TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493531.2.1
(1061 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX648594.1|CX648594 COLD1_29_D11.g1_A029 Root cold Pinus... 188 2e-068
gb|DR742067.1|DR742067 RTCU1_1_B09.g1_A029 Roots plus added... 188 2e-068
gb|CF666895.1|CF666895 RTCNT1_26_G11.g1_A029 Root control P... 162 2e-059
gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pin... 159 3e-057
gb|DR163235.1|DR163235 RTFE1_41_E12.g1_A029 Roots minus iro... 188 3e-057
gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch ... 159 4e-057
gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed... 167 1e-056
gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control P... 167 1e-056
gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblo... 166 1e-056
gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from lobl... 166 1e-056
gb|DR099166.1|DR099166 STRR1_53_C12.g1_A033 Stem Response R... 159 1e-056
gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from lobl... 165 1e-056
gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch... 167 1e-056
gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response R... 167 1e-056
gb|DT636492.1|DT636492 EST1151423 Normalized pine embryo li... 157 2e-056
gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus... 165 2e-056
gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus mag... 165 2e-056
gb|CF386766.1|CF386766 RTDR1_16_C08.g1_A015 Loblolly pine r... 156 2e-056
gb|CF400637.1|CF400637 RTWW1_6_B06.g1_A015 Well-watered lob... 156 2e-056
gb|DR093057.1|DR093057 STRR1_5_F06.g1_A033 Stem Response Re... 156 2e-056
gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo li... 163 3e-056
gb|DR163745.1|DR163745 RTFE1_44_D12.g1_A029 Roots minus iro... 188 4e-056
gb|CO172418.1|CO172418 NDL1_29_D02.g1_A029 Needles control ... 188 4e-056
gb|CF402042.1|CF402042 RTWW1_16_F09.g1_A015 Well-watered lo... 153 5e-056
gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds 161 8e-056
gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine r... 163 8e-056
gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds 161 9e-056
gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds 161 1e-055
gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds 160 1e-055
gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus... 162 3e-055
gb|CO367410.1|CO367410 RTK1_34_D03.b1_A029 Roots minus pota... 165 3e-055
gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from lobl... 162 3e-055
gb|CX652556.1|CX652556 COLD1_59_H02.g1_A029 Root cold Pinus... 159 6e-055
gb|CO171305.1|CO171305 NDL1_20_C09.g1_A029 Needles control ... 162 7e-055
gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds 158 9e-055
gb|DT632413.1|DT632413 EST1147344 Normalized pine embryo li... 153 1e-054
gb|CX650703.1|CX650703 COLD1_47_B12.g1_A029 Root cold Pinus... 157 3e-054
gb|CO368748.1|CO368748 RTK1_42_C07.g1_A029 Roots minus pota... 160 3e-054
gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus... 148 5e-054
gb|DR097316.1|DR097316 STRR1_33_H05.g3_A033 Stem Response R... 158 1e-053
gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo li... 157 1e-053
gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for... 150 2e-053
gb|DR019211.1|DR019211 STRS1_28_B06.g1_A034 Shoot tip pitch... 160 5e-053
gb|CF475910.1|CF475910 RTWW2_15_D07.g1_A021 Well-watered lo... 188 7e-053
gb|CF400653.1|CF400653 RTWW1_6_A01.g1_A015 Well-watered lob... 160 7e-053
gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism... 154 8e-053
gb|DR096273.1|DR096273 STRR1_26_H05.g1_A033 Stem Response R... 144 1e-052
gb|DR098553.1|DR098553 STRR1_46_F12.b1_A033 Stem Response R... 159 4e-052
gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control P... 153 4e-052
gb|CV144435.1|CV144435 EST855644 Sequencing ESTs from loblo... 149 6e-052
gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus m... 150 7e-052
gb|CO367487.1|CO367487 RTK1_34_D03.g1_A029 Roots minus pota... 149 9e-052
gb|DR050310.1|DR050310 RTBOR1_22_D04.g1_A029 Roots plus add... 148 2e-051
gb|CO361435.1|CO361435 NDL2_4_G08.g1_A029 Needles control 2... 130 6e-051
gb|DR096360.1|DR096360 STRR1_27_B05.g1_A033 Stem Response R... 167 1e-050
gb|DR180723.1|DR180723 RTMNUT1_34_A06.g1_A029 Roots minus m... 120 2e-050
gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo li... 144 2e-050
gb|DR163481.1|DR163481 RTFE1_43_D12.b1_A029 Roots minus iro... 188 1e-049
gb|DR163147.1|DR163147 RTFE1_41_E12.b1_A029 Roots minus iro... 188 1e-049
gb|DR163657.1|DR163657 RTFE1_44_D12.b1_A029 Roots minus iro... 188 1e-049
gb|CO369598.1|CO369598 RTK1_48_F01.b1_A029 Roots minus pota... 158 1e-049
gb|DR093671.1|DR093671 STRR1_9_E07.g1_A033 Stem Response Re... 143 2e-049
gb|CO361349.1|CO361349 NDL2_4_G08.b1_A029 Needles control 2... 188 2e-049
gb|DR071475.1|DR071475 RTDK1_20_C09.b1_A029 Roots, dark Pin... 188 2e-049
gb|CO362158.1|CO362158 RTK1_1_E05.g1_A029 Roots minus potas... 159 3e-049
gb|BG039378.1|BG039378 NXSI_098_D11_F NXSI (Nsf Xylem Side ... 163 3e-049
gb|DT632636.1|DT632636 EST1147567 Normalized pine embryo li... 105 4e-049
gb|DR168662.1|DR168662 RTPHOS1_27_B09.b1_A029 Roots minus p... 171 5e-049
gb|DR055148.1|DR055148 RTCA1_21_G09.g2_A029 Roots minus cal... 132 5e-049
gb|DT631935.1|DT631935 EST1146866 Normalized pine embryo li... 162 6e-049
gb|DR683982.1|DR683982 EST1074058 Normalized pine embryo li... 162 6e-049
gb|DR070312.1|DR070312 RTDK1_12_C03.g1_A029 Roots, dark Pin... 138 3e-048
gb|CF476071.1|CF476071 RTWW2_16_D03.g1_A021 Well-watered lo... 162 5e-048
gb|DT639052.1|DT639052 EST1153983 Normalized pine embryo li... 117 4e-047
gb|CF475767.1|CF475767 RTWW2_15_D07.b1_A021 Well-watered lo... 188 4e-047
gb|DR054266.1|DR054266 RTCA1_16_F08.b1_A029 Roots minus cal... 188 4e-047
gb|BX254474.1|BX254474 BX254474 Pinus pinaster differenciat... 160 2e-046
gb|DR051531.1|DR051531 RTBOR1_30_E09.g1_A029 Roots plus add... 122 4e-046
gb|DR051834.1|DR051834 RTBOR1_32_E10.g1_A029 Roots plus add... 130 5e-046
gb|DR692432.1|DR692432 EST1082520 Normalized pine embryo li... 133 2e-045
gb|DR745029.1|DR745029 RTCU1_26_C03.g1_A029 Roots plus adde... 161 4e-045
gb|CF668487.1|CF668487 RTCNT1_36_F12.g1_A029 Root control P... 116 2e-044
gb|DR024833.1|DR024833 STRS1_67_F03.g1_A034 Shoot tip pitch... 116 2e-044
gb|DR011619.1|DR011619 HEAT1_6_G09.g1_A029 Root at 37 C for... 116 2e-044
gb|CF479898.1|CF479898 RTWW3_12_H04.g1_A022 Well-watered lo... 162 6e-044
gb|CO200976.1|CO200976 RTCNT2_2_G03.g1_A029 Root control 2 ... 159 7e-044
gb|DR072178.1|DR072178 RTDK1_24_C09.g1_A029 Roots, dark Pin... 159 8e-044
gb|CF386013.1|CF386013 RTDR1_7_F11.g1_A015 Loblolly pine ro... 113 2e-043
gb|DR165660.1|DR165660 RTPHOS1_6_B10.g1_A029 Roots minus ph... 165 6e-043
gb|CO201071.1|CO201071 RTCNT2_3_A06.g1_A029 Root control 2 ... 174 1e-042
gb|DR080162.1|DR080162 RTFEPL1_20_E11.g1_A029 Roots plus ad... 110 1e-042
gb|CF477384.1|CF477384 RTWW3_7_A01.g1_A022 Well-watered lob... 117 2e-042
gb|DR120161.1|DR120161 RTMG1_27_H07.g2_A029 Roots minus mag... 116 2e-042
gb|DT637181.1|DT637181 EST1152112 Normalized pine embryo li... 128 1e-041
gb|CO166169.1|CO166169 FLD1_59_G05.g1_A029 Root flooded Pin... 159 7e-041
gb|CF386668.1|CF386668 RTDR1_16_C08.b1_A015 Loblolly pine r... 167 9e-041
gb|CF471900.1|CF471900 RTDS1_7_A08.b1_A015 Drought-stressed... 167 1e-040
gb|CF668214.1|CF668214 RTCNT1_35_D04.b1_A029 Root control P... 167 1e-040
gb|DR168497.1|DR168497 RTPHOS1_25_G11.g1_A029 Roots minus p... 110 2e-040
gb|CX650764.1|CX650764 COLD1_48_A05.b1_A029 Root cold Pinus... 166 3e-040
gb|CF391890.1|CF391890 RTDR3_10_G01.g1_A022 Loblolly pine r... 102 4e-040
gb|DR050231.1|DR050231 RTBOR1_22_D04.b1_A029 Roots plus add... 165 5e-040
gb|CO362167.1|CO362167 RTK1_1_F05.g1_A029 Roots minus potas... 122 8e-040
gb|DR092307.1|DR092307 RTAL1_28_G05.b1_A029 Roots plus adde... 102 1e-039
gb|DR090373.1|DR090373 RTAL1_14_D02.g1_A029 Roots plus adde... 116 2e-039
gb|DT633920.1|DT633920 EST1148851 Normalized pine embryo li... 81 4e-039
gb|DR120128.1|DR120128 RTMG1_27_E05.g2_A029 Roots minus mag... 99 5e-039
gb|CF400511.1|CF400511 RTWW1_6_B06.b1_A015 Well-watered lob... 160 2e-038
gb|CV035793.1|CV035793 RTNACL1_42_B01.g1_A029 Roots plus ad... 160 2e-038
gb|DR015200.1|DR015200 STRS1_2_C05.b1_A034 Shoot tip pitch ... 159 3e-038
gb|DR098461.1|DR098461 STRR1_45_E01.g1_A033 Stem Response R... 159 3e-038
gb|DR100138.1|DR100138 STRR1_62_B05.b1_A033 Stem Response R... 159 3e-038
gb|DR102735.1|DR102735 STRR1_83_A06.g1_A033 Stem Response R... 159 3e-038
gb|CF668454.1|CF668454 RTCNT1_36_C09.g1_A029 Root control P... 159 3e-038
gb|CX646780.1|CX646780 COLD1_11_B06.g1_A029 Root cold Pinus... 159 3e-038
gb|DR023285.1|DR023285 STRS1_56_D02.g1_A034 Shoot tip pitch... 159 3e-038
gb|DR111040.1|DR111040 RTS1_14_G09.g1_A029 Roots minus sulf... 159 3e-038
gb|DR055601.1|DR055601 RTCA1_24_E10.g2_A029 Roots minus cal... 108 3e-038
gb|BF186094.1|BF186094 NXCI_132_F04_F NXCI (Nsf Xylem Compr... 159 4e-038
gb|CF474408.1|CF474408 RTWW2_20_A09.g1_A021 Well-watered lo... 159 4e-038
gb|CX713463.1|CX713463 RTPQ1_9_C04.g1_A032 Roots treated wi... 159 4e-038
