3
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFE 1308
++QWPIEE++ LR+ ++ ++N +++ G V+V + AQ D+E+ E
Sbjct: 626 IIQWPIEEIDELRSGALVVENVLLQPGSVVKVNTTEAAQLDIELVIE 486
Score = 43.7 bits (89), Expect(4) = 2e-051
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +1 / -3
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
RG +GPFGL V+A N E+TAV+F V K A G
Sbjct: 404 RGVLGPFGLLVIAEKNLTEQTAVYFYVVKSADG 306
>gb|DR177171.1|DR177171 RTMNUT1_3_C06.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_C06_A029 5', mRNA sequence
Length = 745
Score = 95.9 bits (203), Expect(5) = 2e-051
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = +1 / +1
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEM 1788
+SLR L+D S+VESF GGK CI +R YP+LAIG+DA LYVFNNG + V ++L AWEM
Sbjct: 514 LSLRVLVDHSIVESFAEGGKACITARAYPTLAIGRDAHLYVFNNGTSSVTATKLIAWEM 690
Score = 63.4 bits (132), Expect(5) = 2e-051
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +1 / +1
Query: 1165 QLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEV 1311
QLLQWP+ EVE+LR +N + +G VE+ GI AQADVEVSF++
Sbjct: 70 QLLQWPVSEVESLRRSKTLKQNIDLSSGSVVEIAGINAAQADVEVSFDL 216
Score = 46.4 bits (95), Expect(5) = 2e-051
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1 / +1
Query: 1366 AERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFK 1488
A+ LC + R VGPFGL VLAS + ERTAVFF++ +
Sbjct: 268 AQNLCSRIGSAARTVVGPFGLLVLASKDLNERTAVFFQIVR 390
Score = 43.7 bits (89), Expect(5) = 2e-051
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1 / +1
Query: 1099 VAKGWAGIQAIPRTVWLD 1152
+ KGW+G+QAIPRTVWLD
Sbjct: 1 ITKGWSGLQAIPRTVWLD 54
Score = 29.0 bits (57), Expect(5) = 2e-051
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1 / +1
Query: 1513 VLMCTDPTKSSQNPNLYRPTFAGFVD 1590
VLMC+D ++SS +L + T+ FV+
Sbjct: 409 VLMCSDQSRSSLKNDLDKTTYGAFVN 486
>gb|DR018248.1|DR018248 STRS1_21_B10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_21_B10_A034 5', mRNA sequence
Length = 684
Score = 83.5 bits (176), Expect(5) = 4e-051
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1 / +3
Query: 976 DEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADD 1098
DE+ LRYDYG FYASKTF+D K RRILWGW NESD+ ADD
Sbjct: 561 DENGLRYDYGKFYASKTFFDQYKNRRILWGWINESDSVADD 683
Score = 79.0 bits (166), Expect(5) = 4e-051
Identities = 27/48 (56%), Positives = 38/48 (79%)
Frame = +1 / +3
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
Q+Q++ PK+ +DPLLREWV+ NP+++PE GIN ++FRDPTT W G
Sbjct: 96 QMQSMVVPKDATDPLLREWVRIPQNPLLIPEFGINGSEFRDPTTGWLG 239
Score = 57.9 bits (120), Expect(5) = 4e-051
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +1 / +3
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDE 981
G +KHVLK SLD +Y+YYTVGTY +RYVPD+ + D+
Sbjct: 441 GSSLKHVLKVSLDDYKYEYYTVGTYLRDMDRYVPDNTSSDD 563
Score = 38.2 bits (77), Expect(5) = 4e-051
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1 / +3
Query: 775 TGMWECPDFYPVSKGG 822
TGMWECPDFYP G
Sbjct: 366 TGMWECPDFYPAPLSG 413
Score = 28.1 bits (55), Expect(5) = 4e-051
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 400 DRYGCWSGSATVL 438
D GCWSGSAT+L
Sbjct: 6 DIKGCWSGSATLL 44
>gb|CF402009.1|CF402009 RTWW1_16_H11.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_16_H11_A015 5', mRNA sequence
Length = 754
Score = 102 bits (217), Expect(4) = 3e-050
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1 / +1
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
LR DYG +YASK+FYDP K+RRILWGW E+D+ +D+ KGWA +Q +PR VW D K
Sbjct: 157 LRIDYGKYYASKSFYDPLKQRRILWGWVGETDSEQNDLRKGWASLQTVPRAVWFDDKTK 333
Score = 56.1 bits (116), Expect(4) = 3e-050
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +1 / +1
Query: 1150 DPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSA 1323
D + ++QWPIEE++ LR+ + ++N +++ G VEV AQ D+E++FE +A
Sbjct: 322 DKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQLDIELAFEFPDAA 495
Score = 56.1 bits (116), Expect(4) = 3e-050
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1 / +1
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
G VKHVLK S D + DYY +GTY +R+VPDDPA D
Sbjct: 25 GVGVKHVLKASFDDDKNDYYAIGTYDLEKQRFVPDDPALD 144
Score = 42.8 bits (87), Expect(4) = 3e-050
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1 / +1
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
RG +GPFGL VLA N E+TAV+F V K G
Sbjct: 559 RGRLGPFGLLVLAEKNLTEQTAVYFYVAKSTDG 657
>gb|CO199666.1|CO199666 GEO2_2_E12.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_2_E12_A032 5', mRNA sequence
Length = 836
Score = 87.7 bits (185), Expect(4) = 4e-048
Identities = 34/59 (57%), Positives = 44/59 (74%)
Frame = +1 / +3
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEM 1788
+SLR L+D S+VESF GG+ CI +R YP+ AIG+ A LYVFNNG + V ++L AWEM
Sbjct: 543 LSLRVLVDHSIVESFAEGGQACITARAYPTQAIGEGAHLYVFNNGTSSVTATKLIAWEM 719
Score = 66.6 bits (139), Expect(4) = 4e-048
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +1 / +3
Query: 1021 KTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQ 1125
++F+D K+RRILWGW NESD+ +DD+ KGW+G+Q
Sbjct: 6 QSFFDQYKQRRILWGWVNESDSISDDITKGWSGLQ 110
Score = 58.8 bits (122), Expect(4) = 4e-048
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +1 / +3
Query: 1171 LQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEV 1311
LQWP+ EVE+LR +N + +G VE+ GI AQADVEVSF++
Sbjct: 105 LQWPVSEVESLRRNKTFRQNIDLSSGSVVEIAGINVAQADVEVSFDL 245
