TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478084.2.1
(1395 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR102338.1|DR102338 STRR1_80_H10.b1_A033 Stem Response R... 215 5e-080
gb|DR099947.1|DR099947 STRR1_60_F09.b1_A033 Stem Response R... 215 3e-076
gb|DR177768.1|DR177768 RTMNUT1_7_F07.b1_A029 Roots minus mi... 215 8e-075
gb|CF474611.1|CF474611 RTWW2_9_E10.g1_A021 Well-watered lob... 147 1e-067
gb|DR057577.1|DR057577 RTNIT1_6_D02.g1_A029 Roots minus nit... 147 5e-067
gb|BM493459.1|BM493459 NXLV_064_F10_F NXLV (Nsf Xylem Late ... 187 1e-066
gb|DR057489.1|DR057489 RTNIT1_6_D02.b1_A029 Roots minus nit... 215 1e-064
gb|BF220601.1|BF220601 NXCI_149_C10_F NXCI (Nsf Xylem Compr... 204 2e-064
gb|BE758619.1|BE758619 NXCI_069_B10_F NXCI (Nsf Xylem Compr... 203 8e-064
gb|DR099998.1|DR099998 STRR1_60_F09.g1_A033 Stem Response R... 210 1e-053
gb|DT632775.1|DT632775 EST1147706 Normalized pine embryo li... 100 4e-053
gb|BM133887.1|BM133887 NXLV_013_F09_F NXLV (Nsf Xylem Late ... 204 9e-052
gb|BQ654555.1|BQ654555 NXRV082_B12_F NXRV (Nsf Xylem Root w... 108 3e-044
gb|BG317934.1|BG317934 NXPV_007_E07_F NXPV (Nsf Xylem Plani... 100 8e-043
gb|DR684952.1|DR684952 EST1075029 Normalized pine embryo li... 100 6e-040
gb|BG485763.1|BG485763 NXPV_038_E07_F NXPV (Nsf Xylem Plani... 100 6e-040
gb|CF386800.1|CF386800 RTDR1_16_C10.g1_A015 Loblolly pine r... 70 3e-033
gb|BG318662.1|BG318662 NXPV_017_E08_F NXPV (Nsf Xylem Plani... 103 3e-032
gb|DR177849.1|DR177849 RTMNUT1_7_F07.g1_A029 Roots minus mi... 100 3e-031
gb|DN463637.1|DN463637 EST959436 Sequencing ESTs from loblo... 60 1e-028
gb|BE643783.1|BE643783 NXCI_047_B11_F NXCI (Nsf Xylem Compr... 90 1e-027
gb|BF220984.1|BF220984 NXCI_153_E01_F NXCI (Nsf Xylem Compr... 87 7e-027
gb|DR053727.1|DR053727 RTCA1_13_A01.b1_A029 Roots minus cal... 60 2e-026
gb|BE451951.1|BE451951 NXCI_006_F12_F NXCI (Nsf Xylem Compr... 87 6e-026
gb|DR110735.1|DR110735 RTS1_12_D05.g1_A029 Roots minus sulf... 70 6e-026
gb|CF474499.1|CF474499 RTWW2_9_E10.b1_A021 Well-watered lob... 111 1e-023
gb|AL751112.1|AL751112 AL751112 RS Pinus pinaster cDNA clon... 70 3e-022
gb|CO175985.1|CO175985 NDL1_58_D07.g1_A029 Needles control ... 75 9e-022
gb|DR167239.1|DR167239 RTPHOS1_17_C07.g1_A029 Roots minus p... 64 6e-021
>gb|DR102338.1|DR102338 STRR1_80_H10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_80_H10_A033 3', mRNA sequence
Length = 825
Score = 215 bits (465), Expect(2) = 5e-080
Identities = 85/109 (77%), Positives = 96/109 (88%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMDD Y RSALDYLELQPDL+ALVRGAHTFRCPN+G+TSW RLPIHDADFGWGR
Sbjct: 395 IHEALGRMDDEYLRSALDYLELQPDLTALVRGAHTFRCPNIGITSWSRLPIHDADFGWGR 574
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF* 277
P+FMGPGGIAYEGLAFVLPS+ DGSLSVA+ LQ +HM +F K++Y+ *
Sbjct: 575 PIFMGPGGIAYEGLAFVLPSSVNDGSLSVALGLQPDHMVRFAKMLYEI* 721
Score = 103 bits (220), Expect(2) = 5e-080
Identities = 42/80 (52%), Positives = 55/80 (68%)
Frame = -3 / +2
Query: 907 AVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCAT 728
+VAIFKL++ +L L+ + +S+Y +L+ H+WRCA AR L DQ TKLY AT
Sbjct: 89 SVAIFKLTKEQLEILKGKARENGNNIAYSSYEMLSGHIWRCACKARNLAEDQETKLYIAT 268
Query: 727 DGRQRLQPPLPEGYFGNVIF 668
DGR RL+P +P GYFGNVIF
Sbjct: 269 DGRNRLRPSIPPGYFGNVIF 328
>gb|DR099947.1|DR099947 STRR1_60_F09.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_60_F09_A033 3', mRNA sequence
Length = 672
Score = 215 bits (465), Expect(2) = 3e-076
Identities = 85/109 (77%), Positives = 96/109 (88%)
Frame = -1 / -1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMDD Y RSALDYLELQPDL+ALVRGAHTFRCPN+G+TSW RLPIHDADFGWGR
Sbjct: 399 IHEALGRMDDEYLRSALDYLELQPDLTALVRGAHTFRCPNIGITSWSRLPIHDADFGWGR 220
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF* 277
