TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448387.2.1
(919 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|BD224541.1| Materials and methods for the modification ... 166 8e-059
gb|DR111859.1|DR111859 RTS1_20_F02.g1_A029 Roots minus sulf... 134 8e-046
gb|DR079274.1|DR079274 RTFEPL1_10_F01.b1_A029 Roots plus ad... 129 5e-044
gb|DR017244.1|DR017244 STRS1_15_B04.b1_A034 Shoot tip pitch... 129 5e-044
gb|DR048277.1|DR048277 RTBOR1_7_E05.g2_A029 Roots plus adde... 129 5e-044
gb|CF473581.1|CF473581 RTWW2_3_F07.g1_A021 Well-watered lob... 129 5e-044
dbj|BD224542.1| Materials and methods for the modification ... 131 1e-043
gb|CO367090.1|CO367090 RTK1_32_C09.b1_A029 Roots minus pota... 125 2e-043
gb|DR024373.1|DR024373 STRS1_64_C04.g1_A034 Shoot tip pitch... 141 8e-043
gb|CO201211.1|CO201211 RTCNT2_4_G07.b1_A029 Root control 2 ... 136 2e-041
gb|CF402601.1|CF402601 RTWW1_21_D04.g1_A015 Well-watered lo... 119 5e-041
gb|CO362045.1|CO362045 NDL2_8_G01.g1_A029 Needles control 2... 84 2e-040
gb|CX653107.1|CX653107 COLD1_63_A08.g1_A029 Root cold Pinus... 136 2e-040
gb|U12013.1|PTU12013 Pinus taeda PT4CL2 4-coumarate-CoA lig... 84 3e-040
gb|U12012.1|PTU12012 Pinus taeda PT4CL1 4-coumarate-CoA lig... 84 3e-040
dbj|BD224332.1| Materials and methods for the modification ... 84 3e-040
dbj|BD272988.1| Materials and methods for the modification ... 84 3e-040
dbj|BD224366.1| Materials and methods for the modification ... 84 3e-040
gb|DR092999.1|DR092999 STRR1_5_A01.g1_A033 Stem Response Re... 84 3e-040
gb|DR092921.1|DR092921 STRR1_5_A01.b1_A033 Stem Response Re... 84 3e-040
gb|DR069800.1|DR069800 RTDK1_9_B09.g1_A029 Roots, dark Pinu... 84 3e-040
gb|CO201630.1|CO201630 RTCNT2_7_C08.b1_A029 Root control 2 ... 84 3e-040
gb|CO201703.1|CO201703 RTCNT2_7_C08.g1_A029 Root control 2 ... 84 3e-040
gb|CO166419.1|CO166419 FLD1_61_H04.g1_A029 Root flooded Pin... 84 3e-040
gb|DR744549.1|DR744549 RTCU1_23_E12.b1_A029 Roots plus adde... 84 3e-040
gb|DR101975.1|DR101975 STRR1_77_E04.b1_A033 Stem Response R... 84 3e-040
gb|CO159169.1|CO159169 FLD1_11_H06.g1_A029 Root flooded Pin... 84 3e-040
gb|CF402273.1|CF402273 RTWW1_19_G06.g1_A015 Well-watered lo... 84 3e-040
gb|CV032697.1|CV032697 RTNACL1_17_F12.g1_A029 Roots plus ad... 84 3e-040
gb|CF399865.1|CF399865 RTWW1_1_F04.g1_A015 Well-watered lob... 84 3e-040
gb|CF401996.1|CF401996 RTWW1_16_D03.g1_A015 Well-watered lo... 84 3e-040
gb|DR101893.1|DR101893 STRR1_76_C02.g1_A033 Stem Response R... 84 3e-040
gb|DR116726.1|DR116726 RTMG1_2_A01.g1_A029 Roots minus magn... 84 4e-040
gb|BX784216.1|BX784216 BX784216 Pinus pinaster differenciat... 82 9e-040
gb|DR019194.1|DR019194 STRS1_28_H10.b2_A034 Shoot tip pitch... 84 2e-039
gb|DR116666.1|DR116666 RTMG1_2_C01.b1_A029 Roots minus magn... 86 3e-039
gb|DR079127.1|DR079127 RTFEPL1_9_F05.b1_A029 Roots plus add... 126 4e-039
gb|DR019282.1|DR019282 STRS1_28_H10.g1_A034 Shoot tip pitch... 84 4e-039
gb|CF402026.1|CF402026 RTWW1_16_B04.g1_A015 Well-watered lo... 112 8e-039
gb|CF473738.1|CF473738 RTWW2_4_E01.g1_A021 Well-watered lob... 112 8e-039
gb|DR018150.1|DR018150 STRS1_20_F09.g1_A034 Shoot tip pitch... 125 3e-038
gb|DR052598.1|DR052598 RTCA1_5_D09.g1_A029 Roots minus calc... 128 5e-038
gb|CV033633.1|CV033633 RTNACL1_35_E05.g1_A029 Roots plus ad... 128 5e-038
gb|DR052644.1|DR052644 RTCA1_5_H11.g1_A029 Roots minus calc... 130 7e-038
gb|BG526919.1|BG526919 NXPV_057_D07_F NXPV (Nsf Xylem Plani... 82 1e-037
gb|DR094995.1|DR094995 STRR1_18_C12.b1_A033 Stem Response R... 129 1e-037
gb|CO362125.1|CO362125 RTK1_1_A01.g1_A029 Roots minus potas... 138 5e-037
gb|BX253310.1|BX253310 BX253310 Pinus pinaster differenciat... 84 6e-037
gb|DR101710.1|DR101710 STRR1_75_F02.b1_A033 Stem Response R... 117 1e-036
gb|CO200758.1|CO200758 RTCNT2_1_G11.b1_A029 Root control 2 ... 84 1e-036
gb|DR016143.1|DR016143 STRS1_8_A11.b1_A034 Shoot tip pitch ... 129 8e-036
gb|DR055128.1|DR055128 RTCA1_21_E12.g2_A029 Roots minus cal... 82 1e-035