Score = 45.5 bits (93), Expect(4) = 4e-048
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1 / +3
Query: 1366 AERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFK 1488
A+ LC + R VGPFGL VLAS + ERTAVFF++ +
Sbjct: 297 AQNLCRRIGSAARTVVGPFGLLVLASKDLNERTAVFFQIVR 419
>gb|DR093703.1|DR093703 STRR1_9_H08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_9_H08_A033 5', mRNA sequence
Length = 801
Score = 102 bits (217), Expect(4) = 5e-048
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1 / +3
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
LR DYG +YASK+FYDP K+RRILWGW E+D+ +D+ KGWA +Q +PR VW D K
Sbjct: 399 LRIDYGKYYASKSFYDPLKQRRILWGWVGETDSEQNDLRKGWASLQTVPRAVWFDDKTK 575
Score = 56.1 bits (116), Expect(4) = 5e-048
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +1 / +3
Query: 1150 DPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSA 1323
D + ++QWPIEE++ LR+ + ++N +++ G VEV AQ D+E++FE +A
Sbjct: 564 DKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQLDIELAFEFPDAA 737
Score = 56.1 bits (116), Expect(4) = 5e-048
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1 / +3
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
G VKHVLK S D + DYY +GTY +R+VPDDPA D
Sbjct: 267 GVGVKHVLKASFDDDKNDYYAIGTYDLEKQRFVPDDPALD 386
Score = 35.0 bits (70), Expect(4) = 5e-048
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DF+PV+ G
Sbjct: 192 TGMWECVDFFPVAVSG 239
>gb|CF478708.1|CF478708 RTWW3_16_A04.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_16_A04_A022 5', mRNA sequence
Length = 666
Score = 111 bits (237), Expect(5) = 3e-047
Identities = 43/62 (69%), Positives = 49/62 (79%)
Frame = +1 / +2
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQ 1167
LRYDYG FYASKTF+DP K RRILWGW NESD+ ADD+ K WA +QAIPR V LDP ++
Sbjct: 191 LRYDYGKFYASKTFFDPRKSRRILWGWINESDSVADDLNKQWASLQAIPRVVRLDPLTRR 370
Query: 1168 LL 1173
L
Sbjct: 371 SL 376
Score = 60.6 bits (126), Expect(5) = 3e-047
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +1 / +2
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDD 966
GP VKHVLKNSLD + DYYTVG Y P ++YVP++
Sbjct: 59 GPAVKHVLKNSLDDTKVDYYTVGHYLPHLDKYVPEN 166
Score = 40.5 bits (82), Expect(5) = 3e-047
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +1 / +2
Query: 1162 KQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFE 1308
+ L QWP+ E+E+LRA +V + V++ ++V G + A V+V E
Sbjct: 368 RSLFQWPVPELESLRAYNVRKDHVVLERESVMKVEGFNSGAAQVDVEVE 514
Score = 29.5 bits (58), Expect(5) = 3e-047
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1 / +2
Query: 1420 FGLWVLASANRKERTAVF 1473
FGL VLAS + KER+AVF
Sbjct: 611 FGLMVLASDDLKERSAVF 664
Score = 22.1 bits (42), Expect(5) = 3e-047
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 793 PDFYPVSKGG 822
PDFYPVS G
Sbjct: 2 PDFYPVSLYG 31
>gb|CF403042.1|CF403042 RTWW1_24_A01.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_24_A01_A015 5', mRNA sequence
Length = 624
Score = 103 bits (219), Expect(4) = 7e-047
Identities = 36/59 (61%), Positives = 43/59 (72%)
Frame = +1 / +3
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
LRYDYG +YASK+FYDP K RRILWGW E+D+ D+ KGWA +Q IPR +W D K
Sbjct: 228 LRYDYGKYYASKSFYDPVKERRILWGWVGETDSEQADLRKGWASLQTIPRHIWFDNKTK 404
Score = 57.0 bits (118), Expect(4) = 7e-047
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +3
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
G VKHVLK S D ++DYY VGTY+ +++++PDDP D
Sbjct: 96 GVGVKHVLKASFDDDKHDYYAVGTYNATSQKFIPDDPEMD 215
Score = 48.3 bits (99), Expect(4) = 7e-047
Identities = 17/47 (36%), Positives = 33/47 (70%)
Frame = +1 / +3
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFE 1308
++QWPIEE++ LR+ ++ ++N +++ G V+V + AQ D+E+ E
Sbjct: 411 IIQWPIEEIDELRSGALVVENVLLQPGSVVKVNTTEAAQLDIELVIE 551
Score = 37.3 bits (75), Expect(4) = 7e-047
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DFYPV+ G
Sbjct: 21 TGMWECVDFYPVAASG 68
>gb|DR690131.1|DR690131 EST1080220 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACR49 3' end, mRNA sequence
Length = 824
Score = 97.3 bits (206), Expect(4) = 2e-046
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = +1 / +3
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEM 1788
+SLR L+D S+VESFG GGK CI +RVYP+L I KDA LYVFNNG + V ++ TAWEM
Sbjct: 516 LSLRVLVDHSIVESFGEGGKVCITARVYPTLVIDKDAHLYVFNNGTSTVTATKFTAWEM 692
Score = 61.6 bits (128), Expect(4) = 2e-046
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +1 / +3
Query: 1165 QLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSALAGAE 1338
QLLQWP+ EVE+LR K + ++ + +G VE+ G+ AQ DVEVSF++ +A E
Sbjct: 72 QLLQWPVPEVESLRRKEIYKQSIDLSSGSVVEIAGLNAAQVDVEVSFDLPRLEIAEFE 245
Score = 53.8 bits (111), Expect(4) = 8e-021
Identities = 28/54 (51%), Positives = 33/54 (61%)
Frame = -1 / -2
Query: 1787 ISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRSIR 1626
ISHAV +T +PLL T*R ASL + G*T M PP+PKLST + S R
Sbjct: 691 ISHAVNLVAVTVEVPLLKT*RWASLSITRVG*TRAVMHTFPPSPKLSTIE*STR 530
Score = 48.7 bits (100), Expect(4) = 2e-046
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +1 / +3
Query: 1366 AERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFK 1488
A++LCG + R GPFGL+VLAS + ERTAVFF++ +
Sbjct: 270 AQQLCGRMGSAARTVGGPFGLFVLASKDLNERTAVFFQIVR 392
Score = 46.0 bits (94), Expect(4) = 8e-021
Identities = 22/48 (45%), Positives = 24/48 (50%)
