TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493499.2.1
(785 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX253864.1|BX253864 BX253864 Pinus pinaster differenciat... 118 2e-039
gb|DR744031.1|DR744031 RTCU1_19_G01.g1_A029 Roots plus adde... 113 2e-037
gb|DR024314.1|DR024314 STRS1_64_C03.b1_A034 Shoot tip pitch... 111 1e-036
gb|DR015214.1|DR015214 STRS1_2_D11.b1_A034 Shoot tip pitch ... 84 1e-036
gb|BX676981.1|BX676981 BX676981 RN Pinus pinaster cDNA clon... 115 2e-035
gb|DR019261.1|DR019261 STRS1_28_F11.g1_A034 Shoot tip pitch... 86 3e-035
gb|CO172600.1|CO172600 NDL1_30_E11.g1_A029 Needles control ... 86 3e-035
gb|DR019177.1|DR019177 STRS1_28_F11.b2_A034 Shoot tip pitch... 86 3e-035
gb|DR021519.1|DR021519 STRS1_45_E08.b1_A034 Shoot tip pitch... 85 8e-035
gb|CF667004.1|CF667004 RTCNT1_27_C11.g1_A029 Root control P... 86 1e-034
gb|CO165223.1|CO165223 FLD1_53_D08.b1_A029 Root flooded Pin... 104 3e-034
gb|CO363521.1|CO363521 RTK1_10_F05.b1_A029 Roots minus pota... 100 7e-034
gb|DR069312.1|DR069312 RTDK1_6_H08.b1_A029 Roots, dark Pinu... 100 1e-033
gb|BX255284.1|BX255284 BX255284 Pinus pinaster differenciat... 121 1e-033
gb|DR024455.1|DR024455 STRS1_65_C08.b1_A034 Shoot tip pitch... 106 3e-033
gb|CO161081.1|CO161081 FLD1_26_C01.g1_A029 Root flooded Pin... 87 1e-032
gb|DR015919.1|DR015919 STRS1_6_B08.g1_A034 Shoot tip pitch ... 87 2e-032
gb|CO364236.1|CO364236 RTK1_14_B09.g1_A029 Roots minus pota... 93 3e-032
gb|CF470929.1|CF470929 RTDS1_15_D01.g1_A015 Drought-stresse... 93 3e-032
gb|CF470501.1|CF470501 RTDS1_17_D08.g1_A015 Drought-stresse... 93 3e-032
gb|BX250474.1|BX250474 BX250474 Pinus pinaster differenciat... 95 3e-032
gb|DR018619.1|DR018619 STRS1_24_A10.g1_A034 Shoot tip pitch... 132 4e-032
gb|DR180536.1|DR180536 RTMNUT1_33_F10.b1_A029 Roots minus m... 95 6e-032
gb|CO176349.1|CO176349 NDL1_61_A07.g1_A029 Needles control ... 95 6e-032
gb|CO159636.1|CO159636 FLD1_14_G06.g1_A029 Root flooded Pin... 95 6e-032
gb|CF474107.1|CF474107 RTWW2_18_C05.g1_A021 Well-watered lo... 85 7e-032
gb|DR117368.1|DR117368 RTMG1_6_C05.g1_A029 Roots minus magn... 94 1e-031
gb|DR060675.1|DR060675 RTNIT1_29_G03.b1_A029 Roots minus ni... 113 2e-031
gb|BX255181.1|BX255181 BX255181 Pinus pinaster differenciat... 123 2e-031
gb|DR015862.1|DR015862 STRS1_6_D07.b1_A034 Shoot tip pitch ... 92 3e-031
gb|DR112917.1|DR112917 RTS1_31_C10.g1_A029 Roots minus sulf... 95 3e-031
gb|CO366516.1|CO366516 RTK1_28_G11.b1_A029 Roots minus pota... 95 5e-031
gb|BQ699997.1|BQ699997 NXRV132_G06_F NXRV (Nsf Xylem Root w... 95 5e-031
gb|CF470473.1|CF470473 RTDS1_17_C10.g1_A015 Drought-stresse... 91 1e-030
dbj|BD224494.1| Materials and methods for the modification ... 121 1e-030
gb|CO159644.1|CO159644 FLD1_14_H03.g1_A029 Root flooded Pin... 98 2e-030
gb|CF397284.1|CF397284 RTDS3_2_C09.g1_A022 Drought-stressed... 95 2e-030
gb|DR018139.1|DR018139 STRS1_20_E09.g1_A034 Shoot tip pitch... 81 3e-030
gb|DR099835.1|DR099835 STRR1_59_B12.b1_A033 Stem Response R... 132 3e-030
gb|CV031446.1|CV031446 RTNACL1_1_D07.g1_A029 Roots plus add... 87 3e-030
gb|CF403057.1|CF403057 RTWW1_24_E04.g1_A015 Well-watered lo... 90 3e-030
gb|DT626044.1|DT626044 EST1157968 Sequencing ESTs from lobl... 85 5e-030
gb|CV134986.1|CV134986 EST846195 Sequencing ESTs from loblo... 85 5e-030
gb|DR117403.1|DR117403 RTMG1_6_F06.g1_A029 Roots minus magn... 89 5e-030
gb|CO364746.1|CO364746 RTK1_21_C04.g1_A029 Roots minus pota... 84 9e-030
gb|DR385195.1|DR385195 RTHG1_7_E09.b1_A029 Roots plus added... 79 1e-029
gb|DR110554.1|DR110554 RTS1_11_C05.g1_A029 Roots minus sulf... 79 2e-029
gb|DR094210.1|DR094210 STRR1_13_D08.b1_A033 Stem Response R... 86 2e-029
gb|DR068609.1|DR068609 RTDK1_1_G05.g1_A029 Roots, dark Pinu... 90 2e-029
gb|DR068520.1|DR068520 RTDK1_1_G05.b1_A029 Roots, dark Pinu... 90 2e-029
gb|DR091543.1|DR091543 RTAL1_22_H02.b1_A029 Roots plus adde... 83 3e-029
gb|CV033205.1|CV033205 RTNACL1_33_B10.b1_A029 Roots plus ad... 86 3e-029
gb|CX649821.1|CX649821 COLD1_41_E05.g1_A029 Root cold Pinus... 78 3e-029
gb|CF387087.1|CF387087 RTDR1_10_C07.g1_A015 Loblolly pine r... 86 3e-029
gb|DR388603.1|DR388603 RTHG1_29_G08.b1_A029 Roots plus adde... 90 4e-029
gb|CF392294.1|CF392294 RTDR3_7_D10.b1_A022 Loblolly pine ro... 110 4e-029
gb|DR015938.1|DR015938 STRS1_6_D07.g1_A034 Shoot tip pitch ... 84 1e-028
gb|CO165060.1|CO165060 FLD1_52_C08.b1_A029 Root flooded Pin... 87 2e-028
gb|CO165133.1|CO165133 FLD1_52_C08.g1_A029 Root flooded Pin... 87 2e-028
gb|DR101174.1|DR101174 STRR1_71_C05.b1_A033 Stem Response R... 87 2e-028
gb|DR093166.1|DR093166 STRR1_6_B04.g1_A033 Stem Response Re... 87 2e-028
gb|CO369423.1|CO369423 RTK1_47_B12.b1_A029 Roots minus pota... 87 2e-028
gb|DR020338.1|DR020338 STRS1_36_F03.b1_A034 Shoot tip pitch... 87 2e-028
gb|CO160872.1|CO160872 FLD1_25_E02.b1_A029 Root flooded Pin... 87 2e-028
gb|CO161871.1|CO161871 FLD1_31_E09.g1_A029 Root flooded Pin... 87 2e-028
gb|DR017118.1|DR017118 STRS1_14_E02.b1_A034 Shoot tip pitch... 87 2e-028
gb|DR101844.1|DR101844 STRR1_76_F02.b1_A033 Stem Response R... 87 2e-028
gb|DR743959.1|DR743959 RTCU1_19_G01.b1_A029 Roots plus adde... 113 2e-028
gb|CO158429.1|CO158429 FLD1_6_G10.g1_A029 Root flooded Pinu... 87 2e-028
gb|DR018577.1|DR018577 STRS1_24_C07.b1_A034 Shoot tip pitch... 86 4e-028
gb|CF390898.1|CF390898 RTDR3_2_B12.g1_A022 Loblolly pine ro... 90 7e-028
gb|DR057552.1|DR057552 RTNIT1_6_A10.g1_A029 Roots minus nit... 81 8e-028
gb|DR023822.1|DR023822 STRS1_60_F11.b1_A034 Shoot tip pitch... 89 1e-027
gb|CO159794.1|CO159794 FLD1_16_A12.b1_A029 Root flooded Pin... 85 1e-027
gb|BE187204.1|BE187204 NXNV_160_E12_F Nsf Xylem Normal wood... 123 1e-027
gb|CO161650.1|CO161650 FLD1_30_F08.b1_A029 Root flooded Pin... 84 1e-027
gb|CF668719.1|CF668719 RTCNT1_38_F04.b1_A029 Root control P... 86 1e-027
gb|CO161007.1|CO161007 FLD1_26_C01.b1_A029 Root flooded Pin... 87 2e-027
gb|CF385981.1|CF385981 RTDR1_7_E07.g1_A015 Loblolly pine ro... 86 3e-027
gb|DR385279.1|DR385279 RTHG1_7_E09.g1_A029 Roots plus added... 71 5e-027
gb|CF397459.1|CF397459 RTDS3_3_C06.g1_A022 Drought-stressed... 93 5e-027
gb|DR744088.1|DR744088 RTCU1_20_D07.b1_A029 Roots plus adde... 95 6e-027
gb|CO160954.1|CO160954 FLD1_25_E02.g1_A029 Root flooded Pin... 82 9e-027
gb|DR385544.1|DR385544 RTHG1_9_G06.b1_A029 Roots plus added... 87 9e-027
gb|CF478552.1|CF478552 RTWW3_20_C12.g1_A022 Well-watered lo... 80 9e-027
gb|DR017196.1|DR017196 STRS1_14_E02.g1_A034 Shoot tip pitch... 82 9e-027
gb|DR019885.1|DR019885 STRS1_33_D06.b1_A034 Shoot tip pitch... 77 1e-026
gb|CX645779.1|CX645779 COLD1_5_F07.b1_A029 Root cold Pinus ... 86 1e-026
gb|CF401719.1|CF401719 RTWW1_14_A04.g1_A015 Well-watered lo... 79 1e-026
gb|DR099649.1|DR099649 STRR1_57_D02.b1_A033 Stem Response R... 87 4e-026
gb|BQ106995.1|BQ106995 NXLV085_C09_F NXLV (Nsf Xylem Late w... 81 4e-026
gb|DR054231.1|DR054231 RTCA1_16_B10.b1_A029 Roots minus cal... 84 8e-026
gb|CF474429.1|CF474429 RTWW2_20_F05.g1_A021 Well-watered lo... 80 8e-026
gb|CF393653.1|CF393653 RTDR3_15_B07.g1_A022 Loblolly pine r... 83 1e-025
gb|CF400127.1|CF400127 RTWW1_3_H10.g1_A015 Well-watered lob... 77 1e-025
gb|CO162822.1|CO162822 FLD1_37_F01.g1_A029 Root flooded Pin... 85 1e-025
gb|CO164784.1|CO164784 FLD1_50_G01.b1_A029 Root flooded Pin... 87 1e-025
gb|DR024108.1|DR024108 STRS1_62_A06.g1_A034 Shoot tip pitch... 84 1e-025