gb|BQ107732.1|BQ107732 NXLV103_F06_F NXLV (Nsf Xylem Late w... 110 1e-035
gb|DR071752.1|DR071752 RTDK1_21_H05.g1_A029 Roots, dark Pin... 84 1e-034
gb|CO200836.1|CO200836 RTCNT2_1_G11.g1_A029 Root control 2 ... 84 4e-034
gb|BI077306.1|BI077306 NXPV_095_D09_F NXPV (Nsf Xylem Plani... 84 1e-033
gb|DR052557.1|DR052557 RTCA1_5_H11.b1_A029 Roots minus calc... 130 2e-033
gb|DR052520.1|DR052520 RTCA1_5_D09.b1_A029 Roots minus calc... 128 6e-033
gb|DR743998.1|DR743998 RTCU1_19_C05.g1_A029 Roots plus adde... 84 7e-033
dbj|BD224475.1| Materials and methods for the modification ... 141 8e-033
gb|DR100567.1|DR100567 STRR1_65_D03.b1_A033 Stem Response R... 84 5e-032
gb|CF671298.1|CF671298 RTCNT1_56_D06.b1_A029 Root control P... 84 5e-032
gb|CF385606.1|CF385606 RTDR1_5_D06.b1_A015 Loblolly pine ro... 84 5e-032
gb|CO159104.1|CO159104 FLD1_11_H06.b1_A029 Root flooded Pin... 84 5e-032
gb|DR016509.1|DR016509 STRS1_10_C03.g1_A034 Shoot tip pitch... 130 5e-032
gb|DR096367.1|DR096367 STRR1_27_C01.g1_A033 Stem Response R... 82 2e-031
gb|DR017313.1|DR017313 STRS1_15_B04.g1_A034 Shoot tip pitch... 129 2e-031
gb|BF169470.1|BF169470 NXCI_123_A06_F NXCI (Nsf Xylem Compr... 73 1e-030
gb|DR016971.1|DR016971 STRS1_13_F09.b1_A034 Shoot tip pitch... 85 1e-030
gb|DR742574.1|DR742574 RTCU1_5_D01.b2_A029 Roots plus added... 133 2e-030
gb|CX645793.1|CX645793 COLD1_5_G11.b1_A029 Root cold Pinus ... 130 1e-029
gb|DR015667.1|DR015667 STRS1_4_H07.g1_A034 Shoot tip pitch ... 130 1e-029
gb|DR385194.1|DR385194 RTHG1_7_E08.b1_A029 Roots plus added... 130 1e-029
gb|DR388548.1|DR388548 RTHG1_29_A02.b1_A029 Roots plus adde... 130 1e-029
gb|DR079994.1|DR079994 RTFEPL1_19_H03.b1_A029 Roots plus ad... 129 2e-029
gb|DR102163.1|DR102163 STRR1_79_A04.b1_A033 Stem Response R... 129 2e-029
gb|DR181227.1|DR181227 RTMNUT1_37_D03.g2_A029 Roots minus m... 129 3e-029
gb|CV033545.1|CV033545 RTNACL1_35_E05.b1_A029 Roots plus ad... 128 4e-029
gb|AW290167.1|AW290167 NXNV015G05F Nsf Xylem Normal wood Ve... 84 6e-029
gb|CD026879.1|CD026879 NXNV015G05 Nsf Xylem Normal wood Ver... 84 6e-029
gb|CX714585.1|CX714585 RTPQ1_23_E02.g1_A032 Roots treated w... 84 7e-029
gb|BF518234.1|BF518234 NXSI_036_F06_F NXSI (Nsf Xylem Side ... 84 7e-029
gb|AI812407.1|AI812407 10A6 Pine Lambda Zap Xylem library P... 84 2e-028
gb|CF393502.1|CF393502 RTDR3_13_D03.g1_A022 Loblolly pine r... 82 2e-028
gb|DR098995.1|DR098995 STRR1_50_E02.b1_A033 Stem Response R... 125 4e-028
gb|U39405.1|PTU39405 Pinus taeda xylem 4-coumarate:CoA liga... 64 7e-028
gb|U39404.1|PTU39404 Pinus taeda xylem 4-coumarate:CoA liga... 64 7e-028
gb|DR742648.1|DR742648 RTCU1_5_D01.g2_A029 Roots plus added... 95 2e-027
gb|DR388347.1|DR388347 RTHG1_27_E04.g1_A029 Roots plus adde... 121 7e-027
gb|DR386037.1|DR386037 RTHG1_12_B08.g1_A029 Roots plus adde... 84 1e-026
gb|DR049100.1|DR049100 RTBOR1_13_H01.b1_A029 Roots plus add... 84 1e-026
gb|CF669432.1|CF669432 RTCNT1_43_G10.b1_A029 Root control P... 84 1e-026
gb|BG317657.1|BG317657 NXPV_004_C07_F NXPV (Nsf Xylem Plani... 84 1e-026
gb|CF401087.1|CF401087 RTWW1_10_F02.b1_A015 Well-watered lo... 84 1e-026
gb|BQ698042.1|BQ698042 NXPV_063_H04_F NXPV (Nsf Xylem Plani... 84 1e-026
gb|CF390990.1|CF390990 RTDR3_3_G03.b1_A022 Loblolly pine ro... 84 1e-026
gb|BI643841.1|BI643841 NXPV_123_F05_F NXPV (Nsf Xylem Plani... 84 1e-026
gb|CF671894.1|CF671894 RTCNT1_60_A12.b1_A029 Root control P... 84 1e-026
gb|DR102397.1|DR102397 STRR1_80_G02.g1_A033 Stem Response R... 84 1e-026
gb|BX251844.1|BX251844 BX251844 Pinus pinaster differenciat... 82 5e-026
gb|DR177291.1|DR177291 RTMNUT1_4_H11.b1_A029 Roots minus mi... 117 1e-025
gb|DR095071.1|DR095071 STRR1_18_C12.g1_A033 Stem Response R... 69 6e-025
gb|DR022275.1|DR022275 STRS1_50_A09.b1_A034 Shoot tip pitch... 69 3e-024
gb|DR744616.1|DR744616 RTCU1_23_E12.g1_A029 Roots plus adde... 64 4e-023
gb|DR018039.1|DR018039 STRS1_20_D02.b1_A034 Shoot tip pitch... 64 4e-023
gb|BQ702559.1|BQ702559 NXSI_130_A02_F NXSI (Nsf Xylem Side ... 64 5e-023