Frame = -1 / -2
Query: 1307 SKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSC 1164
SK TSTS CA P ST P L ++ F STS GHC SC
Sbjct: 214 SKETSTSTCAALRPAISTTDPLLRSMLCLYISFRRRDSTSGTGHCKSC 71
Score = 45.1 bits (92), Expect(4) = 2e-046
Identities = 14/18 (77%), Positives = 18/18 (100%)
Frame = +1 / +3
Query: 1099 VAKGWAGIQAIPRTVWLD 1152
V+KGWAG+QA+PRT+WLD
Sbjct: 3 VSKGWAGLQAVPRTIWLD 56
Score = 40.5 bits (82), Expect(4) = 8e-021
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -1 / -2
Query: 1475 KNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
KNTAV S + EA T+SPNGP L + PH
Sbjct: 379 KNTAVRSFKSLEAKTNSPNGPPTVLAAEPIRPH 281
Score = 24.9 bits (48), Expect(4) = 8e-021
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1 / -2
Query: 1151 SSHTVLGMAWIPAQPLAT 1098
SS VLG A PAQPL T
Sbjct: 55 SSQIVLGTA*RPAQPLLT 2
>gb|DT636133.1|DT636133 EST1151064 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGO37 3' end, mRNA sequence
Length = 870
Score = 105 bits (224), Expect(4) = 2e-045
Identities = 41/62 (66%), Positives = 47/62 (75%)
Frame = +1 / +1
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQ 1167
LRYDYG FYASKTF+D K RILWGW NESD+ DD+ KGWA +QAIPR V LDP ++
Sbjct: 232 LRYDYGKFYASKTFFDDNKSLRILWGWINESDSLVDDLNKGWASLQAIPRVVRLDPLTRR 411
Query: 1168 LL 1173
L
Sbjct: 412 SL 417
Score = 63.4 bits (132), Expect(4) = 2e-045
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +1 / +1
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDD 966
GP VKHVLKNSLD + DYYTVG Y P+ +RY+PD+
Sbjct: 100 GPSVKHVLKNSLDNTKVDYYTVGHYLPQLDRYLPDN 207
Score = 42.8 bits (87), Expect(4) = 2e-045
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +1 / +1
Query: 775 TGMWECPDFYPVSKGGAPRAGLETSVP 855
TGMWECPDFYPVS G+ T+ P
Sbjct: 25 TGMWECPDFYPVSLYGSHGLDTSTTGP 105
Score = 38.2 bits (77), Expect(4) = 2e-045
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1 / +1
Query: 1420 FGLWVLASANRKERTAVFFRVFK 1488
FGL VLAS + KER+AVFF+ FK
Sbjct: 652 FGLMVLASDDLKERSAVFFKTFK 720
>gb|CO198745.1|CO198745 GEO1_16_E03.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_16_E03_A029 3', mRNA sequence
Length = 724
Score = 103 bits (219), Expect(4) = 4e-045
Identities = 36/59 (61%), Positives = 43/59 (72%)
Frame = +1 / -2
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
LRYDYG +YASK+FYDP K RRILWGW E+D+ D+ KGWA +Q IPR +W D K
Sbjct: 687 LRYDYGKYYASKSFYDPVKERRILWGWVGETDSEQADLRKGWASLQTIPRHIWFDNKTK 511
Score = 48.3 bits (99), Expect(4) = 4e-045
Identities = 17/47 (36%), Positives = 33/47 (70%)
Frame = +1 / -2
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFE 1308
++QWPIEE++ LR+ ++ ++N +++ G V+V + AQ D+E+ E
Sbjct: 504 IIQWPIEEIDELRSGALVVENVLLQPGSVVKVNTTEAAQLDIELVIE 364
Score = 44.6 bits (91), Expect(4) = 4e-045
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +1 / -2
Query: 1597 ISNGKISLRSLIDRSVVESFGAGGKTCILSR 1689
++N IS+R+L+D S+VES+ GG+ CI SR
Sbjct: 93 LANESISVRTLVDHSIVESYAQGGRRCITSR 1
Score = 43.7 bits (89), Expect(4) = 4e-045
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +1 / -2
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
RG +GPFGL V+A N E+TAV+F V K A G
Sbjct: 282 RGVLGPFGLLVIAEKNLTEQTAVYFYVVKSADG 184
>gb|CF478060.1|CF478060 RTWW3_17_H12.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_17_H12_A022 5', mRNA sequence
Length = 665
Score = 102 bits (217), Expect(4) = 5e-045
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1 / +3
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
LR DYG +YASK+FYDP K+RRILWGW E+D+ +D+ KGWA +Q +PR VW D K
Sbjct: 99 LRIDYGKYYASKSFYDPLKQRRILWGWVGETDSEQNDLRKGWASLQTVPRAVWFDDKTK 275
Score = 56.1 bits (116), Expect(4) = 5e-045
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +1 / +3
Query: 1150 DPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSA 1323
D + ++QWPIEE++ LR+ + ++N +++ G VEV AQ D+E++FE +A
Sbjct: 264 DKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQLDIELAFEFPDAA 437
Score = 40.5 bits (82), Expect(4) = 5e-045
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1 / +3
Query: 1405 GGVGPFGLWVLASANRKERTAVFFRVFKPA 1494
G +GPFGL VLA N E+TAV+F V K A
Sbjct: 504 GRLGPFGLLVLAEKNLTEQTAVYFYVAKSA 593
Score = 40.5 bits (82), Expect(4) = 5e-045
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1 / +3
Query: 910 DYYTVGTYHPRAERYVPDDPAGD 978
DYY +GTY +R+VPDDPA D
Sbjct: 18 DYYAIGTYDLEKQRFVPDDPALD 86
>gb|DR686509.1|DR686509 EST1076587 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABG81 3' end, mRNA sequence
Length = 728
Score = 73.9 bits (155), Expect(5) = 9e-044
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1 / +2
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
QVQN+A+P++ SDPLLR+WVK NPV+VP I FRDP+T W G
Sbjct: 137 QVQNLAFPEDPSDPLLRKWVKSEANPVLVPPKEIGTKDFRDPSTGWIG 280
Score = 70.3 bits (147), Expect(5) = 9e-044
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1 / +2
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDV 1101
LR DYG +YASK+FYDP K+RRILWGW E+D+ +D+
Sbjct: 611 LRIDYGKYYASKSFYDPLKQRRILWGWVGETDSEQNDL 724
Score = 56.1 bits (116), Expect(5) = 9e-044
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1 / +2
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
G VKHVLK S D + DYY +GTY +R+VPDDPA D
Sbjct: 479 GVGVKHVLKASFDDDKNDYYAIGTYDLEKQRFVPDDPALD 598
Score = 35.0 bits (70), Expect(5) = 9e-044