P+FMGPGGIAYEGLAFVLPS+ DGSLSVA+ LQ +HM +F K++Y+ *
Sbjct: 219 PIFMGPGGIAYEGLAFVLPSSVNDGSLSVALGLQPDHMVRFAKMLYEI* 73
Score = 91.3 bits (193), Expect(2) = 3e-076
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = -3 / -1
Query: 826 FSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
+S+Y +L+ H+WRCA AR L DQ TKLY ATDGR RL+P +P GYFGNVIF
Sbjct: 624 YSSYEMLSGHIWRCACKARNLAEDQETKLYIATDGRNRLRPSIPPGYFGNVIF 466
>gb|DR177768.1|DR177768 RTMNUT1_7_F07.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_7_F07_A029 3', mRNA sequence
Length = 721
Score = 215 bits (465), Expect(2) = 8e-075
Identities = 85/109 (77%), Positives = 96/109 (88%)
Frame = -1 / +3
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMDD Y RSALDYLELQPDL+ALVRGAHTFRCPN+G+TSW RLPIHDADFGWGR
Sbjct: 354 IHEALGRMDDEYLRSALDYLELQPDLTALVRGAHTFRCPNIGITSWSRLPIHDADFGWGR 533
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF* 277
P+FMGPGGIAYEGLAFVLPS+ DGSLSVA+ LQ +HM +F K++Y+ *
Sbjct: 534 PIFMGPGGIAYEGLAFVLPSSVNDGSLSVALGLQPDHMVRFAKMLYEI* 680
Score = 86.3 bits (182), Expect(2) = 8e-075
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = -3 / +2
Query: 907 AVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCAT 728
+VAIFKL++ +L L+ + +S+Y +L+ H+WRCA AR L DQ TKLY AT
Sbjct: 47 SVAIFKLTKEQLEILKGKARENGNNIAYSSYEMLSGHIWRCACKARNLAEDQETKLYIAT 226
Query: 727 DGRQRLQPPLPEGYFGNVIFH 665
DGR RL+P +P F F+
Sbjct: 227 DGRNRLRPSIPPWLFWECYFY 289
>gb|CF474611.1|CF474611 RTWW2_9_E10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_9_E10_A021 5', mRNA sequence
Length = 644
Score = 147 bits (315), Expect(3) = 1e-067
Identities = 56/66 (84%), Positives = 60/66 (90%)
Frame = -1 / +3
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMDD Y RSALDYLELQPDL+ALVRGAHTFRCPN+G+TSW RLPIHDADFGWGR
Sbjct: 447 IHEALGRMDDEYLRSALDYLELQPDLTALVRGAHTFRCPNIGITSWSRLPIHDADFGWGR 626
Query: 423 PVFMGP 406
P+FMGP
Sbjct: 627 PIFMGP 644
Score = 103 bits (220), Expect(3) = 1e-067
Identities = 42/80 (52%), Positives = 55/80 (68%)
Frame = -3 / +3
Query: 907 AVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCAT 728
+VAIFKL++ +L L+ + +S+Y +L+ H+WRCA AR L DQ TKLY AT
Sbjct: 141 SVAIFKLTKEQLEILKGKARENGNNIAYSSYEMLSGHIWRCACKARNLAEDQETKLYIAT 320
Query: 727 DGRQRLQPPLPEGYFGNVIF 668
DGR RL+P +P GYFGNVIF
Sbjct: 321 DGRNRLRPSIPPGYFGNVIF 380
Score = 46.4 bits (95), Expect(3) = 1e-067
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -3 / +3
Query: 1048 PFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
PFIDR+ LRAR+ PTP + HI+YQ P +
Sbjct: 12 PFIDRTRLRARNAPTPKFQHIKYQQPPPL 98
>gb|DR057577.1|DR057577 RTNIT1_6_D02.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_6_D02_A029 5', mRNA sequence
Length = 624
Score = 147 bits (315), Expect(3) = 5e-067
Identities = 56/66 (84%), Positives = 60/66 (90%)
Frame = -1 / +3
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMDD Y RSALDYLELQPDL+ALVRGAHTFRCPN+G+TSW RLPIHDADFGWGR
Sbjct: 426 IHEALGRMDDEYLRSALDYLELQPDLTALVRGAHTFRCPNIGITSWSRLPIHDADFGWGR 605
Query: 423 PVFMGP 406
P+FMGP
Sbjct: 606 PIFMGP 623
Score = 103 bits (220), Expect(3) = 5e-067
Identities = 42/80 (52%), Positives = 55/80 (68%)
Frame = -3 / +3
Query: 907 AVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCAT 728
+VAIFKL++ +L L+ + +S+Y +L+ H+WRCA AR L DQ TKLY AT
Sbjct: 120 SVAIFKLTKEQLEILKGKARENGNNIAYSSYEMLSGHIWRCACKARNLAEDQETKLYIAT 299
Query: 727 DGRQRLQPPLPEGYFGNVIF 668
DGR RL+P +P GYFGNVIF
Sbjct: 300 DGRNRLRPSIPPGYFGNVIF 359
Score = 44.1 bits (90), Expect(3) = 5e-067
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3 / +3
Query: 1036 RSLLRARDPPTPGYPHIEYQPAPAM 962
R+LLRAR+PPTP + HIEYQ P +
Sbjct: 3 RTLLRARNPPTPKFQHIEYQQPPPL 77
>gb|BM493459.1|BM493459 NXLV_064_F10_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_064_F10 5' similar to Arabidopsis thaliana