gb|CO159223.1|CO159223 FLD1_12_F05.b1_A029 Root flooded Pin... 87 1e-025
gb|DR072788.1|DR072788 RTDK1_28_D01.g1_A029 Roots, dark Pin... 84 1e-025
gb|CF472330.1|CF472330 RTDS1_9_E09.b1_A015 Drought-stressed... 85 1e-025
gb|DR015813.1|DR015813 STRS1_5_F11.g1_A034 Shoot tip pitch ... 84 2e-025
gb|CO176572.1|CO176572 NDL1_62_G03.g1_A029 Needles control ... 105 2e-025
gb|BE644117.1|BE644117 NXCI_054_F12_F NXCI (Nsf Xylem Compr... 116 3e-025
gb|DR160864.1|DR160864 RTFE1_8_B03.g1_A029 Roots minus iron... 80 3e-025
gb|CF394807.1|CF394807 RTDS2_7_F05.g1_A021 Drought-stressed... 70 3e-025
gb|CX646003.1|CX646003 COLD1_6_D11.g1_A029 Root cold Pinus ... 79 4e-025
gb|CF394916.1|CF394916 RTDS2_8_F04.g1_A021 Drought-stressed... 70 4e-025
gb|BX680435.1|BX680435 BX680435 RS Pinus pinaster cDNA clon... 84 5e-025
gb|DR023554.1|DR023554 STRS1_58_A10.g1_A034 Shoot tip pitch... 76 5e-025
gb|DR078636.1|DR078636 RTFEPL1_6_A05.b1_A029 Roots plus add... 60 5e-025
gb|CO362361.1|CO362361 RTK1_3_C10.b1_A029 Roots minus potas... 73 7e-025
gb|BX248899.1|BX248899 BX248899 Pinus pinaster differenciat... 95 1e-024
gb|BE187215.1|BE187215 NXNV_160_F11_F Nsf Xylem Normal wood... 113 1e-024
gb|CO201469.1|CO201469 RTCNT2_6_A10.b1_A029 Root control 2 ... 79 2e-024
gb|CO159443.1|CO159443 FLD1_13_D05.g1_A029 Root flooded Pin... 83 2e-024
gb|DR101682.1|DR101682 STRR1_75_C03.b1_A033 Stem Response R... 87 3e-024
gb|CV034765.1|CV034765 RTNACL1_11_A09.g1_A029 Roots plus ad... 78 3e-024
gb|DR094529.1|DR094529 STRR1_15_D08.b1_A033 Stem Response R... 81 5e-024
gb|DR094610.1|DR094610 STRR1_15_D08.g1_A033 Stem Response R... 81 5e-024
gb|DR694987.1|DR694987 EST1085080 Normalized pine embryo li... 80 5e-024
gb|CX712559.1|CX712559 RTPQ1_3_F09.b2_A032 Roots treated wi... 79 5e-024
gb|CO159361.1|CO159361 FLD1_13_D05.b1_A029 Root flooded Pin... 82 5e-024
gb|DT638838.1|DT638838 EST1153769 Normalized pine embryo li... 80 5e-024
gb|DR088632.1|DR088632 RTAL1_3_G06.b1_A029 Roots plus added... 80 5e-024
gb|CX649739.1|CX649739 COLD1_41_E05.b1_A029 Root cold Pinus... 71 6e-024
gb|BF220696.1|BF220696 NXCI_151_G07_F NXCI (Nsf Xylem Compr... 66 6e-024
gb|CO413944.1|CO413944 EST844329 Sequencing ESTs from loblo... 79 1e-023
gb|DN447754.1|DN447754 EST943553 Sequencing ESTs from loblo... 79 1e-023
gb|DT624388.1|DT624388 EST1158663 Sequencing ESTs from lobl... 79 1e-023
gb|CO410810.1|CO410810 EST841195 Sequencing ESTs from loblo... 79 1e-023
gb|CO410963.1|CO410963 EST841348 Sequencing ESTs from loblo... 79 1e-023
gb|CO413888.1|CO413888 EST844273 Sequencing ESTs from loblo... 79 1e-023
gb|DT625922.1|DT625922 EST1157846 Sequencing ESTs from lobl... 79 1e-023
gb|DT631207.1|DT631207 EST1146138 Normalized pine embryo li... 73 2e-023
gb|DR385625.1|DR385625 RTHG1_9_G06.g1_A029 Roots plus added... 87 2e-023
gb|DR096724.1|DR096724 STRR1_29_H01.g1_A033 Stem Response R... 71 2e-023
gb|CF470928.1|CF470928 RTDS1_15_E03.g1_A015 Drought-stresse... 80 2e-023
gb|CF471095.1|CF471095 RTDS1_16_G03.g1_A015 Drought-stresse... 66 4e-023
gb|CO176695.1|CO176695 NDL1_63_D04.g1_A029 Needles control ... 83 4e-023
gb|CO171082.1|CO171082 NDL1_18_H08.g1_A029 Needles control ... 75 4e-023
gb|DR079859.1|DR079859 RTFEPL1_18_E08.b1_A029 Roots plus ad... 77 6e-023
gb|DR744020.1|DR744020 RTCU1_19_E11.g1_A029 Roots plus adde... 75 6e-023
gb|CO363000.1|CO363000 RTK1_7_B10.b1_A029 Roots minus potas... 79 6e-023
gb|CF386446.1|CF386446 RTDR1_14_C12.g1_A015 Loblolly pine r... 68 8e-023
gb|DR386533.1|DR386533 RTHG1_15_G09.g1_A029 Roots plus adde... 80 1e-022
gb|CF385056.1|CF385056 RTDR1_1_E08.g1_A015 Loblolly pine ro... 69 3e-022
gb|DR098127.1|DR098127 STRR1_39_F11.b1_A033 Stem Response R... 73 3e-022
gb|CF386347.1|CF386347 RTDR1_13_F04.g1_A015 Loblolly pine r... 69 3e-022
gb|DR068907.1|DR068907 RTDK1_3_C12.g1_A029 Roots, dark Pinu... 82 5e-022
gb|CF670695.1|CF670695 RTCNT1_52_A02.b1_A029 Root control P... 75 5e-022
gb|DR024014.1|DR024014 STRS1_61_E05.g1_A034 Shoot tip pitch... 83 5e-022
gb|DR023906.1|DR023906 STRS1_60_F12.g1_A034 Shoot tip pitch... 75 5e-022
gb|DR111145.1|DR111145 RTS1_15_D11.g1_A029 Roots minus sulf... 85 7e-022
gb|DR049066.1|DR049066 RTBOR1_13_C03.b1_A029 Roots plus add... 86 7e-022
gb|DR051169.1|DR051169 RTBOR1_28_D06.b1_A029 Roots plus add... 86 7e-022
gb|DR018897.1|DR018897 STRS1_26_B10.g1_A034 Shoot tip pitch... 76 1e-021
gb|DR388606.1|DR388606 RTHG1_29_G11.b1_A029 Roots plus adde... 76 1e-021
gb|CF666350.1|CF666350 RTCNT1_22_D10.g1_A029 Root control P... 74 1e-021
gb|DR023481.1|DR023481 STRS1_58_A10.b1_A034 Shoot tip pitch... 81 1e-021
gb|BG039597.1|BG039597 NXSI_100_H07_F NXSI (Nsf Xylem Side ... 68 1e-021
gb|CO369926.1|CO369926 RTK1_55_G02.b1_A029 Roots minus pota... 85 1e-021
gb|CF397219.1|CF397219 RTDS3_2_G04.b2_A022 Drought-stressed... 78 2e-021
gb|CF472572.1|CF472572 RTDS1_10_C02.g1_A015 Drought-stresse... 78 2e-021
gb|BX678334.1|BX678334 BX678334 RN Pinus pinaster cDNA clon... 76 2e-021
gb|CF396075.1|CF396075 RTDS2_13_A03.g1_A021 Drought-stresse... 78 2e-021
gb|DR167350.1|DR167350 RTPHOS1_18_F11.b1_A029 Roots minus p... 78 2e-021
gb|CO165247.1|CO165247 FLD1_53_G10.b1_A029 Root flooded Pin... 76 2e-021
gb|DR168289.1|DR168289 RTPHOS1_24_B04.g1_A029 Roots minus p... 85 2e-021
gb|BE762133.1|BE762133 NXCI_081_H03_F NXCI (Nsf Xylem Compr... 90 2e-021
gb|CF398051.1|CF398051 RTDS3_22_D05.b1_A022 Drought-stresse... 78 3e-021
gb|CO169484.1|CO169484 NDL1_7_H09.b1_A029 Needles control P... 92 3e-021
gb|CF470340.1|CF470340 RTDS1_18_D11.g1_A015 Drought-stresse... 68 3e-021
gb|CF385957.1|CF385957 RTDR1_7_E07.b1_A015 Loblolly pine ro... 84 3e-021
gb|DR181918.1|DR181918 RTMNUT1_41_F12.g1_A029 Roots minus m... 77 4e-021
gb|CF471631.1|CF471631 RTDS1_4_B06.g1_A015 Drought-stressed... 78 4e-021
gb|CO164398.1|CO164398 FLD1_47_F07.g1_A029 Root flooded Pin... 71 5e-021
gb|CF403096.1|CF403096 RTWW1_24_D09.g1_A015 Well-watered lo... 71 5e-021
gb|BX255444.1|BX255444 BX255444 Pinus pinaster differenciat... 95 5e-021
gb|DR388213.1|DR388213 RTHG1_26_G06.g1_A029 Roots plus adde... 85 5e-021
gb|DR018056.1|DR018056 STRS1_20_E09.b1_A034 Shoot tip pitch... 85 5e-021
gb|DR179487.1|DR179487 RTMNUT1_22_H11.b2_A029 Roots minus m... 63 5e-021
gb|DR095142.1|DR095142 STRR1_19_C05.b1_A033 Stem Response R... 66 6e-021
gb|CO362964.1|CO362964 RTK1_6_G06.g1_A029 Roots minus potas... 67 6e-021
gb|CF666932.1|CF666932 RTCNT1_27_C11.b1_A029 Root control P... 83 6e-021
gb|BQ698426.1|BQ698426 NXPV_069_G04_F NXPV (Nsf Xylem Plani... 84 6e-021
gb|CO364178.1|CO364178 RTK1_14_E02.b1_A029 Roots minus pota... 61 8e-021
gb|CO366369.1|CO366369 RTK1_27_A12.g1_A029 Roots minus pota... 71 8e-021
gb|CO364719.1|CO364719 RTK1_21_H11.b1_A029 Roots minus pota... 71 8e-021
gb|CO364809.1|CO364809 RTK1_21_H11.g1_A029 Roots minus pota... 71 9e-021
gb|CO366290.1|CO366290 RTK1_27_A12.b1_A029 Roots minus pota... 71 9e-021
gb|DR101612.1|DR101612 STRR1_74_C05.g1_A033 Stem Response R... 79 9e-021
>gb|BX253864.1|BX253864 BX253864 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP089F10 similar to Flavonol 3 O
glucosyltransferase, mRNA sequence
Length = 687
Score = 118 bits (253), Expect(2) = 2e-039
Identities = 48/96 (50%), Positives = 65/96 (67%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + RG +V WAPQ +VL+HP+VGGF TH GW S +E+IS GVPM+ P FAEQ NA+