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DF+PV+ G
Sbjct: 404 TGMWECVDFFPVAVSG 451
Score = 26.7 bits (52), Expect(5) = 9e-044
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 355 NWVALEPALRPSIPGDRYGCWSGSATVL 438
+W L+ A+ P D G W+GSAT L
Sbjct: 2 HWFYLDLAMIPDRWYDINGVWTGSATFL 85
>gb|DR102156.1|DR102156 STRR1_78_H02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_78_H02_A033 5', mRNA sequence
Length = 603
Score = 129 bits (276), Expect(3) = 4e-043
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +1 / +2
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 375
RT YHFQP K+W+NDPNAP++YKG+YH FYQYNPK AVWG I+W H+VSRDLINWV L
Sbjct: 137 RTAYHFQPVKHWMNDPNAPLFYKGYYHLFYQYNPKSAVWGLIMWGHAVSRDLINWVHLAG 316
Query: 376 A 378
A
Sbjct: 317 A 319
Score = 75.8 bits (159), Expect(4) = 4e-024
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = -1 / -1
Query: 383 LSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKWY 204
++A + TQ MRS +T C H M PHTA LGLYW* K PL* GALGS IQ L G K Y
Sbjct: 324 MAAPAKCTQFMRSLETACPHMMSPHTADLGLYW*NK***PL*NNGALGSFIQCLTG*K*Y 145
Query: 203 PVL 195
VL
Sbjct: 144 AVL 136
Score = 50.6 bits (104), Expect(3) = 4e-043
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +1 / +2
Query: 487 DINYQVQNVAYPKNVSDPLLREWVKPSHNPVIVPEG 594
+++ QVQ +A PK+ SDPLLREW K NP+++P G
Sbjct: 425 NVSEQVQAMAVPKDPSDPLLREWKKIPKNPIMLPTG 532
Score = 40.9 bits (83), Expect(4) = 4e-024
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -1 / -1
Query: 473 PVYMITGPPPSGSTVADPDQQPYLS 399
PVY ITG PP S VADPDQ P S
Sbjct: 417 PVYKITGTPPLCSKVADPDQAPLTS 343
Score = 35.4 bits (71), Expect(3) = 4e-043
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1 / +2
Query: 595 GINATQFRDPTTAWRG 642
GINA+ F+DPTTAW G
Sbjct: 530 GINASSFKDPTTAWLG 577
Score = 28.6 bits (56), Expect(4) = 4e-024
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / -1
Query: 593 PSGTMTGLCEGFTHSRSSGSDTFFGYA 513
P G+M G F HSR+ GSD G A
Sbjct: 531 PVGSMIGFFGIFFHSRNKGSDGSLGTA 451
Score = 22.6 bits (43), Expect(4) = 4e-024
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / -1
Query: 641 PRQAVVGSRNCVALMP 594
P AVVGS +ALMP
Sbjct: 576 PSHAVVGSLKELALMP 529
>gb|CF400266.1|CF400266 RTWW1_4_E08.b1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_4_E08_A015 3', mRNA sequence
Length = 695
Score = 62.5 bits (130), Expect(6) = 7e-041
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +1 / -3
Query: 1045 RRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
R ILWGW E+D+ +D+ KGWA +Q +PR VW D K
Sbjct: 336 REEILWGWVGETDSEQNDLRKGWASLQTVPRAVWFDDKTK 217
Score = 56.1 bits (116), Expect(6) = 7e-041
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1 / -2
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
G VKHVLK S D + DYY +GTY +R+VPDDPA D
Sbjct: 526 GVGVKHVLKASFDDDKNDYYAIGTYDLEKQRFVPDDPALD 407
Score = 45.1 bits (92), Expect(6) = 7e-041
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1 / -2
Query: 988 LRYDYGNFYASKTFYDPAKRRR 1053
LR DYG +YASK+FYDP K+RR
Sbjct: 394 LRIDYGKYYASKSFYDPLKQRR 329
Score = 37.3 bits (75), Expect(6) = 7e-041
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1 / -3
Query: 1150 DPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAG 1248
D + ++QWPIEE++ LR+ + ++N +++ G
Sbjct: 228 DKTKTNIIQWPIEEIDELRSVELVVENELLRPG 130
Score = 35.0 bits (70), Expect(6) = 7e-041
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DF+PV+ G
Sbjct: 601 TGMWECVDFFPVAVSG 554
Score = 23.5 bits (45), Expect(6) = 7e-041
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1 / -1
Query: 1255 VEVTGIQTAQADVEVSFEVSPSA 1323
VEV AQ D+E++FE +A
Sbjct: 122 VEVGATDGAQLDIELAFEFPDAA 54
>gb|DR023588.1|DR023588 STRS1_58_E09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_58_E09_A034 5', mRNA sequence
Length = 576
Score = 102 bits (218), Expect(3) = 2e-040
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +1 / +3
Query: 250 PMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSA 429
P+ YKGWYH FYQYNP AVWGNI W H+VS+DL++W L+ A+ P D G W+GSA
Sbjct: 6 PLVYKGWYHLFYQYNPVSAVWGNIAWGHAVSKDLVHWFYLDLAMIPDRWYDINGVWTGSA 185
Query: 430 TVL 438
T L
Sbjct: 186 TFL 194
Score = 73.9 bits (155), Expect(3) = 2e-040
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1 / +3
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
QVQN+A+P++ SDPLLR+WVK NPV+VP I FRDP+T W G
Sbjct: 246 QVQNLAFPEDPSDPLLRKWVKSEANPVLVPPKEIGTKDFRDPSTGWIG 389
Score = 35.0 bits (70), Expect(3) = 2e-040
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DF+PV+ G
Sbjct: 513 TGMWECVDFFPVAVSG 560
>gb|CF471271.1|CF471271 RTDS1_2_E09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_2_E09_A015 5', mRNA sequence
Length = 614
Score = 76.2 bits (160), Expect(4) = 3e-040
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +1 / +1
Query: 1057 LWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLL 1173
LWGW NESD+ +DD++KGWAG+QAIPRT+WLD + + L
Sbjct: 1 LWGWINESDSVSDDISKGWAGVQAIPRTIWLDSATRTWL 117
Score = 64.8 bits (135), Expect(4) = 3e-040
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +1 / +1
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEV 1311
LLQWP+ EVEALR K + +N + +G VE+ GI AQ DVEVSF++
Sbjct: 115 LLQWPVSEVEALRRKKILKRNIDLSSGSVVEIAGINAAQVDVEVSFDL 258
Score = 47.8 bits (98), Expect(4) = 3e-040
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +1 / +1