sequence At5g48930 anthranilate N-benzoyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 629
Score = 187 bits (402), Expect(2) = 1e-066
Identities = 75/101 (74%), Positives = 81/101 (80%)
Frame = -1 / +3
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMDD Y RSALDYLELQPDL+ALVRGAHTFRCPN+G+TSW RLPIHDADFGWGR
Sbjct: 234 IHEALGRMDDEYLRSALDYLELQPDLTALVRGAHTFRCPNIGITSWSRLPIHDADFGWGR 413
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKF 301
P+FMGPGGIAYEGLAFVLPS+ DGS I + F
Sbjct: 414 PIFMGPGGIAYEGLAFVLPSSVNDGSXVSCIGIATRSYGSF 536
Score = 87.7 bits (185), Expect(2) = 1e-066
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -3 / +3
Query: 817 YAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
Y +L+ H+WRCA AR L DQ TKLY ATDGR RL+P +P GYFGNVIF
Sbjct: 18 YEMLSGHIWRCACKARNLAEDQETKLYIATDGRNRLRPSIPPGYFGNVIF 167
>gb|DR057489.1|DR057489 RTNIT1_6_D02.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_6_D02_A029 3', mRNA sequence
Length = 837
Score = 215 bits (465), Expect(3) = 1e-064
Identities = 85/109 (77%), Positives = 96/109 (88%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMDD Y RSALDYLELQPDL+ALVRGAHTFRCPN+G+TSW RLPIHDADFGWGR
Sbjct: 169 IHEALGRMDDEYLRSALDYLELQPDLTALVRGAHTFRCPNIGITSWSRLPIHDADFGWGR 348
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF* 277
P+FMGPGGIAYEGLAFVLPS+ DGSLSVA+ LQ +HM +F K++Y+ *
Sbjct: 349 PIFMGPGGIAYEGLAFVLPSSVNDGSLSVALGLQPDHMVRFAKMLYEI* 495
Score = 41.8 bits (85), Expect(3) = 1e-064
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3 / +3
Query: 766 LPADQPTKLYCATDGRQRLQPPLPEGYF 683
L DQ TKLY ATDGR RL+P +P F
Sbjct: 3 LAEDQETKLYIATDGRNRLRPSIPPWLF 86
Score = 29.5 bits (58), Expect(3) = 1e-064
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 703 PLPEGYFGNVIF 668
P P GYFGNVIF
Sbjct: 67 PFPPGYFGNVIF 102
>gb|BF220601.1|BF220601 NXCI_149_C10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_149_C10 5' similar to Arabidopsis
thaliana sequence At5g48930 anthranilate
N-benzoyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 520
Score = 204 bits (440), Expect(2) = 2e-064
Identities = 81/107 (75%), Positives = 91/107 (85%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMDD Y RSALDYLELQPDL+ALVRGAHTFRCPN+G+TSW RLPIHDADFGWGR
Sbjct: 172 IHEALGRMDDEYLRSALDYLELQPDLTALVRGAHTFRCPNIGITSWSRLPIHDADFGWGR 351
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYD 283
P+FMGPGGIAYE AFVLPS+ DGSLSVA+ LQ M +F K++Y+
Sbjct: 352 PIFMGPGGIAYEXXAFVLPSSVNDGSLSVALGLQPXXMVRFAKMLYE 492
Score = 63.4 bits (132), Expect(2) = 2e-064
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3 / +1
Query: 772 RGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
R L DQ TKLY ATDGR RL+P +P GYFGNVIF
Sbjct: 1 RNLAEDQETKLYIATDGRNRLRPSIPPGYFGNVIF 105
>gb|BE758619.1|BE758619 NXCI_069_B10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_069_B10 5' similar to Arabidopsis
thaliana sequence At5g48930 anthranilate
N-benzoyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 508
Score = 203 bits (437), Expect(2) = 8e-064
Identities = 81/106 (76%), Positives = 90/106 (84%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMDD Y RSALDYLELQPDL+ALVRGAHTFRCPN+G+TSW RLPIHDADFGWGR
Sbjct: 172 IHEALGRMDDEYLRSALDYLELQPDLTALVRGAHTFRCPNIGITSWSRLPIHDADFGWGR 351
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIY 286
P+FMGPG IAYEGLAFVL S+ DGSLSVA+ L +HM +F K+ Y
Sbjct: 352 PIFMGPGXIAYEGLAFVLXSSVNDGSLSVALGLXPDHMVRFXKMXY 489
Score = 62.5 bits (130), Expect(2) = 8e-064
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = -3 / +1
Query: 772 RGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
R L DQ TKLY ATDGR RL P +P GYFGNVIF
Sbjct: 1 RNLAEDQETKLYIATDGRNRLXPSIPPGYFGNVIF 105
>gb|DR099998.1|DR099998 STRR1_60_F09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_60_F09_A033 5', mRNA sequence