gb|DR010784.1|DR010784 HEAT1_1_F12.b1_A029 Root at 37 C for... 159 4e-038
gb|DR011201.1|DR011201 HEAT1_4_E06.b1_A029 Root at 37 C for... 159 4e-038
gb|DR100574.1|DR100574 STRR1_65_E02.b1_A033 Stem Response R... 159 4e-038
gb|DR113034.1|DR113034 RTS1_32_B12.g1_A029 Roots minus sulf... 159 4e-038
gb|DR119250.1|DR119250 RTMG1_22_C11.b1_A029 Roots minus mag... 159 4e-038
gb|DR119331.1|DR119331 RTMG1_22_C11.g1_A029 Roots minus mag... 159 4e-038
gb|DR163422.1|DR163422 RTFE1_42_G07.g1_A029 Roots minus iro... 159 4e-038
gb|BG275593.1|BG275593 NXSI_143_F09_F NXSI (Nsf Xylem Side ... 158 5e-038
gb|CX650634.1|CX650634 COLD1_47_B12.b1_A029 Root cold Pinus... 157 1e-037
gb|DR092975.1|DR092975 STRR1_5_F06.b1_A033 Stem Response Re... 156 2e-037
gb|BF609081.1|BF609081 NXSI_040_B10_F NXSI (Nsf Xylem Side ... 156 3e-037
gb|DR746394.1|DR746394 RTCU1_36_E04.g1_A029 Roots plus adde... 96 4e-037
gb|CO169428.1|CO169428 NDL1_7_B04.b1_A029 Needles control P... 155 5e-037
gb|AW011524.1|AW011524 ST21H02 Pine TriplEx shoot tip libra... 98 6e-037
gb|CF396870.1|CF396870 RTDS2_24_A10.g1_A021 Drought-stresse... 155 7e-037
gb|DR056635.1|DR056635 RTCA1_31_C07.g1_A029 Roots minus cal... 103 1e-036
gb|CO368672.1|CO368672 RTK1_42_C07.b1_A029 Roots minus pota... 154 1e-036
gb|DR055518.1|DR055518 RTCA1_24_E10.b1_A029 Roots minus cal... 154 1e-036
gb|DR090297.1|DR090297 RTAL1_14_D02.b1_A029 Roots plus adde... 152 3e-036
gb|DR112973.1|DR112973 RTS1_32_B12.b1_A029 Roots minus sulf... 152 3e-036
gb|DR090465.1|DR090465 RTAL1_15_E12.b1_A029 Roots plus adde... 152 5e-036
gb|CO171240.1|CO171240 NDL1_20_C09.b1_A029 Needles control ... 151 6e-036
gb|AW290718.1|AW290718 NXNV046B02F Nsf Xylem Normal wood Ve... 151 9e-036
gb|CD027376.1|CD027376 NXNV046B02 Nsf Xylem Normal wood Ver... 151 9e-036
gb|DR024751.1|DR024751 STRS1_67_F03.b1_A034 Shoot tip pitch... 150 1e-035
gb|BF609490.1|BF609490 NXSI_043_C03_F NXSI (Nsf Xylem Side ... 95 2e-035
gb|CF399941.1|CF399941 RTWW1_2_C11.b1_A015 Well-watered lob... 149 2e-035
gb|DR071171.1|DR071171 RTDK1_18_C12.b1_A029 Roots, dark Pin... 149 4e-035
gb|CF663902.1|CF663902 RTCNT1_5_H12.g1_A029 Root control Pi... 93 5e-035
gb|DR015024.1|DR015024 STRS1_1_B12.b1_A034 Shoot tip pitch ... 148 6e-035
gb|CR393417.1|CR393417 CR393417 RN Pinus pinaster cDNA clon... 114 3e-034
gb|CX649869.1|CX649869 COLD1_42_B01.b1_A029 Root cold Pinus... 146 3e-034
gb|DR047687.1|DR047687 RTBOR1_2_F07.g1_A029 Roots plus adde... 144 1e-033
gb|DR021638.1|DR021638 STRS1_46_B05.b1_A034 Shoot tip pitch... 143 2e-033
gb|CX649395.1|CX649395 COLD1_35_B04.b1_A029 Root cold Pinus... 142 5e-033
gb|BQ107011.1|BQ107011 NXLV085_E06_F NXLV (Nsf Xylem Late w... 140 2e-032
gb|DR741991.1|DR741991 RTCU1_1_B09.b1_A029 Roots plus added... 138 5e-032
gb|BM158415.1|BM158415 NXLV_034_B09_F NXLV (Nsf Xylem Late ... 136 3e-031
gb|DR089298.1|DR089298 RTAL1_7_G03.g1_A029 Roots plus added... 86 2e-030
gb|BF778542.1|BF778542 NXSI_085_H09_F NXSI (Nsf Xylem Side ... 133 2e-030
gb|DR092690.1|DR092690 STRR1_3_D06.b1_A033 Stem Response Re... 133 2e-030
gb|CF479851.1|CF479851 RTWW3_12_D07.g1_A022 Well-watered lo... 86 2e-030
gb|DR694543.1|DR694543 EST1084635 Normalized pine embryo li... 82 2e-030
gb|DR687528.1|DR687528 EST1077610 Normalized pine embryo li... 81 3e-030
gb|CO369680.1|CO369680 RTK1_48_F01.g1_A029 Roots minus pota... 132 4e-030
gb|AW698185.1|AW698185 NXNV_074_D07_F Nsf Xylem Normal wood... 131 1e-029
gb|DR022663.1|DR022663 STRS1_52_D06.g1_A034 Shoot tip pitch... 86 1e-029
gb|DR089220.1|DR089220 RTAL1_7_G03.b1_A029 Roots plus added... 130 1e-029
gb|BM427751.1|BM427751 NXRV_002_G05_F NXRV (Nsf Xylem Root ... 79 2e-029
gb|BE049743.1|BE049743 NXNV_143_C08_F Nsf Xylem Normal wood... 129 3e-029
gb|CF400025.1|CF400025 RTWW1_2_C11.g1_A015 Well-watered lob... 80 3e-029
gb|BX253271.1|BX253271 BX253271 Pinus pinaster differenciat... 86 1e-028
gb|CF668373.1|CF668373 RTCNT1_36_C09.b1_A029 Root control P... 126 2e-028
gb|DR070227.1|DR070227 RTDK1_12_C03.b1_A029 Roots, dark Pin... 124 9e-028
gb|DR692513.1|DR692513 EST1082601 Normalized pine embryo li... 86 1e-027
gb|DT635613.1|DT635613 EST1150544 Normalized pine embryo li... 52 1e-027
gb|BX251144.1|BX251144 BX251144 Pinus pinaster differenciat... 86 2e-027
gb|BQ198383.1|BQ198383 NXLV130_C02_F NXLV (Nsf Xylem Late w... 120 3e-027
gb|CV035603.1|CV035603 RTNACL1_41_D10.b1_A029 Roots plus ad... 73 4e-027
gb|DR096352.1|DR096352 STRR1_27_A07.g1_A033 Stem Response R... 86 6e-027
gb|DR100599.1|DR100599 STRR1_65_E02.g1_A033 Stem Response R... 101 8e-027
gb|BX251613.1|BX251613 BX251613 Pinus pinaster differenciat... 86 1e-026
gb|BX682844.1|BX682844 BX682844 Pinus pinaster differenciat... 86 1e-026
gb|CF385917.1|CF385917 RTDR1_7_F11.b1_A015 Loblolly pine ro... 120 2e-026
gb|DR092742.1|DR092742 STRR1_3_D06.g1_A033 Stem Response Re... 120 2e-026
gb|DR070096.1|DR070096 RTDK1_11_F07.b1_A029 Roots, dark Pin... 118 7e-026
gb|DR100480.1|DR100480 STRR1_64_A12.g1_A033 Stem Response R... 86 9e-026
gb|CF479772.1|CF479772 RTWW3_12_D07.b1_A022 Well-watered lo... 116 2e-025
gb|DR022594.1|DR022594 STRS1_52_D06.b1_A034 Shoot tip pitch... 116 2e-025
gb|CO197560.1|CO197560 GEO1_7_H02.b1_A029 Root gravitropism... 115 7e-025
gb|CO369775.1|CO369775 RTK1_54_A10.b1_A029 Roots minus pota... 115 7e-025
gb|DR070069.1|DR070069 RTDK1_11_D01.b1_A029 Roots, dark Pin... 115 7e-025
gb|DR096283.1|DR096283 STRR1_27_A07.b1_A033 Stem Response R... 115 7e-025
gb|DR099094.1|DR099094 STRR1_53_C12.b1_A033 Stem Response R... 115 7e-025
gb|DR689717.1|DR689717 EST1079803 Normalized pine embryo li... 52 1e-024
gb|CO363885.1|CO363885 RTK1_12_H12.b1_A029 Roots minus pota... 69 3e-024
gb|CF477424.1|CF477424 RTWW3_7_B01.g1_A022 Well-watered lob... 77 3e-024
gb|DR053875.1|DR053875 RTCA1_13_G12.g1_A029 Roots minus cal... 77 3e-024
gb|BX250040.1|BX250040 BX250040 Pinus pinaster differenciat... 77 3e-024
gb|BF778581.1|BF778581 NXSI_088_D02_F NXSI (Nsf Xylem Side ... 71 5e-024
gb|CF401946.1|CF401946 RTWW1_16_F09.b1_A015 Well-watered lo... 111 6e-024
gb|DR072100.1|DR072100 RTDK1_24_C09.b1_A029 Roots, dark Pin... 111 6e-024
gb|DR684423.1|DR684423 EST1074500 Normalized pine embryo li... 110 1e-023
gb|CV138360.1|CV138360 EST849569 Sequencing ESTs from loblo... 75 2e-023
gb|AW226065.1|AW226065 ST76H11 Pine TriplEx shoot tip libra... 110 2e-023
gb|DR051762.1|DR051762 RTBOR1_32_E10.b1_A029 Roots plus add... 110 2e-023
gb|DR055059.1|DR055059 RTCA1_21_G09.b1_A029 Roots minus cal... 110 2e-023
gb|DR055444.1|DR055444 RTCA1_23_E11.g2_A029 Roots minus cal... 74 3e-023
gb|AW290292.1|AW290292 NXNV018A05F Nsf Xylem Normal wood Ve... 106 3e-022
gb|CD026951.1|CD026951 NXNV018A05 Nsf Xylem Normal wood Ver... 106 3e-022
gb|DR055360.1|DR055360 RTCA1_23_E11.b1_A029 Roots minus cal... 106 3e-022
gb|DR056610.1|DR056610 RTCA1_31_A02.g1_A029 Roots minus cal... 86 4e-022
gb|AW290421.1|AW290421 NXNV020D02F Nsf Xylem Normal wood Ve... 103 3e-021
gb|CD027081.1|CD027081 NXNV020D02 Nsf Xylem Normal wood Ver... 103 3e-021
gb|BE187464.1|BE187464 NXNV_98_E12_F Nsf Xylem Normal wood ... 101 1e-020
gb|BE187483.1|BE187483 NXNV_98_G09_F Nsf Xylem Normal wood ... 101 1e-020
gb|DR050360.1|DR050360 RTBOR1_23_A06.b1_A029 Roots plus add... 101 1e-020
gb|DR102349.1|DR102349 STRR1_80_B02.g1_A033 Stem Response R... 101 1e-020
>gb|CX648594.1|CX648594 COLD1_29_D11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_29_D11_A029 5', mRNA sequence
Length = 862
Score = 188 bits (406), Expect(3) = 2e-068
Identities = 69/108 (63%), Positives = 87/108 (80%)
Frame = +2 / +2
Query: 422 MPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWG 601
M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWG
Sbjct: 509 MNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWG 688
Query: 602 QVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQFL 745
Q WH+N D RGQ LSFE+++SD KT+TS+NV P DW+FG TY GKQF+
Sbjct: 689 QNWHVNADYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 832
Score = 101 bits (215), Expect(2) = 9e-028
Identities = 43/110 (39%), Positives = 72/110 (65%)
Frame = -2 / -1
Query: 751 LQKKLLPRVCLAELPILGHDVETGQRLAIA*AELKR*RLSPHVTVDVPHLAPVAAHREPS 572
+ +L P V +AELP+ G +V LA+ L+R L+P + ++VP L+P++AHR+PS
Sbjct: 838 ISNELFPLVGMAELPVRGSNVVRSNSLAVTGGNLERQGLAPVIGINVPVLSPISAHRQPS 659
Query: 571 *LRSFDLHRPNITRATNVAD*DCEEEVPTVDGEPHTTFAEALNTAVLDGH 422
LR+ DLH N + ++++ +C+E+V +V GEPH+ + N++VLD H
Sbjct: 658 RLRTLDLHTANGSVSSDITYQNCQEKVLSVYGEPHSPYLRTSNSSVLDIH 509
Score = 81.7 bits (172), Expect(3) = 2e-068
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y +D + GACGFGDL + GYG+ T LS+ L+ G ACG C+E++CVED +C+P
Sbjct: 182 YSESDALGTMAGACGFGDLYRQGYGVNTAALSSVLYNGGQACGACFELRCVEDPLYCHP 358
Score = 46.0 bits (94), Expect(2) = 9e-028
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -3 / -2
Query: 402 GLQCLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIP*PCFPRSPN 271
G Q SSTHL+S Q PHA P +LS V P*PC +SPN
Sbjct: 357 GWQ*RGSSTHLSSKQAPHA*PPL*RTLLSAAVLTP*PCLYKSPN 226
Score = 28.6 bits (56), Expect(3) = 2e-068
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 395 CNPPNHHFLMPI 430
CNPP HF++P+
Sbjct: 434 CNPPRQHFVLPV 469