Sbjct: 302 EETKDRGVLVGWAPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMMCWPFFAEQETNAK 481
Query: 371 YVTHQWGIGYEVGKPLERTAMAKAARKLMAGELGPQ 264
+V +W IG +V K ++R +A R L+ GE G +
Sbjct: 482 FVCEEW*IGMQVKKMVKREELAILVRNLIKGEEGDE 589
Score = 89.5 bits (189), Expect(2) = 1e-021
Identities = 44/91 (48%), Positives = 54/91 (59%)
Frame = +1 / -1
Query: 271 PSSPAISFLAAFAMAVLSSGFPTSYPMPHWCVTYLAFTICSAKHGCTSMGTPSDMASTMD 450
PSSP I FL + A + L + F T P+ H T LAF CSAK G +GTP+ M S ++
Sbjct: 582 PSSPLIKFLTSIANSSLFTIFFTCIPIHHSSHTNLAFVSCSAKKGQHIIGTPALMLSNVE 403
Query: 451 FHPQCVQNPPTAGCARTSLCGAHATILPLCL 543
F P V+NPPT GC RT + GA T PL L
Sbjct: 402 FQPL*VRNPPTDGCDRTFI*GAQPTSTPLSL 310
Score = 63.8 bits (133), Expect(2) = 2e-039
Identities = 27/54 (50%), Positives = 32/54 (59%)
Frame = -1 / +2
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
CL WLD R P SVLYV +GS+A + E AW LA + FLWV+R V G
Sbjct: 110 CLTWLDTRKPCSVLYVCLGSLAVMSNEQLLEFAWGLASTNQSFLWVVRPDIVHG 271
Score = 33.6 bits (67), Expect(2) = 1e-021
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1 / -1
Query: 628 HRNGTPLPASAHAVSSNTARSTRATLPMLTYRTERGGRASSHAK 759
H+ + A+ A S + + A LP TY+TE G R S+H +
Sbjct: 243 HKKDWLVEANPQANSRSCSLDITARLPKQTYKTEHGFRVSNHVR 112
>gb|DR744031.1|DR744031 RTCU1_19_G01.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_19_G01_A029 5', mRNA sequence
Length = 795
Score = 113 bits (241), Expect(2) = 2e-037
Identities = 45/104 (43%), Positives = 66/104 (63%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + RG +V W PQ +VL+HP+VGGF TH GW S +E+IS GVPM+ P +AEQ NA+
Sbjct: 374 EETKDRGLLVGWVPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMICWPFYAEQHTNAK 553
Query: 371 YVTHQWGIGYEVGKPLERTAMAKAARKLMAGELGPQGPRERARL 240
+V +W IG + + ++R +A R L+ G+ G + R +L
Sbjct: 554 FVCEEWSIGLHLKQTVKRQEVAALVRNLIEGQEGVKMRRRIGKL 685
Score = 62.9 bits (131), Expect(2) = 2e-037
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = -1 / +2
Query: 764 TCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
+CL WLD++ P SV+YV +GS+ + E AW LA S FLWV+R+ V G
Sbjct: 179 SCLTWLDSQNPCSVMYVCLGSITVLSNQQLLEFAWGLASSNQHFLWVVRQDIVHG 343
>gb|DR024314.1|DR024314 STRS1_64_C03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_64_C03_A034 3', mRNA sequence
Length = 729
Score = 111 bits (238), Expect(2) = 1e-036
Identities = 46/89 (51%), Positives = 57/89 (64%)
Frame = -1 / +1
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + RG V WAPQ VL+HP+VGGF TH GW S VE+I GVPM+ P FAEQ N R
Sbjct: 211 ERSQGRGFFVTWAPQSRVLSHPSVGGFLTHSGWNSTVESICAGVPMICWPFFAEQQTNRR 390
Query: 371 YVTHQWGIGYEVGKPLERTAMAKAARKLM 285
+V H W IG+E+ + + R + RKLM
Sbjct: 391 FVDHIWKIGFEMPEEVSRENVEALVRKLM 477
Score = 61.6 bits (128), Expect(2) = 1e-036
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = -1 / +1
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
CL WLD + SV+YVS GS+ + E AW L S +PFLW +R V+G
Sbjct: 19 CLEWLDEQRVSSVMYVSFGSITVISDEQLREFAWGLEASNLPFLWAIRPDLVQG 180
>gb|DR015214.1|DR015214 STRS1_2_D11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_D11_A034 3', mRNA sequence
Length = 839
Score = 84.0 bits (177), Expect(3) = 1e-036
Identities = 30/70 (42%), Positives = 46/70 (65%)
Frame = -1 / +1
Query: 527 IVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYVTHQWGI 348
I+ WAPQ +LAHPA GGF HCGW +++E + GVPM+ P +AEQ N+++V + I
Sbjct: 280 ILGWAPQLSILAHPATGGFLFHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFVVDEIQI 459
Query: 347 GYEVGKPLER 318
E + +++
Sbjct: 460 AIEAPQRIDQ 489
Score = 71.6 bits (150), Expect(3) = 1e-036
Identities = 33/62 (53%), Positives = 37/62 (59%)
Frame = -1 / +1
Query: 785 GQDAPDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSV 606
G D + CL WLDA+ SVLY+S GS + A EE A L GSGV FLWVLRR S
Sbjct: 13 GVDTDENKCLEWLDAQVEASVLYISFGSENSISIAQTEELAMGLEGSGVKFLWVLRRPSD 192
Query: 605 RG 600
G
Sbjct: 193 SG 198
Score = 35.9 bits (72), Expect(3) = 1e-036
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -1 / +1
Query: 257 RERARLLKAQAKQCVAEGGGISLALDGLVDYICSL 153
RER R LKA A+ VAEGG LD V I SL
Sbjct: 565 RERVRELKAAARAAVAEGGSSHANLDLFVSEIMSL 669
>gb|BX676981.1|BX676981 BX676981 RN Pinus pinaster cDNA clone RN15E7, mRNA sequence
Length = 565
Score = 115 bits (246), Expect(2) = 2e-035
Identities = 51/107 (47%), Positives = 66/107 (61%)
Frame = -1 / +1
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E V+ R +V+WAPQ +VL+HP+VGGF TH GW S +E+I GVPM+ P FAEQ N R
Sbjct: 202 EKVKDRSFLVSWAPQIKVLSHPSVGGFLTHSGWNSTLESIYAGVPMISWPFFAEQQTNRR 381
Query: 371 YVTHQWGIGYEVGKPLERTAMAKAARKLMAGELGPQGPRERARLLKA 231
+V+ W IG E+ + + R + K R LM GE G Q RL A
Sbjct: 382 FVSEVWKIGMEMNEVVRREDVEKMVRMLMRGEEGRQMKMRIERLRDA 522
Score = 54.2 bits (112), Expect(2) = 2e-035
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = -1 / +1
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
C+ WL+++ P SV+YV GS+ + E AW L S PF+W +R + G
Sbjct: 10 CVKWLNSQEPSSVIYVCFGSITVISDKELVEFAWGLEASKQPFVWGIRPDLIHG 171
>gb|DR019261.1|DR019261 STRS1_28_F11.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_F11_A034 5', mRNA sequence
Length = 835
Score = 85.8 bits (181), Expect(3) = 3e-035
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = -1 / +3
Query: 527 IVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYVTHQWGI 348
I+ WAPQ +LAHPA GGF +HCGW +++E + GVPM+ P +AEQ N+++V + I
Sbjct: 333 ILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQPFNSKFVVDEIQI 512
Query: 347 GYEVGKPLER 318
E + +++
Sbjct: 513 ALEAPQRIDQ 542
Score = 62.9 bits (131), Expect(3) = 3e-035
Identities = 28/62 (45%), Positives = 34/62 (54%)
Frame = -1 / +3
Query: 785 GQDAPDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSV 606
G + + CL WLDA+ SVLY+S GS + A EE A L SG F+WVLR S
Sbjct: 66 GLNTEEEKCLEWLDAQREASVLYISFGSENSISSAQIEELAMGLEASGTKFVWVLRTPSD 245
Query: 605 RG 600
G
Sbjct: 246 TG 251
Score = 38.2 bits (77), Expect(3) = 3e-035
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = -1 / +3
Query: 293 KLMAGELGPQGPRERARLLKAQAKQCVAEGGGISLALDGLVDYICSL* 150
KL+ E Q RER R LKA A+ VAEGG + LD V + SL*
Sbjct: 582 KLLMMEEKGQELRERVRELKAVARAAVAEGGSSAKNLDLFVSEVMSL* 725
>gb|CO172600.1|CO172600 NDL1_30_E11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_30_E11_A029 5', mRNA sequence
Length = 820
Score = 85.8 bits (181), Expect(3) = 3e-035
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = -1 / +1
Query: 527 IVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYVTHQWGI 348
I+ WAPQ +LAHPA GGF +HCGW +++E + GVPM+ P +AEQ N+++V + I
Sbjct: 346 ILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQPFNSKFVVDEIQI 525
Query: 347 GYEVGKPLER 318
E + +++
Sbjct: 526 ALEAPQRIDQ 555
Score = 62.9 bits (131), Expect(3) = 3e-035
Identities = 28/62 (45%), Positives = 34/62 (54%)
Frame = -1 / +1
Query: 785 GQDAPDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSV 606
G + + CL WLDA+ SVLY+S GS + A EE A L SG F+WVLR S
Sbjct: 79 GLNTEEEKCLEWLDAQREASVLYISFGSENSISSAQIEELAMGLEASGTKFVWVLRTPSD 258
Query: 605 RG 600
G
Sbjct: 259 TG 264
Score = 38.2 bits (77), Expect(3) = 3e-035
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = -1 / +1
Query: 293 KLMAGELGPQGPRERARLLKAQAKQCVAEGGGISLALDGLVDYICSL* 150
KL+ E Q RER R LKA A+ VAEGG + LD V + SL*
Sbjct: 595 KLLMMEEKGQELRERVRELKAVARAAVAEGGSSAKNLDLFVSEVMSL* 738
>gb|DR019177.1|DR019177 STRS1_28_F11.b2_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_F11_A034 3', mRNA sequence
Length = 792
Score = 85.8 bits (181), Expect(3) = 3e-035