Length = 455
Score = 210 bits (454), Expect = 1e-053
Identities = 83/109 (76%), Positives = 94/109 (86%)
Frame = -1 / -2
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMDD Y SALDYLELQPDL+ALVRGAHTFRCPN+G+ SW RLPIHDADFGWGR
Sbjct: 370 IHEALGRMDDEYLGSALDYLELQPDLTALVRGAHTFRCPNIGIASWFRLPIHDADFGWGR 191
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF* 277
P+FMGPGGIAYEGLAFVLPS+ DGSLSVA+ LQ +HM +F K++Y+ *
Sbjct: 190 PIFMGPGGIAYEGLAFVLPSSVNDGSLSVALGLQPDHMVRFAKMLYEI* 44
>gb|DT632775.1|DT632775 EST1147706 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFN61 3' end, mRNA sequence
Length = 775
Score = 100 bits (212), Expect(3) = 4e-053
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = -3 / +2
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
QHHVA G++G+HFIN+W+D+ RG+ I PFIDR+LLRAR+PPTP + HIEYQ P +
Sbjct: 335 QHHVADGYAGIHFINTWSDVARGLDITLPPFIDRTLLRARNPPTPKFQHIEYQQPPPL 508
Score = 91.8 bits (194), Expect(3) = 4e-053
Identities = 37/75 (49%), Positives = 50/75 (66%)
Frame = -3 / +2
Query: 907 AVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCAT 728
+VAIFKL++ +L L+ + +S+Y +L+ H+WRCA AR L DQ TKLY AT
Sbjct: 551 SVAIFKLTKEQLEILKGKARENGNNIAYSSYEMLSGHIWRCACKARNLAEDQETKLYIAT 730
Query: 727 DGRQRLQPPLPEGYF 683
DGR RL+P +P GYF
Sbjct: 731 DGRNRLRPSIPPGYF 775
Score = 56.5 bits (117), Expect(3) = 4e-053
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = -2 / +2
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P +L++LIP V++++DISS+PLLVLQVT FK G G GM
Sbjct: 209 PTMELKQLIPKVNYSEDISSYPLLVLQVTFFKCGGVSLGVGM 334
>gb|BM133887.1|BM133887 NXLV_013_F09_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_013_F09 5' similar to Arabidopsis thaliana
sequence At5g48930 anthranilate N-benzoyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 442
Score = 204 bits (441), Expect = 9e-052
Identities = 82/109 (75%), Positives = 92/109 (84%)
Frame = -1 / +3
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGR 424
I AL RMDD Y RSA YLELQPDL+ALVRGAHTFRCPN+G+TSW RLPIHDADFGWGR
Sbjct: 51 IHEALGRMDDEYLRSAXXYLELQPDLTALVRGAHTFRCPNIGITSWSRLPIHDADFGWGR 230
Query: 423 PVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF* 277
P+FMGPGGIAYEGLAFVLPS+ DGSLSVA+ LQ M +F K++Y+ *
Sbjct: 231 PIFMGPGGIAYEGLAFVLPSSVNDGSLSVALGLQPXXMVRFAKMLYEI* 377
>gb|BQ654555.1|BQ654555 NXRV082_B12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV082_B12 5' similar to Arabidopsis thaliana
sequence At5g48930 anthranilate N-benzoyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 441
Score = 108 bits (231), Expect(2) = 3e-044
Identities = 43/52 (82%), Positives = 46/52 (88%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIH 448
I AL RMDD Y RSALDYLELQPDL+ALVRGAHTFRCPN+G+TSW RLPIH
Sbjct: 241 IHEALGRMDDEYLRSALDYLELQPDLTALVRGAHTFRCPNIGITSWSRLPIH 396
Score = 91.3 bits (193), Expect(2) = 3e-044
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = -3 / +1
Query: 826 FSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIF 668
+S+Y +L+ H+WRCA AR L DQ TKLY ATDGR RL+P +P GYFGNVIF
Sbjct: 16 YSSYEMLSGHIWRCACKARNLAEDQETKLYIATDGRNRLRPSIPPGYFGNVIF 174
>gb|BG317934.1|BG317934 NXPV_007_E07_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_007_E07 5' similar to Arabidopsis
thaliana sequence At5g48930 anthranilate
N-benzoyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 567
Score = 100 bits (212), Expect(3) = 8e-043
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = -3 / +1
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
QHHVA G++G+HFIN+W+D+ RG+ I PFIDR+LLRAR+PPTP + HIEYQ P +
Sbjct: 154 QHHVADGYAGIHFINTWSDVARGLDITLPPFIDRTLLRARNPPTPKFQHIEYQQPPPL 327
Score = 57.0 bits (118), Expect(3) = 8e-043
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = -3 / +1
