TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2477970.2.1
(699 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX250840.1|BX250840 BX250840 Pinus pinaster differenciat... 287 4e-077
gb|BX252801.1|BX252801 BX252801 Pinus pinaster differenciat... 287 4e-077
gb|BX253221.1|BX253221 BX253221 Pinus pinaster differenciat... 287 4e-077
gb|BX254836.1|BX254836 BX254836 Pinus pinaster differenciat... 287 4e-077
gb|BX678056.1|BX678056 BX678056 RN Pinus pinaster cDNA clon... 287 4e-077
gb|CR354616.1|CR354616 CR354616 Pinus pinaster differenciat... 287 4e-077
gb|AI812874.1|AI812874 22A2 Pine Lambda Zap Xylem library P... 287 6e-077
gb|BF517202.1|BF517202 NXSI_011_F02_F NXSI (Nsf Xylem Side ... 287 6e-077
gb|BQ635299.1|BQ635299 NXRV078_F03_F NXRV (Nsf Xylem Root w... 287 6e-077
gb|CF401855.1|CF401855 RTWW1_15_A11.g1_A015 Well-watered lo... 287 6e-077
gb|CF471476.1|CF471476 RTDS1_3_G11.g1_A015 Drought-stressed... 287 6e-077
gb|CO158459.1|CO158459 FLD1_7_C01.b1_A029 Root flooded Pinu... 287 6e-077
gb|CV035667.1|CV035667 RTNACL1_41_D02.g1_A029 Roots plus ad... 287 6e-077
gb|CV138649.1|CV138649 EST849858 Sequencing ESTs from loblo... 287 6e-077
gb|CV138662.1|CV138662 EST849871 Sequencing ESTs from loblo... 287 6e-077
gb|DN448285.1|DN448285 EST944084 Sequencing ESTs from loblo... 287 6e-077
gb|DN464985.1|DN464985 EST960784 Sequencing ESTs from loblo... 287 6e-077
gb|DR101071.1|DR101071 STRR1_70_H01.b1_A033 Stem Response R... 287 6e-077
gb|DR101144.1|DR101144 STRR1_70_H01.g1_A033 Stem Response R... 287 6e-077
gb|DR384514.1|DR384514 RTHG1_2_E12.g1_A029 Roots plus added... 287 6e-077
gb|DT626574.1|DT626574 EST1158498 Sequencing ESTs from lobl... 287 6e-077
gb|DT626597.1|DT626597 EST1158521 Sequencing ESTs from lobl... 287 6e-077
gb|CF471422.1|CF471422 RTDS1_3_G11.b1_A015 Drought-stressed... 286 1e-076
gb|BX255385.1|BX255385 BX255385 Pinus pinaster differenciat... 283 7e-076
gb|BX251945.1|BX251945 BX251945 Pinus pinaster differenciat... 281 3e-075
gb|BG275288.1|BG275288 NXSI_138_H06_F NXSI (Nsf Xylem Side ... 281 4e-075
gb|BQ702786.1|BQ702786 NXSI_132_F04_F NXSI (Nsf Xylem Side ... 281 5e-075
gb|CV035598.1|CV035598 RTNACL1_41_D02.b1_A029 Roots plus ad... 278 2e-074
gb|BE209227.1|BE209227 NXNV_147_F01_F Nsf Xylem Normal wood... 277 5e-074
gb|CV137416.1|CV137416 EST848625 Sequencing ESTs from loblo... 234 5e-074
gb|BG039756.1|BG039756 NXSI_103_F06_F NXSI (Nsf Xylem Side ... 276 1e-073
gb|CO163866.1|CO163866 FLD1_44_F10.b1_A029 Root flooded Pin... 276 1e-073
gb|BQ291205.1|BQ291205 NXRV057_C06_F NXRV (Nsf Xylem Root w... 275 2e-073
gb|BF186158.1|BF186158 NXCI_133_F07_F NXCI (Nsf Xylem Compr... 234 5e-072
gb|AA556393.1|AA556393 248 Loblolly pine C Pinus taeda cDNA... 269 2e-071
gb|BE496587.1|BE496587 NXCI_020_H11_F NXCI (Nsf Xylem Compr... 267 7e-071
gb|BF049818.1|BF049818 NXCI_111_B11_F NXCI (Nsf Xylem Compr... 267 7e-071
gb|CN783911.1|CN783911 EST782602 Sequencing ESTs from loblo... 264 6e-070
gb|AW042769.1|AW042769 ST25B09 Pine TriplEx shoot tip libra... 247 6e-069
gb|AL750653.1|AL750653 AL750653 RN Pinus pinaster cDNA clon... 259 1e-068
gb|CR392253.1|CR392253 CR392253 RN Pinus pinaster cDNA clon... 257 7e-068
gb|CR394312.1|CR394312 CR394312 RN Pinus pinaster cDNA clon... 255 3e-067
gb|BQ655565.1|BQ655565 NXRV096_C05_F NXRV (Nsf Xylem Root w... 252 2e-066
gb|AW011379.1|AW011379 ST20A12 Pine TriplEx shoot tip libra... 250 9e-066
gb|AW056662.1|AW056662 ST54C10 Pine TriplEx shoot tip libra... 249 2e-065
gb|AW587643.1|AW587643 ST60H05 Pine TriplEx shoot tip libra... 241 4e-063
gb|BF517851.1|BF517851 NXSI_029_A10_F NXSI (Nsf Xylem Side ... 204 4e-063
gb|BX682073.1|BX682073 BX682073 RS Pinus pinaster cDNA clon... 155 1e-060
gb|BE762148.1|BE762148 NXCI_082_C07_F NXCI (Nsf Xylem Compr... 231 4e-060
gb|BF517009.1|BF517009 NXSI_008_B05_F NXSI (Nsf Xylem Side ... 226 9e-059
gb|BF220837.1|BF220837 NXCI_154_D11_F NXCI (Nsf Xylem Compr... 221 6e-057
gb|BE458097.1|BE458097 NXCI_008_A04_F NXCI (Nsf Xylem Compr... 219 1e-056
gb|BE241263.1|BE241263 NXNV_183_E12_F Nsf Xylem Normal wood... 218 3e-056
gb|BF010969.1|BF010969 NXCI_096_E10_F NXCI (Nsf Xylem Compr... 218 4e-056
gb|BE496470.1|BE496470 NXCI_018_E04_F NXCI (Nsf Xylem Compr... 214 5e-055
gb|DR094246.1|DR094246 STRR1_13_H09.b1_A033 Stem Response R... 205 2e-052
gb|DR388545.1|DR388545 RTHG1_28_H11.g1_A029 Roots plus adde... 173 4e-052
gb|DR177433.1|DR177433 RTMNUT1_5_G05.b1_A029 Roots minus mi... 203 1e-051
gb|DR177525.1|DR177525 RTMNUT1_5_G05.g1_A029 Roots minus mi... 203 1e-051
gb|BF220800.1|BF220800 NXCI_151_H06_F NXCI (Nsf Xylem Compr... 201 5e-051
gb|BG039475.1|BG039475 NXSI_099_E02_F NXSI (Nsf Xylem Side ... 201 5e-051
gb|AW289962.1|AW289962 NXNV008G03F Nsf Xylem Normal wood Ve... 199 2e-050
gb|CD026624.1|CD026624 NXNV008G03 Nsf Xylem Normal wood Ver... 199 2e-050
gb|AW985265.1|AW985265 NXNV_135_B04_F Nsf Xylem Normal wood... 196 1e-049
gb|BX679630.1|BX679630 BX679630 RS Pinus pinaster cDNA clon... 196 1e-049
gb|BX678184.1|BX678184 BX678184 RN Pinus pinaster cDNA clon... 159 3e-049
gb|BF169840.1|BF169840 NXCI_113_H11_F NXCI (Nsf Xylem Compr... 191 4e-048
gb|BM367474.1|BM367474 NXLV_049_G03_F NXLV (Nsf Xylem Late ... 191 5e-048
gb|BX679588.1|BX679588 BX679588 RS Pinus pinaster cDNA clon... 177 1e-043
gb|BF010718.1|BF010718 NXCI_066_F08_F NXCI (Nsf Xylem Compr... 172 2e-042
gb|CO201147.1|CO201147 RTCNT2_4_A01.b1_A029 Root control 2 ... 170 1e-041
gb|BQ701532.1|BQ701532 NXSI_065_F12_F NXSI (Nsf Xylem Side ... 169 2e-041
gb|BE758681.1|BE758681 NXCI_062_B07_F NXCI (Nsf Xylem Compr... 156 1e-037
gb|BF049838.1|BF049838 NXCI_111_F04_F NXCI (Nsf Xylem Compr... 144 5e-034
gb|CD016408.1|CD016408 NXCI_043_D05_F NXCI (Nsf Xylem Compr... 139 1e-032
gb|BE656781.1|BE656781 NXCI_056_G11_F NXCI (Nsf Xylem Compr... 132 2e-030
gb|CD017062.1|CD017062 NXCI_087_C12_F NXCI (Nsf Xylem Compr... 132 3e-030
gb|BX253439.1|BX253439 BX253439 Pinus pinaster differenciat... 120 1e-026
gb|BQ700070.1|BQ700070 NXRV134_E08_F NXRV (Nsf Xylem Root w... 106 1e-022
>gb|BX250840.1|BX250840 BX250840 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP042A05 similar to 60S ribosomal protein
L27A, mRNA sequence
Length = 583
Score = 287 bits (622), Expect = 4e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 11 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 190
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LW++VP D A+A D AP IDVTQFGYFKVLGKG LP +PIV
Sbjct: 191 FHKLRNHYHCPIVNIDKLWALVPEDVKAKATPDSAPLIDVTQFGYFKVLGKGELPSQPIV 370
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 371 VKAKLISKLAEKKIK 415
Score = 194 bits (419), Expect = 4e-049
Identities = 86/135 (63%), Positives = 95/135 (70%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT S
Sbjct: 414 LIFFSASLEISLAFTTMGCEGSSPLPNTLKYPN*VTSIKGALSGVALALTSSGTRAHSLS 235
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 234 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 55
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 54 TCPLFFLFFFSLVVI 10
>gb|BX252801.1|BX252801 BX252801 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP070H09 similar to 60S ribosomal protein
L27A, mRNA sequence
Length = 622
Score = 287 bits (622), Expect = 4e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 11 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 190
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LW++VP D A+A D AP IDVTQFGYFKVLGKG LP +PIV
Sbjct: 191 FHKLRNHYHCPIVNIDKLWALVPEDVKAKATPDSAPLIDVTQFGYFKVLGKGELPSQPIV 370
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 371 VKAKLISKLAEKKIK 415
Score = 194 bits (419), Expect = 4e-049