gb|DR742979.1|DR742979 RTCU1_8_E11.g2_A029 Roots plus added... 61 9e-023
gb|BQ696109.1|BQ696109 NXPV_036_D12_F NXPV (Nsf Xylem Plani... 68 4e-022
gb|DR081795.1|DR081795 RTFEPL1_32_G09.b1_A029 Roots plus ad... 105 5e-022
gb|DR116749.1|DR116749 RTMG1_2_C01.g1_A029 Roots minus magn... 64 2e-021
gb|AH014199.1|SEG_AY764396S Pinus taeda isolate 10 4-coumar... 57 2e-021
gb|AH014205.1|SEG_AY764414S Pinus taeda isolate 30 4-coumar... 57 2e-021
gb|AH014212.1|SEG_AY764435S Pinus taeda isolate 11 4-coumar... 57 2e-021
gb|AH014217.1|SEG_AY764450S Pinus taeda isolate 3 4-coumara... 57 2e-021
gb|AH014220.1|SEG_AY764459S Pinus taeda isolate 9 4-coumara... 57 2e-021
gb|AH014226.1|SEG_AY764477S Pinus taeda isolate 21 4-coumar... 57 2e-021
gb|AH014198.1|SEG_AY764393S Pinus taeda isolate 22 4-coumar... 57 3e-021
gb|AH014200.1|SEG_AY764399S Pinus taeda isolate 24 4-coumar... 57 3e-021
gb|AH014201.1|SEG_AY764402S Pinus taeda isolate 15 4-coumar... 57 3e-021
gb|AH014202.1|SEG_AY764405S Pinus taeda isolate 17 4-coumar... 57 3e-021
gb|AH014203.1|SEG_AY764408S Pinus taeda isolate 23 4-coumar... 57 3e-021
gb|AH014204.1|SEG_AY764411S Pinus taeda isolate 16 4-coumar... 57 3e-021
gb|AH014206.1|SEG_AY764417S Pinus taeda isolate 13 4-coumar... 57 3e-021
gb|AH014208.1|SEG_AY764423S Pinus taeda isolate 7 4-coumara... 57 3e-021
gb|AH014209.1|SEG_AY764426S Pinus taeda isolate 31 4-coumar... 57 3e-021
gb|AH014213.1|SEG_AY764438S Pinus taeda isolate 27 4-coumar... 57 3e-021
gb|AH014214.1|SEG_AY764441S Pinus taeda isolate 8 4-coumara... 57 3e-021
gb|AH014215.1|SEG_AY764444S Pinus taeda isolate 26 4-coumar... 57 3e-021
gb|AH014218.1|SEG_AY764453S Pinus taeda isolate 4 4-coumara... 57 3e-021
gb|AH014221.1|SEG_AY764462S Pinus taeda isolate 1 4-coumara... 57 3e-021
gb|AH014222.1|SEG_AY764465S Pinus taeda isolate 19 4-coumar... 57 3e-021
gb|AH014223.1|SEG_AY764468S Pinus taeda isolate 29 4-coumar... 57 3e-021
gb|AH014224.1|SEG_AY764471S Pinus taeda isolate 18 4-coumar... 57 3e-021
gb|AH014225.1|SEG_AY764474S Pinus taeda isolate 20 4-coumar... 57 3e-021
gb|AH014227.1|SEG_AY764480S Pinus taeda isolate 12 4-coumar... 57 3e-021
gb|AH014228.1|SEG_AY764483S Pinus taeda isolate 2 4-coumara... 57 3e-021
gb|AH014229.1|SEG_AY764486S Pinus taeda isolate 14 4-coumar... 57 3e-021
gb|AH014207.1|SEG_AY764420S Pinus taeda isolate 28 4-coumar... 57 3e-021
gb|AH014210.1|SEG_AY764429S Pinus taeda isolate 32 4-coumar... 57 3e-021
gb|AH014216.1|SEG_AY764447S Pinus taeda isolate 5 4-coumara... 57 3e-021
gb|AH014219.1|SEG_AY764456S Pinus taeda isolate 6 4-coumara... 57 3e-021
gb|AH014211.1|SEG_AY764432S Pinus taeda isolate 25 4-coumar... 57 7e-021
>dbj|BD224541.1| Materials and methods for the modification of plant lignin content
Length = 1790
Score = 166 bits (358), Expect(2) = 8e-059
Identities = 72/98 (73%), Positives = 83/98 (84%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEAILLSHPSVEDAAV LPDEEAGE+PA+CVV A E+E D+
Sbjct: 1369 KELIKYKGFQVAPAELEAILLSHPSVEDAAVVPLPDEEAGEIPAACVVMAASATETEDDI 1548
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRD 439
+VA +VA+YK++RL++FV IPKS SGKILRR LRD
Sbjct: 1549 SKFVASQVATYKRVRLVKFVSTIPKSSSGKILRRLLRD 1662
Score = 129 bits (276), Expect = 3e-029
Identities = 73/160 (45%), Positives = 83/160 (51%)
Frame = +2 / -1
Query: 440 SLSCLRRILPDTDLGMASTKRSSRSFLYDATRPATYAIMSASLSGAPRRRTTHDXXXXXX 619
SL LRRI P+ DLGM T +S + LY AT AT MS+S+S A TTH
Sbjct: 1661 SLRSLRRIFPEEDLGMVDTNFTSLTLLYVATCDATNFEMSSSVSVALAAITTHAAGISPA 1482
Query: 620 XXXXXXXXXXXXXDG*DSRMASSSAGATWKPLYLMSSLXXXXXXXXXXXXXXXXXXVWSH 799
DG*+SRMASSSAGAT KPLYL+SSL V S
Sbjct: 1481 SSSGKGTTAASSTDG*ESRMASSSAGAT*KPLYLISSLILSTMNTSSSSSMKPTSPVCSQ 1302
Query: 800 PAASMVRSVSSFLL**PCITAWLRTQISPGGFLGSDRPVS 919
P+ S V SVS L* P +T WL T SP FLG+D PVS
Sbjct: 1301 PSLSTVFSVSVGFL*YPRMTHWLLTHTSPMEFLGNDFPVS 1182
Score = 81.3 bits (171), Expect(2) = 8e-059
Identities = 28/44 (63%), Positives = 38/44 (86%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG+SLP+N GE+CVRSQ VM+GYY++ ETE+T+D+ GWLHT