Query: 907 AVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCAT 728
+VAIFKL++ +L L+ + +S+Y +L+ H+WRCA AR L KLY AT
Sbjct: 370 SVAIFKLTKEQLEILKGKARENGNNIAYSSYEMLSGHIWRCACKARNLAEXXXNKLYIAT 549
Query: 727 DGR 719
R
Sbjct: 550 XXR 558
Score = 56.5 bits (117), Expect(3) = 8e-043
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = -2 / +1
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P +L++LIP V++++DISS+PLLVLQVT FK G G GM
Sbjct: 28 PTMELKQLIPKVNYSEDISSYPLLVLQVTFFKCGGVSLGVGM 153
>gb|DR684952.1|DR684952 EST1075029 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAY47 3' end, mRNA sequence
Length = 686
Score = 100 bits (212), Expect(3) = 6e-040
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = -3 / +3
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
QHHVA G++G+HFIN+W+D+ RG+ I PFIDR+LLRAR+PPTP + HIEYQ P +
Sbjct: 327 QHHVADGYAGIHFINTWSDVARGLDITLPPFIDRTLLRARNPPTPKFQHIEYQQPPPL 500
Score = 56.5 bits (117), Expect(3) = 6e-040
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = -2 / +3
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P +L++LIP V++++DISS+PLLVLQVT FK G G GM
Sbjct: 201 PTMELKQLIPKVNYSEDISSYPLLVLQVTFFKCGGVSLGVGM 326
Score = 47.3 bits (97), Expect(3) = 6e-040
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = -3 / +3
Query: 907 AVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGL 764
+VAIFKL++ +L L+ + +S+Y +L+ H+WRCA AR L
Sbjct: 543 SVAIFKLTKEQLEILKGKARENGNNIAYSSYEMLSGHIWRCACKARNL 686
>gb|BG485763.1|BG485763 NXPV_038_E07_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_038_E07 5' similar to Arabidopsis
thaliana sequence At5g48930 anthranilate
N-benzoyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 553
Score = 100 bits (212), Expect(3) = 6e-040
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = -3 / +1
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
QHHVA G++G+HFIN+W+D+ RG+ I PFIDR+LLRAR+PPTP + HIEYQ P +
Sbjct: 154 QHHVADGYAGIHFINTWSDVARGLDITLPPFIDRTLLRARNPPTPKFQHIEYQQPPPL 327
Score = 56.5 bits (117), Expect(3) = 6e-040
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = -2 / +1
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P +L++LIP V++++DISS+PLLVLQVT FK G G GM
Sbjct: 28 PTMELKQLIPKVNYSEDISSYPLLVLQVTFFKCGGVSLGVGM 153
Score = 47.3 bits (97), Expect(3) = 6e-040
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = -3 / +1
Query: 907 AVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGL 764
+VAIFKL++ +L L+ + +S+Y +L+ H+WRCA AR L
Sbjct: 370 SVAIFKLTKEQLEILKGKARENGNNIAYSSYEMLSGHIWRCACKARNL 513
>gb|CF386800.1|CF386800 RTDR1_16_C10.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_16_C10_A015 5', mRNA
sequence
Length = 812
Score = 69.8 bits (146), Expect(4) = 3e-033
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = -3 / +1
Query: 1132 HHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLSE 953
H + G + F+NSWA+ RGVP++ PF+DRSLL+AR PP PH+E+ + S+
Sbjct: 40 HCMFDGIGAMEFVNSWAETARGVPLSVPPFMDRSLLKARSPPKIECPHLEFSEIKEVSSD 219
Score = 59.7 bits (124), Expect(4) = 3e-033
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = -3 / +1
Query: 895 FKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQ 716
F + +L L+ Q + ST+ L+A VW+ A + +Q KL A DGR
Sbjct: 262 FCFTPEKLDELKKQAMEDGVLTKCSTFEALSALVWKYRCNALNMAPNQEAKLLFAVDGRA 441
Query: 715 RLQPPLPEGYFGNVI 671
+ +PPLP+GYFGN I
Sbjct: 442 KFEPPLPKGYFGNGI 486
Score = 42.3 bits (86), Expect(4) = 3e-033
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1 / +1
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISL 325
LT+W RL H DFGWG PV P + + L + S+++ + L
Sbjct: 658 LTTWSRLSFHTTDFGWGEPVQSVPVTLPAREVVLFLSHGQQRKSINILLGL 810
Score = 26.7 bits (52), Expect(4) = 3e-033
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLEL 538