>gb|DR742067.1|DR742067 RTCU1_1_B09.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_1_B09_A029 5', mRNA sequence
Length = 835
Score = 188 bits (406), Expect(3) = 2e-068
Identities = 69/108 (63%), Positives = 87/108 (80%)
Frame = +2 / +3
Query: 422 MPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWG 601
M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWG
Sbjct: 390 MNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWG 569
Query: 602 QVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQFL 745
Q WH+N D RGQ LSFE+++SD KT+TS+NV P DW+FG TY GKQF+
Sbjct: 570 QNWHVNADYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 713
Score = 102 bits (218), Expect = 4e-021
Identities = 44/110 (40%), Positives = 71/110 (64%)
Frame = -2 / -3
Query: 751 LQKKLLPRVCLAELPILGHDVETGQRLAIA*AELKR*RLSPHVTVDVPHLAPVAAHREPS 572
+ +L P V +AELP+ G +V LA+ L+R L P + ++VP L+P++AHR+PS
Sbjct: 719 ISNELFPLVGMAELPVRGSNVVRSNSLAVTGGNLERQGLPPVIGINVPVLSPISAHRQPS 540
Query: 571 *LRSFDLHRPNITRATNVAD*DCEEEVPTVDGEPHTTFAEALNTAVLDGH 422
LR+ DLH N + ++N+ +C+E+V +V GEPH+ + N++VLD H
Sbjct: 539 RLRTLDLHTANGSVSSNITYQNCQEKVLSVYGEPHSPYLRTSNSSVLDIH 390
Score = 99.6 bits (211), Expect(3) = 1e-028
Identities = 43/76 (56%), Positives = 47/76 (61%)
Frame = -3 / -1
Query: 648 NDRGCPLMSQLMCHTWPQLRPIGSHPSSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENL 469
NDR CPL S L C PQ PI SHP PL FT LT+P+P TLLIRTV+KK P NL
Sbjct: 616 NDRACPL*SALTCQFCPQFLPIDSHPVFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANL 437
Query: 468 TPPSRRHLTRRYWMGM 421
PP+ H T YW M
Sbjct: 436 IPPTFAHRTLLYWTFM 389
Score = 81.7 bits (172), Expect(3) = 2e-068
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = +2 / +3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y +D + GACGFGDL + GYG+ T LS+ L+ G ACG C+E++CVED +C+P
Sbjct: 63 YSESDALGTMAGACGFGDLYRQGYGVNTAALSSVLYNGGQACGACFELRCVEDPLYCHP 239
Score = 46.0 bits (94), Expect(3) = 1e-028
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -3 / -1
Query: 402 GLQCLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIP*PCFPRSPN 271
G Q SSTHL+S Q PHA P +LS V P*PC +SPN
Sbjct: 238 GWQ*RGSSTHLSSKQAPHA*PPL*RTLLSAAVLTP*PCLYKSPN 107
Score = 28.6 bits (56), Expect(3) = 2e-068
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 395 CNPPNHHFLMPI 430
CNPP HF++P+
Sbjct: 315 CNPPRQHFVLPV 350
Score = 24.4 bits (47), Expect(3) = 1e-028
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3 / -1
Query: 750 YRRNCFPVYVLPNSQ 706
++ NCFP+ V PN Q
Sbjct: 718 FQTNCFPL*VWPNCQ 674
>gb|CF666895.1|CF666895 RTCNT1_26_G11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_26_G11_A029 5', mRNA sequence
Length = 779
Score = 162 bits (348), Expect(3) = 2e-059
Identities = 55/102 (53%), Positives = 82/102 (80%)
Frame = +2 / +1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PIQY+RV C++EGG+RF++NG ++F+ +L++NVGG G V VK+KG+ GWLP+ RNW
Sbjct: 472 IVPIQYKRVACVKEGGMRFTINGNYYFYLILVTNVGGDGVVADVKVKGSNTGWLPLTRNW 651
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKT 724
GQ W N ++GQ LSF+++SS +T+TS+NV P DW+FG+T
Sbjct: 652 GQNWQSNSILKGQALSFQVTSSGGRTVTSYNVAPSDWQFGQT 777
Score = 83.5 bits (176), Expect(3) = 2e-059
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = +2 / +1
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y AD + GACG+G+L GYG T LSTALF GA+CG C+E+KCV+D + C P
Sbjct: 145 YGGADAAGTMAGACGYGNLYSQGYGTNTAALSTALFNSGASCGACFEIKCVDDPQWCLP 321
Score = 23.1 bits (44), Expect(3) = 2e-059
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +1
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 400 CNPPREHFDM 429
>gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_11_D01_A029 5', mRNA sequence
Length = 748
Score = 159 bits (342), Expect(2) = 3e-057
Identities = 56/108 (51%), Positives = 84/108 (77%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+ +RRV C+++GGVRF++NG +F VLI+NV GAGD+ V +KG++ GW+P+ RNW
Sbjct: 338 IVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNW 517
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W + + GQ LSF ++ SD +T TS+N+VP +WEFG+T++GKQF
Sbjct: 518 GQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQF 661
Score = 86.3 bits (182), Expect(2) = 3e-057
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNPP 406
Y +D +GGACG+G+L GYG+ + LSTALF G +CG C+E+KCV D + C+P
Sbjct: 11 YGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPG 190
Query: 407 NHHFLM 424
N L+
Sbjct: 191 NPSILV 208
>gb|DR163235.1|DR163235 RTFE1_41_E12.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_41_E12_A029 5', mRNA sequence
Length = 876
Score = 188 bits (406), Expect(3) = 3e-057
Identities = 69/108 (63%), Positives = 87/108 (80%)
Frame = +2 / +2
Query: 422 MPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWG 601
M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWG
Sbjct: 230 MNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWG 409
Query: 602 QVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQFL 745
Q WH+N D RGQ LSFE+++SD KT+TS+NV P DW+FG TY GKQF+
Sbjct: 410 QNWHVNADYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 553
Score = 102 bits (218), Expect = 4e-021
Identities = 44/110 (40%), Positives = 71/110 (64%)
Frame = -2 / -3
Query: 751 LQKKLLPRVCLAELPILGHDVETGQRLAIA*AELKR*RLSPHVTVDVPHLAPVAAHREPS 572
+ +L P V +AELP+ G +V LA+ L+R L P + ++VP L+P++AHR+PS
Sbjct: 559 ISNELFPLVGMAELPVRGSNVVRSNSLAVTGGNLERQGLPPVIGINVPVLSPISAHRQPS 380
Query: 571 *LRSFDLHRPNITRATNVAD*DCEEEVPTVDGEPHTTFAEALNTAVLDGH 422
LR+ DLH N + ++N+ +C+E+V +V GEPH+ + N++VLD H
Sbjct: 379 RLRTLDLHTANGSVSSNITYQNCQEKVLSVYGEPHSPYLRTSNSSVLDIH 230
Score = 99.6 bits (211), Expect(3) = 4e-023
Identities = 43/76 (56%), Positives = 47/76 (61%)
Frame = -3 / -1
Query: 648 NDRGCPLMSQLMCHTWPQLRPIGSHPSSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENL 469
NDR CPL S L C PQ PI SHP PL FT LT+P+P TLLIRTV+KK P NL
Sbjct: 456 NDRACPL*SALTCQFCPQFLPIDSHPVFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANL 277
Query: 468 TPPSRRHLTRRYWMGM 421
PP+ H T YW M
Sbjct: 276 IPPTFAHRTLLYWTFM 229
Score = 44.1 bits (90), Expect(3) = 3e-057
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2 / +2
Query: 326 ALFERGAACGGCYEVKCVEDLKHCNP 403
A F G ACG C+E++CVED +C+P
Sbjct: 2 AFFHGGQACGACFELRCVEDPLYCHP 79
Score = 28.6 bits (56), Expect(3) = 3e-057
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 395 CNPPNHHFLMPI 430
CNPP HF++P+
Sbjct: 155 CNPPRQHFVLPV 190
Score = 27.2 bits (53), Expect(3) = 4e-023
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 402 GLQCLRSSTHLTS*QPPHAAP 340
G Q SSTHL+S Q PHA P
Sbjct: 78 GWQ*RGSSTHLSSKQAPHA*P 16
Score = 24.4 bits (47), Expect(3) = 4e-023
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3 / -1
Query: 750 YRRNCFPVYVLPNSQ 706
++ NCFP+ V PN Q
Sbjct: 558 FQTNCFPL*VWPNCQ 514
>gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_C05_A034 5', mRNA sequence
Length = 848
Score = 159 bits (342), Expect(2) = 4e-057
Identities = 56/108 (51%), Positives = 84/108 (77%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+ +RRV C+++GGVRF++NG +F VLI+NV GAGD+ V +KG++ GW+P+ RNW
Sbjct: 503 IVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNW 682
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W + + GQ LSF ++ SD +T TS+N+VP +WEFG+T++GKQF
Sbjct: 683 GQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQF 826
Score = 86.3 bits (182), Expect(2) = 4e-057
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNPP 406
Y +D +GGACG+G+L GYG+ + LSTALF G +CG C+E+KCV D + C+P
Sbjct: 176 YGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPG 355
Query: 407 NHHFLM 424
N L+
Sbjct: 356 NPSILV 373
>gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_A08_A015 5', mRNA sequence
Length = 751
Score = 167 bits (359), Expect(3) = 1e-056
Identities = 61/108 (56%), Positives = 83/108 (76%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RRV C+R+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW PM RNW
Sbjct: 393 IVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNW 572
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W N + GQ LSF++S+SD +T+TS+N P +W+FG+T+ G QF
Sbjct: 573 GQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFEGLQF 716
Score = 75.3 bits (158), Expect(3) = 1e-056
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +2 / +3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
Y +D +GGACG+G+L GYG T LSTALF GA CG CY++KC
Sbjct: 66 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 215
Score = 21.7 bits (41), Expect(3) = 1e-056
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +3
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 321 CNPPLQHFDM 350
>gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_35_D04_A029 5', mRNA sequence
Length = 751
Score = 167 bits (359), Expect(3) = 1e-056
Identities = 61/108 (56%), Positives = 83/108 (76%)
Frame = +2 / +1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RRV C+R+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW PM RNW
Sbjct: 346 IVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNW 525
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W N + GQ LSF++S+SD +T+TS+N P +W+FG+T+ G QF
Sbjct: 526 GQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFEGLQF 669
Score = 75.3 bits (158), Expect(3) = 1e-056