Sbjct: 1183 ETGKSLPRNSIGEVCVRSQCVMRGYYKKPTETEKTVDSDGWLHT 1314
>gb|DR111859.1|DR111859 RTS1_20_F02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_20_F02_A029 5', mRNA sequence
Length = 816
Score = 134 bits (287), Expect(2) = 8e-046
Identities = 59/97 (60%), Positives = 74/97 (76%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELEAIL++HPS+ DAAV DEEAGEVP + VVR G +E ++
Sbjct: 326 KEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEEAGEVPVAFVVRSNGFDLTEDEI 505
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+VA +V YKKLR + F+ AIPKS +GKILR++LR
Sbjct: 506 KQFVAKQVVFYKKLRKVYFIPAIPKSPAGKILRKELR 616
Score = 70.3 bits (147), Expect(2) = 8e-046
Identities = 27/44 (61%), Positives = 30/44 (68%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG SLP N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 140 DTGVSLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 271
>gb|DR079274.1|DR079274 RTFEPL1_10_F01.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_10_F01_A029 3', mRNA sequence
Length = 880
Score = 129 bits (277), Expect(2) = 5e-044
Identities = 59/105 (56%), Positives = 74/105 (70%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELEAIL++HPS+ DAAV DE AGEVP + VVR G +E ++
Sbjct: 210 KEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFDLTEDEI 389
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTA 418
+VA +V YKKL + F+ AIPKS SGKILR+ LR + T+
Sbjct: 390 KQFVAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDLRAKLSAPTS 524
Score = 68.9 bits (144), Expect(2) = 5e-044
Identities = 26/44 (59%), Positives = 29/44 (65%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG LP N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 24 DTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 155
>gb|DR017244.1|DR017244 STRS1_15_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_15_B04_A034 3', mRNA sequence
Length = 847
Score = 129 bits (277), Expect(2) = 5e-044
Identities = 59/105 (56%), Positives = 74/105 (70%)
Frame = -2 / -3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELEAIL++HPS+ DAAV DE AGEVP + VVR G +E ++
Sbjct: 452 KEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFDLTEDEI 273
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTA 418
+VA +V YKKL + F+ AIPKS SGKILR+ LR + T+
Sbjct: 272 KQFVAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDLRAKLSAPTS 138
Score = 68.9 bits (144), Expect(2) = 5e-044
Identities = 26/44 (59%), Positives = 29/44 (65%)
Frame = -2 / -3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG LP N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 638 DTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 507
>gb|DR048277.1|DR048277 RTBOR1_7_E05.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_7_E05_A029 5', mRNA sequence
Length = 740
Score = 129 bits (277), Expect(2) = 5e-044
Identities = 59/105 (56%), Positives = 74/105 (70%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELEAIL++HPS+ DAAV DE AGEVP + VVR G +E ++
Sbjct: 285 KEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFDLTEDEI 464
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTA 418
+VA +V YKKL + F+ AIPKS SGKILR+ LR + T+
Sbjct: 465 KQFVAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDLRAKLSAPTS 599
Score = 68.9 bits (144), Expect(2) = 5e-044
Identities = 26/44 (59%), Positives = 29/44 (65%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG LP N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 99 DTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 230
>gb|CF473581.1|CF473581 RTWW2_3_F07.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_3_F07_A021 5', mRNA sequence
Length = 703
Score = 129 bits (277), Expect(2) = 5e-044
Identities = 59/105 (56%), Positives = 74/105 (70%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELEAIL++HPS+ DAAV DE AGEVP + VVR G +E ++
Sbjct: 340 KEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFDLTEDEI 519
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTA 418
+VA +V YKKL + F+ AIPKS SGKILR+ LR + T+