IQ A+ + D + RSA+DY E+
Sbjct: 556 IQKAIGMITDKFMRSAIDYFEV 621
>gb|BG318662.1|BG318662 NXPV_017_E08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_017_E08 5' similar to Arabidopsis
thaliana sequence At5g48930 anthranilate
N-benzoyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 484
Score = 103 bits (220), Expect(2) = 3e-032
Identities = 42/80 (52%), Positives = 55/80 (68%)
Frame = -3 / +2
Query: 907 AVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCAT 728
+VAIFKL++ +L L+ + +S+Y +L+ H+WRCA AR L DQ TKLY AT
Sbjct: 47 SVAIFKLTKEQLEILKGKARENGNNIAYSSYEMLSGHIWRCACKARNLAEDQETKLYIAT 226
Query: 727 DGRQRLQPPLPEGYFGNVIF 668
DGR RL+P +P GYFGNVIF
Sbjct: 227 DGRNRLRPSIPPGYFGNVIF 286
Score = 56.1 bits (116), Expect(2) = 3e-032
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLT 472
I AL MDD Y RSA DYL LQPDL+A V HT N+G+T
Sbjct: 353 IHEALGWMDDEYLRSAXDYLXLQPDLTAXVXXXHTXXXXNIGIT 484
>gb|DR177849.1|DR177849 RTMNUT1_7_F07.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_7_F07_A029 5', mRNA sequence
Length = 810
Score = 100 bits (212), Expect(2) = 3e-031
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = -3 / +2
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
QHHVA G++G+HFIN+W+D+ RG+ I PFIDR+LLRAR+PPTP + HIEYQ P +
Sbjct: 503 QHHVADGYAGIHFINTWSDVARGLDITLPPFIDRTLLRARNPPTPKFQHIEYQQPPPL 676
Score = 56.5 bits (117), Expect(2) = 3e-031
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = -2 / +2
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P +L++LIP V++++DISS+PLLVLQVT FK G G GM
Sbjct: 377 PTMELKQLIPKVNYSEDISSYPLLVLQVTFFKCGGVSLGVGM 502
>gb|DN463637.1|DN463637 EST959436 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJ135 5' end, mRNA sequence
Length = 854
Score = 59.7 bits (124), Expect(4) = 1e-028
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = -3 / +1
Query: 895 FKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQ 716
F + +L L+ Q + ST+ L+A VW+ A + +Q KL A DGR
Sbjct: 172 FCFTPEKLDELKKQAMEDGVLTKCSTFEALSALVWKYRCNALNMAPNQEAKLLFAVDGRA 351
Query: 715 RLQPPLPEGYFGNVI 671
+ +PPLP+GYFGN I
Sbjct: 352 KFEPPLPKGYFGNGI 396
Score = 49.2 bits (101), Expect(4) = 1e-028
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = -3 / +1
Query: 1081 DLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLSE 953
+ RGVP++ PF+DRSLL+AR PP PH+E+ + S+
Sbjct: 1 ETARGVPLSVPPFMDRSLLKARSPPKIECPHLEFSEIKEVSSD 129
Score = 47.3 bits (97), Expect(4) = 1e-028
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -1 / +1
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKF 301
LT+W RL H DFGWG PV P + + L + S+++ + L M++F
Sbjct: 568 LTTWSRLSFHTTDFGWGEPVQSVPVTLPAREVVLFLSHGQQRKSINILLGLPESAMDRF 744
Score = 26.7 bits (52), Expect(4) = 1e-028
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1 / +1
Query: 603 IQAALDRMDDGYCRSALDYLEL 538
IQ A+ + D + RSA+DY E+
Sbjct: 466 IQKAIGMITDKFMRSAIDYFEV 531
>gb|BE643783.1|BE643783 NXCI_047_B11_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_047_B11 5' similar to Arabidopsis
thaliana sequence At5g48930 anthranilate
N-benzoyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 395
Score = 90.0 bits (190), Expect(2) = 1e-027
Identities = 38/80 (47%), Positives = 50/80 (62%)
Frame = -3 / +1
Query: 907 AVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCAT 728
+VAIFKL++ +L L+ + +S+Y +L+ H+WRCA AR L DQ TKLY AT
Sbjct: 142 SVAIFKLTKEQLEILKGKARENGNNIAYSSYEMLSXHIWRCACKARNLAEDQETKLYIAT 321
Query: 727 DGRQRLQPPLPEGYFGNVIF 668
RL P +P YFGNVIF
Sbjct: 322 XXXNRLXPXIPPXYFGNVIF 381
Score = 54.7 bits (113), Expect(2) = 1e-027
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -3 / +1
Query: 1048 PFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
PFIDR+LLRAR+PPTP + HIEYQ P +
Sbjct: 13 PFIDRTLLRARNPPTPKFQHIEYQQPPPL 99
