TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455820.2.1
(1312 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR019196.1|DR019196 STRS1_28_A02.g1_A034 Shoot tip pitch... 494 e-139
gb|DR694320.1|DR694320 EST1084412 Normalized pine embryo li... 494 e-139
gb|DR684177.1|DR684177 EST1074254 Normalized pine embryo li... 452 e-126
gb|DR681790.1|DR681790 EST1071865 Normalized pine embryo li... 394 e-109
gb|DT634061.1|DT634061 EST1148992 Normalized pine embryo li... 371 e-107
gb|DR685372.1|DR685372 EST1075449 Normalized pine embryo li... 389 e-107
gb|DR079207.1|DR079207 RTFEPL1_9_F09.g1_A029 Roots plus add... 387 e-107
gb|DR179202.1|DR179202 RTMNUT1_16_D10.g1_A029 Roots minus m... 387 e-107
gb|DR120277.1|DR120277 RTMG1_28_D11.g2_A029 Roots minus mag... 370 e-102
gb|DT638744.1|DT638744 EST1153675 Normalized pine embryo li... 356 2e-097
gb|DR687475.1|DR687475 EST1077557 Normalized pine embryo li... 350 2e-095
gb|DR694609.1|DR694609 EST1084701 Normalized pine embryo li... 307 1e-082
dbj|BD273073.1| Materials and methods for the modification ... 242 4e-063
gb|CO175416.1|CO175416 NDL1_54_D01.g1_A029 Needles control ... 233 2e-060
gb|CV031633.1|CV031633 RTNACL1_2_F07.g1_A029 Roots plus add... 233 2e-060
gb|DR093044.1|DR093044 STRR1_5_E03.g1_A033 Stem Response Re... 233 2e-060
gb|CF663414.1|CF663414 RTCNT1_2_E05.g1_A029 Root control Pi... 232 4e-060
dbj|BD273071.1| Materials and methods for the modification ... 232 6e-060
gb|DR079131.1|DR079131 RTFEPL1_9_F09.b1_A029 Roots plus add... 231 8e-060
dbj|BD272970.1| Materials and methods for the modification ... 199 3e-050
gb|DT634318.1|DT634318 EST1149249 Normalized pine embryo li... 193 2e-048
gb|DR693137.1|DR693137 EST1083225 Normalized pine embryo li... 189 4e-047
gb|DR118494.1|DR118494 RTMG1_17_H05.b1_A029 Roots minus mag... 188 5e-047
dbj|BD273072.1| Materials and methods for the modification ... 180 2e-044
gb|DR687871.1|DR687871 EST1077954 Normalized pine embryo li... 178 8e-044
gb|DR092962.1|DR092962 STRR1_5_E03.b1_A033 Stem Response Re... 176 4e-043
gb|DR179128.1|DR179128 RTMNUT1_16_D10.b1_A029 Roots minus m... 174 1e-042
gb|DT638113.1|DT638113 EST1153044 Normalized pine embryo li... 168 6e-041
gb|CF471332.1|CF471332 RTDS1_2_D06.g1_A015 Drought-stressed... 101 2e-038
gb|AW226167.1|AW226167 ST79B06 Pine TriplEx shoot tip libra... 150 2e-035
gb|CO175343.1|CO175343 NDL1_54_D01.b1_A029 Needles control ... 144 2e-033
gb|CO366765.1|CO366765 RTK1_29_H12.g1_A029 Roots minus pota... 142 5e-033
gb|CX647228.1|CX647228 COLD1_14_B03.g1_A029 Root cold Pinus... 138 6e-032
gb|DR118577.1|DR118577 RTMG1_17_H05.g1_A029 Roots minus mag... 136 4e-031
gb|DR081782.1|DR081782 RTFEPL1_32_F04.b1_A029 Roots plus ad... 127 2e-028
gb|DR693249.1|DR693249 EST1083337 Normalized pine embryo li... 123 2e-027
gb|BX682839.1|BX682839 BX682839 Pinus pinaster differenciat... 105 9e-022
>gb|DR019196.1|DR019196 STRS1_28_A02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_A02_A034 5', mRNA sequence
Length = 824
Score = 494 bits (1073), Expect = e-139
Identities = 186/249 (74%), Positives = 213/249 (85%)
Frame = -3 / +1
Query: 1115 IDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTSAY 936
++ W LI NFT+FQLA++ +FLLHE++FFLSGLP +L E GL +KYKIQ K+NT A
Sbjct: 76 LERGWLYLITNFTDFQLASIGSFLLHESIFFLSGLPFILLETTGLLSKYKIQSKTNTVAA 255
Query: 935 QNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFY 756
Q +C+ RL+LYH VNLPVM+ SYP F+FMG+ S LPLP W VVVSQ++ YF+LEDF+FY
Sbjct: 256 QEKCITRLLLYHFGVNLPVMVVSYPVFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFY 435
Query: 755 WGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLW 576
WGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA ++GPA+TGPHLFTLW
Sbjct: 436 WGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLW 615
Query: 575 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWL 396
LWM LRVLETVEAH GY FPWS S PLYGG+DFHDYHHR+LYTKSGNY+STF YMDWL
Sbjct: 616 LWMSLRVLETVEAHCGYDFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDWL 795
Query: 395 FGTDKDYRK 369
FGTDK YRK
Sbjct: 796 FGTDKGYRK 822
Score = 258 bits (558), Expect = 6e-068
Identities = 133/243 (54%), Positives = 146/243 (60%)
Frame = +1 / -1
Query: 367 ALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*AST 546
+ R LSVPNNQSM* V+ *FPDFV S+R* *SWKS PPY+G F+ L GK *P AST
Sbjct: 824 SFRYPLSVPNNQSM*VKVDE*FPDFV*SSR***SWKSAPPYNGNSFEMLQGKS*PQCAST 645
Query: 547 VSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLYS 726
VS T IHS V R*GPV AGP A PRNKISAG AYSDVKP GVAYS TL*TCLYS
Sbjct: 644 VSNTRKLIHSQSVNR*GPVMAGPIIVAKPRNKISAGCAYSDVKPNGVAYS**TL*TCLYS 465
Query: 727 HFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMNLKAGYEKIMTGRFTHTW* 906
HFVC L PQ* KSS Q G G L+ P+NL GYE MTGR T
Sbjct: 464 HFVCKILWPQ*KTKSSKMK*QTSWDTTTFQDGSGSTLVMPINLNTGYETTMTGRLTPK*Y 285
Query: 907 RMRRKTHLFW*AEVLLFFWILYLAKSPKRSKRREGRPERKKTVSWSRKVTTVASWNSVKL 1086
R H A V + ILYL P S +G P++KK +S RK+ AS SVK
Sbjct: 284 SSSRVIHFSCAATVFVLL*ILYLLNKPVVSSNMKGSPDKKKMLS*RRKLPMEAS*KSVKF 105
Query: 1087 AIR 1095
IR
Sbjct: 104 VIR 96
Score = 147 bits (315), Expect = 2e-034
Identities = 69/194 (35%), Positives = 104/194 (53%)
Frame = -2 / +3
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQ+ E+++H C ++M + ++ C+PA H +SC+QI+G + ++ L CI
Sbjct: 216 QVQNSEQDEHSCCTRKMYYSTAAISFWCQPASHGGFISCIQIYGHDKRATTTVLESSCIP 395
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVPGIRXXX 616
+ L GF LLG Q Y+MA+Q SQ *+R+T+WF+IG+C *N VP R
Sbjct: 396 AGLLFHFGGFCFLLGPQNFTYKMAVQACSQCSS*IRNTIWFDIGVCASC*NLVPWFRYNY 575
Query: 615 XXXXXXXXSLHPVAVDGVEGFGDS*SSQRLSLPMEPIKFPAAVWRLGLP*LPSPCAVHKV 436
+H +A+D G+ + L +E K VWR P*L S A++KV
Sbjct: 576 WTCHYWASPIHTLAMDEFASVGNCRGTLWL*FSLEHFKAIPVVWRS*FP*LSSSTALYKV 755
Query: 435 RELCLNICLHGLVV 394
EL ++ LHGLV+
Sbjct: 756 WELLIDFHLHGLVI 797
Score = 129 bits (277), Expect = 3e-029
Identities = 58/149 (38%), Positives = 95/149 (63%)
Frame = +3 / -3
Query: 369 LAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAIQRQEI*WAPWEVIAAVSFNC 548
L + + + PVHV++ ++P LC++ ++M++ME+ ++IQR+ +* AP ++I +
Sbjct: 822 LPVPFISPK*PVHVSESR*VIPRLCIEQSMMIIMEISSSIQRE*L*NAPRKIITTMCLYS 643
Query: 549 LQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVGIFRC*TKGCGVLMVDAVNVFV*P 728
Q+ Q HP P+ E +R S R+NN E++EQ+FS + I RC TK C V M++ VN+ V P
Sbjct: 642 FQHSQTHP*PKCE*VRPSNGRSNNCSETKEQDFSRMRILRCQTKWCCVFMMNTVNMLVQP 463
Query: 729 FRMQCPVPPIEYKILKDKVEKNLRYNNRP 815
F M V P+E KIL++++ L YN P
Sbjct: 462 FCM*NSVAPVENKILQNEITNQLGYNYFP 376
>gb|DR694320.1|DR694320 EST1084412 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEA88 3' end, mRNA sequence
Length = 823
Score = 494 bits (1073), Expect = e-139
Identities = 186/249 (74%), Positives = 213/249 (85%)
Frame = -3 / +3
Query: 1115 IDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTSAY 936
++ W LI NFT+FQLA++ +FLLHE++FFLSGLP +L E GL +KYKIQ K+NT A
Sbjct: 72 LERGWLYLITNFTDFQLASIGSFLLHESIFFLSGLPFILLETTGLLSKYKIQSKTNTVAA 251
Query: 935 QNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFY 756