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +2 / +1
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
Y +D +GGACG+G+L GYG T LSTALF GA CG CY++KC
Sbjct: 19 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 168
Score = 21.7 bits (41), Expect(3) = 1e-056
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +1
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 274 CNPPLQHFDM 303
>gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAK45 5' end, mRNA sequence
Length = 778
Score = 166 bits (356), Expect(2) = 1e-056
Identities = 59/107 (55%), Positives = 83/107 (77%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+QYRRV C R+GG+RF++NG +F VLI+NVGGAGDV +V +KG + GW PM RNW
Sbjct: 428 IVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNW 607
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQ 739
GQ W N + GQ LSF++++SD KT+TS+NV +W+FG+T+ G+Q
Sbjct: 608 GQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTFAGEQ 748
Score = 78.0 bits (164), Expect(2) = 1e-056
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D C P
Sbjct: 107 YGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAWCLP 283
>gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA338 5' end, mRNA sequence
Length = 817
Score = 166 bits (356), Expect(2) = 1e-056
Identities = 59/107 (55%), Positives = 83/107 (77%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+QYRRV C R+GG+RF++NG +F VLI+NVGGAGDV +V +KG + GW PM RNW
Sbjct: 428 IVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNW 607
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQ 739
GQ W N + GQ LSF++++SD KT+TS+NV +W+FG+T+ G+Q
Sbjct: 608 GQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTFAGEQ 748
Score = 78.0 bits (164), Expect(2) = 1e-056
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D C P
Sbjct: 107 YGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAWCLP 283
>gb|DR099166.1|DR099166 STRR1_53_C12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_53_C12_A033 5', mRNA sequence
Length = 823
Score = 159 bits (342), Expect(2) = 1e-056
Identities = 56/108 (51%), Positives = 84/108 (77%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+ +RRV C+++GGVRF++NG +F VLI+NV GAGD+ V +KG++ GW+P+ RNW
Sbjct: 321 IVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNW 500
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W + + GQ LSF ++ SD +T TS+N+VP +WEFG+T++GKQF
Sbjct: 501 GQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQF 644
Score = 84.5 bits (178), Expect(2) = 1e-056
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +2 / +3
Query: 236 ADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNPPNHH 415
+D +GGACG+G+L GYG+ + LSTALF G +CG C+E+KCV D + C+P N
Sbjct: 3 SDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPGNPS 182
Query: 416 FLM 424
L+
Sbjct: 183 ILV 191
>gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAI31 5' end, mRNA sequence
Length = 844
Score = 165 bits (355), Expect(3) = 1e-056
Identities = 60/108 (55%), Positives = 83/108 (76%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RRV C+R+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNW
Sbjct: 476 IVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNW 655
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W N + GQ LSF++++SD +T+TS+NV P +W+FG+T+ G QF
Sbjct: 656 GQNWQSNSYLNGQSLSFQVTTSDGRTITSYNVAPANWQFGQTFEGLQF 799
Score = 77.1 bits (162), Expect(3) = 1e-056
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
Y +D +GGACG+G+L GYG T LSTALF GA+CG CYE+KC
Sbjct: 149 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGASCGACYEMKC 298
Score = 21.7 bits (41), Expect(3) = 1e-056
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +2
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 404 CNPPLQHFDM 433
>gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_F09_A034 3', mRNA sequence
Length = 848
Score = 167 bits (359), Expect(3) = 1e-056
Identities = 61/108 (56%), Positives = 83/108 (76%)
Frame = +2 / -3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RRV C+R+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW PM RNW
Sbjct: 354 IVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNW 175
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W N + GQ LSF++S+SD +T+TS+N P +W+FG+T+ G QF
Sbjct: 174 GQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFEGLQF 31
Score = 75.3 bits (158), Expect(3) = 1e-056
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +2 / -3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
Y +D +GGACG+G+L GYG T LSTALF GA CG CY++KC
Sbjct: 681 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 532
Score = 21.7 bits (41), Expect(3) = 1e-056
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / -3
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 426 CNPPLQHFDM 397
>gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_G09_A033 5', mRNA sequence
Length = 853
Score = 167 bits (359), Expect(3) = 1e-056
Identities = 61/108 (56%), Positives = 83/108 (76%)
Frame = +2 / +1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RRV C+R+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW PM RNW
Sbjct: 478 IVPIIFRRVPCVRKGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNW 657
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W N + GQ LSF++S+SD +T+TS+N P +W+FG+T+ G QF
Sbjct: 658 GQNWQSNSYLNGQSLSFQVSTSDGRTITSYNAAPANWQFGQTFEGLQF 801
Score = 75.3 bits (158), Expect(3) = 1e-056
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +2 / +1
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
Y +D +GGACG+G+L GYG T LSTALF GA CG CY++KC
Sbjct: 151 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 300
Score = 21.7 bits (41), Expect(3) = 1e-056
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +1
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 406 CNPPLQHFDM 435
>gb|DT636492.1|DT636492 EST1151423 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGS45 3' end, mRNA sequence
Length = 833
Score = 157 bits (337), Expect(2) = 2e-056
Identities = 56/108 (51%), Positives = 83/108 (76%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+ +RRV C+++GGVRF++NG +F VLI+NV GAGD+ V KG++ GW+P+ RNW
Sbjct: 348 IVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSAKGSQTGWIPLSRNW 527
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W + + GQ LSF ++ SD +T TS+N+VP +WEFG+T++GKQF
Sbjct: 528 GQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTFSGKQF 671
Score = 86.3 bits (182), Expect(2) = 2e-056
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +2 / +3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNPP 406
Y +D +GGACG+G+L GYG+ + LSTALF G +CG C+E+KCV D + C+P
Sbjct: 21 YGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPG 200
Query: 407 NHHFLM 424
N L+
Sbjct: 201 NPSILV 218
>gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_31_H02_A029 5', mRNA sequence
Length = 857
Score = 165 bits (355), Expect(3) = 2e-056
Identities = 60/108 (55%), Positives = 82/108 (75%)
Frame = +2 / +1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RR+ C+REGGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNW
Sbjct: 517 IVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNW 696
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W N + GQ LSF++S+SD + +TS+NV P +W+FG+T+ G QF
Sbjct: 697 GQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANWQFGQTFEGVQF 840
Score = 76.7 bits (161), Expect(3) = 2e-056
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = +2 / +1
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
Y +D +GGACG+G+L GYG T LSTALF GA CG CYE+KC
Sbjct: 190 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKC 339
Score = 21.7 bits (41), Expect(3) = 2e-056
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +1
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 445 CNPPLQHFDM 474
>gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_G12_A029 3', mRNA sequence
Length = 865
Score = 165 bits (355), Expect(3) = 2e-056
Identities = 60/108 (55%), Positives = 82/108 (75%)
Frame = +2 / -1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RR+ C+REGGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNW
Sbjct: 343 IVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNW 164
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W N + GQ LSF++S+SD + +TS+NV P +W+FG+T+ G QF
Sbjct: 163 GQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANWQFGQTFEGVQF 20
Score = 76.7 bits (161), Expect(3) = 2e-056
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = +2 / -1
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
Y +D +GGACG+G+L GYG T LSTALF GA CG CYE+KC
Sbjct: 670 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKC 521
Score = 21.7 bits (41), Expect(3) = 2e-056
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / -1
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 415 CNPPLQHFDM 386
>gb|CF386766.1|CF386766 RTDR1_16_C08.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_16_C08_A015 5', mRNA
sequence
Length = 774
Score = 156 bits (335), Expect(3) = 2e-056
Identities = 53/100 (53%), Positives = 77/100 (77%)
Frame = +2 / +1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+QYRRV+C + GG+RF+++G +F+ +LI+NVGG GDV V +KG+ WLP+ RNW