Identities = 86/135 (63%), Positives = 95/135 (70%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT S
Sbjct: 414 LIFFSASLEISLAFTTMGCEGSSPLPNTLKYPN*VTSIKGALSGVALALTSSGTRAHSLS 235
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 234 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 55
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 54 TCPLFFLFFFSLVVI 10
>gb|BX253221.1|BX253221 BX253221 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP079H10 similar to 60S ribosomal protein
L27A, mRNA sequence
Length = 630
Score = 287 bits (622), Expect = 4e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 20 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 199
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LW++VP D A+A D AP IDVTQFGYFKVLGKG LP +PIV
Sbjct: 200 FHKLRNHYHCPIVNIDKLWALVPEDVKAKATPDSAPLIDVTQFGYFKVLGKGELPSQPIV 379
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 380 VKAKLISKLAEKKIK 424
Score = 194 bits (419), Expect = 4e-049
Identities = 86/135 (63%), Positives = 95/135 (70%)
Frame = -1 / -1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT S
Sbjct: 423 LIFFSASLEISLAFTTMGCEGSSPLPNTLKYPN*VTSIKGALSGVALALTSSGTRAHSLS 244
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 243 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 64
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 63 TCPLFFLFFFSLVVI 19
>gb|BX254836.1|BX254836 BX254836 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP105F04 similar to 60S ribosomal protein
L27A, mRNA sequence
Length = 669
Score = 287 bits (622), Expect = 4e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 20 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 199
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LW++VP D A+A D AP IDVTQFGYFKVLGKG LP +PIV
Sbjct: 200 FHKLRNHYHCPIVNIDKLWALVPEDVKAKATPDSAPLIDVTQFGYFKVLGKGELPSQPIV 379
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 380 VKAKLISKLAEKKIK 424
Score = 194 bits (419), Expect = 4e-049
Identities = 86/135 (63%), Positives = 95/135 (70%)
Frame = -1 / -1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT S
Sbjct: 423 LIFFSASLEISLAFTTMGCEGSSPLPNTLKYPN*VTSIKGALSGVALALTSSGTRAHSLS 244
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 243 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 64
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 63 TCPLFFLFFFSLVVI 19
>gb|BX678056.1|BX678056 BX678056 RN Pinus pinaster cDNA clone RN55G03, mRNA sequence
Length = 557
Score = 287 bits (622), Expect = 4e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 9 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 188
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LW++VP D A+A D AP IDVTQFGYFKVLGKG LP +PIV
Sbjct: 189 FHKLRNHYHCPIVNIDKLWALVPEDVKAKATPDSAPLIDVTQFGYFKVLGKGELPSQPIV 368
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 369 VKAKLISKLAEKKIK 413
Score = 194 bits (419), Expect = 4e-049
Identities = 86/135 (63%), Positives = 95/135 (70%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT S
Sbjct: 412 LIFFSASLEISLAFTTMGCEGSSPLPNTLKYPN*VTSIKGALSGVALALTSSGTRAHSLS 233
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 232 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 53
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 52 TCPLFFLFFFSLVVI 8
>gb|CR354616.1|CR354616 CR354616 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 124A04, mRNA sequence
Length = 631
Score = 287 bits (622), Expect = 4e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +1
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 22 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 201
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LW++VP D A+A D AP IDVTQFGYFKVLGKG LP +PIV
Sbjct: 202 FHKLRNHYHCPIVNIDKLWALVPEDVKAKATPDSAPLIDVTQFGYFKVLGKGELPSQPIV 381
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 382 VKAKLISKLAEKKIK 426
Score = 194 bits (419), Expect = 4e-049
Identities = 86/135 (63%), Positives = 95/135 (70%)
Frame = -1 / -3
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT S
Sbjct: 425 LIFFSASLEISLAFTTMGCEGSSPLPNTLKYPN*VTSIKGALSGVALALTSSGTRAHSLS 246
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 245 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 66
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 65 TCPLFFLFFFSLVVI 21
>gb|AI812874.1|AI812874 22A2 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 447
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +1
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 31 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 210
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 211 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 390
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 391 VKAKLISKLAEKKIK 435
Score = 199 bits (428), Expect = 2e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 434 LIFFSASLEISLAFTTMGCDGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 255
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 254 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 75
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 74 TCPLFFLFFFSLVVI 30
>gb|BF517202.1|BF517202 NXSI_011_F02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_011_F02 5' similar to Arabidopsis thaliana
sequence At1g70600 60S ribosomal protein L27A see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 494
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +1
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 10 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 189
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 190 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 369
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 370 VKAKLISKLAEKKIK 414
Score = 198 bits (427), Expect = 3e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / -1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 413 LIFFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 234
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 233 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 54
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 53 TCPLFFLFFFSLVVI 9
>gb|BQ635299.1|BQ635299 NXRV078_F03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV078_F03 5' similar to Arabidopsis thaliana
sequence At1g70600 60S ribosomal protein L27A see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 558
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 36 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 215
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 216 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 395
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 396 VKAKLISKLAEKKIK 440
Score = 198 bits (427), Expect = 3e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / -3
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 439 LIFFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 260
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 259 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 80
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 79 TCPLFFLFFFSLVVI 35
>gb|CF401855.1|CF401855 RTWW1_15_A11.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_15_A11_A015 5', mRNA sequence
Length = 697
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 140 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 319
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 320 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 499
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 500 VKAKLISKLAEKKIK 544
Score = 198 bits (427), Expect = 3e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 543 LIFFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 364