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = -1 / +3
Query: 527 IVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYVTHQWGI 348
I+ WAPQ +LAHPA GGF +HCGW +++E + GVPM+ P +AEQ N+++V + I
Sbjct: 276 ILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQPFNSKFVVDEIQI 455
Query: 347 GYEVGKPLER 318
E + +++
Sbjct: 456 ALEAPQRIDQ 485
Score = 62.9 bits (131), Expect(3) = 3e-035
Identities = 28/62 (45%), Positives = 34/62 (54%)
Frame = -1 / +3
Query: 785 GQDAPDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSV 606
G + + CL WLDA+ SVLY+S GS + A EE A L SG F+WVLR S
Sbjct: 9 GLNTEEEKCLEWLDAQREASVLYISFGSENSISSAQIEELAMGLEASGTKFVWVLRTPSD 188
Query: 605 RG 600
G
Sbjct: 189 TG 194
Score = 38.2 bits (77), Expect(3) = 3e-035
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = -1 / +3
Query: 293 KLMAGELGPQGPRERARLLKAQAKQCVAEGGGISLALDGLVDYICSL* 150
KL+ E Q RER R LKA A+ VAEGG + LD V + SL*
Sbjct: 525 KLLMMEEKGQELRERVRELKAVARAAVAEGGSSAKNLDLFVSEVMSL* 668
>gb|DR021519.1|DR021519 STRS1_45_E08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_45_E08_A034 3', mRNA sequence
Length = 820
Score = 85.4 bits (180), Expect(3) = 8e-035
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = -1 / +2
Query: 527 IVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYVTHQWGI 348
I+ WAPQ +LAHPA GGF +HCGW +++E + GVPM+ P +AEQ N+++V + I
Sbjct: 266 ILGWAPQLSILAHPATGGFLSHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFVVDEIQI 445
Query: 347 GYEVGKPLER 318
E + +++
Sbjct: 446 AIEAPQRIDQ 475
Score = 64.3 bits (134), Expect(3) = 8e-035
Identities = 29/60 (48%), Positives = 35/60 (58%)
Frame = -1 / +2
Query: 779 DAPDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
D + CL WLDA+ SVLY+S GS + A EE A L SGV FLWV+R+ S G
Sbjct: 5 DTDENKCLEWLDAQVEASVLYISFGSENSISIAQTEELAMGLEASGVKFLWVVRKPSDSG 184
Score = 35.9 bits (72), Expect(3) = 8e-035
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -1 / +2
Query: 257 RERARLLKAQAKQCVAEGGGISLALDGLVDYICSL 153
RER R LKA A+ VAEGG LD V I SL
Sbjct: 551 RERVRELKAAARAAVAEGGSSHANLDLFVSEIMSL 655
>gb|CF667004.1|CF667004 RTCNT1_27_C11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_27_C11_A029 5', mRNA sequence
Length = 801
Score = 85.8 bits (181), Expect(3) = 1e-034
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = -1 / +1
Query: 527 IVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYVTHQWGI 348
I+ WAPQ +LAHPA GGF +HCGW +++E + GVPM+ P +AEQ N+++V + I
Sbjct: 244 ILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQPFNSKFVVDEIQI 423
Query: 347 GYEVGKPLER 318
E + +++
Sbjct: 424 ALEAPQRIDQ 453
Score = 61.1 bits (127), Expect(3) = 1e-034
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -1 / +1
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
CL WLDA+ SVLY+S GS + A EE A L SG F+WVLR S G
Sbjct: 1 CLEWLDAQREASVLYISFGSENSISSAQIEELAMGLEASGTKFVWVLRTPSDTG 162
Score = 38.2 bits (77), Expect(3) = 1e-034
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = -1 / +1
Query: 293 KLMAGELGPQGPRERARLLKAQAKQCVAEGGGISLALDGLVDYICSL* 150
KL+ E Q RER R LKA A+ VAEGG + LD V + SL*
Sbjct: 493 KLLMMEEKGQELRERVRELKAVARAAVAEGGSSAKNLDLFVSEVMSL* 636
>gb|CO165223.1|CO165223 FLD1_53_D08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_53_D08_A029 3', mRNA sequence
Length = 833
Score = 104 bits (222), Expect(2) = 3e-034
Identities = 42/94 (44%), Positives = 58/94 (61%)
Frame = -1 / +3
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E V+ R +V WAPQ +VL+HP+VG F TH GW S +E+I GVPM+ P AEQ N R
Sbjct: 351 EKVKDRSFLVGWAPQMKVLSHPSVGSFLTHSGWNSTLESICAGVPMISWPFLAEQPTNRR 530
Query: 371 YVTHQWGIGYEVGKPLERTAMAKAARKLMAGELG 270
+V+ W IG + + + R + ++LM GE G
Sbjct: 531 FVSGVWNIGMAMNEVVSREDVGDIVKRLMGGEEG 632
Score = 61.1 bits (127), Expect(2) = 3e-034
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = -1 / +3
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
C+ WLD++ P SV+Y+ GS+A + E AW + S PFLWV+R + G
Sbjct: 159 CMKWLDSQKPYSVIYICFGSIAVMTNQELLELAWGIEASKQPFLWVIRPDLIHG 320
>gb|CO363521.1|CO363521 RTK1_10_F05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_10_F05_A029 3', mRNA sequence
Length = 863
Score = 100 bits (214), Expect(2) = 7e-034
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E R +G +V W+ Q +VL+HP+VGGF THCGW S++E++S GVPML P F +Q N
Sbjct: 380 EETRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLSFGVPMLAFPLFTDQCTNRW 559
Query: 371 YVTHQWGIGYEVG 333
+ +WG+G ++G
Sbjct: 560 LIVEEWGVGMDLG 598
Score = 63.4 bits (132), Expect(2) = 7e-034
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = -1 / +2
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
C WLD++ SV+Y+S GS+A V RA EE A L S PF+WVLR
Sbjct: 185 CTGWLDSQGKNSVIYISFGSLAHVSRAQIEEVAMGLVESKQPFIWVLR 328
>gb|DR069312.1|DR069312 RTDK1_6_H08.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_6_H08_A029 3', mRNA sequence
Length = 775
Score = 100 bits (212), Expect(2) = 1e-033
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E R +G +V W+ Q +VL+HP+VGGF THCGW S++E++S GVP LV P F +Q N
Sbjct: 236 EETRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLSFGVPRLVFPLFTDQCTNRW 415
Query: 371 YVTHQWGIGYEVG 333
+ +WG+G ++G
Sbjct: 416 LIVEEWGVGMDLG 454
Score = 63.4 bits (132), Expect(2) = 1e-033
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = -1 / +2
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
C WLD++ SV+Y+S GS+A V RA EE A L S PF+WVLR
Sbjct: 41 CTGWLDSQGKNSVIYISFGSLAHVSRAQIEEVAMGLVESKQPFIWVLR 184
>gb|BX255284.1|BX255284 BX255284 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP004A03 similar to Flavonol 3 O
glucosyltransferase, mRNA sequence
Length = 592
Score = 121 bits (259), Expect(2) = 1e-033
Identities = 48/92 (52%), Positives = 64/92 (69%)
Frame = -1 / +3
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + RG +V WAPQ +VL+HP+VGGF TH GW S +E+IS GVPM+ P FAEQ NA+
Sbjct: 165 EETKDRGVLVGWAPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMMCWPFFAEQETNAK 344
Query: 371 YVTHQWGIGYEVGKPLERTAMAKAARKLMAGE 276
+V +WGIG +V K ++R +A R L+ GE
Sbjct: 345 FVCEEWGIGMQVKKMVKREELAILVRNLIKGE 440
Score = 41.8 bits (85), Expect(2) = 1e-033
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = -1 / +3
Query: 728 SVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
SVL V +GS+A + E AW LA S FLWV+R V G
Sbjct: 6 SVLTVCLGSLAVMSNEQLLEFAWGLASSNQSFLWVVRPDIVHG 134
>gb|DR024455.1|DR024455 STRS1_65_C08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_65_C08_A034 3', mRNA sequence
Length = 825
Score = 106 bits (226), Expect(2) = 3e-033
Identities = 43/96 (44%), Positives = 60/96 (62%)
Frame = -1 / -3
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E V+ R +WAPQ VL+HP+VGGF TH GW S +E+I GVPM+ P F+EQ N R
Sbjct: 289 EKVKDRSFFASWAPQMTVLSHPSVGGFLTHSGWNSTLESICAGVPMISWPFFSEQPTNRR 110
Query: 371 YVTHQWGIGYEVGKPLERTAMAKAARKLMAGELGPQ 264
+V+ W IG + + ++R + +LM+GE G Q
Sbjct: 109 FVSEVWKIGLAMNENVKREHVKDMVTRLMSGEEGKQ 2
Score = 56.1 bits (116), Expect(2) = 3e-033
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = -1 / -3
Query: 776 APDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
A + C+ WLD++ P SV+YV GS + E AW L S PFLW +R + G
Sbjct: 496 AEETGCVKWLDSQDPCSVIYVCFGSFTVMSEEELLEFAWGLEASRQPFLWSIRPDVIHG 320
>gb|CO161081.1|CO161081 FLD1_26_C01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_26_C01_A029 5', mRNA sequence
Length = 919
Score = 87.2 bits (184), Expect(3) = 1e-032