Sbjct: 475 IVPVQYRRVRCAKGGGIRFTIHGNRYFYLILITNVGGDGDVAEVMVKGSNTDWLPLTRNW 654
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFG 718
GQ W N +++GQ LSF++SSS T+TS+NV P DW+FG
Sbjct: 655 GQNWQSNTNLQGQALSFQVSSSSGHTITSYNVAPSDWQFG 774
Score = 79.4 bits (167), Expect(3) = 2e-056
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +2 / +1
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y D + GACG+G+L GYG T LS LF+ GAACG C+E+KCV+D + C P
Sbjct: 148 YGGGDAAGIMAGACGYGNLYSQGYGTNTAALSAILFDSGAACGACFEIKCVDDSQWCLP 324
Score = 23.1 bits (44), Expect(3) = 2e-056
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +1
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 403 CNPPREHFDM 432
>gb|CF400637.1|CF400637 RTWW1_6_B06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_6_B06_A015 5', mRNA sequence
Length = 761
Score = 156 bits (335), Expect(3) = 2e-056
Identities = 53/100 (53%), Positives = 77/100 (77%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+QYRRV+C + GG+RF+++G +F+ +LI+NVGG GDV V +KG+ WLP+ RNW
Sbjct: 462 IVPVQYRRVRCAKGGGIRFTIHGNRYFYLILITNVGGDGDVAEVMVKGSNTDWLPLTRNW 641
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFG 718
GQ W N +++GQ LSF++SSS T+TS+NV P DW+FG
Sbjct: 642 GQNWQSNTNLQGQALSFQVSSSSGHTITSYNVAPSDWQFG 761
Score = 79.4 bits (167), Expect(3) = 2e-056
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +2 / +3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y D + GACG+G+L GYG T LS LF+ GAACG C+E+KCV+D + C P
Sbjct: 135 YGGGDAAGIMAGACGYGNLYSQGYGTNTAALSAILFDSGAACGACFEIKCVDDSQWCLP 311
Score = 23.1 bits (44), Expect(3) = 2e-056
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +3
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 390 CNPPREHFDM 419
>gb|DR093057.1|DR093057 STRR1_5_F06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_F06_A033 5', mRNA sequence
Length = 884
Score = 156 bits (336), Expect(2) = 2e-056
Identities = 55/108 (50%), Positives = 83/108 (76%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+ +RRV C+++GGVRF++NG +F VLI+NV GAGD+ V +KG++ GW+P+ RNW
Sbjct: 486 IVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNW 665
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W + + GQ LSF ++ SD +T S+N+VP +WEFG+T++GKQF
Sbjct: 666 GQNWQCSTVLVGQSLSFRITGSDRRTSISWNIVPPNWEFGQTFSGKQF 809
Score = 86.3 bits (182), Expect(2) = 2e-056
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +2 / +3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNPP 406
Y +D +GGACG+G+L GYG+ + LSTALF G +CG C+E+KCV D + C+P
Sbjct: 159 YGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPG 338
Query: 407 NHHFLM 424
N L+
Sbjct: 339 NPSILV 356
>gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADO50 3' end, mRNA sequence
Length = 902
Score = 163 bits (351), Expect(2) = 3e-056
Identities = 58/107 (54%), Positives = 82/107 (76%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+QYRRV C R+GG+RF++NG +F VLI+NVGGAGDV +V +KG + GW PM RNW
Sbjct: 485 IVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNW 664
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQ 739
GQ W N + GQ LSF++++SD KT+TS+NV +W+FG+T+ G +
Sbjct: 665 GQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTFAGNR 805
Score = 79.0 bits (166), Expect(2) = 3e-056
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D + C P
Sbjct: 164 YGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPQWCLP 340
>gb|DR163745.1|DR163745 RTFE1_44_D12.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_44_D12_A029 5', mRNA sequence
Length = 836
Score = 188 bits (406), Expect(3) = 4e-056
Identities = 69/108 (63%), Positives = 87/108 (80%)
Frame = +2 / +2
Query: 422 MPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWG 601
M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWG
Sbjct: 218 MNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWG 397
Query: 602 QVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQFL 745
Q WH+N D RGQ LSFE+++SD KT+TS+NV P DW+FG TY GKQF+
Sbjct: 398 QNWHVNADYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 541
Score = 102 bits (218), Expect = 4e-021
Identities = 44/110 (40%), Positives = 71/110 (64%)
Frame = -2 / -2
Query: 751 LQKKLLPRVCLAELPILGHDVETGQRLAIA*AELKR*RLSPHVTVDVPHLAPVAAHREPS 572
+ +L P V +AELP+ G +V LA+ L+R L P + ++VP L+P++AHR+PS
Sbjct: 547 ISNELFPLVGMAELPVRGSNVVRSNSLAVTGGNLERQGLPPVIGINVPVLSPISAHRQPS 368
Query: 571 *LRSFDLHRPNITRATNVAD*DCEEEVPTVDGEPHTTFAEALNTAVLDGH 422
LR+ DLH N + ++N+ +C+E+V +V GEPH+ + N++VLD H
Sbjct: 367 RLRTLDLHTANGSVSSNITYQNCQEKVLSVYGEPHSPYLRTSNSSVLDIH 218
Score = 99.6 bits (211), Expect(3) = 4e-023
Identities = 43/76 (56%), Positives = 47/76 (61%)
Frame = -3 / -3
Query: 648 NDRGCPLMSQLMCHTWPQLRPIGSHPSSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENL 469
NDR CPL S L C PQ PI SHP PL FT LT+P+P TLLIRTV+KK P NL
Sbjct: 444 NDRACPL*SALTCQFCPQFLPIDSHPVFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANL 265
Query: 468 TPPSRRHLTRRYWMGM 421
PP+ H T YW M
Sbjct: 264 IPPTFAHRTLLYWTFM 217
Score = 40.5 bits (82), Expect(3) = 4e-056
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2 / +2
Query: 341 GAACGGCYEVKCVEDLKHCNP 403
G ACG C+E++CVED +C+P
Sbjct: 5 GQACGACFELRCVEDPLYCHP 67
Score = 28.6 bits (56), Expect(3) = 4e-056
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 395 CNPPNHHFLMPI 430
CNPP HF++P+
Sbjct: 143 CNPPRQHFVLPV 178
Score = 27.2 bits (53), Expect(3) = 4e-023
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -3
Query: 402 GLQCLRSSTHLTS*QPPHAAP 340
G Q SSTHL+S Q PHA P
Sbjct: 66 GWQ*RGSSTHLSSKQAPHA*P 4
Score = 24.4 bits (47), Expect(3) = 4e-023
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3 / -3
Query: 750 YRRNCFPVYVLPNSQ 706
++ NCFP+ V PN Q
Sbjct: 546 FQTNCFPL*VWPNCQ 502
>gb|CO172418.1|CO172418 NDL1_29_D02.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_29_D02_A029 5', mRNA sequence
Length = 728
Score = 188 bits (406), Expect(3) = 4e-056
Identities = 69/108 (63%), Positives = 87/108 (80%)
Frame = +2 / -3
Query: 422 MPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWG 601
M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWG
Sbjct: 507 MNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWG 328
Query: 602 QVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQFL 745
Q WH+N D RGQ LSFE+++SD KT+TS+NV P DW+FG TY GKQF+
Sbjct: 327 QNWHVNADYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 184
Score = 102 bits (218), Expect = 4e-021
Identities = 44/110 (40%), Positives = 71/110 (64%)
Frame = -2 / +1
Query: 751 LQKKLLPRVCLAELPILGHDVETGQRLAIA*AELKR*RLSPHVTVDVPHLAPVAAHREPS 572
+ +L P V +AELP+ G +V LA+ L+R L P + ++VP L+P++AHR+PS
Sbjct: 178 ISNELFPLVGMAELPVRGSNVVRSNSLAVTGGNLERQGLPPVIGINVPVLSPISAHRQPS 357
Query: 571 *LRSFDLHRPNITRATNVAD*DCEEEVPTVDGEPHTTFAEALNTAVLDGH 422
LR+ DLH N + ++N+ +C+E+V +V GEPH+ + N++VLD H
Sbjct: 358 RLRTLDLHTANGSVSSNITYQNCQEKVLSVYGEPHSPYLRTSNSSVLDIH 507
Score = 99.6 bits (211), Expect(3) = 3e-023
Identities = 43/76 (56%), Positives = 47/76 (61%)
Frame = -3 / +2
Query: 648 NDRGCPLMSQLMCHTWPQLRPIGSHPSSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENL 469
NDR CPL S L C PQ PI SHP PL FT LT+P+P TLLIRTV+KK P NL
Sbjct: 281 NDRACPL*SALTCQFCPQFLPIDSHPVFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANL 460
Query: 468 TPPSRRHLTRRYWMGM 421
PP+ H T YW M
Sbjct: 461 IPPTFAHRTLLYWTFM 508
Score = 40.5 bits (82), Expect(3) = 4e-056
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2 / -3
Query: 341 GAACGGCYEVKCVEDLKHCNP 403
G ACG C+E++CVED +C+P
Sbjct: 720 GQACGACFELRCVEDPLYCHP 658
Score = 28.6 bits (56), Expect(3) = 4e-056
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 395 CNPPNHHFLMPI 430
CNPP HF++P+
Sbjct: 582 CNPPRQHFVLPV 547
Score = 27.2 bits (53), Expect(3) = 3e-023
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / +2
Query: 402 GLQCLRSSTHLTS*QPPHAAP 340
G Q SSTHL+S Q PHA P
Sbjct: 659 GWQ*RGSSTHLSSKQAPHA*P 721
Score = 24.4 bits (47), Expect(3) = 3e-023
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3 / +2
Query: 750 YRRNCFPVYVLPNSQ 706
++ NCFP+ V PN Q
Sbjct: 179 FQTNCFPL*VWPNCQ 223
>gb|CF402042.1|CF402042 RTWW1_16_F09.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_16_F09_A015 5', mRNA sequence
Length = 753
Score = 153 bits (328), Expect(3) = 5e-056
Identities = 51/99 (51%), Positives = 76/99 (76%)
Frame = +2 / +1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+QYRRV C++EGG+RF++NG ++F+ +L++NVGG G V VK+KG+ GWLP+ RNW
Sbjct: 457 IVPVQYRRVACVKEGGIRFTINGNYYFYLILVTNVGGDGVVADVKVKGSNTGWLPLSRNW 636
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEF 715
GQ W N ++GQ LSF ++SS + +TS+NV P W+F
Sbjct: 637 GQNWQCNTILKGQALSFRVTSSGGRPVTSYNVAPSHWQF 753
Score = 81.3 bits (171), Expect(3) = 5e-056
Identities = 30/59 (50%), Positives = 38/59 (64%)
Frame = +2 / +1
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y AD + GACG+G+L GYG T LST LF GA+CG C+E+KCV+D + C P
Sbjct: 130 YGGADASGTMQGACGYGNLYSQGYGTNTAALSTVLFNSGASCGSCFEIKCVDDPQWCLP 306
Score = 23.1 bits (44), Expect(3) = 5e-056
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +1
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 385 CNPPREHFDM 414
>gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds
Length = 919