Q +C+ RL+LYH VNLPVM+ SYP F+FMG+ S LPLP W VVVSQ++ YF+LEDF+FY
Sbjct: 252 QEKCITRLLLYHFGVNLPVMVVSYPVFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFY 431
Query: 755 WGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLW 576
WGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA ++GPA+TGPHLFTLW
Sbjct: 432 WGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLW 611
Query: 575 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWL 396
LWM LRVLETVEAH GY FPWS S PLYGG+DFHDYHHR+LYTKSGNY+STF YMDWL
Sbjct: 612 LWMSLRVLETVEAHCGYDFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDWL 791
Query: 395 FGTDKDYRK 369
FGTDK YRK
Sbjct: 792 FGTDKGYRK 818
Score = 266 bits (576), Expect = 2e-070
Identities = 136/244 (55%), Positives = 149/244 (61%)
Frame = +1 / -1
Query: 364 FALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*AS 543
F+ R LSVPNNQSM* V+ *FPDFV S+R* *SWKS PPY+G F+ L GK *P AS
Sbjct: 823 FSFRYPLSVPNNQSM*VKVDE*FPDFV*SSR***SWKSAPPYNGNSFEMLQGKS*PQCAS 644
Query: 544 TVSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLY 723
TVS T IHS V R*GPV AGP ANPRNKISAG AYSDVKP GVAYS TL*TCLY
Sbjct: 643 TVSNTRKLIHSQSVNR*GPVMAGPIIVANPRNKISAGCAYSDVKPNGVAYS**TL*TCLY 464
Query: 724 SHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMNLKAGYEKIMTGRFTHTW 903
SHFVC L PQ* KSS Q G GR L+ P+NL GYE MTGR T
Sbjct: 463 SHFVCKILWPQ*KTKSSKMK*QTSWDTTTFQDGSGRTLVMPINLNTGYETTMTGRLTPK* 284
Query: 904 *RMRRKTHLFW*AEVLLFFWILYLAKSPKRSKRREGRPERKKTVSWSRKVTTVASWNSVK 1083
R H A V + ILYL P S +G P++KK +S RK+ AS SVK
Sbjct: 283 YSSSRVIHFSCAATVFVLL*ILYLLNKPVVSSNMKGSPDKKKMLS*RRKLPMEAS*KSVK 104
Query: 1084 LAIR 1095
IR
Sbjct: 103 FVIR 92
Score = 150 bits (322), Expect = 2e-035
Identities = 71/194 (36%), Positives = 105/194 (54%)
Frame = -2 / +2
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQ+ E+++H C ++M + ++ C+PA H +SC+QI+G + S+ L CI
Sbjct: 212 QVQNSEQDEHSCCTRKMYYSTAAISFWCQPASHGGFISCIQIYGHDKRSTTTVLESSCIP 391
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVPGIRXXX 616
+ L GF LLG Q Y+MA+Q SQ *+R+T+WF+IG+C *N VP IR
Sbjct: 392 AGLLFHFGGFCFLLGPQNFTYKMAVQACSQCSS*IRNTIWFDIGVCASC*NLVPWIRYNY 571
Query: 615 XXXXXXXXSLHPVAVDGVEGFGDS*SSQRLSLPMEPIKFPAAVWRLGLP*LPSPCAVHKV 436
+H +A+D G+ + L +E K VWR P*L S A++KV
Sbjct: 572 WTCHYWASPIHTLAMDEFASVGNCRGTLWL*FSLEHFKAIPVVWRS*FP*LSSSTALYKV 751
Query: 435 RELCLNICLHGLVV 394
EL ++ LHGLV+
Sbjct: 752 WELLIDFHLHGLVI 793
Score = 131 bits (280), Expect = 1e-029
Identities = 59/149 (39%), Positives = 95/149 (63%)
Frame = +3 / -3
Query: 369 LAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAIQRQEI*WAPWEVIAAVSFNC 548
L + + + PVHV++ ++P LC++ ++M++ME+ ++IQR+ +* AP ++I +
Sbjct: 818 LPVPFISPK*PVHVSESR*VIPRLCIEQSMMIIMEISSSIQRE*L*NAPRKIITTMCLYS 639
Query: 549 LQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVGIFRC*TKGCGVLMVDAVNVFV*P 728
Q+ Q HP P+ E +R S R+NN ES+EQ+FS + I RC TK C V M++ VN+ V P
Sbjct: 638 FQHSQTHP*PKCE*VRPSNGRSNNCSESKEQDFSRMRILRCQTKWCCVFMMNTVNMLVQP 459
Query: 729 FRMQCPVPPIEYKILKDKVEKNLRYNNRP 815
F M V P+E KIL++++ L YN P
Sbjct: 458 FCM*NSVAPVENKILQNEITNQLGYNYFP 372
>gb|DR684177.1|DR684177 EST1074254 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAP73 3' end, mRNA sequence
Length = 820
Score = 452 bits (981), Expect = e-126
Identities = 170/231 (73%), Positives = 197/231 (85%)
Frame = -3 / +2
Query: 1115 IDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTSAY 936
++ W LI NFT+FQLA++ +FLLHE++FFLSGLP +L E GL +KYKIQ K+NT A
Sbjct: 128 LERGWLYLITNFTDFQLASIGSFLLHESIFFLSGLPFILLETTGLLSKYKIQSKTNTVAA 307
Query: 935 QNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFY 756
Q +C+ RL+LYH VNLPVM+ SYP F+FMG+ S LPLP W VVVSQ++ YF+LEDF+FY
Sbjct: 308 QEKCITRLLLYHFGVNLPVMVVSYPVFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFY 487
Query: 755 WGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLW 576
WGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA ++GPA+TGPHLFTLW
Sbjct: 488 WGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLW 667
Query: 575 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYA 423
LWM LRVLETVEAH GY FPWS S PLYGG+DFHDYHHR+LYTKSGNY+
Sbjct: 668 LWMSLRVLETVEAHCGYDFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYS 820
Score = 234 bits (506), Expect = 9e-061
Identities = 121/223 (54%), Positives = 132/223 (59%)
Frame = +1 / -2
Query: 427 *FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*ASTVSKTLNTIHSHRVKR*GPVR 606
*FPDFV S+R* *SWKS PPY+G F+ L GK *P ASTVS T IHS V R*GPV
Sbjct: 816 *FPDFV*SSR***SWKSAPPYNGNSFEMLQGKS*PQCASTVSNTRKLIHSQSVNR*GPVM 637
Query: 607 AGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLYSHFVCNALCPQ*NIKSSXXXX 786
AGP A PRNKISAG AYSDVKP GVAYS TL*TCLYSHFVC L PQ* KSS
Sbjct: 636 AGPIIVAKPRNKISAGCAYSDVKPNGVAYS**TL*TCLYSHFVCKILWPQ*KTKSSKMK* 457
Query: 787 XXXXXXXXXQCGKGRELLRPMNLKAGYEKIMTGRFTHTW*RMRRKTHLFW*AEVLLFFWI 966
Q G G L+ P+NL GYE MTGR T R H A V + I
Sbjct: 456 QTSWDTTTFQDGSGSTLVMPINLNTGYETTMTGRLTPK*YSSSRVIHFSCAATVFVLL*I 277
Query: 967 LYLAKSPKRSKRREGRPERKKTVSWSRKVTTVASWNSVKLAIR 1095
LYL P S +G P++KK +S RK+ AS SVK IR
Sbjct: 276 LYLLNKPVVSSNMKGSPDKKKMLS*RRKLPMEAS*KSVKFVIR 148
Score = 134 bits (287), Expect = 1e-030
Identities = 64/183 (34%), Positives = 96/183 (52%)
Frame = -2 / +1
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQ+ E+++H C ++M + ++ C+PA H +SC+QI+G + ++ L CI
Sbjct: 268 QVQNSEQDEHSCCTRKMYYSTAAISFWCQPASHGGFISCIQIYGHDKRATTTVLESSCIP 447
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVPGIRXXX 616
+ L GF LLG Q Y+MA+Q SQ *+R+T+WF+IG+C *N VP R
Sbjct: 448 AGLLFHFGGFCFLLGPQNFTYKMAVQACSQCSS*IRNTIWFDIGVCASC*NLVPWFRYNY 627
Query: 615 XXXXXXXXSLHPVAVDGVEGFGDS*SSQRLSLPMEPIKFPAAVWRLGLP*LPSPCAVHKV 436
+H +A+D G+ + L +E K VWR P*L S A++KV
Sbjct: 628 WTCHYWASPIHTLAMDEFASVGNCRGTLWL*FSLEHFKAIPVVWRS*FP*LSSSTALYKV 807
Query: 435 REL 427
EL
Sbjct: 808 WEL 816
Score = 122 bits (260), Expect = 7e-027
Identities = 53/130 (40%), Positives = 85/130 (65%)
Frame = +3 / -1
Query: 426 IVP*LCVQHTVMVVMEVRAAIQRQEI*WAPWEVIAAVSFNCLQNPQHHPQPQGEEMRASK 605
++P LC++ ++M++ME+ ++IQR+ +* AP ++I + Q+ Q HP P+ E +R S
Sbjct: 817 VIPRLCIEQSMMIIMEISSSIQRE*L*NAPRKIITTMCLYSFQHSQTHP*PKCE*VRPSN 638
Query: 606 SRTNNWGESQEQNFSWVGIFRC*TKGCGVLMVDAVNVFV*PFRMQCPVPPIEYKILKDKV 785
R+NN E++EQ+FS + I RC TK C V M++ VN+ V PF M V P+E KIL++++
Sbjct: 637 GRSNNCSETKEQDFSRMRILRCQTKWCCVFMMNTVNMLVQPFCM*NSVAPVENKILQNEI 458
Query: 786 EKNLRYNNRP 815
L YN P
Sbjct: 457 TNQLGYNYFP 428
>gb|DR681790.1|DR681790 EST1071865 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA171 3' end, mRNA sequence
Length = 729
Score = 394 bits (854), Expect = e-109
Identities = 147/185 (79%), Positives = 163/185 (88%)
Frame = -3 / +2
Query: 905 YHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKW 726
YH VNLPVM+ SYPAF+FMG+ S LPLP W VVVSQ++ YF+LEDF+FYWGHR LHTKW
Sbjct: 2 YHFGVNLPVMVVSYPAFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFYWGHRILHTKW 181
Query: 725 LYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLET 546
LYKHVHSVHHEYATPFGLTSEYAH AEILFLGFA ++GPA+TGPHLFTLWLWM LRVLET