>gb|BF220984.1|BF220984 NXCI_153_E01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_153_E01 5' similar to Arabidopsis
thaliana sequence At5g48930 anthranilate
N-benzoyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 395
Score = 87.2 bits (184), Expect(2) = 7e-027
Identities = 37/80 (46%), Positives = 49/80 (61%)
Frame = -3 / +1
Query: 907 AVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCAT 728
+VAIFKL++ +L L+ + +S+Y +L+ H+WRCA AR L TKLY AT
Sbjct: 142 SVAIFKLTKEQLEILKGKARENGNNIAYSSYEMLSGHIWRCAXXARNLAEXXETKLYIAT 321
Query: 727 DGRQRLQPPLPEGYFGNVIF 668
R RL +P GYFGNVIF
Sbjct: 322 XXRNRLXXSIPPGYFGNVIF 381
Score = 54.7 bits (113), Expect(2) = 7e-027
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -3 / +1
Query: 1048 PFIDRSLLRARDPPTPGYPHIEYQPAPAM 962
PFIDR+LLRAR+PPTP + HIEYQ P +
Sbjct: 13 PFIDRTLLRARNPPTPKFQHIEYQQPPPL 99
>gb|DR053727.1|DR053727 RTCA1_13_A01.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_13_A01_A029 3', mRNA sequence
Length = 860
Score = 59.7 bits (124), Expect(4) = 2e-026
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = -3 / -2
Query: 895 FKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQ 716
F + +L L+ Q + ST+ L+A VW+ A + +Q KL A DGR
Sbjct: 709 FCFTPEKLDELKKQAMEDGVLTKCSTFEALSALVWKYRCNALNMAPNQEAKLLFAVDGRA 530
Query: 715 RLQPPLPEGYFGNVI 671
+ +PPLP+GYFGN I
Sbjct: 529 KFEPPLPKGYFGNGI 485
Score = 47.3 bits (97), Expect(4) = 2e-026
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -1 / -2
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKF 301
LT+W RL H DFGWG PV P + + L + S+++ + L M++F
Sbjct: 313 LTTWSRLSFHTTDFGWGEPVQSVPVTLPAREVVLFLSHGQQRKSINILLGLPESAMDRF 137
Score = 41.4 bits (84), Expect(4) = 2e-026
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -3 / -2
Query: 1054 GMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLSE 953
G PF+DRSLL+AR PP PH+E+ + S+
Sbjct: 853 GPPFMDRSLLKARSPPKIECPHLEFSEIKEVSSD 752
Score = 26.7 bits (52), Expect(4) = 2e-026
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1 / -2
Query: 603 IQAALDRMDDGYCRSALDYLEL 538
IQ A+ + D + RSA+DY E+
Sbjct: 415 IQKAIGMITDKFMRSAIDYFEV 350
>gb|BE451951.1|BE451951 NXCI_006_F12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_006_F12 5' similar to Arabidopsis
thaliana sequence At5g48930 anthranilate
N-benzoyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 474
Score = 87.2 bits (184), Expect(2) = 6e-026
Identities = 31/53 (58%), Positives = 41/53 (77%)
Frame = -3 / +2
Query: 1135 QHHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQ 977
QHHVA G++G+HFIN+W+D+ RG+ I PFIDR+L +PPTP + HIEYQ
Sbjct: 257 QHHVADGYAGIHFINTWSDVARGLXITLPPFIDRTLXXXXNPPTPKFQHIEYQ 415
Score = 51.5 bits (106), Expect(2) = 6e-026
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = -2 / +2
Query: 1262 PPGDLERLIPTVDFTDDISSFPLLVLQVTHFKWGFFFFGEGM 1137
P +L++LIP V++++DISS+PLLVL T FK G G GM
Sbjct: 131 PTMELKQLIPKVNYSEDISSYPLLVLXXTFFKCGGVSLGVGM 256
>gb|DR110735.1|DR110735 RTS1_12_D05.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_12_D05_A029 5', mRNA sequence
Length = 803
Score = 69.8 bits (146), Expect(3) = 6e-026
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = -3 / +2
Query: 1132 HHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLSE 953
H + G + F+NSWA+ RGVP++ PF+DRSLL+AR PP PH+E+ + S+
Sbjct: 161 HCMFDGIGAMEFVNSWAETARGVPLSVPPFMDRSLLKARSPPKIECPHLEFSEIKEVSSD 340
Score = 59.7 bits (124), Expect(3) = 6e-026
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = -3 / +2
Query: 895 FKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQ 716
F + +L L+ Q + ST+ L+A VW+ A + +Q KL A DGR
Sbjct: 383 FCFTPEKLDELKKQAMEDGVLTKCSTFEALSALVWKYRCNALNMAPNQEAKLLFAVDGRA 562
Query: 715 RLQPPLPEGYFGNVI 671
+ +PPLP+GYFGN I
Sbjct: 563 KFEPPLPKGYFGNGI 607
Score = 26.7 bits (52), Expect(3) = 6e-026