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 363 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 184
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 183 TCPLFFLFFFSLVVI 139
>gb|CF471476.1|CF471476 RTDS1_3_G11.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_3_G11_A015 5', mRNA sequence
Length = 638
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / -2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 610 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 431
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 430 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 251
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 250 VKAKLISKLAEKKIK 206
Score = 198 bits (427), Expect = 3e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / +3
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 207 LIFFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 386
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 387 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 566
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 567 TCPLFFLFFFSLVVI 611
>gb|CO158459.1|CO158459 FLD1_7_C01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_7_C01_A029 3', mRNA sequence
Length = 530
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +1
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 22 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 201
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 202 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 381
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 382 VKAKLISKLAEKKIK 426
Score = 198 bits (427), Expect = 3e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / -1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 425 LIFFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 246
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 245 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 66
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 65 TCPLFFLFFFSLVVI 21
>gb|CV035667.1|CV035667 RTNACL1_41_D02.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_41_D02_A029 5', mRNA sequence
Length = 572
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 17 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 196
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 197 FHKLRNHYHCPIVNIDKLWSLVPKDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 376
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 377 VKAKLISKLAEKKIK 421
Score = 199 bits (430), Expect = 1e-050
Identities = 87/135 (64%), Positives = 97/135 (71%)
Frame = -1 / -3
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S+GT D S
Sbjct: 420 LIFFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSLGTRDHSLS 241
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 240 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 61
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 60 TCPLFFLFFFSLVVI 16
>gb|CV138649.1|CV138649 EST849858 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB566 5' end, mRNA sequence
Length = 717
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 120 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 299
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 300 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 479
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 480 VKAKLISKLAEKKIK 524
Score = 199 bits (428), Expect = 2e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / -3
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 523 LIFFSASLEISLAFTTMGCDGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 344
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 343 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 164
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 163 TCPLFFLFFFSLVVI 119
>gb|CV138662.1|CV138662 EST849871 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB579 5' end, mRNA sequence
Length = 827
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 201 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 380
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 381 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 560
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 561 VKAKLISKLAEKKIK 605
Score = 199 bits (428), Expect = 2e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 604 LIFFSASLEISLAFTTMGCDGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 425
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 424 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 245
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 244 TCPLFFLFFFSLVVI 200
>gb|DN448285.1|DN448285 EST944084 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIC312 5' end, mRNA sequence
Length = 708
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +1
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 109 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 288
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 289 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 468
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 469 VKAKLISKLAEKKIK 513
Score = 198 bits (427), Expect = 3e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 512 LIFFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 333
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 332 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 153
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 152 TCPLFFLFFFSLVVI 108
>gb|DN464985.1|DN464985 EST960784 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJJ42 5' end, mRNA sequence
Length = 631
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 44 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 223
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 224 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 403
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 404 VKAKLISKLAEKKIK 448
Score = 198 bits (427), Expect = 3e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 447 LIFFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 268
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 267 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 88
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 87 TCPLFFLFFFSLVVI 43
>gb|DR101071.1|DR101071 STRR1_70_H01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_70_H01_A033 3', mRNA sequence
Length = 615
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / -2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 575 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 396
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 395 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 216
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 215 VKAKLISKLAEKKIK 171
Score = 198 bits (427), Expect = 3e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / +1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 172 LIFFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 351
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 352 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 531
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 532 TCPLFFLFFFSLVVI 576
>gb|DR101144.1|DR101144 STRR1_70_H01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_70_H01_A033 5', mRNA sequence
Length = 576
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / -2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 533 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 354
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 353 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 174