Sbjct: 182 LYKHVHSVHHEYATPFGLTSEYAHLAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLET 361
Query: 545 VEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKA 366
VEAH GY FPWS S PLYGG+DFHDYHHR+LYTKSGNY+STF YMDWLFGTDK YRK
Sbjct: 362 VEAHCGYDFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYRKL 541
Query: 365 KTIEE 351
K +++
Sbjct: 542 KGLQK 556
Score = 225 bits (486), Expect = 5e-058
Identities = 110/177 (62%), Positives = 117/177 (66%)
Frame = +1 / -1
Query: 364 FALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*AS 543
F+ R LSVPNNQSM* V+ *FPDFV S+R* *SWKS PPY+G F+ L GK *P AS
Sbjct: 543 FSFRYPLSVPNNQSM*VKVDE*FPDFV*SSR***SWKSAPPYNGNSFEMLQGKS*PQCAS 364
Query: 544 TVSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLY 723
TVS T IHS V R*GPV AGP A PRNKISA AYSDVKP GVAYS TL*TCLY
Sbjct: 363 TVSNTRKLIHSQSVNR*GPVMAGPIIVAKPRNKISARCAYSDVKPNGVAYS**TL*TCLY 184
Query: 724 SHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMNLKAGYEKIMTGRFT 894
SHFVC L PQ* KSS Q G G L+ P+NL AGYE MTGR T
Sbjct: 183 SHFVCKILWPQ*KTKSSKMK*QTSWDTTTFQDGSGSTLVMPINLNAGYETTMTGRLT 13
Score = 127 bits (273), Expect = 1e-028
Identities = 57/149 (38%), Positives = 94/149 (63%)
Frame = +3 / -3
Query: 369 LAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAIQRQEI*WAPWEVIAAVSFNC 548
L + + + PVHV++ ++P LC++ ++M++ME+ ++IQR+ +* AP ++I +
Sbjct: 538 LPVPFISPK*PVHVSESR*VIPRLCIEQSMMIIMEISSSIQRE*L*NAPRKIITTMCLYS 359
Query: 549 LQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVGIFRC*TKGCGVLMVDAVNVFV*P 728
Q+ Q HP P+ E +R S R+NN E++EQ+FS + I RC TK C V M++ VN+ V P
Sbjct: 358 FQHSQTHP*PKCE*VRPSNGRSNNCSETKEQDFSKMRILRCQTKWCCVFMMNTVNMLVQP 179
Query: 729 FRMQCPVPPIEYKILKDKVEKNLRYNNRP 815
F M V P+E KI ++++ L YN P
Sbjct: 178 FCM*NSVAPVENKIFQNEITNQLGYNYFP 92
Score = 125 bits (267), Expect = 8e-028
Identities = 61/167 (36%), Positives = 87/167 (52%)
Frame = -2 / +1
Query: 894 CEPACHDFLVSCLQIHGSQELSSFATLVGCCISSSFLLCP*GFYILLGAQGIAYEMAIQT 715
C+PA H +SC+QI+G + ++ L CI + L F LLG Q Y+MA+Q
Sbjct: 13 CQPASHGGFISCIQIYGHDKRATTTVLESSCIPAGLLFHFGRFCFLLGPQNFTYKMAVQA 192
Query: 714 RSQRPP*VRHTLWFNIGICPPS*NFVPGIRXXXXXXXXXXXSLHPVAVDGVEGFGDS*SS 535
SQ *+R+T+WF+IG+C *N VP R +H +A+D G+ +
Sbjct: 193 CSQCSS*IRNTIWFDIGVCASC*NLVPWFRYNYWTCHYWASPIHTLAMDEFASVGNCRGT 372
Query: 534 QRLSLPMEPIKFPAAVWRLGLP*LPSPCAVHKVRELCLNICLHGLVV 394
L +E K VWR P*L S A++KV EL ++ LHGLV+
Sbjct: 373 LWL*FSLEHFKAIPVVWRS*FP*LSSSTALYKVWELLIDFHLHGLVI 513
>gb|DT634061.1|DT634061 EST1148992 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG181 3' end, mRNA sequence
Length = 891
Score = 371 bits (804), Expect(2) = e-107
Identities = 141/194 (72%), Positives = 165/194 (85%)
Frame = -3 / +3
Query: 1115 IDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTSAY 936
++ W LI NFT+FQLA++ +FLLHE++FFL GLP +L E GL +KYKIQ K+NT A
Sbjct: 258 LERGWLYLITNFTDFQLASIGSFLLHESIFFLFGLPFILLETTGLLSKYKIQSKTNTVAA 437
Query: 935 QNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFY 756
Q +C+ RL+LYH VNLPVM+ SYP F+FMG+ S LPLP W VVVSQ++ YF+LEDF+FY
Sbjct: 438 QEKCITRLLLYHFGVNLPVMVVSYPVFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFY 617
Query: 755 WGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLW 576
WGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA ++GPA+TGPHLFTLW
Sbjct: 618 WGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLW 797
Query: 575 LWMVLRVLETVEAH 534
LWM LRVLETVEAH
Sbjct: 798 LWMSLRVLETVEAH 839
Score = 186 bits (401), Expect(2) = 4e-048
Identities = 97/186 (52%), Positives = 104/186 (55%)
Frame = +1 / -3
Query: 538 ASTVSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TC 717
ASTVS T IHS V R*GPV AGP A PRNKISAG AYSDVKP GVAYS TL*TC
Sbjct: 835 ASTVSNTRKLIHSQSVNR*GPVMAGPIIVAKPRNKISAGCAYSDVKPNGVAYS**TL*TC 656
Query: 718 LYSHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMNLKAGYEKIMTGRFTH 897
LYSHFVC L PQ* KSS Q G G L+ P+NL GYE MTGR T
Sbjct: 655 LYSHFVCKILWPQ*KTKSSKMK*QTSWDTTTFQDGSGSTLVMPINLNTGYETTMTGRLTP 476
Query: 898 TW*RMRRKTHLFW*AEVLLFFWILYLAKSPKRSKRREGRPERKKTVSWSRKVTTVASWNS 1077
R H A V + ILYL P S +G P +KK +S RK+ AS S
Sbjct: 475 K*YSSSRVIHFSCAATVFVLL*ILYLLNKPVVSSNMKGSPNKKKMLS*RRKLPMEAS*KS 296
Query: 1078 VKLAIR 1095
VK IR
Sbjct: 295 VKFVIR 278
Score = 114 bits (244), Expect = 1e-024
Identities = 49/143 (34%), Positives = 77/143 (53%)
Frame = -2 / +2
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQ+ E+++H C ++M + ++ C+PA H +SC+QI+G + ++ L CI
Sbjct: 398 QVQNSEQDEHSCCTRKMYYSTAAISFWCQPASHGGFISCIQIYGHDKRATTTVLESSCIP 577
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVPGIRXXX 616
+ L GF LLG Q Y+MA+Q SQ *+R+T+WF+IG+C *N VP R
Sbjct: 578 AGLLFHFGGFCFLLGPQNFTYKMAVQACSQCSS*IRNTIWFDIGVCASC*NLVPWFRYNY 757
Query: 615 XXXXXXXXSLHPVAVDGVEGFGD 547
+H +A+D G+
Sbjct: 758 WTCHYWASPIHTLAMDEFASVGN 826
Score = 40.0 bits (81), Expect(2) = e-107
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -3 / +2
Query: 479 SDFHDYHHRVLYTKS 435
+DFHDYHHR+LYTKS
Sbjct: 845 ADFHDYHHRLLYTKS 889
Score = 26.3 bits (51), Expect(2) = 4e-048
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -1
Query: 433 PDFVYSTR*W*SWKS 477
PDFV S+R* *SWKS
Sbjct: 891 PDFV*SSR***SWKS 847
>gb|DR685372.1|DR685372 EST1075449 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB310 3' end, mRNA sequence
Length = 635
Score = 389 bits (844), Expect = e-107
Identities = 148/204 (72%), Positives = 172/204 (84%)
Frame = -3 / +1
Query: 1115 IDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTSAY 936
++ W LI NFT+FQLA++ +FLLHE++FFLSGLP +L E GL +KYKIQ K+NT A
Sbjct: 13 LERCWLYLITNFTDFQLASIGSFLLHESIFFLSGLPFILLETTGLLSKYKIQSKTNTVAA 192
Query: 935 QNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFY 756
Q +C+ RL+LYH VNLPVM+ SYP F+FMG+ S LPLP W VVVSQ++ YF+LEDF+FY
Sbjct: 193 QEKCITRLLLYHFGVNLPVMVVSYPVFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFY 372
Query: 755 WGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLW 576
WGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA ++GPA+ GPHLFTLW
Sbjct: 373 WGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAIIGPHLFTLW 552
Query: 575 LWMVLRVLETVEAHSGYHFPWSPS 504
LWM LRVLETVEAH GY FPWS S
Sbjct: 553 LWMSLRVLETVEAHCGYDFPWSIS 624
Score = 198 bits (426), Expect = 9e-050
Identities = 103/201 (51%), Positives = 113/201 (56%)
Frame = +1 / -1
Query: 493 GRKFDGLHGK**PL*ASTVSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDV 672
G F+ L GK *P ASTVS T IHS V R*GP+ AGP A PRNKISAG AYSDV
Sbjct: 635 GNSFEMLQGKS*PQCASTVSNTRKLIHSQSVNR*GPIMAGPIIVAKPRNKISAGCAYSDV 456
Query: 673 KPKGVAYSWWTL*TCLYSHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMN 852
KP GVAYS TL*TCLYSHFVC L PQ* KSS Q G G L+ P+N
Sbjct: 455 KPNGVAYS**TL*TCLYSHFVCKILWPQ*KTKSSKMK*QTSWDTTTFQDGSGSTLVMPIN 276
Query: 853 LKAGYEKIMTGRFTHTW*RMRRKTHLFW*AEVLLFFWILYLAKSPKRSKRREGRPERKKT 1032
L GYE MTGR T R H A V + ILYL P S +G P++KK
Sbjct: 275 LNTGYETTMTGRLTPK*YSSSRVIHFSCAATVFVLL*ILYLLNKPVVSSNMKGSPDKKKM 96
Query: 1033 VSWSRKVTTVASWNSVKLAIR 1095
+S RK+ AS SVK IR
Sbjct: 95 LS*RRKLPMEAS*KSVKFVIR 33
Score = 114 bits (244), Expect = 1e-024