Sbjct: 520 KQFVAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDLRAKLSAPTS 654
Score = 68.9 bits (144), Expect(2) = 5e-044
Identities = 26/44 (59%), Positives = 29/44 (65%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG LP N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 154 DTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 285
>dbj|BD224542.1| Materials and methods for the modification of plant lignin content
Length = 2043
Score = 131 bits (281), Expect(2) = 1e-043
Identities = 55/97 (56%), Positives = 75/97 (77%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HPS+ DAAV + DE AGEVP + VV+ G+ +E ++
Sbjct: 1397 KELIKYKGFQVAPAELEAMLIAHPSISDAAVVPMKDEVAGEVPVAFVVKSNGSVITEDEI 1576
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
Y++ +V YK+++ + F DAIPK+ SGKILR+ LR
Sbjct: 1577 KQYISKQVVFYKRIKRVFFTDAIPKAPSGKILRKDLR 1687
Score = 65.7 bits (137), Expect(2) = 1e-043
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N GEIC+R +M+GY E T TID GWLHT
Sbjct: 1211 ETGASLPRNQAGEICIRGHQIMKGYLNDAEATANTIDKEGWLHT 1342
>gb|CO367090.1|CO367090 RTK1_32_C09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_C09_A029 3', mRNA sequence
Length = 834
Score = 125 bits (268), Expect(2) = 2e-043
Identities = 56/97 (57%), Positives = 69/97 (71%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELE IL++HPS+ DAAV DE AGEVP + VVR G +E D+
Sbjct: 313 KEIIKYKGFQVPPAELEDILITHPSIADAAVIPQRDEVAGEVPVAFVVRSNGFDVTEDDI 492
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+VA +V YKKL + F+ IPKS +GKILR+ LR
Sbjct: 493 KQFVAKQVVFYKKLHKVYFIHGIPKSPAGKILRKDLR 603
Score = 71.2 bits (149), Expect(2) = 2e-043
Identities = 27/44 (61%), Positives = 30/44 (68%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG SLP N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 127 DTGASLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 258
>gb|DR024373.1|DR024373 STRS1_64_C04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_64_C04_A034 5', mRNA sequence
Length = 880
Score = 141 bits (302), Expect(2) = 8e-043
Identities = 62/96 (64%), Positives = 74/96 (77%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELE ILL+HP + DA V LPD +AGEVP + VVR G+ +E D
Sbjct: 544 KELIKYKGFQVAPAELEGILLTHPQIADAGVIPLPDLKAGEVPIAYVVRTPGSSLTEKDA 365
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
M YVA +VA +K+L + FVD+IPKS SGKILRR+L
Sbjct: 364 MDYVAKQVAPFKRLHRVNFVDSIPKSASGKILRREL 257
Score = 53.3 bits (110), Expect(2) = 8e-043
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -2 / -1
Query: 915 TGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
TG+ LP N GE+ +R +M GY+ T+ T+D GWLHT
Sbjct: 727 TGKPLPPNQRGEVWLRGPNIMTGYFNNPSATKITLDTEGWLHT 599
>gb|CO201211.1|CO201211 RTCNT2_4_G07.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_4_G07_A029 3', mRNA sequence
Length = 703
Score = 136 bits (292), Expect(2) = 2e-041
Identities = 60/96 (62%), Positives = 75/96 (78%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELE +LLS+P + DAAV PD+EAG+VP S VVR+ G+ E D+
Sbjct: 245 KELIKYKGFQVAPAELEELLLSNPEITDAAVIPYPDKEAGQVPMSFVVRKPGSNLCEEDV 424
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
+VA +V+SYKK+R + FV +IPKS SGKILR+ L
Sbjct: 425 KKFVAKQVSSYKKIRRVAFVTSIPKSPSGKILRKDL 532
Score = 53.3 bits (110), Expect(2) = 2e-041
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = -2 / +2
Query: 915 TGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
TG++LP N GE+ +R +M+GY+ E T T+D+ GWL T
Sbjct: 62 TGKALPPNHKGELWLRGPTIMKGYFGNDEATASTLDSEGWLKT 190
>gb|CF402601.1|CF402601 RTWW1_21_D04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_21_D04_A015 5', mRNA sequence
Length = 771
Score = 119 bits (255), Expect(2) = 5e-041
Identities = 54/94 (57%), Positives = 66/94 (70%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELEAIL++HPS+ DAAV DE AGEVP + VVR G +E ++
Sbjct: 421 KEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFDLTEDEI 600
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRR 451
+VA +V YKKL + F+ AIPKS SGK R