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 173 VKAKLISKLAEKKIK 129
Score = 198 bits (427), Expect = 3e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / +1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 130 LIFFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 309
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 310 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 489
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 490 TCPLFFLFFFSLVVI 534
>gb|DR384514.1|DR384514 RTHG1_2_E12.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_2_E12_A029 5', mRNA sequence
Length = 640
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 27 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 206
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 207 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 386
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 387 VKAKLISKLAEKKIK 431
Score = 199 bits (428), Expect = 2e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / -1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 430 LIFFSASLEISLAFTTMGCDGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 251
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 250 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 71
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 70 TCPLFFLFFFSLVVI 26
>gb|DT626574.1|DT626574 EST1158498 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAC29 5' end, mRNA sequence
Length = 722
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 120 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 299
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 300 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 479
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 480 VKAKLISKLAEKKIK 524
Score = 199 bits (428), Expect = 2e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 523 LIFFSASLEISLAFTTMGCDGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 344
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 343 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 164
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 163 TCPLFFLFFFSLVVI 119
>gb|DT626597.1|DT626597 EST1158521 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAC53 5' end, mRNA sequence
Length = 829
Score = 287 bits (621), Expect = 6e-077
Identities = 113/135 (83%), Positives = 123/135 (91%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 201 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 380
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 381 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 560
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 561 VKAKLISKLAEKKIK 605
Score = 199 bits (428), Expect = 2e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / -1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 604 LIFFSASLEISLAFTTMGCDGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 425
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 424 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 245
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 244 TCPLFFLFFFSLVVI 200
>gb|CF471422.1|CF471422 RTDS1_3_G11.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_3_G11_A015 3', mRNA sequence
Length = 634
Score = 286 bits (619), Expect = 1e-076
Identities = 112/137 (81%), Positives = 125/137 (91%)
Frame = +2 / -2
Query: 44 AAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGM 223
+++TTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGM
Sbjct: 612 SSITTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGM 433
Query: 224 RYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKP 403
R+FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +P
Sbjct: 432 RHFHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQP 253
Query: 404 IVVKAKLISKVAEKKIK 454
IVVKAKLISK+AEKKIK
Sbjct: 252 IVVKAKLISKLAEKKIK 202
Score = 198 bits (427), Expect = 3e-050
Identities = 87/135 (64%), Positives = 96/135 (71%)
Frame = -1 / +2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 203 LIFFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 382
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 383 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 562
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 563 TCPLFFLFFFSLVVI 607
>gb|BX255385.1|BX255385 BX255385 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP005B12 similar to 60S ribosomal protein
L27A, mRNA sequence
Length = 593
Score = 283 bits (613), Expect = 7e-076
Identities = 112/135 (82%), Positives = 122/135 (90%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILF KYHPGYFGKVGMR+
Sbjct: 21 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFYKYHPGYFGKVGMRH 200
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LW++VP D A+A D AP IDVTQFGYFKVLGKG LP +PIV
Sbjct: 201 FHKLRNHYHCPIVNIDKLWALVPEDVKAKATPDSAPLIDVTQFGYFKVLGKGELPSQPIV 380
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 381 VKAKLISKLAEKKIK 425
Score = 191 bits (411), Expect = 5e-048
Identities = 85/135 (62%), Positives = 94/135 (69%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT S
Sbjct: 424 LIFFSASLEISLAFTTMGCEGSSPLPNTLKYPN*VTSIKGALSGVALALTSSGTRAHSLS 245
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYL KR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 244 ILTIGQ**WFLSLWKCLIPTLPK*PGWYL*KRMRWWCIPPALPLPPGCFLCLPIRPWPAL 65
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 64 TCPLFFLFFFSLVVI 20
>gb|BX251945.1|BX251945 BX251945 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP057E11 similar to 60S ribosomal protein
L27A, mRNA sequence
Length = 626
Score = 281 bits (609), Expect = 3e-075
Identities = 111/135 (82%), Positives = 122/135 (90%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFD+ HPGYFGKVGMR+
Sbjct: 27 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDRGHPGYFGKVGMRH 206
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LW++VP D A+A D AP IDVTQFGYFKVLGKG LP +PIV
Sbjct: 207 FHKLRNHYHCPIVNIDKLWALVPEDVKAKATPDSAPLIDVTQFGYFKVLGKGELPSQPIV 386
Query: 410 VKAKLISKVAEKKIK 454
VKAKLISK+AEKKIK
Sbjct: 387 VKAKLISKLAEKKIK 431
Score = 190 bits (409), Expect = 1e-047
Identities = 85/135 (62%), Positives = 94/135 (69%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT S
Sbjct: 430 LIFFSASLEISLAFTTMGCEGSSPLPNTLKYPN*VTSIKGALSGVALALTSSGTRAHSLS 251
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGW LSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 250 ILTIGQ**WFLSLWKCLIPTLPK*PGWPLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 71
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 70 TCPLFFLFFFSLVVI 26
>gb|BG275288.1|BG275288 NXSI_138_H06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_138_H06 5' similar to Arabidopsis thaliana
sequence At1g70600 60S ribosomal protein L27A see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 520
Score = 281 bits (608), Expect = 4e-075
Identities = 110/133 (82%), Positives = 120/133 (90%)
Frame = +2 / +1
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 19 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 198
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 199 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 378
Query: 410 VKAKLISKVAEKK 448
VK KLISK+AEKK
Sbjct: 379 VKXKLISKLAEKK 417
Score = 193 bits (415), Expect = 1e-048
Identities = 84/133 (63%), Positives = 93/133 (69%)
Frame = -1 / -3
Query: 447 FFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSML 268
FFSA+LE+SL TTMG GS+P P+TLK PN VTSI G S GT D S+L
Sbjct: 416 FFSASLEISLXFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLSIL 237