Identities = 49/143 (34%), Positives = 77/143 (53%)
Frame = -2 / +3
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQ+ E+++H C ++M + ++ C+PA H +SC+QI+G + ++ L CI
Sbjct: 153 QVQNSEQDEHSCCTRKMYYSTAAISFWCQPASHGGFISCIQIYGHDKRATTTVLESSCIP 332
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVPGIRXXX 616
+ L GF LLG Q Y+MA+Q SQ *+R+T+WF+IG+C *N VP R
Sbjct: 333 AGLLFHFGGFCFLLGPQNFTYKMAVQACSQCSS*IRNTIWFDIGVCASC*NLVPWFRYNY 512
Query: 615 XXXXXXXXSLHPVAVDGVEGFGD 547
+H +A+D G+
Sbjct: 513 WTCHYWASPIHTLAMDEFASVGN 581
>gb|DR079207.1|DR079207 RTFEPL1_9_F09.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_F09_A029 5', mRNA sequence
Length = 804
Score = 387 bits (840), Expect = e-107
Identities = 143/180 (79%), Positives = 160/180 (88%)
Frame = -3 / +1
Query: 890 NLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHV 711
+LPVM+ SYP F+FMG+ S LPLP W VVVSQ++ YF+LEDF+FYWGHR LHTKWLYKHV
Sbjct: 10 HLPVMVVSYPVFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFYWGHRILHTKWLYKHV 189
Query: 710 HSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHS 531
HSVHHEYATPFGLTSEYAHPAEILFLGFA ++GPA+TGPHLFTLWLWM LRVLETVEAH
Sbjct: 190 HSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLETVEAHC 369
Query: 530 GYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEE 351
GY FPWS S PLYGG+DFHDYHHR+LYTKSGNY+STF YMDWLFGTDK YRK K +++
Sbjct: 370 GYDFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYRKLKGLQK 549
Score = 230 bits (497), Expect = 2e-059
Identities = 111/175 (63%), Positives = 118/175 (67%)
Frame = +1 / -2
Query: 364 FALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*AS 543
F+ R LSVPNNQSM* V+ *FPDFV S+R* *SWKS PPY+G F+ L GK *P AS
Sbjct: 536 FSFRYPLSVPNNQSM*VKVDE*FPDFV*SSR***SWKSAPPYNGNSFEMLQGKS*PQCAS 357
Query: 544 TVSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLY 723
TVS T IHS V R*GPV AGP ANPRNKISAG AYSDVKP GVAYS TL*TCLY
Sbjct: 356 TVSNTRKLIHSQSVNR*GPVMAGPIIVANPRNKISAGCAYSDVKPNGVAYS**TL*TCLY 177
Query: 724 SHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMNLKAGYEKIMTGR 888
SHFVC L PQ* KSS Q G GR L+ P+NL GYE MTGR
Sbjct: 176 SHFVCKILWPQ*KTKSSKMK*QTSWDTTTFQDGSGRTLVMPINLNTGYETTMTGR 12
Score = 131 bits (280), Expect = 1e-029
Identities = 59/149 (39%), Positives = 95/149 (63%)
Frame = +3 / -1
Query: 369 LAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAIQRQEI*WAPWEVIAAVSFNC 548
L + + + PVHV++ ++P LC++ ++M++ME+ ++IQR+ +* AP ++I +
Sbjct: 531 LPVPFISPK*PVHVSESR*VIPRLCIEQSMMIIMEISSSIQRE*L*NAPRKIITTMCLYS 352
Query: 549 LQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVGIFRC*TKGCGVLMVDAVNVFV*P 728
Q+ Q HP P+ E +R S R+NN ES+EQ+FS + I RC TK C V M++ VN+ V P
Sbjct: 351 FQHSQTHP*PKCE*VRPSNGRSNNCSESKEQDFSRMRILRCQTKWCCVFMMNTVNMLVQP 172
Query: 729 FRMQCPVPPIEYKILKDKVEKNLRYNNRP 815
F M V P+E KIL++++ L YN P
Sbjct: 171 FCM*NSVAPVENKILQNEITNQLGYNYFP 85
Score = 127 bits (272), Expect = 2e-028
Identities = 63/168 (37%), Positives = 88/168 (52%)
Frame = -2 / +3
Query: 897 MCEPACHDFLVSCLQIHGSQELSSFATLVGCCISSSFLLCP*GFYILLGAQGIAYEMAIQ 718
+ PA H +SC+QI+G + S+ L CI + L GF LLG Q Y+MA+Q
Sbjct: 3 LVSPASHGGFISCIQIYGHDKRSTTTVLESSCIPAGLLFHFGGFCFLLGPQNFTYKMAVQ 182
Query: 717 TRSQRPP*VRHTLWFNIGICPPS*NFVPGIRXXXXXXXXXXXSLHPVAVDGVEGFGDS*S 538
SQ *+R+T+WF+IG+C *N VP IR +H +A+D G+
Sbjct: 183 ACSQCSS*IRNTIWFDIGVCASC*NLVPWIRYNYWTCHYWASPIHTLAMDEFASVGNCRG 362
Query: 537 SQRLSLPMEPIKFPAAVWRLGLP*LPSPCAVHKVRELCLNICLHGLVV 394
+ L +E K VWR P*L S A++KV EL ++ LHGLV+
Sbjct: 363 TLWL*FSLEHFKAIPVVWRS*FP*LSSSTALYKVWELLIDFHLHGLVI 506
>gb|DR179202.1|DR179202 RTMNUT1_16_D10.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_D10_A029 5', mRNA sequence
Length = 761
Score = 387 bits (840), Expect = e-107
Identities = 143/180 (79%), Positives = 160/180 (88%)
Frame = -3 / +3
Query: 890 NLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHV 711
+LPVM+ SYP F+FMG+ S LPLP W VVVSQ++ YF+LEDF+FYWGHR LHTKWLYKHV
Sbjct: 12 HLPVMVVSYPVFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFYWGHRILHTKWLYKHV 191
Query: 710 HSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHS 531
HSVHHEYATPFGLTSEYAHPAEILFLGFA ++GPA+TGPHLFTLWLWM LRVLETVEAH
Sbjct: 192 HSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLETVEAHC 371
Query: 530 GYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEE 351
GY FPWS S PLYGG+DFHDYHHR+LYTKSGNY+STF YMDWLFGTDK YRK K +++
Sbjct: 372 GYDFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYRKLKGLQK 551
Score = 225 bits (485), Expect = 7e-058
Identities = 109/175 (62%), Positives = 116/175 (66%)
Frame = +1 / -2
Query: 364 FALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*AS 543
F+ R LSVPNNQSM* V+ *FPDFV S+R* *SWKS PPY+G F+ L GK *P AS
Sbjct: 538 FSFRYPLSVPNNQSM*VKVDE*FPDFV*SSR***SWKSAPPYNGNSFEMLQGKS*PQCAS 359
Query: 544 TVSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLY 723
TVS T IHS V R*GPV AGP A PRNKISAG AYSDVKP GVAYS TL*TCLY
Sbjct: 358 TVSNTRKLIHSQSVNR*GPVMAGPIIVAKPRNKISAGCAYSDVKPNGVAYS**TL*TCLY 179
Query: 724 SHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMNLKAGYEKIMTGR 888
SHFVC L PQ* KSS Q G G L+ P+NL GYE MTGR
Sbjct: 178 SHFVCKILWPQ*KTKSSKMK*QTSWDTTTFQDGSGSTLVMPINLNTGYETTMTGR 14
Score = 129 bits (277), Expect = 3e-029
Identities = 58/149 (38%), Positives = 95/149 (63%)
Frame = +3 / -1
Query: 369 LAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAIQRQEI*WAPWEVIAAVSFNC 548
L + + + PVHV++ ++P LC++ ++M++ME+ ++IQR+ +* AP ++I +
Sbjct: 533 LPVPFISPK*PVHVSESR*VIPRLCIEQSMMIIMEISSSIQRE*L*NAPRKIITTMCLYS 354
Query: 549 LQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVGIFRC*TKGCGVLMVDAVNVFV*P 728
Q+ Q HP P+ E +R S R+NN E++EQ+FS + I RC TK C V M++ VN+ V P
Sbjct: 353 FQHSQTHP*PKCE*VRPSNGRSNNCSETKEQDFSRMRILRCQTKWCCVFMMNTVNMLVQP 174
Query: 729 FRMQCPVPPIEYKILKDKVEKNLRYNNRP 815
F M V P+E KIL++++ L YN P
Sbjct: 173 FCM*NSVAPVENKILQNEITNQLGYNYFP 87
Score = 124 bits (265), Expect = 2e-027
Identities = 61/168 (36%), Positives = 87/168 (51%)
Frame = -2 / +2
Query: 897 MCEPACHDFLVSCLQIHGSQELSSFATLVGCCISSSFLLCP*GFYILLGAQGIAYEMAIQ 718
+ PA H +SC+QI+G + ++ L CI + L GF LLG Q Y+MA+Q
Sbjct: 5 LVSPASHGGFISCIQIYGHDKRATTTVLESSCIPAGLLFHFGGFCFLLGPQNFTYKMAVQ 184
Query: 717 TRSQRPP*VRHTLWFNIGICPPS*NFVPGIRXXXXXXXXXXXSLHPVAVDGVEGFGDS*S 538
SQ *+R+T+WF+IG+C *N VP R +H +A+D G+
Sbjct: 185 ACSQCSS*IRNTIWFDIGVCASC*NLVPWFRYNYWTCHYWASPIHTLAMDEFASVGNCRG 364
Query: 537 SQRLSLPMEPIKFPAAVWRLGLP*LPSPCAVHKVRELCLNICLHGLVV 394
+ L +E K VWR P*L S A++KV EL ++ LHGLV+
Sbjct: 365 TLWL*FSLEHFKAIPVVWRS*FP*LSSSTALYKVWELLIDFHLHGLVI 508
>gb|DR120277.1|DR120277 RTMG1_28_D11.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_28_D11_A029 5', mRNA sequence
Length = 519
Score = 370 bits (803), Expect = e-102
Identities = 138/172 (80%), Positives = 151/172 (87%)
Frame = -3 / +2
Query: 878 MIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVH 699
M+ SYP F+FMG+ S LPLP W VVVSQ++ YF+LEDF+FYWGHR LHTKWLYKHVHSVH
Sbjct: 2 MVVSYPVFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFYWGHRILHTKWLYKHVHSVH 181
Query: 698 HEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHF 519