Sbjct: 601 KQFVAKQVVFYKKLHKVYFIHAIPKSPSGKYCER 702
Score = 68.9 bits (144), Expect(2) = 5e-041
Identities = 26/44 (59%), Positives = 29/44 (65%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG LP N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 235 DTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 366
>gb|CO362045.1|CO362045 NDL2_8_G01.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_G01_A029 5', mRNA sequence
Length = 749
Score = 83.5 bits (176), Expect(3) = 2e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / -3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 522 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 352
Score = 64.3 bits (134), Expect(3) = 2e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / -3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 708 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 577
Score = 57.0 bits (118), Expect(3) = 2e-040
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = -2 / -3
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR + K
Sbjct: 363 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSKLAAK 220
>gb|CX653107.1|CX653107 COLD1_63_A08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_63_A08_A029 5', mRNA sequence
Length = 766
Score = 136 bits (292), Expect(2) = 2e-040
Identities = 60/96 (62%), Positives = 75/96 (78%)
Frame = -2 / -2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELE +LLS+P + DAAV PD+EAG+VP S VVR+ G+ E D+
Sbjct: 447 KELIKYKGFQVAPAELEELLLSNPEITDAAVIPYPDKEAGQVPMSFVVRKPGSNLCEEDV 268
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
+VA +V+SYKK+R + FV +IPKS SGKILR+ L
Sbjct: 267 KKFVAKQVSSYKKIRRVAFVTSIPKSPSGKILRKDL 160
Score = 49.6 bits (102), Expect(2) = 2e-040
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = -2 / -2
Query: 915 TGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
TG++LP N GE+ +R +M+GY+ E T T+D+ WL T
Sbjct: 630 TGKALPPNHKGELWLRGPTIMKGYFGNDEATASTLDSERWLKT 502
>gb|U12013.1|PTU12013 Pinus taeda PT4CL2 4-coumarate-CoA ligase enzyme mRNA, complete cds
Length = 1972
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 1451 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 1621
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 1265 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 1396
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +2
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 1610 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 1753
>gb|U12012.1|PTU12012 Pinus taeda PT4CL1 4-coumarate-CoA ligase enzyme mRNA, complete cds
Length = 1969
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 1451 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 1621
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 1265 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 1396
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +2
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 1610 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 1753
>dbj|BD224332.1| Materials and methods for the modification of plant lignin content
Length = 1961
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 1410 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 1580
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 1224 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 1355
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +3
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 1569 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 1712
>dbj|BD272988.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 1961
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 1410 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 1580
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 1224 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 1355
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +3
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 1569 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 1712