Score = 161 bits (346), Expect(3) = 8e-056
Identities = 60/107 (56%), Positives = 80/107 (74%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI Y RV CLR+GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNW
Sbjct: 374 IVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRSGWQPMSRNW 553
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQ 739
GQ W N + GQ LSF++++SD +T+ S NV P +W+FG+T+ G Q
Sbjct: 554 GQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
Score = 79.0 bits (166), Expect(3) = 8e-056
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y +D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D + C P
Sbjct: 53 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMRCNDDPQWCLP 229
Score = 21.7 bits (41), Expect(3) = 8e-056
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +2
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 302 CNPPLQHFDM 331
>gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_C05_A022 5', mRNA
sequence
Length = 765
Score = 163 bits (350), Expect(2) = 8e-056
Identities = 58/105 (55%), Positives = 81/105 (77%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+QYRRV C R+GG+RF++NG +F VLI+NVGGAGDV +V +KG + GW PM RNW
Sbjct: 449 IVPVQYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNW 628
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTG 733
GQ W N + GQ LSF++++SD KT+TS+NV +W+FG+T+ G
Sbjct: 629 GQNWQSNSYLDGQSLSFKVTTSDGKTVTSYNVASSNWQFGQTFAG 763
Score = 78.0 bits (164), Expect(2) = 8e-056
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D C P
Sbjct: 128 YGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAWCLP 304
>gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds
Length = 998
Score = 161 bits (346), Expect(3) = 9e-056
Identities = 60/107 (56%), Positives = 80/107 (74%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI Y RV CLR+GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNW
Sbjct: 525 IVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRSGWQPMSRNW 704
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQ 739
GQ W N + GQ LSF++++SD +T+ S NV P +W+FG+T+ G Q
Sbjct: 705 GQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 845
Score = 79.0 bits (166), Expect(3) = 9e-056
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = +2 / +3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y +D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D + C P
Sbjct: 204 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMRCNDDPQWCLP 380
Score = 21.7 bits (41), Expect(3) = 9e-056
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +3
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 453 CNPPLQHFDM 482
>gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds
Length = 891
Score = 161 bits (346), Expect(3) = 1e-055
Identities = 60/107 (56%), Positives = 80/107 (74%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI Y RV CLR+GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNW
Sbjct: 374 IVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNVGGAGDVNAVSIKGSRSGWQPMSRNW 553
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQ 739
GQ W N + GQ LSF++++SD +T+ S NV P +W+FG+T+ G Q
Sbjct: 554 GQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
Score = 78.5 bits (165), Expect(3) = 1e-055
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y +D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D + C P
Sbjct: 53 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMQCNDDPQWCLP 229
Score = 21.7 bits (41), Expect(3) = 1e-055
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +2
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 302 CNPPLQHFDM 331
>gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 160 bits (345), Expect(3) = 1e-055
Identities = 60/107 (56%), Positives = 80/107 (74%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI Y RV CLR+GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNW
Sbjct: 374 IVPILYTRVPCLRKGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSMSGWQPMSRNW 553
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQ 739
GQ W N + GQ LSF++++SD +T+ S NV P +W+FG+T+ G Q
Sbjct: 554 GQNWQSNSYLNGQSLSFQVTTSDGRTIVSNNVAPSNWQFGQTFEGSQ 694
Score = 79.0 bits (166), Expect(3) = 1e-055
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y +D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D + C P
Sbjct: 53 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMRCNDDPQWCLP 229
Score = 21.7 bits (41), Expect(3) = 1e-055
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +2
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 302 CNPPLQHFDM 331
>gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_42_B01_A029 5', mRNA sequence
Length = 862
Score = 162 bits (348), Expect(2) = 3e-055
Identities = 58/107 (54%), Positives = 80/107 (74%)
Frame = +2 / +1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+ Y+RV C R GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNW
Sbjct: 493 IVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNW 672
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQ 739
GQ W N + GQ LSF++++SD +T+TS+N P +W+FG+T+ G Q
Sbjct: 673 GQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPSNWQFGQTFAGAQ 813
Score = 77.1 bits (162), Expect(2) = 3e-055
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +2 / +1
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y D +GGACG+G+L GYG +T LSTALF G +CG C+ ++C +D + C P
Sbjct: 172 YGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQWCLP 348
>gb|CO367410.1|CO367410 RTK1_34_D03.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_34_D03_A029 3', mRNA sequence
Length = 851
Score = 165 bits (355), Expect(3) = 3e-055
Identities = 60/108 (55%), Positives = 82/108 (75%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RR+ C+REGGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNW
Sbjct: 302 IVPIMFRRIPCVREGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNW 481
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W N + GQ LSF++S+SD + +TS+NV P +W+FG+T+ G QF
Sbjct: 482 GQNWQSNSYLNGQTLSFQVSTSDGRIITSYNVAPANWQFGQTFEGVQF 625
Score = 72.5 bits (152), Expect(3) = 3e-055
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +2 / +2
Query: 254 IGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
+GGACG+G+L GYG T LSTALF GA CG CYE+KC
Sbjct: 2 MGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKC 124
Score = 21.7 bits (41), Expect(3) = 3e-055
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +2
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 230 CNPPLQHFDM 259
>gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAD27 5' end, mRNA sequence
Length = 886
Score = 162 bits (349), Expect(3) = 3e-055
Identities = 59/108 (54%), Positives = 82/108 (75%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RRV C+R+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNW
Sbjct: 495 IVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNW 674
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W N + GQ LSF++++SD + +TS+NV P +W+FG+T+ G QF
Sbjct: 675 GQNWQSNSYLNGQTLSFQVTTSDGRIITSYNVAPANWQFGQTFEGLQF 818
Score = 75.3 bits (158), Expect(3) = 3e-055
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +2 / +3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
Y +D +GGACG+G+L GYG T LSTALF G+ CG CYE+KC
Sbjct: 168 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGSTCGACYEMKC 317
Score = 21.7 bits (41), Expect(3) = 3e-055
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +3
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 423 CNPPLQHFDM 452
>gb|CX652556.1|CX652556 COLD1_59_H02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_59_H02_A029 5', mRNA sequence
Length = 699
Score = 159 bits (341), Expect(2) = 6e-055
Identities = 56/108 (51%), Positives = 84/108 (77%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+ +RRV C+++GGVRF++NG +F VLI+NV GAGD+ V +KG++ GW+P+ RNW
Sbjct: 296 IVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNW 475
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W + + GQ LSF ++ SD +T TS+N+VP +WEFG+T++GKQF
Sbjct: 476 GQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTFSGKQF 619
Score = 79.0 bits (166), Expect(2) = 6e-055
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +2 / +2
Query: 260 GACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNPPNHHFLM 424
GACG+G+L GYG+ + LSTALF G +CG C+E+KCV D + C+P N L+
Sbjct: 2 GACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPGNPSILV 166
>gb|CO171305.1|CO171305 NDL1_20_C09.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_20_C09_A029 5', mRNA sequence
Length = 776
Score = 162 bits (348), Expect(4) = 7e-055
Identities = 55/102 (53%), Positives = 82/102 (80%)
Frame = +2 / +1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PIQY+RV C++EGG+RF++NG ++F+ +L++NVGG G V VK+KG+ GWLP+ RNW
Sbjct: 469 IVPIQYKRVACVKEGGMRFTINGNYYFYLILVTNVGGDGVVADVKVKGSNTGWLPLTRNW 648
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKT 724
GQ W N ++GQ LSF+++SS +T+TS+NV P DW+FG+T
Sbjct: 649 GQNWQSNSILKGQALSFQVTSSGGRTVTSYNVAPSDWQFGQT 774
Score = 49.2 bits (101), Expect(4) = 7e-055
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERG 343
Y AD + GACG+G+L GYG T LSTALF G