HEYATPFGLTSEYAHPAEILFLGFA ++GPA+TGPHLFTLWLWM LRVLETVEAH GY F
Sbjct: 182 HEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLETVEAHCGYDF 361
Query: 518 PWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAK 363
PWS S PLYGG+DF YHHR+LYTKSGNY+STF YMDWLFGTDK YRK K
Sbjct: 362 PWSISKLFPLYGGADFFFYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYRKLK 517
Score = 209 bits (451), Expect = 3e-053
Identities = 104/172 (60%), Positives = 111/172 (64%)
Frame = +1 / -1
Query: 364 FALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*AS 543
F+ R LSVPNNQSM* V+ *FPDFV S+R* * KS PPY+G F+ L GK *P AS
Sbjct: 516 FSFRYPLSVPNNQSM*VKVDE*FPDFV*SSR***KKKSAPPYNGNSFEMLQGKS*PQCAS 337
Query: 544 TVSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLY 723
TVS T IHS V R*GPV AGP A PRNKISAG AYSDVKP GVAYS TL*TCLY
Sbjct: 336 TVSNTRKLIHSQSVNR*GPVMAGPIIVAKPRNKISAGCAYSDVKPNGVAYS**TL*TCLY 157
Query: 724 SHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMNLKAGYEKIM 879
SHFVC L PQ* KSS Q G G L+ P+NL GYE M
Sbjct: 156 SHFVCKILWPQ*KTKSSKMK*QTSWDTTTFQDGSGSTLVMPINLNTGYETTM 1
Score = 122 bits (261), Expect = 5e-027
Identities = 55/149 (36%), Positives = 93/149 (62%)
Frame = +3 / -3
Query: 369 LAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAIQRQEI*WAPWEVIAAVSFNC 548
L + + + P+HV++ ++P LC++ ++M+ ++ ++IQR+ +* AP ++I +
Sbjct: 511 LPVPFISPK*PIHVSESR*VIPRLCIEQSMMIKKKISSSIQRE*L*NAPRKIITTMCLYS 332
Query: 549 LQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVGIFRC*TKGCGVLMVDAVNVFV*P 728
Q+ Q HP P+ E +R S R+NN E++EQ+FS + I RC TK C V M++ VN+ V P
Sbjct: 331 FQHSQTHP*PKCE*VRPSNGRSNNCSETKEQDFSRMRILRCQTKWCCVFMMNTVNMLVQP 152
Query: 729 FRMQCPVPPIEYKILKDKVEKNLRYNNRP 815
F M V P+E KIL++++ L YN P
Sbjct: 151 FCM*NSVAPVENKILQNEITNQLGYNYFP 65
Score = 111 bits (238), Expect = 8e-024
Identities = 57/162 (35%), Positives = 82/162 (50%)
Frame = -2 / +1
Query: 879 HDFLVSCLQIHGSQELSSFATLVGCCISSSFLLCP*GFYILLGAQGIAYEMAIQTRSQRP 700
H +SC+QI+G + ++ L CI + L GF LLG Q Y+MA+Q SQ
Sbjct: 1 HGGFISCIQIYGHDKRATTTVLESSCIPAGLLFHFGGFCFLLGPQNFTYKMAVQACSQCS 180
Query: 699 P*VRHTLWFNIGICPPS*NFVPGIRXXXXXXXXXXXSLHPVAVDGVEGFGDS*SSQRLSL 520
*+R+T+WF+IG+C *N VP R +H +A+D G+ + L
Sbjct: 181 S*IRNTIWFDIGVCASC*NLVPWFRYNYWTCHYWASPIHTLAMDEFASVGNCRGTLWL*F 360
Query: 519 PMEPIKFPAAVWRLGLP*LPSPCAVHKVRELCLNICLHGLVV 394
+E K VWR L S A++KV EL ++ LHGLV+
Sbjct: 361 SLEHFKAIPVVWRS*FFFLSSSTALYKVWELLIDFHLHGLVI 486
>gb|DT638744.1|DT638744 EST1153675 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHI95 3' end, mRNA sequence
Length = 814
Score = 356 bits (771), Expect = 2e-097
Identities = 134/186 (72%), Positives = 158/186 (84%)
Frame = -3 / +2
Query: 1115 IDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTSAY 936
++ W LI NFT+FQLA++ +FLLHE++FFLSGLP +L E GL +KYKIQ K+NT A
Sbjct: 257 LERGWLYLITNFTDFQLASIGSFLLHESIFFLSGLPFILLETTGLLSKYKIQSKTNTVAA 436
Query: 935 QNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFY 756
Q +C+ RL+LYH VNLPVM+ SYP F+FMG+ S LPLP W VVVSQ++ YF+LEDF+FY
Sbjct: 437 QEKCITRLLLYHFGVNLPVMVVSYPVFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFY 616
Query: 755 WGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLW 576
WGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA ++GPA+TGPHLFTLW
Sbjct: 617 WGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLW 796
Query: 575 LWMVLR 558
LWM LR
Sbjct: 797 LWMSLR 814
Score = 182 bits (392), Expect = 5e-045
Identities = 93/176 (52%), Positives = 101/176 (57%)
Frame = +1 / -2
Query: 568 IHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLYSHFVCNAL 747
IHS V R*GPV AGP ANPRNKISAG AYSDVKP GVAYS TL*TCLYSHFVC L
Sbjct: 804 IHSQSVNR*GPVMAGPIIVANPRNKISAGCAYSDVKPNGVAYS**TL*TCLYSHFVCKIL 625
Query: 748 CPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMNLKAGYEKIMTGRFTHTW*RMRRKTH 927
PQ* KSS Q G GR L+ P+NL GYE MTGR T R H
Sbjct: 624 WPQ*KTKSSKMK*QTSWDTTTFQDGSGRTLVMPINLNTGYETTMTGRLTPK*YSSSRVIH 445
Query: 928 LFW*AEVLLFFWILYLAKSPKRSKRREGRPERKKTVSWSRKVTTVASWNSVKLAIR 1095
A V + ILYL P S +G P++KK +S RK+ AS SVK IR
Sbjct: 444 FSCAATVFVLL*ILYLLNKPVVSSNMKGSPDKKKMLS*RRKLPMEAS*KSVKFVIR 277
Score = 116 bits (249), Expect = 2e-025
Identities = 50/136 (36%), Positives = 76/136 (55%)
Frame = -2 / +1
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQ+ E+++H C ++M + ++ C+PA H +SC+QI+G + S+ L CI
Sbjct: 397 QVQNSEQDEHSCCTRKMYYSTAAISFWCQPASHGGFISCIQIYGHDKRSTTTVLESSCIP 576
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVPGIRXXX 616
+ L GF LLG Q Y+MA+Q SQ *+R+T+WF+IG+C *N VP IR
Sbjct: 577 AGLLFHFGGFCFLLGPQNFTYKMAVQACSQCSS*IRNTIWFDIGVCASC*NLVPWIRYNY 756
Query: 615 XXXXXXXXSLHPVAVD 568
+H +A+D
Sbjct: 757 WTCHYWASPIHTLAMD 804
>gb|DR687475.1|DR687475 EST1077557 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABS95 3' end, mRNA sequence
Length = 799
Score = 350 bits (758), Expect = 2e-095
Identities = 131/183 (71%), Positives = 155/183 (84%)
Frame = -3 / +1
Query: 1115 IDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTSAY 936
++ W LI NFT+FQLA++ +FLLHE++FFL GLP +L E GL +KYKIQ K+NT A
Sbjct: 250 LERGWLYLITNFTDFQLASIGSFLLHESIFFLFGLPFILLETTGLLSKYKIQSKTNTVAA 429
Query: 935 QNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFY 756
Q +C+ RL+LYH VNLPVM+ SYP F+FMG+ S LPLP W VVVSQ++ YF+LEDF+FY
Sbjct: 430 QEKCITRLLLYHFGVNLPVMVVSYPVFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFY 609
Query: 755 WGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLW 576
WGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA ++GPA+TGPHLFTLW
Sbjct: 610 WGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLW 789
Query: 575 LWM 567
LWM
Sbjct: 790 LWM 798
Score = 176 bits (378), Expect = 4e-043
Identities = 91/176 (51%), Positives = 98/176 (55%)
Frame = +1 / -3
Query: 568 IHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLYSHFVCNAL 747
IHS V R*GPV AGP A PRNKISAG AYSDVKP GVAYS TL*TCLYSHFVC L
Sbjct: 797 IHSQSVNR*GPVMAGPIIVAKPRNKISAGCAYSDVKPNGVAYS**TL*TCLYSHFVCKIL 618
Query: 748 CPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMNLKAGYEKIMTGRFTHTW*RMRRKTH 927
PQ* KSS Q G G L+ P+NL GYE MTGR T R H
Sbjct: 617 WPQ*KTKSSKMK*QTSWDTTTFQDGSGSTLVMPINLNTGYETTMTGRLTPK*YSSSRVIH 438
Query: 928 LFW*AEVLLFFWILYLAKSPKRSKRREGRPERKKTVSWSRKVTTVASWNSVKLAIR 1095
A V + ILYL P S +G P +KK +S RK+ AS SVK IR
Sbjct: 437 FSCAATVFVLL*ILYLLNKPVVSSNMKGSPNKKKMLS*RRKLPMEAS*KSVKFVIR 270
Score = 113 bits (242), Expect = 2e-024
Identities = 48/136 (35%), Positives = 75/136 (55%)
Frame = -2 / +3
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQ+ E+++H C ++M + ++ C+PA H +SC+QI+G + ++ L CI
Sbjct: 390 QVQNSEQDEHSCCTRKMYYSTAAISFWCQPASHGGFISCIQIYGHDKRATTTVLESSCIP 569
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVPGIRXXX 616
+ L GF LLG Q Y+MA+Q SQ *+R+T+WF+IG+C *N VP R
Sbjct: 570 AGLLFHFGGFCFLLGPQNFTYKMAVQACSQCSS*IRNTIWFDIGVCASC*NLVPWFRYNY 749
Query: 615 XXXXXXXXSLHPVAVD 568
+H +A+D
Sbjct: 750 WTCHYWASPIHTLAMD 797
>gb|DR694609.1|DR694609 EST1084701 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEE61 3' end, mRNA sequence
Length = 743