>dbj|BD224366.1| Materials and methods for the modification of plant lignin content
Length = 1960
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 1409 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 1579
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 1223 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 1354
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +2
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 1568 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 1711
>gb|DR092999.1|DR092999 STRR1_5_A01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_A01_A033 5', mRNA sequence
Length = 920
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 469 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 639
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 283 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 414
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +1
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 628 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 771
>gb|DR092921.1|DR092921 STRR1_5_A01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_A01_A033 3', mRNA sequence
Length = 858
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 350 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 520
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 164 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 295
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +2
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 509 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 652
>gb|DR069800.1|DR069800 RTDK1_9_B09.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_9_B09_A029 5', mRNA sequence
Length = 854
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 310 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 480
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 124 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 255
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +1
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 469 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 612
>gb|CO201630.1|CO201630 RTCNT2_7_C08.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_7_C08_A029 3', mRNA sequence
Length = 852
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 312 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 482
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 126 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 257
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +3
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 471 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 614
>gb|CO201703.1|CO201703 RTCNT2_7_C08.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_7_C08_A029 5', mRNA sequence
Length = 845
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 392 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 562
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 206 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 337
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +2
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 551 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 694
>gb|CO166419.1|CO166419 FLD1_61_H04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_61_H04_A029 5', mRNA sequence
Length = 843
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 418 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 588
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 232 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 363
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +1
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 577 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 720
>gb|DR744549.1|DR744549 RTCU1_23_E12.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_E12_A029 3', mRNA sequence
Length = 799
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 360 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 530