Identities = 34/69 (49%), Positives = 46/69 (66%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E +++G +V W Q VL+HP+VGGF+TH GW S +E++S GVPMLV P +Q N
Sbjct: 362 EKTKNQGLVVPWCTQLSVLSHPSVGGFFTHGGWNSTMESLSLGVPMLVFPQGIDQYTNRM 541
Query: 371 YVTHQWGIG 345
V +QW IG
Sbjct: 542 LVVNQWKIG 568
Score = 62.5 bits (130), Expect(3) = 1e-032
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = -1 / +2
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRG 612
C WLD++ SVLYVS GS+AR+ R EE A L SG FLWV+R G
Sbjct: 164 CSQWLDSKARSSVLYVSFGSLARMSRTQVEEIAMGLLESGQNFLWVVRPG 313
Score = 28.6 bits (56), Expect(3) = 1e-032
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1 / +2
Query: 299 ARKLMAGELGPQGPRERARLLKAQAKQCVAEGGGISLALDGLVDYI 162
A K + G + R ++ ++ +Q +EGG + L L DYI
Sbjct: 626 AVKFLVGSKAGEEMRRKSNEIRETIRQAASEGGSSWVNLQRLADYI 763
>gb|DR015919.1|DR015919 STRS1_6_B08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_6_B08_A034 5', mRNA sequence
Length = 775
Score = 87.2 bits (184), Expect(3) = 2e-032
Identities = 34/69 (49%), Positives = 46/69 (66%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E +++G +V W Q VL+HP+VGGF+TH GW S +E++S GVPMLV P +Q N
Sbjct: 260 EKTKNQGLVVPWCTQLSVLSHPSVGGFFTHGGWNSTMESLSLGVPMLVFPQGIDQYTNRM 439
Query: 371 YVTHQWGIG 345
V +QW IG
Sbjct: 440 LVVNQWKIG 466
Score = 61.6 bits (128), Expect(3) = 2e-032
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = -1 / +2
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRG 612
C WLD++ SVLYVS GS+AR+ R EE A L SG FLWV+R G
Sbjct: 62 CSQWLDSKARCSVLYVSFGSLARMSRTQVEEIAMGLLESGQNFLWVVRPG 211
Score = 28.6 bits (56), Expect(3) = 2e-032
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1 / +2
Query: 299 ARKLMAGELGPQGPRERARLLKAQAKQCVAEGGGISLALDGLVDYI 162
A K + G + R ++ ++ +Q +EGG + L L DYI
Sbjct: 524 AVKFLVGSKAGEEMRRKSNEIRETIRQAASEGGSSWVNLQRLADYI 661
>gb|CO364236.1|CO364236 RTK1_14_B09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_14_B09_A029 5', mRNA sequence
Length = 879
Score = 93.2 bits (197), Expect(2) = 3e-032
Identities = 32/72 (44%), Positives = 51/72 (70%)
Frame = -1 / -3
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
+ ++ +G +V W Q +VL+HP+V GF THCGW SM+E+I+ GVPM+ P +A+Q N++
Sbjct: 469 DEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIAGGVPMVGFPLWADQFTNSK 290
Query: 371 YVTHQWGIGYEV 336
+ +W IGY +
Sbjct: 289 LMVDEWKIGYRL 254
Score = 65.7 bits (137), Expect(2) = 3e-032
Identities = 28/48 (58%), Positives = 31/48 (64%)
Frame = -1 / -3
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
C WLDA+P RSVLYVS GS+ V +A EE A L SG FLW LR
Sbjct: 664 CSEWLDAKPNRSVLYVSFGSMVHVTKAQLEEIAMGLKDSGQLFLWALR 521
>gb|CF470929.1|CF470929 RTDS1_15_D01.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_15_D01_A015 5', mRNA sequence
Length = 782
Score = 93.2 bits (197), Expect(2) = 3e-032
Identities = 32/72 (44%), Positives = 51/72 (70%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
+ ++ +G +V W Q +VL+HP+V GF THCGW SM+E+I+ GVPM+ P +A+Q N++
Sbjct: 308 DEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIAGGVPMVGFPLWADQFTNSK 487
Query: 371 YVTHQWGIGYEV 336
+ +W IGY +
Sbjct: 488 LMVDEWKIGYRL 523
Score = 65.7 bits (137), Expect(2) = 3e-032
Identities = 28/48 (58%), Positives = 31/48 (64%)
Frame = -1 / +2
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
C WLDA+P RSVLYVS GS+ V +A EE A L SG FLW LR
Sbjct: 113 CSEWLDAKPNRSVLYVSFGSMVHVTKAQLEEIAMGLKDSGQLFLWALR 256
>gb|CF470501.1|CF470501 RTDS1_17_D08.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_17_D08_A015 5', mRNA sequence
Length = 677
Score = 93.2 bits (197), Expect(2) = 3e-032
Identities = 32/72 (44%), Positives = 51/72 (70%)
Frame = -1 / +3
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
+ ++ +G +V W Q +VL+HP+V GF THCGW SM+E+I+ GVPM+ P +A+Q N++
Sbjct: 336 DEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIAGGVPMVGFPLWADQFTNSK 515
Query: 371 YVTHQWGIGYEV 336
+ +W IGY +
Sbjct: 516 LMVDEWKIGYRL 551
Score = 65.7 bits (137), Expect(2) = 3e-032
Identities = 28/48 (58%), Positives = 31/48 (64%)
Frame = -1 / +3
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
C WLDA+P RSVLYVS GS+ V +A EE A L SG FLW LR
Sbjct: 141 CSEWLDAKPNRSVLYVSFGSMVHVTKAQLEEIAMGLKDSGQLFLWALR 284
>gb|BX250474.1|BX250474 BX250474 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP037D07 similar to Flavonol 3 O
glucosyltransferase, mRNA sequence
Length = 656
Score = 94.5 bits (200), Expect(2) = 3e-032
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = -1 / +1
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E R +G +V W+ Q +VL+HP+VGGF THCGW S++E++ G PML P +Q VN R
Sbjct: 211 EGTRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLWLGKPMLAFPLLTDQCVNRR 390
Query: 371 YVTHQWGIGYEVG 333
+ +WG+ ++G
Sbjct: 391 LIVEEWGVAMDLG 429
Score = 64.3 bits (134), Expect(2) = 3e-032
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -1 / +1
Query: 773 PDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
P+ C WLD+ P SV+Y+S GS A V R EE A L S PF+WVLR
Sbjct: 4 PEADCTGWLDSMPNSSVIYISFGSYAHVSRDQIEEMAMGLLESKQPFIWVLR 159
>gb|DR018619.1|DR018619 STRS1_24_A10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_24_A10_A034 5', mRNA sequence
Length = 730
Score = 132 bits (283), Expect(2) = 4e-032
Identities = 57/142 (40%), Positives = 79/142 (55%)
Frame = -1 / +1
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRGXXXXXX 582
C WLD++ SVLYVS GS+ R+ EE A L SG FLWV+R G +
Sbjct: 55 CSQWLDSKARSSVLYVSFGSLVRMSETQVEEIAMGLVESGQTFLWVVRPGMLNSDKDTND 234
Query: 581 XXXXXXXELRETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQP 402
E +++ +V W+PQ VL+HP+VGGF+TH GW S +E++S GVPMLV P
Sbjct: 235 HGSVLPEGFLEKTKNQALVVPWSPQLSVLSHPSVGGFFTHGGWNSTMESLSLGVPMLVWP 414
Query: 401 CFAEQIVNARYVTHQWGIGYEV 336
+Q N V +Q +G ++
Sbjct: 415 QGIDQYTNRMLVVNQLKVGLKL 480
Score = 25.8 bits (50), Expect(2) = 4e-032
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1 / +1
Query: 257 RERARLLKAQAKQCVAEGGGISLALDGLVDYI 162
R ++R ++ +Q +EGG ++ VDYI
Sbjct: 571 RRKSREIRETIQQAASEGGSSWRSMQRFVDYI 666
>gb|DR180536.1|DR180536 RTMNUT1_33_F10.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_33_F10_A029 3', mRNA sequence
Length = 811
Score = 94.5 bits (200), Expect(2) = 6e-032
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = -1 / +1
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E R +G +V W+ Q +VL+HP+VGGF THCGW S++E++ G PML P +Q VN R
Sbjct: 301 EGTRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLWLGKPMLAFPLLTDQCVNRR 480
Query: 371 YVTHQWGIGYEVG 333
+ +WG+ ++G
Sbjct: 481 LIVEEWGVAMDLG 519
Score = 63.4 bits (132), Expect(2) = 6e-032
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = -1 / +1
Query: 773 PDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
P+ C +WLD+ P SV+Y+S GS A V R +E A L S PF+WVLR
Sbjct: 94 PESDCTSWLDSMPNSSVIYISFGSYAHVSRDQIQEMAMGLLESKQPFIWVLR 249
>gb|CO176349.1|CO176349 NDL1_61_A07.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_61_A07_A029 5', mRNA sequence
Length = 795
Score = 94.5 bits (200), Expect(2) = 6e-032
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = -1 / +1
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E R +G +V W+ Q +VL+HP+VGGF THCGW S++E++ G PML P +Q VN R
Sbjct: 484 EGTRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLWLGKPMLAFPLLTDQCVNRR 663
Query: 371 YVTHQWGIGYEVG 333
+ +WG+ ++G
Sbjct: 664 LIVEEWGVAMDLG 702
Score = 63.4 bits (132), Expect(2) = 6e-032