Score = 307 bits (664), Expect = 1e-082
Identities = 117/164 (71%), Positives = 138/164 (84%)
Frame = -3 / +3
Query: 1115 IDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTSAY 936
++ W LI NFT+FQLA++ +FLLHE++FFLSGLP +L E GL +KYKIQ K+NT A
Sbjct: 249 LERGWLYLITNFTDFQLASIGSFLLHESIFFLSGLPFILLETTGLLSKYKIQSKTNTVAA 428
Query: 935 QNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFY 756
Q +C+ RL+LYH VNLPVM+ SYP F+FMG+ S LPLP W VVVSQ++ YF+LEDF+FY
Sbjct: 429 QEKCITRLLLYHFGVNLPVMVVSYPVFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFY 608
Query: 755 WGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA 624
WGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA
Sbjct: 609 WGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA 740
Score = 158 bits (339), Expect = 9e-038
Identities = 81/157 (51%), Positives = 89/157 (56%)
Frame = +1 / -2
Query: 625 ANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLYSHFVCNALCPQ*NIKSSXXXXXXXXXX 804
ANPRNKISAG AYSDVKP GVAYS TL*TCLYSHFVC L PQ* KSS
Sbjct: 739 ANPRNKISAGCAYSDVKPNGVAYS**TL*TCLYSHFVCKILWPQ*KTKSSKMK*QTSWDT 560
Query: 805 XXXQCGKGRELLRPMNLKAGYEKIMTGRFTHTW*RMRRKTHLFW*AEVLLFFWILYLAKS 984
Q G GR L+ P+NL GYE MTGR T R H A V + ILYL
Sbjct: 559 TTFQDGSGRTLVMPINLNTGYETTMTGRLTPK*YSSSRVIHFSCAATVFVLL*ILYLLNK 380
Query: 985 PKRSKRREGRPERKKTVSWSRKVTTVASWNSVKLAIR 1095
P S +G P++KK +S RK+ AS SVK IR
Sbjct: 379 PVVSSNMKGSPDKKKMLS*RRKLPMEAS*KSVKFVIR 269
Score = 113 bits (241), Expect = 3e-024
Identities = 47/117 (40%), Positives = 70/117 (59%)
Frame = -2 / +2
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQ+ E+++H C ++M + ++ C+PA H +SC+QI+G + S+ L CI
Sbjct: 389 QVQNSEQDEHSCCTRKMYYSTAAISFWCQPASHGGFISCIQIYGHDKRSTTTVLESSCIP 568
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVPGIR 625
+ L GF LLG Q Y+MA+Q SQ *+R+T+WF+IG+C *N VP IR
Sbjct: 569 AGLLFHFGGFCFLLGPQNFTYKMAVQACSQCSS*IRNTIWFDIGVCASC*NLVPWIR 739
>dbj|BD273073.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 504
Score = 242 bits (523), Expect = 4e-063
Identities = 89/137 (64%), Positives = 112/137 (81%)
Frame = -3 / +3
Query: 1115 IDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTSAY 936
++ W LI NFT+FQLA++ +FLLHE++F+LSGLP +L E GL +KYKIQ K+NT A
Sbjct: 93 VERGWLYLITNFTDFQLASIGSFLLHESIFYLSGLPFILLETTGLLSKYKIQSKTNTVAA 272
Query: 935 QNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFY 756
Q +C+ RL+LYH CVNLPVM+ SYP F+FMG+ S LPLP W VVVSQ++ YF+LEDF+FY
Sbjct: 273 QEKCITRLLLYHFCVNLPVMVVSYPVFRFMGMTSVLPLPSWKVVVSQLVCYFILEDFVFY 452
Query: 755 WGHRALHTKWLYKHVHS 705
WGHR LH+KWLYKHVHS
Sbjct: 453 WGHRILHSKWLYKHVHS 503
>gb|CO175416.1|CO175416 NDL1_54_D01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_54_D01_A029 5', mRNA sequence
Length = 709
Score = 233 bits (503), Expect = 2e-060
Identities = 85/188 (45%), Positives = 118/188 (62%)
Frame = -3 / +1
Query: 926 CVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGH 747
C ++ V P+ + SYP K +G+R+ LPLP + +Q+ YF++ED+ YW H
Sbjct: 133 CYKAVLFVFFAVVGPLQLTSYPLIKLVGIRTGLPLPSLWEIFAQLAVYFMVEDYGNYWIH 312
Query: 746 RALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWM 567
R LH KW Y+ +H VHHE+ P G + YAH +E+L LG VGPA+ H+ T W W+
Sbjct: 313 RWLHCKWGYEKIHHVHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWV 492
Query: 566 VLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGT 387
VLR +E +E HSGY FPW+ + +P YGG+++HDYHH V N+AS F Y D+L+GT
Sbjct: 493 VLRQVEAIETHSGYDFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGT 672
Query: 386 DKDYRKAK 363
DK YR K
Sbjct: 673 DKGYRYRK 696
>gb|CV031633.1|CV031633 RTNACL1_2_F07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_2_F07_A029 5', mRNA sequence
Length = 788
Score = 233 bits (503), Expect = 2e-060
Identities = 85/188 (45%), Positives = 118/188 (62%)
Frame = -3 / +2
Query: 926 CVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGH 747
C ++ V P+ + SYP K +G+R+ LPLP + +Q+ YF++ED+ YW H
Sbjct: 116 CYKAVLFVFFAVVGPLQLTSYPLIKLVGIRTGLPLPSLWEIFAQLAVYFMVEDYGNYWIH 295
Query: 746 RALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWM 567
R LH KW Y+ +H VHHE+ P G + YAH +E+L LG VGPA+ H+ T W W+
Sbjct: 296 RWLHCKWGYEKIHHVHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWV 475
Query: 566 VLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGT 387
VLR +E +E HSGY FPW+ + +P YGG+++HDYHH V N+AS F Y D+L+GT
Sbjct: 476 VLRQVEAIETHSGYDFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGT 655
Query: 386 DKDYRKAK 363
DK YR K
Sbjct: 656 DKGYRYRK 679
>gb|DR093044.1|DR093044 STRR1_5_E03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_E03_A033 5', mRNA sequence
Length = 894
Score = 233 bits (503), Expect = 2e-060
Identities = 85/188 (45%), Positives = 118/188 (62%)
Frame = -3 / +2
Query: 926 CVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGH 747
C ++ V P+ + SYP K +G+R+ LPLP + +Q+ YF++ED+ YW H
Sbjct: 290 CYKAVLFVFFAVVGPLQLTSYPLIKLVGIRTGLPLPSLWEIFAQLAVYFMVEDYGNYWIH 469
Query: 746 RALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWM 567
R LH KW Y+ +H VHHE+ P G + YAH +E+L LG VGPA+ H+ T W W+
Sbjct: 470 RWLHCKWGYEKIHHVHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWV 649
Query: 566 VLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGT 387
VLR +E +E HSGY FPW+ + +P YGG+++HDYHH V N+AS F Y D+L+GT
Sbjct: 650 VLRQVEAIETHSGYDFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGT 829
Query: 386 DKDYRKAK 363
DK YR K
Sbjct: 830 DKGYRYRK 853
>gb|CF663414.1|CF663414 RTCNT1_2_E05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_2_E05_A029 5', mRNA sequence
Length = 790
Score = 232 bits (501), Expect = 4e-060
Identities = 84/185 (45%), Positives = 117/185 (63%)
Frame = -3 / +1
Query: 926 CVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGH 747
C ++ V P+ + SYP K +G+R+ LPLP + +Q+ YF++ED+ YW H
Sbjct: 235 CYKAVLFVFFAVVGPLQLTSYPLIKLVGIRTGLPLPSLWEIFAQLAVYFMVEDYGNYWIH 414
Query: 746 RALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWM 567
R LH KW Y+ +H VHHE+ P G + YAH +E+L LG VGPA+ H+ T W W+
Sbjct: 415 RWLHCKWGYEKIHHVHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWV 594
Query: 566 VLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGT 387
VLR +E +E HSGY FPW+ + +P YGG+++HDYHH V N+AS F Y D+L+GT
Sbjct: 595 VLRQVEAIETHSGYDFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGT 774
Query: 386 DKDYR 372
DK YR
Sbjct: 775 DKGYR 789
>dbj|BD273071.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 631
Score = 232 bits (500), Expect = 6e-060
Identities = 83/174 (47%), Positives = 114/174 (65%)
Frame = -3 / +1
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P+ + SYP K +G+R+ LPLP + +Q+ YF++ED+ YW HR LH KW Y+ +H
Sbjct: 16 PLQLTSYPLIKLVGIRTGLPLPSLWEIFAQLAVYFMVEDYGNYWIHRWLHCKWGYEKIHH 195
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGY 525
VHHE+ P G + YAH +E+L LG VGPA+ H+ T W W+VLR +E +E HSGY
Sbjct: 196 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWCWVVLRQVEAIETHSGY 375
Query: 524 HFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAK 363
FPW+ + +P YGG+++HDYHH V N+AS F Y D+L+GTDK YR K