Query: 267 TAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTW 88
T GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T
Sbjct: 236 TIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTC 57
Query: 87 PRFLRFFLKRVVI 49
P F FF VVI
Sbjct: 56 PLFFLFFFSLVVI 18
>gb|BQ702786.1|BQ702786 NXSI_132_F04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_132_F04 5' similar to Arabidopsis thaliana
sequence At1g70600 60S ribosomal protein L27A see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 476
Score = 281 bits (607), Expect = 5e-075
Identities = 110/132 (83%), Positives = 120/132 (90%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 36 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 215
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 216 FHKLRNHYHCPIVNIDKLWSLVPKDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 395
Query: 410 VKAKLISKVAEK 445
VKAKLISK+AEK
Sbjct: 396 VKAKLISKLAEK 431
Score = 196 bits (422), Expect = 2e-049
Identities = 85/133 (63%), Positives = 95/133 (71%)
Frame = -1 / -2
Query: 447 FFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSML 268
FFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S+GT D S+L
Sbjct: 433 FFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSLGTRDHSLSIL 254
Query: 267 TAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTW 88
T GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T
Sbjct: 253 TIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTC 74
Query: 87 PRFLRFFLKRVVI 49
P F FF VVI
Sbjct: 73 PLFFLFFFSLVVI 35
>gb|CV035598.1|CV035598 RTNACL1_41_D02.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_41_D02_A029 3', mRNA sequence
Length = 559
Score = 278 bits (602), Expect = 2e-074
Identities = 109/135 (80%), Positives = 120/135 (88%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGKVGMR+
Sbjct: 36 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRIFFDKYHPGYFGKVGMRH 215
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LW +VP D A+A D AP IDVTQFG+FKVLGKG LP +P+V
Sbjct: 216 FHKLRNHYHCPIVNIDKLWFLVPKDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPMV 395
Query: 410 VKAKLISKVAEKKIK 454
VKAKLI K+AEKKIK
Sbjct: 396 VKAKLIFKLAEKKIK 440
Score = 194 bits (418), Expect = 6e-049
Identities = 84/135 (62%), Positives = 97/135 (71%)
Frame = -1 / -1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+L++SLA TTMG GS+P P+TLK PN VTSI G S+GT + S
Sbjct: 439 LIFFSASLKISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSLGTRNHSLS 260
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSK++RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 259 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKKMRWWCIPPALPLPPGCFLCLPIRPWPAL 80
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 79 TCPLFFLFFFSLVVI 35
>gb|BE209227.1|BE209227 NXNV_147_F01_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_147_F01 5' similar to Arabidopsis thaliana
sequence At1g70600 60S ribosomal protein L27A see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 479
Score = 277 bits (600), Expect = 5e-074
Identities = 109/135 (80%), Positives = 119/135 (88%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGM +
Sbjct: 15 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMSH 194
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 195 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 374
Query: 410 VKAKLISKVAEKKIK 454
V KLISK+AEKK K
Sbjct: 375 VXXKLISKLAEKKXK 419
Score = 196 bits (422), Expect = 2e-049
Identities = 86/135 (63%), Positives = 95/135 (70%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
L FFSA+LE+SL TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 418 LXFFSASLEISLXXTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 239
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK* +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 238 ILTIGQ**WFLSLWK*LIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 59
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 58 TCPLFFLFFFSLVVI 14
>gb|CV137416.1|CV137416 EST848625 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAO19 5' end, mRNA sequence
Length = 632
Score = 234 bits (506), Expect(2) = 5e-074
Identities = 90/112 (80%), Positives = 99/112 (88%)
Frame = +2 / +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 44 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 223
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKG 385
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+F +G G
Sbjct: 224 FHKLRNHYHCPIVNIDKLWSLVPKDVKAKATPDSAPLIDVTQFGFF*GIG*G 379
Score = 157 bits (337), Expect(2) = 7e-048
Identities = 68/112 (60%), Positives = 75/112 (66%)
Frame = -1 / -3
Query: 384 PFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLWK*RMPTLPK 205
P+P K PN VTSI G S+GT D S+LT GQ* SLWK +PTLPK
Sbjct: 378 PYPIP*KNPN*VTSIKGALSGVALALTSLGTRDHSLSILTIGQ**WFLSLWKCLIPTLPK 199
Query: 204 *PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVI 49
*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T P F FF VVI
Sbjct: 198 *PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTCPLFFLFFFSLVVI 43
Score = 63.8 bits (133), Expect(2) = 5e-074
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +2 / +3
Query: 359 GYFKVLGKGVLPPKPIVVKAKLISKVAEKKIK 454
G+FKVLGKG LP +PIVVKAKLISK+AEKKIK
Sbjct: 354 GFFKVLGKGELPSQPIVVKAKLISKLAEKKIK 449
Score = 53.8 bits (111), Expect(2) = 7e-048
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*P 358
LIFFSA+LE+SLA TTMG GS+P P+TLK P
Sbjct: 448 LIFFSASLEISLAFTTMGCEGSSPLPNTLKKP 353
>gb|BG039756.1|BG039756 NXSI_103_F06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_103_F06 5' similar to Arabidopsis thaliana
sequence At1g70600 60S ribosomal protein L27A see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 521
Score = 276 bits (597), Expect = 1e-073
Identities = 108/133 (81%), Positives = 118/133 (88%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 30 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 209
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 210 FHKLRNHYHCPIVNIDKLWSLVPKDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 389
Query: 410 VKAKLISKVAEKK 448
K LISK+AEKK
Sbjct: 390 XKGXLISKLAEKK 428
Score = 189 bits (407), Expect = 2e-047
Identities = 82/133 (61%), Positives = 92/133 (69%)
Frame = -1 / -2
Query: 447 FFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSML 268
FFSA+LE+S TMG GS+P P+TLK PN VTSI G S+GT D S+L
Sbjct: 427 FFSASLEISXPFXTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSLGTRDHSLSIL 248
Query: 267 TAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTW 88
T GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T
Sbjct: 247 TIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTC 68
Query: 87 PRFLRFFLKRVVI 49
P F FF VVI
Sbjct: 67 PLFFLFFFSLVVI 29
>gb|CO163866.1|CO163866 FLD1_44_F10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_44_F10_A029 3', mRNA sequence
Length = 790
Score = 276 bits (597), Expect = 1e-073
Identities = 108/130 (83%), Positives = 118/130 (90%)
Frame = +2 / -1
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 391 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 212
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 211 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 32
Query: 410 VKAKLISKVA 439
VKAKLISK+A
Sbjct: 31 VKAKLISKLA 2
Score = 188 bits (404), Expect = 5e-047
Identities = 82/130 (63%), Positives = 91/130 (70%)
Frame = -1 / +3
Query: 438 ATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAG 259
A+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S+LT G
Sbjct: 3 ASLEISLAFTTMGCDGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLSILTIG 182