Query: 1366 AERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFK 1488
A++LC + R VGPFGL VLAS + ERTAVFF++ +
Sbjct: 310 AQQLCSRMGSAARTVVGPFGLLVLASKDLNERTAVFFQIVR 432
Score = 34.5 bits (69), Expect(4) = 3e-040
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1 / +1
Query: 1612 ISLRSLIDRSVVESFGAGG 1668
+SLR L+D S+VESFG GG
Sbjct: 556 LSLRVLVDHSIVESFGEGG 612
>gb|DR024426.1|DR024426 STRS1_64_H04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_64_H04_A034 5', mRNA sequence
Length = 815
Score = 99.1 bits (210), Expect(3) = 2e-039
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = +1 / +3
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEM 1788
+SLR L+D S+VESFG GGK CI +RVYP+LAI KDA LYVFNNG + V ++ TAWEM
Sbjct: 504 LSLRVLVDHSIVESFGEGGKVCITARVYPTLAIDKDAHLYVFNNGTSTVTATKFTAWEM 680
Score = 61.6 bits (128), Expect(3) = 2e-039
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +1 / +3
Query: 1165 QLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSALAGAE 1338
QLLQWP+ EVE+LR K + ++ + +G VE+ G+ AQ DVEVSF++ +A E
Sbjct: 60 QLLQWPVPEVESLRRKEIYKQSIDLSSGSVVEIAGLNAAQVDVEVSFDLPRLEIAEFE 233
Score = 48.7 bits (100), Expect(3) = 2e-039
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +1 / +3
Query: 1366 AERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFK 1488
A++LCG + R GPFGL+VLAS + ERTAVFF++ +
Sbjct: 258 AQQLCGRMGSAARTVGGPFGLFVLASKDLNERTAVFFQIVR 380
>gb|CO364064.1|CO364064 RTK1_13_A12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_13_A12_A029 5', mRNA sequence
Length = 844
Score = 79.0 bits (166), Expect(4) = 7e-038
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +1 / +2
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMK 1791
IS+R+L+D S+VES+ GG+ CI SRVYP+ ++ A+L++FNN A VKV L W M
Sbjct: 506 ISVRTLVDHSIVESYAQGGRRCITSRVYPTRSLNGAAKLFLFNNATAAVKVQSLNVWHMD 685
Query: 1792 KPVMN 1806
M+
Sbjct: 686 SVSMH 700
Score = 56.1 bits (116), Expect(4) = 7e-038
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +1 / +2
Query: 1150 DPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSA 1323
D + ++QWPIEE++ LR+ + ++N +++ G VEV AQ D+E++FE +A
Sbjct: 62 DKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQLDIELAFEFPDAA 235
Score = 44.6 bits (91), Expect(4) = 7e-038
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +1 / +2
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
RG +GPFGL VLA N E+TAV+F V K A G
Sbjct: 299 RGRLGPFGLLVLAEKNLTEQTAVYFYVAKSADG 397
Score = 35.4 bits (71), Expect(4) = 7e-038
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1 / +2
Query: 1105 KGWAGIQAIPRTVWLDPSGK 1164
KGWA +Q +PR VW D K
Sbjct: 14 KGWASLQTVPRAVWFDDKTK 73
>gb|CV034926.1|CV034926 RTNACL1_12_B09.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_12_B09_A029 5', mRNA sequence
Length = 611
Score = 101 bits (216), Expect(3) = 2e-037
Identities = 40/59 (67%), Positives = 47/59 (79%)
Frame = +1 / +3
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEM 1788
+SLR L+D S+VESFG GGK CI +R YP+LAIGKDA LY FNNG + V S+LTAWEM
Sbjct: 429 LSLRVLVDHSIVESFGEGGKACITARAYPTLAIGKDAHLYAFNNGTSTVTASKLTAWEM 605
Score = 52.4 bits (108), Expect(3) = 2e-037
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1 / +3
Query: 1183 IEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSALAGAE 1338
+ EVEALR K + +N +++G VE+ G+ AQ DVEVSF++ + +A E
Sbjct: 3 VSEVEALRRKKTSKQNLHLRSGSVVEIAGVNAAQVDVEVSFDLPRAEIAEFE 158
Score = 47.8 bits (98), Expect(3) = 2e-037
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +1 / +3
Query: 1366 AERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFK 1488
A++LC + R VGPFGL VLAS + ERTAVFF++ +
Sbjct: 183 AQQLCSQLGSAARTVVGPFGLLVLASKDLNERTAVFFQIVR 305
>gb|CO363936.1|CO363936 RTK1_12_E03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_12_E03_A029 5', mRNA sequence
Length = 818
Score = 82.2 bits (173), Expect(4) = 1e-036
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +1 / +2
Query: 1597 ISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLT 1776
++N IS+R+L+D S+VES+ GG+ CI SRVYP+ A+ A+L++FNN VKV L
Sbjct: 497 LANESISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTAVKVQSLN 676
Query: 1777 AWEMK 1791
W+M+
Sbjct: 677 VWQME 691
Score = 48.3 bits (99), Expect(4) = 1e-036
Identities = 17/47 (36%), Positives = 33/47 (70%)
Frame = +1 / +2
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFE 1308
++QWPIEE++ LR+ ++ ++N +++ G V+V + AQ D+E+ E
Sbjct: 86 IIQWPIEEIDELRSGALVVENVLLQPGSVVKVNTTEAAQLDIELVIE 226
Score = 43.7 bits (89), Expect(4) = 1e-036
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +1 / +2
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
RG +GPFGL V+A N E+TAV+F V K A G
Sbjct: 308 RGVLGPFGLLVIAEKNLTEQTAVYFYVVKSADG 406
Score = 36.8 bits (74), Expect(4) = 1e-036
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1 / +2
Query: 1096 DVAKGWAGIQAIPRTVWLDPSGK 1164
D+ KGWA +Q IPR +W D K
Sbjct: 11 DLRKGWASLQTIPRHIWFDNKTK 79
>gb|DR167118.1|DR167118 RTPHOS1_16_G01.g1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_16_G01_A029 5', mRNA sequence
Length = 711
Score = 79.0 bits (166), Expect(4) = 6e-035
Identities = 30/65 (46%), Positives = 45/65 (69%)
Frame = +1 / +3
Query: 1597 ISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLT 1776
++N IS+R+L+D S+VES+ GG+ CI SRVYP+ A+ A+L++ NN VKV L
Sbjct: 489 LANESISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLVNNATTAVKVQSLN 668
Query: 1777 AWEMK 1791
W+M+
Sbjct: 669 VWQME 683
Score = 48.3 bits (99), Expect(4) = 6e-035
Identities = 17/47 (36%), Positives = 33/47 (70%)
Frame = +1 / +3
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFE 1308
++QWPIEE++ LR+ ++ ++N +++ G V+V + AQ D+E+ E
Sbjct: 78 IIQWPIEEIDELRSGALVVENVLLQPGSVVKVNTTEAAQLDIELVIE 218
Score = 43.7 bits (89), Expect(4) = 6e-035
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +1 / +3
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
RG +GPFGL V+A N E+TAV+F V K A G
Sbjct: 300 RGVLGPFGLLVIAEKNLTEQTAVYFYVVKSADG 398
Score = 34.1 bits (68), Expect(4) = 6e-035
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 1105 KGWAGIQAIPRTVWLDPSGK 1164
KGWA +Q IPR +W D K
Sbjct: 12 KGWASLQTIPRHIWFDNKTK 71
>gb|AW754747.1|AW754747 PC07D06 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC07D06, mRNA sequence
Length = 503
Score = 149 bits (320), Expect = 6e-035
Identities = 55/81 (67%), Positives = 64/81 (79%)
Frame = +1 / +3
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 375
RT YHFQP KNW+NDPNAPM+YKG+YH FYQYNP GAVWGNIVW H V +DLI+W +L+P
Sbjct: 252 RTAYHFQPQKNWMNDPNAPMFYKGFYHLFYQYNPYGAVWGNIVWGHVVPKDLIHWRSLDP 431
Query: 376 ALRPSIPGDRYGCWSGSATVL 438
A+ PS D GC GSA +L
Sbjct: 432 AIVPSE*YDIKGCXXGSAXLL 494
Score = 106 bits (226), Expect = 6e-022
Identities = 49/87 (56%), Positives = 57/87 (65%)
Frame = -1 / -2
Query: 437 STVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYHPL* 258
S A+P QQP++S LG AGSS Q MRS T C T+ PHTAP GLYW*K+W +PL*
Sbjct: 493 SNXAEPXQQPFISYYSLGTMAGSSERQ*MRSFGTTCPQTIFPHTAP*GLYW*KRW*NPL* 314
Query: 257 YMGALGSLIQFLGGWKWYPVLSRGLTM 177
+GALGS IQF G KW V R T+
Sbjct: 313 NIGALGSFIQFFWG*KW*AVRYRCSTL 233
>gb|CF478906.1|CF478906 RTWW3_15_B04.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_15_B04_A022 5', mRNA sequence
Length = 472
Score = 96.8 bits (205), Expect(3) = 1e-034
Identities = 33/49 (67%), Positives = 42/49 (85%)
Frame = +1 / +3
Query: 976 DEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGI 1122
DE+ LRYDYG FYASK+F+D K+RRILWGW NESD+ +DD+ KGW+G+
Sbjct: 324 DENGLRYDYGKFYASKSFFDQHKQRRILWGWVNESDSVSDDITKGWSGL 470
Score = 56.5 bits (117), Expect(3) = 1e-034
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +1 / +3
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDD 966
G +KHVLK SLD +YDYYTVGTY +RYVPD+
Sbjct: 222 GHSLKHVLKVSLDDYKYDYYTVGTYLQDRDRYVPDE 329
Score = 33.1 bits (66), Expect(3) = 1e-034
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 775 TGMWECPDFYP 807
T MWECPDFYP
Sbjct: 147 TRMWECPDFYP 179
>gb|DR092942.1|DR092942 STRR1_5_C02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_C02_A033 3', mRNA sequence
Length = 890
Score = 100 bits (214), Expect(3) = 5e-033
Identities = 39/96 (40%), Positives = 63/96 (65%)
Frame = +1 / +2
Query: 1513 VLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRV 1692
V +C D ++S+ ++ + ++ GFV +SLR L+D S+VESF GG+TCI SR
Sbjct: 350 VALCVDQSRSTLQVDVDKTSYGGFVSVKPHQRSLSLRVLVDHSIVESFAEGGRTCITSRS 529
Query: 1693 YPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPV 1800
YP+LA+ ++A L+VFN ++ + + RL+AW MK +
Sbjct: 530 YPTLAVNENAHLFVFNYNKSPLLLRRLSAWHMKTSI 637
Score = 40.5 bits (82), Expect(3) = 5e-033
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +1 / +2
Query: 1162 KQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFE 1308
+ L QWP+ E+E+LRA +V + V++ ++V G + A V+V E
Sbjct: 8 RSLFQWPVPELESLRAYNVRKDHVVLERESVMKVEGFNSGAAQVDVEVE 154
Score = 39.6 bits (80), Expect(3) = 5e-033
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1 / +2
Query: 1420 FGLWVLASANRKERTAVFFRVFK 1488
FGL VLAS + KER+AVFF++FK
Sbjct: 251 FGLMVLASDDLKERSAVFFKIFK 319
>gb|DR023520.1|DR023520 STRS1_58_E09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_58_E09_A034 3', mRNA sequence
Length = 876
Score = 79.0 bits (166), Expect(3) = 3e-032
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +1 / +1
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMK 1791
IS+R+L+D S+VES+ GG+ CI SRVYP+ ++ A+L++FNN A VKV L W M
Sbjct: 460 ISVRTLVDHSIVESYAQGGRRCITSRVYPTRSLNGAAKLFLFNNATAAVKVQSLNVWHMD 639
Query: 1792 KPVMN 1806
M+
Sbjct: 640 SVSMH 654
Score = 56.1 bits (116), Expect(3) = 3e-032
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +1 / +1
Query: 1150 DPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSA 1323
D + ++QWPIEE++ LR+ + ++N +++ G VEV AQ D+E++FE +A
Sbjct: 16 DKTKTNIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQLDIELAFEFPDAA 189
Score = 43.2 bits (88), Expect(3) = 3e-032
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +1 / +1
Query: 1393 ADVRGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
A RG +GPFGL VLA N E+TAV+F V K G
Sbjct: 244 ASGRGRLGPFGLLVLAEKNLTEQTAVYFYVAKSTDG 351
>gb|CF471267.1|CF471267 RTDS1_2_E05.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_2_E05_A015 5', mRNA sequence
Length = 712
Score = 70.7 bits (148), Expect(4) = 1e-031
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +1 / +3
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMK 1791
IS+R+L+D S+VES+ GG+ CI SRVYP+ ++ A+L++ +N A VK L W M
Sbjct: 486 ISVRTLVDHSIVESYAQGGRRCITSRVYPTRSLNGAAKLFLXHNATAAVKSQSLNVWHMD 665
Query: 1792 KPVMN 1806
M+
Sbjct: 666 SVSMH 680
Score = 54.7 bits (113), Expect(4) = 1e-031
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +1 / +3