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1 / +2
Query: 603 IQAALDRMDDGYCRSALDYLEL 538
IQ A+ + D + RSA+DY E+
Sbjct: 677 IQKAIGMITDKFMRSAIDYFEV 742
>gb|CF474499.1|CF474499 RTWW2_9_E10.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_9_E10_A021 3', mRNA sequence
Length = 369
Score = 111 bits (237), Expect = 1e-023
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = -1 / +1
Query: 453 IHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF* 277
IHDADFGWGRP+FMG GGIAYEGLAFVLPS+ DGSLSVA+ LQ +HM +F K++Y+ *
Sbjct: 1 IHDADFGWGRPIFMGRGGIAYEGLAFVLPSSVNDGSLSVALGLQPDHMVRFAKMLYEI* 177
>gb|AL751112.1|AL751112 AL751112 RS Pinus pinaster cDNA clone RS05C02 similar to
N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, mRNA sequence
Length = 656
Score = 69.8 bits (146), Expect(2) = 3e-022
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = -3 / +2
Query: 1132 HHVAGGFSGLHFINSWADLCRGVPIAGMPFIDRSLLRARDPPTPGYPHIEYQPAPAMLSE 953
H + G + F+NSWA+ RGVP++ PF+DRSLL+AR PP PH+E+ + S+
Sbjct: 227 HCMFDGIGAMEFVNSWAETARGVPLSVPPFMDRSLLKARSPPKIECPHLEFSEIKEVSSD 406
Score = 56.5 bits (117), Expect(2) = 3e-022
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = -3 / +2
Query: 895 FKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQ 716
F + +L L+ Q R ST+ L+A VW+C S A + +Q KL A DGR
Sbjct: 449 FCFTPEKLDELKKQAMEDGVLTRCSTFEALSALVWKCRSNALNMAPNQEAKLLFAVDGRA 628
Query: 715 RLQPPLPEG 689
+ +PPLP+G
Sbjct: 629 KFEPPLPKG 655
>gb|CO175985.1|CO175985 NDL1_58_D07.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_58_D07_A029 5', mRNA sequence
Length = 794
Score = 75.3 bits (158), Expect(3) = 9e-022
Identities = 33/70 (47%), Positives = 42/70 (60%)
Frame = -3 / -3
Query: 874 LVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLP 695
L RL+ Q R +T+ L+A VWRC S A + +Q TKL A DGR R +PPLP
Sbjct: 777 LDRLKKQATGDGILNRCTTFEALSAQVWRCRSKALEMAPNQETKLLFAVDGRNRFEPPLP 598
Query: 694 EGYFGNVIFH 665
+GYFGN I +
Sbjct: 597 KGYFGNGIVY 568
Score = 37.7 bits (76), Expect(3) = 9e-022
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = -1 / -3
Query: 483 LGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEK 304
L +T+W L H ADFG PV P + + L S++ +SL M++
Sbjct: 408 LVITTWTNLSFHTADFGLEEPVQTAPVTPPEKEVVLFLSHGKERRSINSLLSLPDRAMKR 229
Query: 303 FRKLIY 286
F I+
Sbjct: 228 FEDFIH 211
Score = 29.0 bits (57), Expect(3) = 9e-022
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1 / -3
Query: 603 IQAALDRMDDGYCRSALDYLEL 538
+Q A+ D Y RSA+DY+EL
Sbjct: 504 VQKAIAMTTDKYMRSAIDYIEL 439
>gb|DR167239.1|DR167239 RTPHOS1_17_C07.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_17_C07_A029 5', mRNA sequence
Length = 873
Score = 64.3 bits (134), Expect(2) = 6e-021
Identities = 24/65 (36%), Positives = 40/65 (61%)
Frame = -1 / +2
Query: 477 LTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFR 298
L++W ++P DFG+G+P++ GP A +L + DG L++ I+LQ ++KF
Sbjct: 512 LSAWWKIPFQLVDFGFGKPIYAGPIVNAMVEFVLLLSNGKHDGGLNIYIALQNHQLDKFE 691
Query: 297 KLIYD 283
+LIYD
Sbjct: 692 QLIYD 706
Score = 61.1 bits (127), Expect(2) = 6e-021
Identities = 25/83 (30%), Positives = 45/83 (54%)
Frame = -3 / +2
Query: 916 PPTAVAIFKLSRAELVRLRSQVPAREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLY 737
P + +F S + +L+ + + S++ +AA VW+ + A +P D P+K+
Sbjct: 95 PDYSYKVFPFSGEMVEKLKKKAMEDGTLTKCSSFDAIAALVWQARTKAVDMPPDVPSKML 274
Query: 736 CATDGRQRLQPPLPEGYFGNVIF 668
A D R ++ PPLP+G+ GN +F
Sbjct: 275 FAVDLRSKMDPPLPKGFAGNAVF 343
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 610,426,580
Number of Sequences: 355925
Number of extensions: 8209698
Number of successful extensions: 60799
Number of sequences better than 1.0e-020: 41
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 21814375950
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)