Sbjct: 143 YGGADAAGTMAGACGYGNLYSQGYGTNTAALSTALFNSG 259
Score = 37.3 bits (75), Expect(4) = 7e-055
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 344 AACGGCYEVKCVEDLKHCNP 403
A+CG C+E+KCV+D + C P
Sbjct: 259 ASCGACFEIKCVDDPQWCLP 318
Score = 23.1 bits (44), Expect(4) = 7e-055
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +1
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 397 CNPPREHFDM 426
>gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 158 bits (339), Expect(3) = 9e-055
Identities = 60/107 (56%), Positives = 78/107 (72%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI Y RV CLR+GG+RF+VNG F VLI+NVGGAGDV +V IKG GW PM RNW
Sbjct: 374 IVPILYTRVPCLRKGGIRFTVNGHSCFNLVLITNVGGAGDVHAVSIKGPRSGWQPMSRNW 553
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQ 739
GQ W N + GQ LSF++++SD +T+ S NV P +W+FG+T+ G Q
Sbjct: 554 GQNWQSNSYLNGQSLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
Score = 78.5 bits (165), Expect(3) = 9e-055
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y +D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D + C P
Sbjct: 53 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMQCNDDPQWCLP 229
Score = 21.7 bits (41), Expect(3) = 9e-055
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +2
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 302 CNPPLQHFDM 331
>gb|DT632413.1|DT632413 EST1147344 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFJ73 3' end, mRNA sequence
Length = 826
Score = 153 bits (328), Expect(3) = 1e-054
Identities = 56/102 (54%), Positives = 77/102 (75%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI YRRV CLR+GG+RF++NG +F VLISNVGGAG V++V IKG+ W PM RNW
Sbjct: 519 IVPILYRRVLCLRKGGIRFTINGLPYFNLVLISNVGGAGGVQAVSIKGSNTSWQPMSRNW 698
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKT 724
GQ W N + GQ LSF++++SD +T+ S+N P +W+FG+T
Sbjct: 699 GQNWQSNSFLNGQSLSFKVTTSDGRTIVSYNAAPSNWQFGQT 824
Score = 83.1 bits (175), Expect(3) = 1e-054
Identities = 30/59 (50%), Positives = 38/59 (64%)
Frame = +2 / +3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y D +GGACG+G+L GYG T LSTALF G +CG CYE+KC++D + C P
Sbjct: 198 YGGIDASGTMGGACGYGNLYSQGYGTDTAALSTALFNNGLSCGACYEMKCIDDPEWCLP 374
Score = 21.7 bits (41), Expect(3) = 1e-054
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +3
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 447 CNPPLRHFDM 476
>gb|CX650703.1|CX650703 COLD1_47_B12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_47_B12_A029 5', mRNA sequence
Length = 629
Score = 157 bits (337), Expect(3) = 3e-054
Identities = 58/107 (54%), Positives = 77/107 (71%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI YRRV C+R+GG+RF+VNG +F VLI+NVGG GDV +V IKG+ GW PM RNW
Sbjct: 303 IVPILYRRVPCVRKGGIRFTVNGHSYFNLVLITNVGGPGDVHAVSIKGSRTGWQPMSRNW 482
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQ 739
GQ W N + Q LSF++++SD KT S+N P W+FG+T+ G Q
Sbjct: 483 GQNWQSNSYLNEQSLSFQVTTSDGKTFVSYNAAPSSWQFGQTFEGCQ 623
Score = 76.7 bits (161), Expect(3) = 3e-054
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +2 / +3
Query: 254 IGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
+GGACG+G+L GYG T LSTALF G +CG CYE++C +D + C P
Sbjct: 9 MGGACGYGNLNSQGYGTNTAALSTALFNDGLSCGACYEMQCNDDAQWCLP 158
Score = 21.7 bits (41), Expect(3) = 3e-054
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +3
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 231 CNPPLQHFDM 260
>gb|CO368748.1|CO368748 RTK1_42_C07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_C07_A029 5', mRNA sequence
Length = 700
Score = 160 bits (344), Expect(3) = 3e-054
Identities = 58/108 (53%), Positives = 82/108 (75%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RRV C+R+GGVRF++NG +F VLI+NVGG GDV +V IKG++ GW M RNW
Sbjct: 342 IVPIMFRRVPCVRKGGVRFAINGHSYFNLVLITNVGGVGDVEAVSIKGSKTGWQAMSRNW 521
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W N + GQ LSF++++SD +T+TS+NV +W+FG+T+ G QF
Sbjct: 522 GQNWQSNSYLNGQTLSFQVTTSDGRTITSYNVASANWQFGQTFEGLQF 665
Score = 73.5 bits (154), Expect(3) = 3e-054
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = +2 / +3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
Y +D +GG CG+G+L GYG T LSTALF GA CG CY++KC
Sbjct: 15 YGGSDASGTMGGVCGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 164
Score = 21.7 bits (41), Expect(3) = 3e-054
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +3
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 270 CNPPLQHFDM 299
>gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_35_B04_A029 5', mRNA sequence
Length = 670
Score = 148 bits (318), Expect(2) = 5e-054
Identities = 52/103 (50%), Positives = 79/103 (76%)
Frame = +2 / +1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+ +RRV C+++GGVRF++NG +F VLI+NV GAGD+ V +KG++ GW+P+ RNW
Sbjct: 361 IVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNW 540
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTY 727
GQ W + + GQ LSF ++ SD +T TS+N+VP +WEFG+T+
Sbjct: 541 GQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTF 669
Score = 86.3 bits (182), Expect(2) = 5e-054
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +2 / +1
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNPP 406
Y +D +GGACG+G+L GYG+ + LSTALF G +CG C+E+KCV D + C+P
Sbjct: 34 YGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPG 213
Query: 407 NHHFLM 424
N L+
Sbjct: 214 NPSILV 231
>gb|DR097316.1|DR097316 STRR1_33_H05.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_33_H05_A033 5', mRNA sequence
Length = 794
Score = 158 bits (340), Expect(2) = 1e-053
Identities = 59/108 (54%), Positives = 79/108 (73%)
Frame = +2 / -1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI YRRV CLR+GG+RF++NG +F VLI+NV GAGDV +V IKG+ GW M RNW
Sbjct: 476 IVPILYRRVPCLRKGGIRFTINGHAYFNLVLITNVAGAGDVHAVSIKGSGSGWQAMSRNW 297
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W N + GQ LSF++++SD KT S++V P W+FG+T+ G QF
Sbjct: 296 GQNWQSNSYLNGQSLSFQVTTSDGKTTVSYSVAPSGWQFGQTFEGSQF 153
Score = 75.3 bits (158), Expect(2) = 1e-053
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +2 / -1
Query: 236 ADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHC 397
+D +GGACG+G+L GYG T LSTALF G +CG CYE+KC D + C
Sbjct: 788 SDASRTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGSCYEMKCNNDPQWC 627
>gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAZ77 3' end, mRNA sequence
Length = 848
Score = 157 bits (337), Expect(3) = 1e-053
Identities = 57/103 (55%), Positives = 80/103 (77%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RRV C+R+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNW
Sbjct: 540 IVPIIFRRVPCVRKGGVRFTINGHPYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNW 719
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTY 727
GQ W N + GQ LSF++++SD +T+TS+NV P +W+FG+T+
Sbjct: 720 GQNWQSNSYLNGQALSFQVTTSDGRTITSYNVAPANWQFGQTF 848
Score = 75.3 bits (158), Expect(3) = 1e-053
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +2 / +3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
Y +D +GGACG+G+L GYG T LSTALF GA CG CY++KC
Sbjct: 213 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 362
Score = 21.7 bits (41), Expect(3) = 1e-053
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +3
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 468 CNPPLQHFDM 497
>gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_1_F12_A029 5', mRNA sequence
Length = 733
Score = 150 bits (323), Expect(3) = 2e-053
Identities = 55/101 (54%), Positives = 76/101 (75%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI YRRV CLR+GG+RF++ G +F VLISNVGGAGDV++V IK ++ GW PM RNW
Sbjct: 431 IVPILYRRVPCLRKGGIRFTIAGHSYFNLVLISNVGGAGDVQAVSIKSSKTGWQPMSRNW 610
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGK 721
GQ W N + GQ LSF++++SD +T S+N P +W+FG+
Sbjct: 611 GQNWQSNSLLNGQSLSFKVTTSDGRTTVSYNTAPSNWQFGQ 733
Score = 80.8 bits (170), Expect(3) = 2e-053
Identities = 30/59 (50%), Positives = 38/59 (64%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y +D +GGACG+G+L GYG T LSTALF G +CG CYE+KC +D + C P
Sbjct: 110 YGGSDASGTMGGACGYGNLYSQGYGTDTAALSTALFNNGFSCGACYEMKCNDDPQWCLP 286
Score = 21.7 bits (41), Expect(3) = 2e-053
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +2
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 359 CNPPLQHFDM 388
>gb|DR019211.1|DR019211 STRS1_28_B06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_B06_A034 5', mRNA sequence
Length = 869
Score = 160 bits (343), Expect(2) = 5e-053
Identities = 59/108 (54%), Positives = 82/108 (75%)
Frame = +2 / +1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI YRRV C ++GG+RF++NG +F VLISNVGGAGDV V IKG+ GW PM RNW
Sbjct: 484 VVPILYRRVPCHKKGGIRFTINGHSYFNLVLISNVGGAGDVHGVWIKGSRTGWQPMSRNW 663
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W N + GQ LSF++++SD +++TS+NV +W+FG+T++G QF
Sbjct: 664 GQNWQSNSYLNGQSLSFKVTTSDGRSVTSYNVASVNWQFGQTFSGAQF 807
Score = 72.1 bits (151), Expect(2) = 5e-053
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +2 / +1
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHC 397
Y +D + GACG+G+L GYG T LSTALF G +CG C++V C +D + C
Sbjct: 187 YGGSDASGTMSGACGYGNLYSQGYGANTAALSTALFNNGLSCGACFQVMCNDDPQWC 357