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = -1 / +1
Query: 773 PDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
P+ C +WLD+ P SV+Y+S GS A V R +E A L S PF+WVLR
Sbjct: 277 PESDCTSWLDSMPNSSVIYISFGSYAHVSRDQIQEMAMGLLESKQPFIWVLR 432
>gb|CO159636.1|CO159636 FLD1_14_G06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_14_G06_A029 5', mRNA sequence
Length = 763
Score = 94.5 bits (200), Expect(2) = 6e-032
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E R +G +V W+ Q +VL+HP+VGGF THCGW S++E++ G PML P +Q VN R
Sbjct: 530 EGTRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLWLGKPMLAFPLLTDQCVNRR 709
Query: 371 YVTHQWGIGYEVG 333
+ +WG+ ++G
Sbjct: 710 LIVEEWGVAMDLG 748
Score = 63.4 bits (132), Expect(2) = 6e-032
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = -1 / +2
Query: 773 PDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
P+ C +WLD+ P SV+Y+S GS A V R +E A L S PF+WVLR
Sbjct: 323 PESDCTSWLDSMPNSSVIYISFGSYAHVSRDQIQEMAMGLLESKQPFIWVLR 478
>gb|CF474107.1|CF474107 RTWW2_18_C05.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_18_C05_A021 5', mRNA sequence
Length = 817
Score = 85.4 bits (180), Expect(3) = 7e-032
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = -1 / +3
Query: 527 IVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYVTHQWGI 348
I+ WAPQ +LAHPA GGF +HCGW +++E + GVPM+ P +AEQ N+++V + I
Sbjct: 294 ILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFVVDEIQI 473
Query: 347 GYEVGKPLE 321
E + ++
Sbjct: 474 ALEAPQRID 500
Score = 61.1 bits (127), Expect(3) = 7e-032
Identities = 27/62 (43%), Positives = 34/62 (54%)
Frame = -1 / +3
Query: 785 GQDAPDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSV 606
G + + CL WLDA+ SVLY+S GS + + EE A L SG F+WVLR S
Sbjct: 27 GLNTEEDKCLEWLDAQAEASVLYISFGSENSISISQIEELAMGLEASGTKFVWVLRTPSD 206
Query: 605 RG 600
G
Sbjct: 207 TG 212
Score = 29.0 bits (57), Expect(3) = 7e-032
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1 / +3
Query: 293 KLMAGELGPQGPRERARLLKAQAKQCVAEGGGISLALDGLVDYICSL* 150
K++ E Q RER LK + VAEGG + L+ V I SL*
Sbjct: 543 KMLMMEETGQELRERVGELKTAVRAAVAEGGSSTKNLNLFVSEIMSL* 686
>gb|DR117368.1|DR117368 RTMG1_6_C05.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_C05_A029 5', mRNA sequence
Length = 935
Score = 93.6 bits (198), Expect(2) = 1e-031
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = -1 / +1
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E R +G +V W+ Q +VL+HP+VGGF THCGW S++E++ G PML P +Q VN R
Sbjct: 322 EGTRDQGLVVQWSSQLKVLSHPSVGGFPTHCGWNSILESLWLGKPMLAFPLLTDQCVNRR 501
Query: 371 YVTHQWGIGYEVG 333
+ +WG+ ++G
Sbjct: 502 LIVEEWGVAMDLG 540
Score = 63.4 bits (132), Expect(2) = 1e-031
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = -1 / +1
Query: 773 PDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
P+ C +WLD+ P SV+Y+S GS A V R +E A L S PF+WVLR
Sbjct: 115 PESDCTSWLDSMPNSSVIYISFGSYAHVSRDQIQEMAMGLLESKQPFIWVLR 270
>gb|DR060675.1|DR060675 RTNIT1_29_G03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_29_G03_A029 3', mRNA sequence
Length = 852
Score = 113 bits (241), Expect(2) = 2e-031
Identities = 45/104 (43%), Positives = 66/104 (63%)
Frame = -1 / +1
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + RG +V W PQ +VL+HP+VGGF TH GW S +E+IS GVPM+ P +AEQ NA+
Sbjct: 157 EETKDRGLLVGWVPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMICWPFYAEQHTNAK 336
Query: 371 YVTHQWGIGYEVGKPLERTAMAKAARKLMAGELGPQGPRERARL 240
+V +W IG + + ++R +A R L+ G+ G + R +L
Sbjct: 337 FVCEEWSIGLHLKQTVKRQEVAALVRNLIEGQEGVKMRRRIGKL 468
Score = 43.2 bits (88), Expect(2) = 2e-031
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -1 / +1
Query: 725 VLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
V+YV +GS+ + E AW LA S FLWV+R+ V G
Sbjct: 1 VMYVCLGSITVLSNQQLLEFAWGLASSNQHFLWVVRQDIVHG 126
>gb|BX255181.1|BX255181 BX255181 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP112D05 similar to Flavonol 3 O
glucosyltransferase 5, mRNA sequence
Length = 687
Score = 123 bits (264), Expect(2) = 2e-031
Identities = 49/96 (51%), Positives = 66/96 (68%)
Frame = -1 / +1
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + RG +V WAPQ +VL+HP+VGGF TH GW S +E+IS GVPM+ P FAEQ NA+
Sbjct: 136 EETKGRGLLVGWAPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMMCWPFFAEQETNAK 315
Query: 371 YVTHQWGIGYEVGKPLERTAMAKAARKLMAGELGPQ 264
+V +WGIG +V K ++R +A R L+ GE G +
Sbjct: 316 FVCEEWGIGMQVKKMVKREELAMLVRNLIKGEEGDE 423
Score = 96.8 bits (205), Expect(2) = 9e-021
Identities = 46/91 (50%), Positives = 56/91 (61%)
Frame = +1 / -2
Query: 271 PSSPAISFLAAFAMAVLSSGFPTSYPMPHWCVTYLAFTICSAKHGCTSMGTPSDMASTMD 450
PSSP I FL + A + L + F T P+PH T LAF CSAK G +GTP+ M S ++
Sbjct: 416 PSSPLIKFLTSIANSSLFTIFFTCIPIPHSSHTNLAFVSCSAKKGQHIIGTPALMLSNVE 237
Query: 451 FHPQCVQNPPTAGCARTSLCGAHATILPLCL 543
FHP V+NPPT GC T + GAH T PL L
Sbjct: 236 FHPL*VRNPPTDGCDSTFI*GAHPTSRPLPL 144
Score = 32.7 bits (65), Expect(2) = 2e-031
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1 / +1
Query: 704 SVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
S+A + E AW LA S FLWV+R V+G
Sbjct: 1 SLAVLSNEELLEFAWGLASSNQSFLWVVRPDIVQG 105
Score = 23.5 bits (45), Expect(2) = 9e-021
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3 / -1
Query: 624 DPQERHAAAGQRPRRLLE 677
+PQER A Q PR+ E
Sbjct: 81 NPQERLVAGSQSPRKFQE 28
>gb|DR015862.1|DR015862 STRS1_6_D07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_6_D07_A034 3', mRNA sequence
Length = 890
Score = 92.3 bits (195), Expect(2) = 3e-031
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + R V WAPQ +VLAHP+VG F THCGW SM+E + GVP++ P FA+Q +N R
Sbjct: 251 ERTKKRALFVRWAPQVKVLAHPSVGLFLTHCGWNSMLENLGMGVPVVGFPYFADQFLNCR 430
Query: 371 YVTHQWGIGYE 339
+ W IG +
Sbjct: 431 FAKEVWNIGLD 463
Score = 63.4 bits (132), Expect(2) = 3e-031
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = -1 / +2
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
CL WLD + P SV+Y+S GS+A + E+ A L SG PFLWVLR
Sbjct: 59 CLTWLDMQRPGSVIYISFGSIAVKSKQQLEQLALGLENSGQPFLWVLR 202
>gb|DR112917.1|DR112917 RTS1_31_C10.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_31_C10_A029 5', mRNA sequence
Length = 622
Score = 95.5 bits (202), Expect(2) = 3e-031
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = -1 / +3
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E V+ R +V WAPQ +VL+HP+VGGF TH GW S +E+I GVPM+ P AEQ N +
Sbjct: 375 EKVKDRSFLVRWAPQMKVLSHPSVGGFLTHSGWNSTLESICAGVPMISWPLLAEQPTNRK 554
Query: 371 YVTHQWGIGYEVGKPLER 318
+V+ W IG + + + R
Sbjct: 555 FVSGVWNIGMAMNEVVRR 608
Score = 60.2 bits (125), Expect(2) = 3e-031
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = -1 / +3
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
C+ WLD + P SV+Y+ GS+A + E AW L S PFLWV+R + G
Sbjct: 183 CMKWLDCQKPCSVIYICFGSIAVMTDQELLELAWGLEASRQPFLWVIRPDLING 344
>gb|CO366516.1|CO366516 RTK1_28_G11.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_28_G11_A029 3', mRNA sequence
Length = 876
Score = 94.5 bits (200), Expect(2) = 5e-031
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = -1 / +1
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E R +G +V W+ Q +VL+HP+VGGF THCGW S++E++ G PML P +Q VN R
Sbjct: 202 EGTRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLWLGKPMLAFPLLTDQCVNRR 381
Query: 371 YVTHQWGIGYEVG 333
+ +WG+ ++G
Sbjct: 382 LIVEEWGVAMDLG 420
Score = 60.2 bits (125), Expect(2) = 5e-031