Sbjct: 376 DFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRK 537
>gb|DR079131.1|DR079131 RTFEPL1_9_F09.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_F09_A029 3', mRNA sequence
Length = 812
Score = 231 bits (499), Expect = 8e-060
Identities = 86/107 (80%), Positives = 95/107 (88%)
Frame = -3 / +2
Query: 671 TSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLP 492
TSEYAHPAEILFLGFA ++GPA+TGPHLFTLWLWM LRVLETVEAH GY FPWS S P
Sbjct: 2 TSEYAHPAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLETVEAHCGYDFPWSISKLFP 181
Query: 491 LYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEE 351
LYGG+DFHDYHHR+LYTKSGNY+STF YMDWLFGTDK YRK K +++
Sbjct: 182 LYGGADFHDYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYRKLKGLQK 322
Score = 145 bits (311), Expect = 7e-034
Identities = 70/103 (67%), Positives = 75/103 (72%)
Frame = +1 / -3
Query: 364 FALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*AS 543
F+ R LSVPNNQSM* V+ *FPDFV S+R* *SWKS PPY+G F+ L GK *P AS
Sbjct: 309 FSFRYPLSVPNNQSM*VKVDE*FPDFV*SSR***SWKSAPPYNGNSFEMLQGKS*PQCAS 130
Query: 544 TVSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDV 672
TVS T IHS V R*GPV AGP ANPRNKISAG AYSDV
Sbjct: 129 TVSNTRKLIHSQSVNR*GPVMAGPIIVANPRNKISAGCAYSDV 1
>dbj|BD272970.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 474
Score = 199 bits (430), Expect = 3e-050
Identities = 70/153 (45%), Positives = 99/153 (64%)
Frame = -3 / +1
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P+ + SYP K +G+R+ LPLP + +Q+ YF++ED+ YW HR LH KW Y+ +H
Sbjct: 16 PLQLTSYPLIKLVGIRTGLPLPSLWEIFAQLAVYFMVEDYGNYWIHRWLHCKWGYEKIHH 195
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGY 525
VHHE+ P G + YAH +E+L LG VGPA+ H+ T W W+VLR +E +E HSGY
Sbjct: 196 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWCWVVLRQVEAIETHSGY 375
Query: 524 HFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNY 426
FPW+ + +P YGG+++HDYHH V N+
Sbjct: 376 DFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNF 474
>gb|DT634318.1|DT634318 EST1149249 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG467 3' end, mRNA sequence
Length = 804
Score = 193 bits (417), Expect = 2e-048
Identities = 68/157 (43%), Positives = 99/157 (63%)
Frame = -3 / +1
Query: 926 CVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGH 747
C ++ V P+ + SYP K +G+R+ LPLP + +Q+ +F++ED+ YW H
Sbjct: 331 CYKAVLFVFFAVVGPLQLTSYPLIKLVGIRTGLPLPSLWEIFAQLAVHFMVEDYGNYWIH 510
Query: 746 RALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWM 567
R LH KW Y+ +H VHHE+ P G + YAH +E+L LG VGPA+ H+ T W W+
Sbjct: 511 RWLHCKWGYEKIHHVHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWV 690
Query: 566 VLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHH 456
VLR +E +E HSGY FPW+ + +P YG +++HDYHH
Sbjct: 691 VLRQVEAIETHSGYDFPWTLTKLIPFYGRAEYHDYHH 801
>gb|DR693137.1|DR693137 EST1083225 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADV18 3' end, mRNA sequence
Length = 785
Score = 189 bits (407), Expect = 4e-047
Identities = 67/154 (43%), Positives = 97/154 (62%)
Frame = -3 / +2
Query: 926 CVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGH 747
C ++ V P+ + SYP K +G+R+ LPLP + +Q+ YF++ED+ YW H
Sbjct: 323 CYKAVLFVFFAVVGPLQLTSYPLIKLVGIRTGLPLPSLWEIFAQLAVYFMVEDYGNYWIH 502
Query: 746 RALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWM 567
R LH KW Y+ +H VHHE+ P G + YAH +E+L LG VGPA+ H+ T W W+
Sbjct: 503 RWLHCKWGYEKIHHVHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWV 682
Query: 566 VLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHD 465
VLR +E +E HSGY FPW+ + +P YGG+++HD
Sbjct: 683 VLRQVEAIETHSGYDFPWTLTKLIPFYGGAEYHD 784
>gb|DR118494.1|DR118494 RTMG1_17_H05.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_H05_A029 3', mRNA sequence
Length = 814
Score = 188 bits (406), Expect = 5e-047
Identities = 66/131 (50%), Positives = 86/131 (65%)
Frame = -3 / +3
Query: 755 WGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLW 576
W HR LH KW Y+ +H VHHE+ P G + YAH +E+L LG VGPA+ H+ T W
Sbjct: 3 WIHRWLHCKWGYEKIHHVHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFW 182
Query: 575 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWL 396
W+VLR +E +E HSGY FPW+ + +P YGG+++HDYHH V N+AS F Y D+L
Sbjct: 183 FWVVLRQVEAIETHSGYDFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYL 362
Query: 395 FGTDKDYRKAK 363
+GTDK YR K
Sbjct: 363 YGTDKGYRYRK 395
>dbj|BD273072.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 362
Score = 180 bits (387), Expect = 2e-044
Identities = 66/83 (79%), Positives = 72/83 (86%)
Frame = -3 / +2
Query: 599 GPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYAS 420
GPHLFTLWLWM LRVLETVEAH GY FPWS S PLYGG+DFHDYHHR+LYTKSGNY+S
Sbjct: 2 GPHLFTLWLWMSLRVLETVEAHCGYDFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSS 181
Query: 419 TFVYMDWLFGTDKDYRKAKTIEE 351
TF YMDWLFGTDK YRK K +++
Sbjct: 182 TFTYMDWLFGTDKGYRKLKGLQK 250
Score = 104 bits (222), Expect = 1e-021
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +1 / -3
Query: 364 FALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*AS 543
F+ R LSVPNNQSM* V+ *FPDFV S+R* *SWKS PPY+G F+ L GK *P AS
Sbjct: 237 FSFRYPLSVPNNQSM*VKVDE*FPDFV*SSR***SWKSAPPYNGNSFEMLQGKS*PQCAS 58
Query: 544 TVSKTLNTIHSHRVKR*GP 600
TVS T IHS V R*GP
Sbjct: 57 TVSNTRKLIHSQSVNR*GP 1
>gb|DR687871.1|DR687871 EST1077954 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABX56 3' end, mRNA sequence
Length = 774
Score = 178 bits (383), Expect = 8e-044
Identities = 64/150 (42%), Positives = 93/150 (62%)
Frame = -3 / +2
Query: 926 CVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGH 747
C ++ V P+ + SYP K +G+R+ LPLP + +Q+ +F++ED+ YW H
Sbjct: 323 CYKAVLFVFFAVVGPLQLTSYPLIKLVGIRTGLPLPSLWEIFAQLAVHFMVEDYGNYWIH 502
Query: 746 RALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWM 567
R LH KW Y+ +H VHHE+ P G + YAH +E+L LG VGPA+ H+ T W W+
Sbjct: 503 RWLHCKWGYEKIHHVHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWV 682
Query: 566 VLRVLETVEAHSGYHFPWSPSNFLPLYGGS 477
VLR +E +E HSGY FPW+ + +P YGG+
Sbjct: 683 VLRQVEAIETHSGYDFPWTLTKLIPFYGGA 772
>gb|DR092962.1|DR092962 STRR1_5_E03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_E03_A033 3', mRNA sequence
Length = 823
Score = 176 bits (378), Expect = 4e-043
Identities = 61/123 (49%), Positives = 81/123 (65%)
Frame = -3 / +1
Query: 731 KWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVL 552
KW Y+ +H VHHE+ P G + YAH +E+L LG VGPA+ H+ T W W+VLR +
Sbjct: 4 KWGYEKIHHVHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQV 183
Query: 551 ETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYR 372
E +E HSGY FPW+ + +P YGG+++HDYHH V N+AS F Y D+L+GTDK YR
Sbjct: 184 EAIETHSGYDFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR 363
Query: 371 KAK 363
K
Sbjct: 364 YRK 372
>gb|DR179128.1|DR179128 RTMNUT1_16_D10.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_D10_A029 3', mRNA sequence
Length = 786
Score = 174 bits (374), Expect = 1e-042
Identities = 64/81 (79%), Positives = 70/81 (86%)
Frame = -3 / +1