Query: 258 Q*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRF 79
Q* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T P F
Sbjct: 183 Q**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTCPLF 362
Query: 78 LRFFLKRVVI 49
FF VVI
Sbjct: 363 FLFFFSLVVI 392
>gb|BQ291205.1|BQ291205 NXRV057_C06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV057_C06 5' similar to Arabidopsis thaliana
sequence At1g70600 60S ribosomal protein L27A see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 604
Score = 275 bits (595), Expect = 2e-073
Identities = 108/133 (81%), Positives = 118/133 (88%)
Frame = +2 / +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 125 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 304
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIV
Sbjct: 305 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIV 484
Query: 410 VKAKLISKVAEKK 448
AKLISK+AE K
Sbjct: 485 XXAKLISKLAEXK 523
Score = 187 bits (402), Expect = 9e-047
Identities = 82/131 (62%), Positives = 91/131 (69%)
Frame = -1 / -2
Query: 441 SATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTA 262
SA+LE+SLA TMG GS+P P+TLK PN VTSI G S GT D S+LT
Sbjct: 516 SASLEISLAXXTMGCDGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLSILTI 337
Query: 261 GQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPR 82
GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T P
Sbjct: 336 GQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTCPL 157
Query: 81 FLRFFLKRVVI 49
F FF VVI
Sbjct: 156 FFLFFFSLVVI 124
>gb|BF186158.1|BF186158 NXCI_133_F07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_133_F07 5' similar to Arabidopsis
thaliana sequence At1g70600 60S ribosomal protein L27A
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 466
Score = 234 bits (506), Expect(2) = 5e-072
Identities = 90/112 (80%), Positives = 99/112 (88%)
Frame = +2 / +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 20 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 199
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKG 385
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+F +G G
Sbjct: 200 FHKLRNHYHCPIVNIDKLWSLVPKDVKAKATPDSAPLIDVTQFGFF*GIG*G 355
Score = 157 bits (337), Expect(2) = 2e-045
Identities = 68/112 (60%), Positives = 75/112 (66%)
Frame = -1 / -2
Query: 384 PFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLWK*RMPTLPK 205
P+P K PN VTSI G S+GT D S+LT GQ* SLWK +PTLPK
Sbjct: 354 PYPIP*KNPN*VTSIKGALSGVALALTSLGTRDHSLSILTIGQ**WFLSLWKCLIPTLPK 175
Query: 204 *PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVI 49
*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T P F FF VVI
Sbjct: 174 *PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTCPLFFLFFFSLVVI 19
Score = 57.0 bits (118), Expect(2) = 5e-072
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +2 / +3
Query: 359 GYFKVLGKGVLPPKPIVVKAKLISKVAEKKI 451
G+FKVLGKG LP +PIVVK KLIS +AEKKI
Sbjct: 330 GFFKVLGKGELPSQPIVVKXKLISXLAEKKI 422
Score = 45.5 bits (93), Expect(2) = 2e-045
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1 / -1
Query: 450 IFFSATLEMSLALTTMGFGGSTPFPSTLK*P 358
IFFSA+ E+S TTMG GS+P P+TLK P
Sbjct: 421 IFFSASXEISXXFTTMGCEGSSPLPNTLKKP 329
>gb|AA556393.1|AA556393 248 Loblolly pine C Pinus taeda cDNA clone 1C1D, mRNA sequence
Length = 584
Score = 269 bits (581), Expect = 2e-071
Identities = 105/132 (79%), Positives = 116/132 (87%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGM++
Sbjct: 36 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMKH 215
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKL N ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLG G LP +PIV
Sbjct: 216 FHKLXNHYHCPIVNIDKLWSLVPXDVKAKATPDSAPLIDVTQFGFFKVLGXGXLPSQPIV 395
Query: 410 VKAKLISKVAEK 445
VKAKLISK+ K
Sbjct: 396 VKAKLISKLG*K 431
Score = 185 bits (399), Expect = 2e-046
Identities = 81/132 (61%), Positives = 90/132 (68%)
Frame = -1 / -2
Query: 444 FSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLT 265
F +LE+SLA TTMG G +P P+TLK PN VTSI G S GT D S+LT
Sbjct: 430 FQPSLEISLAFTTMGCEGXSPXPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLSILT 251
Query: 264 AGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWP 85
GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T P
Sbjct: 250 IGQ**WFXSLWKCFIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTCP 71
Query: 84 RFLRFFLKRVVI 49
F FF VVI
Sbjct: 70 LFFLFFFSLVVI 35
>gb|BE496587.1|BE496587 NXCI_020_H11_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_020_H11 5' similar to Arabidopsis
thaliana sequence At1g70600 60S ribosomal protein L27A
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 428
Score = 267 bits (577), Expect = 7e-071
Identities = 106/135 (78%), Positives = 116/135 (85%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKN KKRGHVSAGHGRIGKHRKHPGGRGNAG MHHHRILFDKYHPGYFGKVGMR+
Sbjct: 15 MTTRLKKNXKKRGHVSAGHGRIGKHRKHPGGRGNAGXMHHHRILFDKYHPGYFGKVGMRH 194
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG L +PIV
Sbjct: 195 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELXSQPIV 374
Query: 410 VKAKLISKVAEKKIK 454
V LISK+AEK IK
Sbjct: 375 VXXXLISKLAEKXIK 419
Score = 184 bits (396), Expect = 6e-046
Identities = 82/135 (60%), Positives = 91/135 (67%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LI FSA+LE+S TTMG S+P P+TLK PN VTSI G S GT D S
Sbjct: 418 LIXFSASLEISXXXTTMGCDXSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 239
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+ PALP PPGCFLCLP+RP PA
Sbjct: 238 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIXPALPLPPGCFLCLPIRPWPAL 59
Query: 93 TWPRFLRFFLKRVVI 49
T P F FF VVI
Sbjct: 58 TCPLFFXFFFSLVVI 14
>gb|BF049818.1|BF049818 NXCI_111_B11_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_111_B11 5' similar to Arabidopsis
thaliana sequence At1g70600 60S ribosomal protein L27A
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 428
Score = 267 bits (577), Expect = 7e-071
Identities = 104/133 (78%), Positives = 114/133 (85%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 30 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 209
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D + D AP IDVTQFG+ LGKG LP +PIV
Sbjct: 210 FHKLRNHYHCPIVNIDKLWSLVPEDVKXKXXPDSAPLIDVTQFGFXXXLGKGELPSQPIV 389
Query: 410 VKAKLISKVAEKK 448
VK KLIS +AEKK
Sbjct: 390 VKXKLISXLAEKK 428
Score = 182 bits (392), Expect = 2e-045
Identities = 84/133 (63%), Positives = 92/133 (69%)
Frame = -1 / -2
Query: 447 FFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSML 268
FFSA+ E+S TTMG GS+P P K PN VTSI G S GT D S+L
Sbjct: 427 FFSASXEISXXFTTMGCEGSSPLPXXXKNPN*VTSIKGALSGXXXXLTSSGTRDHSLSIL 248
Query: 267 TAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTW 88
T GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T
Sbjct: 247 TIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTC 68
Query: 87 PRFLRFFLKRVVI 49
P F FF VVI
Sbjct: 67 PLFFLFFFSLVVI 29
>gb|CN783911.1|CN783911 EST782602 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAE78 5' end, mRNA sequence
Length = 493
Score = 264 bits (570), Expect = 6e-070
Identities = 103/124 (83%), Positives = 113/124 (91%)
Frame = +2 / +3
Query: 83 RGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCP 262
RGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+FHKLRN ++CP
Sbjct: 3 RGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRHFHKLRNHYHCP 182
Query: 263 AVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKLISKVAE 442
VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIVVKAKLISK+AE
Sbjct: 183 IVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIVVKAKLISKLAE 362
Query: 443 KKIK 454