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = -1 / +1
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
C +WLD+ P SV+Y+S GS A V R +E A L S PF+WVLR
Sbjct: 7 CTSWLDSMPNSSVIYISFGSYAHVSRDQIQEMAMGLLESKQPFIWVLR 150
>gb|BQ699997.1|BQ699997 NXRV132_G06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV132_G06 5' similar to Arabidopsis thaliana
sequence At2g36970 putative glucosyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 539
Score = 94.5 bits (200), Expect(2) = 5e-031
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = -1 / +3
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E R +G +V W+ Q +VL+HP+VGGF THCGW S++E++ G PML P +Q VN R
Sbjct: 198 EGTRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLWLGKPMLAFPLLTDQCVNRR 377
Query: 371 YVTHQWGIGYEVG 333
+ +WG+ ++G
Sbjct: 378 LIVEEWGVAMDLG 416
Score = 60.2 bits (125), Expect(2) = 5e-031
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = -1 / +3
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
C +WLD+ P SV+Y+S GS A V R +E A L S PF+WVLR
Sbjct: 3 CTSWLDSMPNSSVIYISFGSYAHVSRDQIQEMAMGLLESKQPFIWVLR 146
>gb|CF470473.1|CF470473 RTDS1_17_C10.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_17_C10_A015 5', mRNA sequence
Length = 725
Score = 90.9 bits (192), Expect(2) = 1e-030
Identities = 31/72 (43%), Positives = 51/72 (70%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
+ ++ +G +V W Q +VL+HP+V GF THCGW SM+E+I+ GVP++ P +A+Q N++
Sbjct: 242 DEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIAGGVPIVGFPFWADQFTNSK 421
Query: 371 YVTHQWGIGYEV 336
+ +W IGY +
Sbjct: 422 LMADEWKIGYRL 457
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -1 / +2
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
C WLDA+P RSVLYVS GS+ V +A +E A L SG FLW LR
Sbjct: 47 CSKWLDAKPNRSVLYVSFGSMVFVTKAQLDEIAMGLKDSGQLFLWALR 190
>dbj|BD224494.1| Materials and methods for the modification of plant lignin content
Length = 762
Score = 121 bits (258), Expect(2) = 1e-030
Identities = 48/96 (50%), Positives = 65/96 (67%)
Frame = -1 / +3
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + RG +V WAPQ +VL+HP+VGGF TH GW S +E+IS GVPM+ P FAEQ NA+
Sbjct: 135 EETKDRGMLVGWAPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMMCWPFFAEQETNAK 314
Query: 371 YVTHQWGIGYEVGKPLERTAMAKAARKLMAGELGPQ 264
+V +WGIG +V K ++R +A R + GE G +
Sbjct: 315 FVCEEWGIGMQVKKMVKREELAILVRNSIKGEEGDE 422
Score = 32.2 bits (64), Expect(2) = 1e-030
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1 / +3
Query: 671 ETAWALAGSGVPFLWVLRRGSVRG 600
E AW LA S FLWV+R V G
Sbjct: 33 EFAWGLASSNQSFLWVVRSDIVHG 104
>gb|CO159644.1|CO159644 FLD1_14_H03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_14_H03_A029 5', mRNA sequence
Length = 773
Score = 98.2 bits (208), Expect(2) = 2e-030
Identities = 38/66 (57%), Positives = 46/66 (69%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E ++RG V+WAPQ +VL HP+VGGF TH GW S VE+I GVPM+ P FAEQ N R
Sbjct: 575 ERSKNRGFFVSWAPQYKVLCHPSVGGFLTHSGWNSTVESICAGVPMMCWPFFAEQQTNRR 754
Query: 371 YVTHQW 354
+V H W
Sbjct: 755 FVDHVW 772
Score = 54.7 bits (113), Expect(2) = 2e-030
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = -1 / +2
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
CL WLD + SV+YV GS+ + E AW L S PFLW +R V G
Sbjct: 383 CLDWLDKQRVSSVVYVCFGSITVLTNEELIEFAWGLEASNKPFLWAIRPDLVEG 544
>gb|CF397284.1|CF397284 RTDS3_2_C09.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_2_C09_A022 5', mRNA sequence
Length = 736
Score = 95.0 bits (201), Expect(2) = 2e-030
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = -1 / +3
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
+ + +G +V W Q +VL+HP+V GF THCGW SM+E+IS GVPM+ P +A+Q N +
Sbjct: 339 DEIERQGLVVPWCNQLQVLSHPSVAGFITHCGWNSMLESISRGVPMIGFPFWADQFTNCK 518
Query: 371 YVTHQWGIGYEV 336
+ +W IGY +
Sbjct: 519 LMADEWKIGYSL 554
Score = 57.9 bits (120), Expect(2) = 2e-030
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / +3
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
C WLDA+P SV+YVS GS+ A +E A L SG FLWVLR
Sbjct: 144 CSEWLDAKPTCSVIYVSFGSLIHATMAQLDEIAMGLKDSGQFFLWVLR 287
>gb|DR018139.1|DR018139 STRS1_20_E09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_20_E09_A034 5', mRNA sequence
Length = 581
Score = 80.8 bits (170), Expect(2) = 3e-030
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = -1 / +1
Query: 527 IVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYV 366
I+ WAPQ +LAHPA GGF +HCGW +++E + GVPM+ P +A+Q N+++V
Sbjct: 418 ILGWAPQLSILAHPATGGFLSHCGWNAVLETTTMGVPMIAWPLYAKQHFNSKFV 579
Score = 71.6 bits (150), Expect(2) = 3e-030
Identities = 33/62 (53%), Positives = 37/62 (59%)
Frame = -1 / +1
Query: 785 GQDAPDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSV 606
G D + CL WLDA+ SVLY+S GS + A EE A L GSGV FLWVLRR S
Sbjct: 151 GVDTDENKCLEWLDAQVEASVLYISFGSENSISIAQTEELAMGLEGSGVKFLWVLRRPSD 330
Query: 605 RG 600
G
Sbjct: 331 SG 336
>gb|DR099835.1|DR099835 STRR1_59_B12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_59_B12_A033 3', mRNA sequence
Length = 818
Score = 132 bits (283), Expect = 3e-030
Identities = 57/142 (40%), Positives = 79/142 (55%)
Frame = -1 / -3
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRGXXXXXX 582
C WLD++ SVLYVS GS+ R+ EE A L SG FLWV+R G +
Sbjct: 564 CSQWLDSKARSSVLYVSFGSLVRMSETQVEEIAMGLVESGQTFLWVVRPGMLNSDKDTND 385
Query: 581 XXXXXXXELRETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQP 402
E +++ +V W+PQ VL+HP+VGGF+TH GW S +E++S GVPMLV P
Sbjct: 384 HGSVLPEGFLEKTKNQALVVPWSPQLSVLSHPSVGGFFTHGGWNSTMESLSLGVPMLVWP 205
Query: 401 CFAEQIVNARYVTHQWGIGYEV 336
+Q N V +Q +G ++
Sbjct: 204 QGIDQYTNRMLVVNQLKVGLKL 139
>gb|CV031446.1|CV031446 RTNACL1_1_D07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_1_D07_A029 5', mRNA sequence
Length = 734
Score = 86.8 bits (183), Expect(2) = 3e-030
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = -1 / +3
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + R V WAPQ +VLAH AVG F THCGW S +E+IS GVP++ P FA+Q ++ R
Sbjct: 375 ERTKDRTLFVQWAPQLKVLAHAAVGLFITHCGWNSTLESISLGVPVVGLPYFADQFLHCR 554
Query: 371 YVTHQWGIGYE 339
+ W IG +
Sbjct: 555 FAKDVWKIGLD 587
Score = 65.2 bits (136), Expect(2) = 3e-030
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = -1 / +3
Query: 770 DPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
D CL WLD + P SV+Y+S GS+A + ++ A L G+G PFLWVLR
Sbjct: 174 DEGCLTWLDMQQPASVIYISFGSIAVKSQEQLQQLALGLEGTGQPFLWVLR 326
>gb|CF403057.1|CF403057 RTWW1_24_E04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_24_E04_A015 5', mRNA sequence
Length = 672
Score = 90.4 bits (191), Expect(2) = 3e-030
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = -1 / +3
Query: 542 RHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYVT 363
+ RG +V W Q VL+HP++GGF++HCGW S +E+IS G+P+L P EQ VN +++
Sbjct: 387 KQRGVVVPWCSQLNVLSHPSIGGFFSHCGWNSTLESISFGLPILGFPLGGEQFVNCKFIV 566
Query: 362 HQWGIG 345
+W IG
Sbjct: 567 DEWKIG 584
Score = 61.6 bits (128), Expect(2) = 3e-030
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = -1 / +3
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRR 615
C WLD +PP+SV+YVS GS+ V + EE A L S F+WVLRR
Sbjct: 180 CTQWLDDKPPKSVIYVSFGSLLPVSISQTEEIAMGLKASDYSFIWVLRR 326
>gb|DT626044.1|DT626044 EST1157968 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA647 5' end, mRNA sequence
Length = 967
Score = 85.4 bits (180), Expect(2) = 5e-030