Query: 593 HLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTF 414
HLFTLWLWM LRVLETVEAH GY FPWS S PLYGG+DFHDYHHR+LYTKSGNY+STF
Sbjct: 1 HLFTLWLWMSLRVLETVEAHCGYDFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTF 180
Query: 413 VYMDWLFGTDKDYRKAKTIEE 351
YMDWLFGTDK YRK K +++
Sbjct: 181 TYMDWLFGTDKGYRKLKGLQK 243
>gb|DT638113.1|DT638113 EST1153044 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHB28 3' end, mRNA sequence
Length = 836
Score = 168 bits (362), Expect = 6e-041
Identities = 62/146 (42%), Positives = 89/146 (60%)
Frame = -3 / +2
Query: 926 CVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGH 747
C ++ V P+ + SYP K +G+R+ LPLP + +Q+ YF++ED+ YW H
Sbjct: 398 CYKAVLFVFFAVVGPLQLTSYPLIKLVGIRTGLPLPSLWEIFAQLAVYFMVEDYGNYWIH 577
Query: 746 RALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWM 567
R LH KW Y+ +H VHHE+ P G + YAH +E+L LG VGPA+ H+ T W W+
Sbjct: 578 RWLHCKWGYEKIHHVHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWV 757
Query: 566 VLRVLETVEAHSGYHFPWSPSNFLPL 489
VLR +E +E HSGY FPW+ + + L
Sbjct: 758 VLRQVEAIETHSGYDFPWTLTKLILL 835
>gb|CF471332.1|CF471332 RTDS1_2_D06.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_2_D06_A015 5', mRNA sequence
Length = 676
Score = 101 bits (215), Expect(2) = 2e-038
Identities = 39/81 (48%), Positives = 51/81 (62%)
Frame = -3 / +1
Query: 845 GLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTS 666
GL ++ P P + Q+ +FVLED YW HRALH LYK +H +HH+Y+ PFGL +
Sbjct: 1 GLSTTTPFPSLWTMAYQIAIFFVLEDTWHYWSHRALHWGPLYKGIHKIHHQYSAPFGLAA 180
Query: 665 EYAHPAEILFLGFAPVVGPAL 603
EYA P E++ LGF V P L
Sbjct: 181 EYASPIEVMCLGFGTVGCPIL 243
Score = 79.0 bits (166), Expect(2) = 2e-038
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = -3 / +1
Query: 593 HLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHH 456
H+ T++LW+V R+ + ++AHSGY FPWS +FLP + G+D HD HH
Sbjct: 268 HILTMYLWIVFRLFQAIDAHSGYEFPWSLHHFLPFWAGADHHDLHH 405
>gb|AW226167.1|AW226167 ST79B06 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST79B06, mRNA sequence
Length = 390
Score = 150 bits (323), Expect = 2e-035
Identities = 60/103 (58%), Positives = 76/103 (73%)
Frame = -3 / +3
Query: 1115 IDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTSAY 936
++ W LI NFT+FQLA++ +FLLHE++FFLSGLP +L E GL +KYKIQ K+NT A
Sbjct: 72 LERGWLYLITNFTDFQLASIGSFLLHESIFFLSGLPFILLETTGLLSKYKIQSKTNTVAA 251
Query: 935 QNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSV 807
Q +C+ RL+LYH VNLPVM YP F+FMG+ S LPLP V
Sbjct: 252 QEKCITRLLLYHFGVNLPVMXAXYPVFRFMGMTSVLPLPSXXV 380
>gb|CO175343.1|CO175343 NDL1_54_D01.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_54_D01_A029 3', mRNA sequence
Length = 687
Score = 144 bits (308), Expect = 2e-033
Identities = 51/100 (51%), Positives = 67/100 (67%)
Frame = -3 / +1
Query: 662 YAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYG 483
YAH +E+L LG VGPA+ H+ T W W+VLR +E +E HSGY FPW+ + +P YG
Sbjct: 13 YAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGYDFPWTLTKLIPFYG 192
Query: 482 GSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAK 363
G+++HDYHH V N+AS F Y D+L+GTDK YR K
Sbjct: 193 GAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRK 312
>gb|CO366765.1|CO366765 RTK1_29_H12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_29_H12_A029 5', mRNA sequence
Length = 789
Score = 142 bits (305), Expect = 5e-033
Identities = 51/100 (51%), Positives = 66/100 (66%)
Frame = -3 / -2
Query: 662 YAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYG 483
YAH E+L LG VGPA+ H+ T W W+VLR +E +E HSGY FPW+ + +P YG
Sbjct: 779 YAHWFEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGYDFPWTLTKLIPFYG 600
Query: 482 GSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAK 363
G+++HDYHH V N+AS F Y D+L+GTDK YR K
Sbjct: 599 GAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRK 480
>gb|CX647228.1|CX647228 COLD1_14_B03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_14_B03_A029 5', mRNA sequence
Length = 638
Score = 138 bits (297), Expect = 6e-032
Identities = 49/98 (50%), Positives = 65/98 (66%)
Frame = -3 / -2
Query: 656 HPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGS 477
H +E+L LG VGPA+ H+ T W W+VLR +E +E HSGY FPW+ + +P YGG+
Sbjct: 637 HWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGYDFPWTLTKLIPFYGGA 458
Query: 476 DFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAK 363
++HDYHH V N+AS F Y D+L+GTDK YR K
Sbjct: 457 EYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRK 344
>gb|DR118577.1|DR118577 RTMG1_17_H05.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_H05_A029 5', mRNA sequence
Length = 626
Score = 136 bits (291), Expect = 4e-031
Identities = 50/121 (41%), Positives = 72/121 (59%)
Frame = -3 / +2
Query: 926 CVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGH 747
C ++ V P+ + SYP K +G+R+ LPLP + +Q+ YF++ED+ YW H
Sbjct: 263 CYKAVLFVFFAVVGPLQLTSYPLIKLVGIRTGLPLPSLWEIFAQLAVYFMVEDYGNYWIH 442
Query: 746 RALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWM 567
R LH KW Y+ +H VHHE+ P G + YAH +E+L LG VGPA+ H+ T W W+
Sbjct: 443 RWLHCKWGYEKIHHVHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWV 622
Query: 566 V 564
V
Sbjct: 623 V 625
>gb|DR081782.1|DR081782 RTFEPL1_32_F04.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_32_F04_A029 3', mRNA sequence
Length = 705
Score = 127 bits (271), Expect = 2e-028
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = -3 / +1
Query: 530 GYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEE 351
GY FPWS S PLYGG+DFHDYHHR+LYTKSGNY+STF YMDWLFGTDK YRK K +++
Sbjct: 1 GYDFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYRKLKGLQK 180
>gb|DR693249.1|DR693249 EST1083337 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADW75 3' end, mRNA sequence
Length = 750
Score = 123 bits (264), Expect = 2e-027
Identities = 47/115 (40%), Positives = 68/115 (59%)
Frame = -3 / +1
Query: 926 CVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGH 747
C ++ V P+ + SYP K +G+R+ LPLP + +Q+ YF++ED+ YW H
Sbjct: 403 CYKAVLFVFFAVVGPLQLTSYPLIKLVGIRTGLPLPSLWEIFAQLAVYFMVEDYGNYWIH 582
Query: 746 RALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFT 582
R LH KW Y+ +H VHHE+ P G + YAH +E+L LG VGPA+ H+ T
Sbjct: 583 RWLHCKWGYEKIHHVHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMIT 747
>gb|BX682839.1|BX682839 BX682839 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 122E11, mRNA sequence
Length = 648
Score = 105 bits (223), Expect = 9e-022
Identities = 37/47 (78%), Positives = 43/47 (91%)
Frame = -3 / +1
Query: 491 LYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEE 351
LYGG+DFHDYHHR+LYTKSGNY+STF YMDWLFGTDK YRK K +++
Sbjct: 1 LYGGADFHDYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYRKLKGLQK 141
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 697,502,299
Number of Sequences: 355925
Number of extensions: 10535858
Number of successful extensions: 63834
Number of sequences better than 1.0e-020: 38
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 20324613690
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)