KKIK
Sbjct: 363 KKIK 374
Score = 188 bits (404), Expect = 5e-047
Identities = 81/123 (65%), Positives = 90/123 (73%)
Frame = -1 / -1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 373 LIFFSASLEISLAFTTMGCDGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 194
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 193 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 14
Query: 93 TWP 85
T P
Sbjct: 13 TCP 5
>gb|AW042769.1|AW042769 ST25B09 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST25B09, mRNA sequence
Length = 601
Score = 247 bits (533), Expect(2) = 6e-069
Identities = 94/112 (83%), Positives = 102/112 (91%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 69 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 248
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKG 385
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG
Sbjct: 249 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKG 404
Score = 163 bits (350), Expect = 1e-039
Identities = 70/114 (61%), Positives = 78/114 (68%)
Frame = -1 / -1
Query: 390 STPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLWK*RMPTL 211
++P P+TLK PN VTSI G S GT D S+LT GQ* SLWK +PTL
Sbjct: 409 ASPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLSILTIGQ**WFLSLWKCLIPTL 230
Query: 210 PK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVI 49
PK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T P F FF VVI
Sbjct: 229 PK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTCPLFFLFFFSLVVI 68
Score = 34.5 bits (69), Expect(2) = 6e-069
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2 / +1
Query: 359 GYFKVLGKGVLPPKPIVVKAKLISKVAEKKIK 454
G+ + + LP +PIVVK KLISK+A ++ K
Sbjct: 379 GFLRYWVRAKLPSQPIVVKGKLISKLA*EEXK 474
>gb|AL750653.1|AL750653 AL750653 RN Pinus pinaster cDNA clone RN05H02 similar to RP L27,
mRNA sequence
Length = 554
Score = 259 bits (560), Expect = 1e-068
Identities = 101/122 (82%), Positives = 111/122 (90%)
Frame = +2 / +2
Query: 89 HVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPAV 268
HVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+FHKLRN ++CP V
Sbjct: 2 HVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRHFHKLRNHYHCPIV 181
Query: 269 NIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKK 448
NI++LW++VP D A+A D AP IDVTQFGYFKVLGKG LP +PIVVKAKLISK+AEKK
Sbjct: 182 NIDKLWALVPEDVKAKATPDSAPLIDVTQFGYFKVLGKGELPSQPIVVKAKLISKLAEKK 361
Query: 449 IK 454
IK
Sbjct: 362 IK 367
Score = 181 bits (390), Expect = 4e-045
Identities = 79/121 (65%), Positives = 88/121 (72%)
Frame = -1 / -3
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT S
Sbjct: 366 LIFFSASLEISLAFTTMGCEGSSPLPNTLKYPN*VTSIKGALSGVALALTSSGTRAHSLS 187
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 186 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 7
Query: 93 T 91
T
Sbjct: 6 T 4
>gb|CR392253.1|CR392253 CR392253 RN Pinus pinaster cDNA clone RN30A03, mRNA sequence
Length = 406
Score = 257 bits (555), Expect = 7e-068
Identities = 100/121 (82%), Positives = 110/121 (90%)
Frame = +2 / +1
Query: 89 HVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPAV 268
HVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+FHKLRN ++CP V
Sbjct: 1 HVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRHFHKLRNHYHCPIV 180
Query: 269 NIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKK 448
NI++LW++VP D A+A D AP IDVTQFGYFKVLGKG LP +PIVVKAKLISK+AEKK
Sbjct: 181 NIDKLWALVPEDVKAKATPDSAPLIDVTQFGYFKVLGKGELPSQPIVVKAKLISKLAEKK 360
Query: 449 I 451
I
Sbjct: 361 I 363
Score = 181 bits (390), Expect = 4e-045
Identities = 79/121 (65%), Positives = 88/121 (72%)
Frame = -1 / -3
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT S
Sbjct: 365 LIFFSASLEISLAFTTMGCEGSSPLPNTLKYPN*VTSIKGALSGVALALTSSGTRAHSLS 186
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 185 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 6
Query: 93 T 91
T
Sbjct: 5 T 3
>gb|CR394312.1|CR394312 CR394312 RN Pinus pinaster cDNA clone RN76F06, mRNA sequence
Length = 551
Score = 255 bits (551), Expect = 3e-067
Identities = 100/122 (81%), Positives = 110/122 (90%)
Frame = +2 / +1
Query: 89 HVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPAV 268
HVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+FHKLRN ++CP V
Sbjct: 1 HVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRHFHKLRNHYHCPIV 180
Query: 269 NIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKK 448
NI++LW++VP D A+A D AP IDVTQFGYFKVLGKG LP + IVVKAKLISK+AEKK
Sbjct: 181 NIDKLWALVPEDVKAKATPDSAPLIDVTQFGYFKVLGKGELPSQXIVVKAKLISKLAEKK 360
Query: 449 IK 454
IK
Sbjct: 361 IK 366
Score = 178 bits (383), Expect = 4e-044
Identities = 78/121 (64%), Positives = 87/121 (71%)
Frame = -1 / -1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTM GS+P P+TLK PN VTSI G S GT S
Sbjct: 365 LIFFSASLEISLAFTTMXCEGSSPLPNTLKYPN*VTSIKGALSGVALALTSSGTRAHSLS 186
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA
Sbjct: 185 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPAL 6
Query: 93 T 91
T
Sbjct: 5 T 3
>gb|BQ655565.1|BQ655565 NXRV096_C05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV096_C05 5' similar to Arabidopsis thaliana
sequence At1g70600 60S ribosomal protein L27A see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 527
Score = 252 bits (544), Expect = 2e-066
Identities = 99/129 (76%), Positives = 110/129 (85%)
Frame = +2 / +2
Query: 68 KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRN 247
K +K H SAGHGRIGKHRKHPGG GNA GMHHHRI FDKYHPGYFGKVGMR+FHKLRN
Sbjct: 23 KXXRKXXHXSAGHGRIGKHRKHPGGXGNAXGMHHHRIXFDKYHPGYFGKVGMRHFHKLRN 202
Query: 248 KFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKLI 427
++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLGKG LP +PIVVKAKLI
Sbjct: 203 HYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGKGELPSQPIVVKAKLI 382
Query: 428 SKVAEKKIK 454
SK+AEKKIK
Sbjct: 383 SKLAEKKIK 409
Score = 180 bits (388), Expect = 8e-045
Identities = 80/129 (62%), Positives = 89/129 (68%)
Frame = -1 / -3
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSA+LE+SLA TTMG GS+P P+TLK PN VTSI G S GT D S
Sbjct: 408 LIFFSASLEISLAFTTMGCEGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLS 229
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
+LT GQ* SLWK +PTLPK*PGWYLSK +RWWC+P ALP PPGCFLCLP+RP PA
Sbjct: 228 ILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKXMRWWCIPXALPXPPGCFLCLPIRPWPAL 49
Query: 93 TWPRFLRFF 67
FL F
Sbjct: 48 XCXSFLXXF 22
>gb|AW011379.1|AW011379 ST20A12 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST20A12, mRNA sequence
Length = 601
Score = 250 bits (540), Expect = 9e-066
Identities = 96/118 (81%), Positives = 104/118 (88%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGM +
Sbjct: 189 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMGH 368
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKP 403
FHKLRN ++CP VNI++LWS+VP D A+A D AP IDVTQFG+FKVLG G LP KP
Sbjct: 369 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKATPDSAPLIDVTQFGFFKVLGXGELPSKP 542
Score = 171 bits (369), Expect = 3e-042
Identities = 74/122 (60%), Positives = 82/122 (67%)
Frame = -1 / -1
Query: 414 LTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSL 235
L +G GS+P P+TLK PN VTSI G S GT D S+LT GQ* SL
Sbjct: 553 LXXVGLDGSSPLPNTLKNPN*VTSIKGALSGVALALTSSGTRDHSLSILTIGQ**WFLSL 374
Query: 234 WK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRV 55
WK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T P F FF V
Sbjct: 373 WKCPIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTCPLFFLFFFSLV 194
Query: 54 VI 49
VI
Sbjct: 193 VI 188