>gb|CF475910.1|CF475910 RTWW2_15_D07.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_15_D07_A021 5', mRNA sequence
Length = 664
Score = 188 bits (406), Expect(3) = 7e-053
Identities = 69/108 (63%), Positives = 87/108 (80%)
Frame = +2 / +2
Query: 422 MPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWG 601
M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWG
Sbjct: 197 MNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWG 376
Query: 602 QVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQFL 745
Q WH+N D RGQ LSFE+++SD KT+TS+NV P DW+FG TY GKQF+
Sbjct: 377 QNWHVNADYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 520
Score = 102 bits (218), Expect = 4e-021
Identities = 44/110 (40%), Positives = 71/110 (64%)
Frame = -2 / -1
Query: 751 LQKKLLPRVCLAELPILGHDVETGQRLAIA*AELKR*RLSPHVTVDVPHLAPVAAHREPS 572
+ +L P V +AELP+ G +V LA+ L+R L P + ++VP L+P++AHR+PS
Sbjct: 526 ISNELFPLVGMAELPVRGSNVVRSNSLAVTGGNLERQGLPPVIGINVPVLSPISAHRQPS 347
Query: 571 *LRSFDLHRPNITRATNVAD*DCEEEVPTVDGEPHTTFAEALNTAVLDGH 422
LR+ DLH N + ++N+ +C+E+V +V GEPH+ + N++VLD H
Sbjct: 346 RLRTLDLHTANGSVSSNITYQNCQEKVLSVYGEPHSPYLRTSNSSVLDIH 197
Score = 99.6 bits (211), Expect(2) = 1e-021
Identities = 43/76 (56%), Positives = 47/76 (61%)
Frame = -3 / -2
Query: 648 NDRGCPLMSQLMCHTWPQLRPIGSHPSSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENL 469
NDR CPL S L C PQ PI SHP PL FT LT+P+P TLLIRTV+KK P NL
Sbjct: 423 NDRACPL*SALTCQFCPQFLPIDSHPVFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANL 244
Query: 468 TPPSRRHLTRRYWMGM 421
PP+ H T YW M
Sbjct: 243 IPPTFAHRTLLYWTFM 196
Score = 29.5 bits (58), Expect(3) = 7e-053
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 359 CYEVKCVEDLKHCNP 403
C+E++CVED +C+P
Sbjct: 2 CFELRCVEDPLYCHP 46
Score = 28.6 bits (56), Expect(3) = 7e-053
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 395 CNPPNHHFLMPI 430
CNPP HF++P+
Sbjct: 122 CNPPRQHFVLPV 157
Score = 24.4 bits (47), Expect(2) = 1e-021
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3 / -2
Query: 750 YRRNCFPVYVLPNSQ 706
++ NCFP+ V PN Q
Sbjct: 525 FQTNCFPL*VWPNCQ 481
>gb|CF400653.1|CF400653 RTWW1_6_A01.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_6_A01_A015 5', mRNA sequence
Length = 559
Score = 160 bits (343), Expect(3) = 7e-053
Identities = 59/95 (62%), Positives = 75/95 (78%)
Frame = +2 / +3
Query: 422 MPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWG 601
M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWG
Sbjct: 273 MNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWG 452
Query: 602 QVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKD 706
Q WH+N D RGQ LSFE+++SD KT+TS+N P D
Sbjct: 453 QNWHVNADYRGQALSFEVTTSDRKTVTSYNAAPSD 557
Score = 99.6 bits (211), Expect(2) = 3e-025
Identities = 43/76 (56%), Positives = 47/76 (61%)
Frame = -3 / -1
Query: 648 NDRGCPLMSQLMCHTWPQLRPIGSHPSSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENL 469
NDR CPL S L C PQ PI SHP PL FT LT+P+P TLLIRTV+KK P NL
Sbjct: 499 NDRACPL*SALTCQFCPQFLPIDSHPVFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANL 320
Query: 468 TPPSRRHLTRRYWMGM 421
PP+ H T YW M
Sbjct: 319 IPPTFAHRTLLYWTFM 272
Score = 58.3 bits (121), Expect(3) = 7e-053
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2 / +3
Query: 287 KHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
+ GYG+ T LS+ L+ G ACG C+E++CVED +C+P
Sbjct: 6 RQGYGVNTAALSSVLYNGGQACGACFELRCVEDPLYCHP 122
Score = 38.6 bits (78), Expect(2) = 3e-025
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = -3 / -1
Query: 402 GLQCLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIP*PC 289
G Q SSTHL+S Q PHA P +LS V P*PC
Sbjct: 121 GWQ*RGSSTHLSSKQAPHA*PPL*RTLLSAAVLTP*PC 8
Score = 28.6 bits (56), Expect(3) = 7e-053
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 395 CNPPNHHFLMPI 430
CNPP HF++P+
Sbjct: 198 CNPPRQHFVLPV 233
>gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_9_E12_A029 5', mRNA sequence
Length = 812
Score = 154 bits (330), Expect(2) = 8e-053
Identities = 55/101 (54%), Positives = 76/101 (75%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+ Y+RV C R GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNW
Sbjct: 510 IVPVMYQRVPCHRSGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNW 689
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGK 721
GQ W N + GQ LSF++++SD +T+TS+N P +W+FG+
Sbjct: 690 GQNWQSNSYLNGQSLSFKVTTSDGRTVTSYNAAPSNWQFGQ 812
Score = 77.1 bits (162), Expect(2) = 8e-053
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +2 / +3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNP 403
Y D +GGACG+G+L GYG +T LSTALF G +CG C+ ++C +D + C P
Sbjct: 189 YGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQWCLP 365
>gb|DR096273.1|DR096273 STRR1_26_H05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_H05_A033 5', mRNA sequence
Length = 801
Score = 144 bits (309), Expect(2) = 1e-052
Identities = 51/100 (51%), Positives = 76/100 (76%)
Frame = +2 / +3
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+ +RRV C+++GGVRF++NG +F VLI+NV GAGD+ V +KG++ GW+P+ RNW
Sbjct: 501 IVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNW 680
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFG 718
GQ W + + GQ LSF ++ SD +T TS+N+VP +WEFG
Sbjct: 681 GQNWQCSTVLVGQSLSFRITGSDPQTSTSWNIVPPNWEFG 800
Score = 86.3 bits (182), Expect(2) = 1e-052
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +2 / +3
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKHCNPP 406
Y +D +GGACG+G+L GYG+ + LSTALF G +CG C+E+KCV D + C+P
Sbjct: 174 YGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPG 353
Query: 407 NHHFLM 424
N L+
Sbjct: 354 NPSILV 371
>gb|DR098553.1|DR098553 STRR1_46_F12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_46_F12_A033 3', mRNA sequence
Length = 697
Score = 159 bits (341), Expect(3) = 4e-052
Identities = 56/108 (51%), Positives = 84/108 (77%)
Frame = +2 / -1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++P+ +RRV C+++GGVRF++NG +F VLI+NV GAGD+ V +KG++ GW+P+ RNW
Sbjct: 379 IVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNW 200
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTYTGKQF 742
GQ W + + GQ LSF ++ SD +T TS+N+VP +WEFG+T++GKQF
Sbjct: 199 GQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTFSGKQF 56
Score = 48.3 bits (99), Expect(3) = 4e-052
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2 / -2
Query: 236 ADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERG 343
+D +GGACG+G+L GYG+ + LSTALF G
Sbjct: 696 SDASGTMGGACGYGNLYSQGYGVQSAALSTALFTAG 589
Score = 41.4 bits (84), Expect(3) = 4e-052
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2 / -1
Query: 341 GAACGGCYEVKCVEDLKHCNPPNHHFLM 424
G +CG C+E+KCV D + C+P N L+
Sbjct: 592 GLSCGACFEIKCVNDPEWCHPGNPSILV 509
>gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_B04_A029 5', mRNA sequence
Length = 810
Score = 153 bits (328), Expect(3) = 4e-052
Identities = 56/103 (54%), Positives = 77/103 (74%)
Frame = +2 / +1
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RRV C+R+GGVRF++NG +F VLI+NV AGDV +V IKG+ GW M RNW
Sbjct: 502 IVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNVADAGDVEAVSIKGSNTGWQEMSRNW 681
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWEFGKTY 727
GQ W N + GQ LSF ++SSD +T+TS+NV P +W+FG+T+
Sbjct: 682 GQNWQSNSYLNGQSLSFRVTSSDGRTVTSYNVAPANWQFGQTF 810
Score = 74.4 bits (156), Expect(3) = 4e-052
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +2 / +1
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
Y +D +GGACG+G+L GYG T LSTALF G CG CYE+KC
Sbjct: 175 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLTCGACYEMKC 324
Score = 21.7 bits (41), Expect(3) = 4e-052
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +1
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 430 CNPPLQHFDM 459
>gb|CV144435.1|CV144435 EST855644 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPID557 5' end, mRNA sequence
Length = 769
Score = 149 bits (320), Expect(3) = 6e-052
Identities = 54/98 (55%), Positives = 75/98 (76%)
Frame = +2 / +2
Query: 419 LMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 598
++PI +RRV C+R+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNW
Sbjct: 476 IVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNW 655
Query: 599 GQVWHINCDMRGQPLSFELSSSDSKTLTSFNVVPKDWE 712
GQ W N + GQ LSF++++SD +T+TS+NV P +W+
Sbjct: 656 GQNWQSNSYLNGQSLSFQVTTSDGRTITSYNVAPANWQ 769
Score = 77.1 bits (162), Expect(3) = 6e-052
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = +2 / +2
Query: 227 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 376
Y +D +GGACG+G+L GYG T LSTALF GA+CG CYE+KC
Sbjct: 149 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGASCGACYEMKC 298
Score = 21.7 bits (41), Expect(3) = 6e-052
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +2
Query: 395 CNPPNHHFLM 424
CNPP HF M
Sbjct: 404 CNPPLQHFDM 433
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 491,439,759
Number of Sequences: 355925
Number of extensions: 6686717
Number of successful extensions: 42935
Number of sequences better than 1.0e-020: 256
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 16068516000
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)