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = -1 / +3
Query: 527 IVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYVTHQWGI 348
I+ WAPQ +LAHPA GGF +HCGW +++E + GVPM+ P +AEQ N+++V + I
Sbjct: 645 ILGWAPQLSILAHPATGGFLSHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFVVDEIQI 824
Query: 347 GYEVGKPLER 318
E + +++
Sbjct: 825 AIEAPQRIDQ 854
Score = 66.1 bits (138), Expect(2) = 5e-030
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = -1 / +3
Query: 785 GQDAPDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSV 606
G D + CL WLDA+ SVLY+S GS + A EE A L SGV FLWV+R+ S
Sbjct: 378 GVDTDENKCLEWLDAQVEASVLYISFGSENSISIAQTEELAMGLEASGVKFLWVVRKPSD 557
Query: 605 RG 600
G
Sbjct: 558 SG 563
>gb|CV134986.1|CV134986 EST846195 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PICCI10 5' end, mRNA sequence
Length = 906
Score = 85.4 bits (180), Expect(2) = 5e-030
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = -1 / +3
Query: 527 IVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYVTHQWGI 348
I+ WAPQ +LAHPA GGF +HCGW +++E + GVPM+ P +AEQ N+++V + I
Sbjct: 645 ILGWAPQLSILAHPATGGFLSHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFVVDEIQI 824
Query: 347 GYEVGKPLER 318
E + +++
Sbjct: 825 AIEAPQRIDQ 854
Score = 66.1 bits (138), Expect(2) = 5e-030
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = -1 / +3
Query: 785 GQDAPDPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSV 606
G D + CL WLDA+ SVLY+S GS + A EE A L SGV FLWV+R+ S
Sbjct: 378 GVDTDENKCLEWLDAQVEASVLYISFGSENSISIAQTEELAMGLEASGVKFLWVVRKPSD 557
Query: 605 RG 600
G
Sbjct: 558 SG 563
>gb|DR117403.1|DR117403 RTMG1_6_F06.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_F06_A029 5', mRNA sequence
Length = 896
Score = 88.6 bits (187), Expect(2) = 5e-030
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = -1 / -3
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + R +V WAPQ +VLAH +VG F THCGW S +E+IS GVP++ P FA+Q +N R
Sbjct: 597 ERTKDRALLVKWAPQVKVLAHTSVGLFVTHCGWNSTLESISMGVPVVGFPYFADQFLNCR 418
Query: 371 YVTHQWGIGYE 339
+ W +G +
Sbjct: 417 FAKEIWKVGLD 385
Score = 62.9 bits (131), Expect(2) = 5e-030
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = -1 / -3
Query: 770 DPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
D CL WLD + P SV+Y+S G++A + E+ A L G G PFLWVLR
Sbjct: 798 DGRCLQWLDMQQPASVIYISFGNLAVKSQEQLEQLALGLEGCGQPFLWVLR 646
>gb|CO364746.1|CO364746 RTK1_21_C04.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_21_C04_A029 5', mRNA sequence
Length = 842
Score = 84.5 bits (178), Expect(2) = 9e-030
Identities = 34/69 (49%), Positives = 45/69 (65%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + R V WAPQ +VLAH +VG F+TH GW S +E+IS GVP++ P FA+Q +N R
Sbjct: 197 ERTKDRALFVTWAPQVKVLAHTSVGLFFTHGGWNSTLESISMGVPVVGLPYFADQYLNCR 376
Query: 371 YVTHQWGIG 345
+ W IG
Sbjct: 377 FAKDVWEIG 403
Score = 66.1 bits (138), Expect(2) = 9e-030
Identities = 27/48 (56%), Positives = 32/48 (66%)
Frame = -1 / +2
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
CL WLD + P SV+YVS GSVA + ++ A L GSG PFLWVLR
Sbjct: 5 CLTWLDLQQPASVIYVSFGSVAVKSQEQLQQLALGLEGSGQPFLWVLR 148
>gb|DR385195.1|DR385195 RTHG1_7_E09.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_7_E09_A029 3', mRNA sequence
Length = 739
Score = 79.0 bits (166), Expect(2) = 1e-029
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = -1 / +2
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + R V WAPQ +VL+H +VG F TH GW S +EA+S GVP++ P A+Q +N R
Sbjct: 251 ERTKERALFVRWAPQSKVLSHVSVGLFLTHGGWNSTLEAMSMGVPVVGFPYSADQFLNCR 430
Query: 371 YVTHQWGIG 345
+ W IG
Sbjct: 431 FAKEVWKIG 457
Score = 71.2 bits (149), Expect(2) = 1e-029
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = -1 / +2
Query: 770 DPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
+ +CL WLD + PRSV+YVS GS+A E+ A L SG PFLWVLR ++G
Sbjct: 50 EDSCLTWLDMQKPRSVIYVSFGSIAMKSEQQLEQLALGLESSGQPFLWVLRLDIIKG 220
>gb|DR110554.1|DR110554 RTS1_11_C05.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_11_C05_A029 5', mRNA sequence
Length = 825
Score = 79.0 bits (166), Expect(2) = 2e-029
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = -1 / -3
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + R V WAPQ +VL+H +VG F TH GW S +EA+S GVP++ P A+Q +N R
Sbjct: 631 ERTKERALFVRWAPQSKVLSHVSVGLFLTHGGWNSTLEAMSMGVPVVGFPYSADQFLNCR 452
Query: 371 YVTHQWGIG 345
+ W IG
Sbjct: 451 FAKEVWKIG 425
Score = 70.3 bits (147), Expect(2) = 2e-029
Identities = 28/54 (51%), Positives = 34/54 (62%)
Frame = -1 / -3
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
CL WLD + PRSV+YVS GS+A E+ A L SG PFLWVLR ++G
Sbjct: 823 CLTWLDMQQPRSVIYVSFGSIAMKSEQQLEQLALGLESSGQPFLWVLRLDIIKG 662
>gb|DR094210.1|DR094210 STRR1_13_D08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_13_D08_A033 3', mRNA sequence
Length = 775
Score = 85.8 bits (181), Expect(2) = 2e-029
Identities = 34/71 (47%), Positives = 45/71 (63%)
Frame = -1 / +1
Query: 551 ETVRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNAR 372
E + R V WAPQ +VLAH AVG F THCGW S +E+IS GVP++ P F +Q ++ R
Sbjct: 238 ERTKDRALFVQWAPQLKVLAHAAVGLFITHCGWNSTLESISLGVPVVGLPYFGDQFLHCR 417
Query: 371 YVTHQWGIGYE 339
+ W IG +
Sbjct: 418 FAKDVWKIGLD 450
Score = 63.4 bits (132), Expect(2) = 2e-029
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = -1 / +1
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
CL WLD + P SV+Y+S GS+A + ++ A L G+G PFLWVLR
Sbjct: 46 CLTWLDMQQPASVIYISFGSIAVKSQEQLQQLAIGLEGTGQPFLWVLR 189
>gb|DR068609.1|DR068609 RTDK1_1_G05.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_1_G05_A029 5', mRNA sequence
Length = 728
Score = 90.4 bits (191), Expect(2) = 2e-029
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = -1 / -2
Query: 542 RHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYVT 363
+ RG +V W Q VL+HP++GGF++HCGW S +E+IS G+P+L P EQ VN +++
Sbjct: 493 KQRGVVVPWCSQLNVLSHPSIGGFFSHCGWNSTLESISFGLPILGFPLGGEQFVNCKFIV 314
Query: 362 HQWGIG 345
+W IG
Sbjct: 313 DEWKIG 296
Score = 58.8 bits (122), Expect(2) = 2e-029
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = -1 / -2
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRR 615
C WLD + P+SV+YVS GS+ V + EE A L S F+WVLRR
Sbjct: 700 CTQWLDDKTPKSVIYVSFGSLLPVSISQIEEIAMGLKASDYSFIWVLRR 554
>gb|DR068520.1|DR068520 RTDK1_1_G05.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_1_G05_A029 3', mRNA sequence
Length = 643
Score = 90.4 bits (191), Expect(2) = 2e-029
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = -1 / -3
Query: 542 RHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAEQIVNARYVT 363
+ RG +V W Q VL+HP++GGF++HCGW S +E+IS G+P+L P EQ VN +++
Sbjct: 218 KQRGVVVPWCSQLNVLSHPSIGGFFSHCGWNSTLESISFGLPILGFPLGGEQFVNCKFIV 39
Query: 362 HQWGIG 345
+W IG
Sbjct: 38 DEWKIG 21
Score = 58.8 bits (122), Expect(2) = 2e-029
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = -1 / -3
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRR 615
C WLD + P+SV+YVS GS+ V + EE A L S F+WVLRR
Sbjct: 425 CTQWLDDKTPKSVIYVSFGSLLPVSISQIEEIAMGLKASDYSFIWVLRR 279
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 368,241,094
Number of Sequences: 355925
Number of extensions: 5007264
Number of successful extensions: 47278
Number of sequences better than 1.0e-020: 211
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 11268787805
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)