>gb|AW056662.1|AW056662 ST54C10 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST54C10, mRNA sequence
Length = 405
Score = 249 bits (538), Expect = 2e-065
Identities = 96/122 (78%), Positives = 104/122 (85%)
Frame = +2 / +1
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHG IGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 40 MTTRLKKNRKKRGHVSAGHGHIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 219
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D +A D AP IDVTQFG+F LGKG LPP IV
Sbjct: 220 FHKLRNHYHCPIVNIDKLWSLVPEDVKXKATPDSAPLIDVTQFGFFXXLGKGELPPXXIV 399
Query: 410 VK 415
K
Sbjct: 400 XK 405
Score = 164 bits (353), Expect = 5e-040
Identities = 74/120 (61%), Positives = 80/120 (66%)
Frame = -1 / -2
Query: 408 TMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLWK 229
TM GGS+P P K PN VTSI G S GT D S+LT GQ* SLWK
Sbjct: 398 TMXXGGSSPLPXXXKNPN*VTSIKGALSGVAXXLTSSGTRDHSLSILTIGQ**WFLSLWK 219
Query: 228 *RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVI 49
+PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+ P PA T P F FF VVI
Sbjct: 218 CLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPICPWPALTCPLFFLFFFSLVVI 39
>gb|AW587643.1|AW587643 ST60H05 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST60H05, mRNA sequence
Length = 420
Score = 241 bits (521), Expect = 4e-063
Identities = 94/121 (77%), Positives = 102/121 (84%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 57 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 236
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIV 409
FHKLRN ++CP VNI++LWS+VP D A+ D AP DVTQFG+F LGKG L IV
Sbjct: 237 FHKLRNHYHCPIVNIDKLWSLVPEDVKAKXTPDSAPXXDVTQFGFFXXLGKGELXXXXIV 416
Query: 410 V 412
V
Sbjct: 417 V 419
Score = 162 bits (349), Expect = 2e-039
Identities = 72/121 (59%), Positives = 79/121 (65%)
Frame = -1 / -3
Query: 411 TTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLW 232
TTM S+P P+ K PN VTS G S GT D S+LT GQ* SLW
Sbjct: 418 TTMXXXXSSPLPNXXKNPN*VTSXXGALSGVXLALTSSGTRDHSLSILTIGQ**WFLSLW 239
Query: 231 K*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVV 52
K +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T P F FF VV
Sbjct: 238 KCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTCPLFFLFFFSLVV 59
Query: 51 I 49
I
Sbjct: 58 I 56
>gb|BF517851.1|BF517851 NXSI_029_A10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_029_A10 5' similar to Arabidopsis thaliana
sequence At1g70600 60S ribosomal protein L27A see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 393
Score = 204 bits (441), Expect(2) = 4e-063
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 27 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 206
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTD 304
FHKLRN ++CP VNI++LWS+VP D
Sbjct: 207 FHKLRNHYHCPIVNIDKLWSLVPED 281
Score = 140 bits (301), Expect(2) = 3e-038
Identities = 57/83 (68%), Positives = 62/83 (74%)
Frame = -1 / -3
Query: 297 GTIDQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCL 118
GT D S+LT GQ* SLWK +PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCL
Sbjct: 274 GTRDHSLSILTIGQ**WFLSLWKCLIPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCL 95
Query: 117 PMRPCPADTWPRFLRFFLKRVVI 49
P+RP PA T P F FF VVI
Sbjct: 94 PIRPWPALTCPLFFLFFFSLVVI 26
Score = 57.0 bits (118), Expect(2) = 4e-063
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = +2 / +1
Query: 296 PTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVK 415
P D AP IDVTQFG+F VLGKG LP +PIVVK
Sbjct: 274 PRTSXXXXXPDSAPLIDVTQFGFFXVLGKGELPSQPIVVK 393
Score = 38.2 bits (77), Expect(2) = 3e-038
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -1 / -2
Query: 411 TTMGFGGSTPFPSTLK*PNCVTSICG 334
TTMG GS+P P+T K PN VTSI G
Sbjct: 389 TTMGCEGSSPLPNTXKNPN*VTSIKG 312
>gb|BX682073.1|BX682073 BX682073 RS Pinus pinaster cDNA clone RS69G03, mRNA sequence
Length = 516
Score = 155 bits (333), Expect(2) = 1e-060
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 36 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 215
Score = 119 bits (255), Expect(2) = 2e-039
Identities = 44/58 (75%), Positives = 48/58 (82%)
Frame = -1 / -3
Query: 222 MPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVI 49
+PTLPK*PGWYLSKR+RWWC+PPALP PPGCFLCLP+RP PA T P F FF VVI
Sbjct: 208 IPTLPK*PGWYLSKRMRWWCIPPALPLPPGCFLCLPIRPWPALTCPLFFLFFFSLVVI 35
Score = 98.7 bits (209), Expect(2) = 1e-060
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = +2 / +1
Query: 272 IERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKKI 451
+++LW++VP D A+A D AP IDVTQFGY KV GKG LP +PIVVKAKLISK+AEKKI
Sbjct: 265 MDKLWALVPEDVKAKATPDSAPLIDVTQFGYLKV*GKGELPSQPIVVKAKLISKLAEKKI 444
Query: 452 K 454
K
Sbjct: 445 K 447
Score = 62.9 bits (131), Expect(2) = 2e-039
Identities = 31/54 (57%), Positives = 35/54 (64%)
Frame = -1 / -2
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGT 292
LIFFSA+LE+SLA TTMG GS+P P TL+ PN VTSI G S GT
Sbjct: 446 LIFFSASLEISLAFTTMGCEGSSPLPYTLRYPN*VTSIKGALSGVALALTSSGT 285
>gb|BE762148.1|BE762148 NXCI_082_C07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_082_C07 5' similar to Arabidopsis
thaliana sequence At1g70600 60S ribosomal protein L27A
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 379
Score = 231 bits (499), Expect = 4e-060
Identities = 89/114 (78%), Positives = 97/114 (85%)
Frame = +2 / +3
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAG MHHHRILFDKYHPGYFGK GMR+
Sbjct: 36 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGXMHHHRILFDKYHPGYFGKXGMRH 215
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVL 391
KLRN ++CP VNI++LWS+VP D + D AP IDVTQFG+FKVLGKG L
Sbjct: 216 XXKLRNHYHCPIVNIDKLWSLVPEDVKXKXTPDSAPLIDVTQFGFFKVLGKGEL 377
Score = 151 bits (324), Expect = 5e-036
Identities = 71/114 (62%), Positives = 78/114 (68%)
Frame = -1 / -1
Query: 390 STPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLWK*RMPTL 211
S+P P+TLK PN VTSI G S GT D S+LT GQ* SL K +P L
Sbjct: 376 SSPLPNTLKNPN*VTSIKGALSGVXXXLTSSGTRDHSLSILTIGQ**WFLSLXKCLIPXL 197
Query: 210 PK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVI 49
PK*PGWYLSKR+RWWC+ PALP PPGCFLCLP+RP PA T P F FF VVI
Sbjct: 196 PK*PGWYLSKRMRWWCIXPALPLPPGCFLCLPIRPWPALTCPLFFLFFFSLVVI 35
>gb|BF517009.1|BF517009 NXSI_008_B05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_008_B05 5' similar to Arabidopsis thaliana
sequence At1g70600 60S ribosomal protein L27A see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 336
Score = 226 bits (489), Expect = 9e-059
Identities = 85/106 (80%), Positives = 92/106 (86%)
Frame = +2 / +1
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMR+
Sbjct: 19 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRH 198
Query: 230 FHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYF 367
FHKLRN ++CP VNI++LWS+VP D D AP DVTQFG+F
Sbjct: 199 FHKLRNHYHCPIVNIDKLWSLVPEDVKXXXTPDSAPXXDVTQFGFF 336
Score = 148 bits (318), Expect = 4e-035
Identities = 68/106 (64%), Positives = 73/106 (68%)
Frame = -1 / -2
Query: 366 K*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGWYL 187
K PN VTS G S GT D S+LT GQ* SLWK +PTLPK*PGWYL
Sbjct: 335 KNPN*VTSXXGALSGVXXXLTSSGTRDHSLSILTIGQ**WFLSLWKCLIPTLPK*PGWYL 156
Query: 186 SKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVI 49
SKR+RWWC+PPALP PPGCFLCLP+RP PA T P F FF VVI
Sbjct: 155 SKRMRWWCIPPALPLPPGCFLCLPIRPWPALTCPLFFLFFFSLVVI 18
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 313,761,415
Number of Sequences: 355925
Number of extensions: 4215595
Number of successful extensions: 46140
Number of sequences better than 1.0e-020: 119
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9705176100
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)