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSA 1323
++QWPIEE++ LR+ + ++N +++ G VEV AQ D+E++FE +A
Sbjct: 60 IIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDGAQLDIELAFEFPDAA 215
Score = 42.8 bits (87), Expect(4) = 1e-031
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1 / +3
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
RG +GPFGL VLA N E+TAV+F V K G
Sbjct: 279 RGRLGPFGLLVLAEKNLTEQTAVYFYVAKSTDG 377
Score = 25.8 bits (50), Expect(4) = 1e-031
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1 / +1
Query: 1114 AGIQAIPRTVWLDPSGKQL 1170
A +Q +PR VW D K +
Sbjct: 4 ASLQTVPRAVWFDDKTKTI 60
>gb|DR022623.1|DR022623 STRS1_52_G08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_52_G08_A034 3', mRNA sequence
Length = 863
Score = 82.2 bits (173), Expect(3) = 5e-031
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +1 / -2
Query: 1597 ISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLT 1776
++N IS+R+L+D S+VES+ GG+ CI SRVYP+ A+ A+L++FNN VKV L
Sbjct: 397 LANESISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTAVKVQSLN 218
Query: 1777 AWEMK 1791
W+M+
Sbjct: 217 VWQME 203
Score = 48.3 bits (99), Expect(3) = 5e-031
Identities = 17/47 (36%), Positives = 33/47 (70%)
Frame = +1 / -2
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFE 1308
++QWPIEE++ LR+ ++ ++N +++ G V+V + AQ D+E+ E
Sbjct: 808 IIQWPIEEIDELRSGALVVENVLLQPGSVVKVNTTEAAQLDIELVIE 668
Score = 43.7 bits (89), Expect(3) = 5e-031
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +1 / -2
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
RG +GPFGL V+A N E+TAV+F V K A G
Sbjct: 586 RGVLGPFGLLVIAEKNLTEQTAVYFYVVKSADG 488
>gb|DR117697.1|DR117697 RTMG1_8_C08.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_8_C08_A029 5', mRNA sequence
Length = 872
Score = 82.2 bits (173), Expect(3) = 9e-030
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +1 / +1
Query: 1597 ISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLT 1776
++N IS+R+L+D S+VES+ GG+ CI SRVYP+ A+ A+L++FNN VKV L
Sbjct: 403 LANESISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTAVKVQSLN 582
Query: 1777 AWEMK 1791
W+M+
Sbjct: 583 VWQME 597
Score = 44.1 bits (90), Expect(3) = 9e-030
Identities = 16/44 (36%), Positives = 30/44 (68%)
Frame = +1 / +1
Query: 1177 WPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFE 1308
WPIEE++ LR+ ++ ++N +++ G V+V + AQ D+E+ E
Sbjct: 1 WPIEEIDELRSVALVVENVLLQPGSVVKVNTTEAAQLDIELVIE 132
Score = 43.7 bits (89), Expect(3) = 9e-030
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +1 / +1
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
RG +GPFGL V+A N E+TAV+F V K A G
Sbjct: 214 RGVLGPFGLLVIAEKNLTEQTAVYFYVVKSADG 312
>gb|DR177096.1|DR177096 RTMNUT1_3_C06.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_C06_A029 3', mRNA sequence
Length = 753
Score = 95.5 bits (202), Expect(3) = 9e-028
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = +1 / +3
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEM 1788
+SLR L+D S+VESF GGK CI +R YP+LAIG+DA LYVFNNG + V ++L AWEM
Sbjct: 231 LSLRVLVDHSIVESFAEGGKACITARAYPTLAIGEDAHLYVFNNGTSSVTATKLIAWEM 407
Score = 38.6 bits (78), Expect(3) = 9e-028
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1 / +3
Query: 1411 VGPFGLWVLASANRKERTAVFFRVFK 1488
VGPFGL VLAS + ERTAVF ++ +
Sbjct: 30 VGPFGLLVLASKDLNERTAVFXQIVR 107
Score = 29.0 bits (57), Expect(3) = 9e-028
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1 / +3
Query: 1513 VLMCTDPTKSSQNPNLYRPTFAGFVD 1590
VLMC+D ++SS +L + T+ FV+
Sbjct: 126 VLMCSDQSRSSLKNDLDKTTYGAFVN 203
>gb|DR098925.1|DR098925 STRR1_48_G02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_48_G02_A033 5', mRNA sequence
Length = 537
Score = 67.5 bits (141), Expect(3) = 1e-026
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +1 / +3
Query: 1036 PAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
P K RRILWGW E+D+ D+ KGWA +Q IPR +W D K
Sbjct: 3 PVKERRILWGWVGETDSEQADLRKGWASLQTIPRHIWFDNKTK 131
Score = 48.3 bits (99), Expect(3) = 1e-026
Identities = 17/47 (36%), Positives = 33/47 (70%)
Frame = +1 / +3
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFE 1308
++QWPIEE++ LR+ ++ ++N +++ G V+V + AQ D+E+ E
Sbjct: 138 IIQWPIEEIDELRSGALVVENVLLQPGSVVKVNTTEAAQLDIELVIE 278
Score = 43.7 bits (89), Expect(3) = 1e-026
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +1 / +3
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
RG +GPFGL V+A N E+TAV+F V K A G
Sbjct: 360 RGVLGPFGLLVIAEKNLTEQTAVYFYVVKSADG 458
>gb|DR102090.1|DR102090 STRR1_78_H02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_78_H02_A033 3', mRNA sequence
Length = 869
Score = 100 bits (214), Expect(2) = 3e-026
Identities = 39/96 (40%), Positives = 63/96 (65%)
Frame = +1 / +3
Query: 1513 VLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRV 1692
V +C D ++S+ ++ + ++ GFV +SLR L+D S+VESF GG+TCI SR
Sbjct: 324 VALCVDQSRSTLQVDVDKTSYGGFVSVKPHQRSLSLRVLVDHSIVESFAEGGRTCITSRS 503
Query: 1693 YPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPV 1800
YP+LA+ ++A L+VFN ++ + + RL+AW MK +
Sbjct: 504 YPTLAVNENAHLFVFNYNKSPLLLRRLSAWHMKTSI 611
Score = 39.6 bits (80), Expect(2) = 3e-026
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1 / +3
Query: 1420 FGLWVLASANRKERTAVFFRVFK 1488
FGL VLAS + KER+AVFF++FK
Sbjct: 225 FGLMVLASDDLKERSAVFFKIFK 293
>gb|DR098625.1|DR098625 STRR1_46_G04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_46_G04_A033 5', mRNA sequence
Length = 733
Score = 100 bits (214), Expect(2) = 3e-026
Identities = 39/96 (40%), Positives = 63/96 (65%)
Frame = +1 / -3
Query: 1513 VLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRV 1692
V +C D ++S+ ++ + ++ GFV +SLR L+D S+VESF GG+TCI SR
Sbjct: 506 VALCVDQSRSTLQVDVDKTSYGGFVSVKPHQRSLSLRVLVDHSIVESFAEGGRTCITSRS 327
Query: 1693 YPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPV 1800
YP+LA+ ++A L+VFN ++ + + RL+AW MK +
Sbjct: 326 YPTLAVNENAHLFVFNYNKSPLLLRRLSAWHMKTSI 219
Score = 39.6 bits (80), Expect(2) = 3e-026
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1 / -3
Query: 1420 FGLWVLASANRKERTAVFFRVFK 1488
FGL VLAS + KER+AVFF++FK
Sbjct: 605 FGLMVLASDDLKERSAVFFKIFK 537
>gb|DR096032.1|DR096032 STRR1_25_G03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_25_G03_A033 3', mRNA sequence
Length = 691
Score = 100 bits (214), Expect(2) = 3e-026
Identities = 39/96 (40%), Positives = 63/96 (65%)
Frame = +1 / -1
Query: 1513 VLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRV 1692
V +C D ++S+ ++ + ++ GFV +SLR L+D S+VESF GG+TCI SR
Sbjct: 541 VALCVDQSRSTLQVDVDKTSYGGFVSVKPHQRSLSLRVLVDHSIVESFAEGGRTCITSRS 362
Query: 1693 YPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPV 1800
YP+LA+ ++A L+VFN ++ + + RL+AW MK +
Sbjct: 361 YPTLAVNENAHLFVFNYNKSPLLLRRLSAWHMKTSI 254
Score = 39.6 bits (80), Expect(2) = 3e-026
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1 / -1
Query: 1420 FGLWVLASANRKERTAVFFRVFK 1488
FGL VLAS + KER+AVFF++FK
Sbjct: 640 FGLMVLASDDLKERSAVFFKIFK 572
>gb|DR096113.1|DR096113 STRR1_25_G03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_25_G03_A033 5', mRNA sequence
Length = 643
Score = 100 bits (214), Expect(2) = 3e-026
Identities = 39/96 (40%), Positives = 63/96 (65%)
Frame = +1 / -3
Query: 1513 VLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRV 1692
V +C D ++S+ ++ + ++ GFV +SLR L+D S+VESF GG+TCI SR
Sbjct: 497 VALCVDQSRSTLQVDVDKTSYGGFVSVKPHQRSLSLRVLVDHSIVESFAEGGRTCITSRS 318
Query: 1693 YPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPV 1800
YP+LA+ ++A L+VFN ++ + + RL+AW MK +
Sbjct: 317 YPTLAVNENAHLFVFNYNKSPLLLRRLSAWHMKTSI 210
Score = 39.6 bits (80), Expect(2) = 3e-026
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1 / -3
Query: 1420 FGLWVLASANRKERTAVFFRVFK 1488
FGL VLAS + KER+AVFF++FK
Sbjct: 596 FGLMVLASDDLKERSAVFFKIFK 528
>gb|BQ695773.1|BQ695773 NXPV_032_E07_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_032_E07 5' similar to Arabidopsis
thaliana sequence At2g36190 beta-fructofuranosidase like
protein (invertase) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 486
Score = 99.6 bits (211), Expect(2) = 4e-025
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +1 / +1
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQ 1167
LRYDYG FYASKTF+DP K RRILWGW NESD+ A K WA +QA P+ V DP K+
Sbjct: 1 LRYDYGKFYASKTFFDPRKSRRILWGWXNESDSVAXXXNKQWASLQANPKVVXXDPPTKR 180
Query: 1168 LL 1173
L
Sbjct: 181 NL 186
Score = 36.8 bits (74), Expect(2) = 4e-025
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1 / +1
Query: 1153 PSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEV 1299
P+ + L QWP+ ++E+LRA +V V++ ++V G + A V+V
Sbjct: 169 PTKRNLFQWPMPKLESLRAYNVRKDYVVLERESVMKVEGFNSRTAQVDV 315
>gb|DT633444.1|DT633444 EST1148375 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFU95 3' end, mRNA sequence
Length = 470
Score = 73.9 bits (155), Expect(2) = 4e-025
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
QVQN+A+P++ SDPLLR+WVK NPV+VP I FRDP+T W G
Sbjct: 202 QVQNLAFPEDPSDPLLRKWVKSEANPVLVPPKEIGTKDFRDPSTGWIG 345
Score = 62.5 bits (130), Expect(2) = 4e-025
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +1 / +1
Query: 304 AVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVL 438
AVWGNI W H+VS+DL++W L+ A+ P D G W+GSAT L
Sbjct: 16 AVWGNIAWGHAVSKDLVHWFYLDLAMIPDRWYDINGVWTGSATFL 150
>gb|CF671389.1|CF671389 RTCNT1_56_F07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_56_F07_A029 5', mRNA sequence
Length = 749
Score = 79.0 bits (166), Expect(3) = 2e-024
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +1 / +1
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMK 1791
IS+R+L+D S+VES+ GG+ CI SRVYP+ ++ A+L++FNN A VKV L W M
Sbjct: 370 ISVRTLVDHSIVESYAQGGRRCITSRVYPTRSLNGAAKLFLFNNATAAVKVQSLNVWHMD 549
Query: 1792 KPVMN 1806
M+
Sbjct: 550 SVSMH 564
Score = 42.8 bits (87), Expect(3) = 2e-024
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 1402 RGGVGPFGLWVLASANRKERTAVFFRVFKPA 1494
RG +GPFGL VLA N E+TAV+F V K A
Sbjct: 163 RGRLGPFGLLVLAEKNLTEQTAVYFYVAKSA 255
Score = 30.4 bits (60), Expect(3) = 2e-024
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1 / +1
Query: 1225 KNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSA 1323
+N ++++G VEV AQ D+E++FE +A
Sbjct: 1 ENELLRSGSVVEVGATDGAQLDIELAFEFPDAA 99
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 862,510,385
Number of Sequences: 355925
Number of extensions: 12269944
Number of successful extensions: 65616
Number of sequences better than 1.0e-020: 63
length of database: 72,425,745
effective HSP length: 55
effective length of database: 52,849,870
effective search space used: 32766919400
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)