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 174 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 305
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +3
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 519 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 662
>gb|DR101975.1|DR101975 STRR1_77_E04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_77_E04_A033 3', mRNA sequence
Length = 784
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 266 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 436
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 80 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 211
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +2
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 425 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 568
>gb|CO159169.1|CO159169 FLD1_11_H06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_11_H06_A029 5', mRNA sequence
Length = 781
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 272 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 442
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 86 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 217
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +2
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 431 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 574
>gb|CF402273.1|CF402273 RTWW1_19_G06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_19_G06_A015 5', mRNA sequence
Length = 738
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 351 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 521
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 165 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 296
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +3
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 510 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 653
>gb|CV032697.1|CV032697 RTNACL1_17_F12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_17_F12_A029 5', mRNA sequence
Length = 733
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 514 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 344
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / -1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 700 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 569
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / -1
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 355 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 212
>gb|CF399865.1|CF399865 RTWW1_1_F04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_1_F04_A015 5', mRNA sequence
Length = 728
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 298 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 468
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 112 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 243
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +1
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 457 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 600
>gb|CF401996.1|CF401996 RTWW1_16_D03.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_16_D03_A015 5', mRNA sequence
Length = 718
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 205 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 375
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 19 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 150
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +1
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 364 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 507
>gb|DR101893.1|DR101893 STRR1_76_C02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_76_C02_A033 5', mRNA sequence
Length = 664
Score = 83.5 bits (176), Expect(3) = 3e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / -2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 447 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 277
Score = 64.3 bits (134), Expect(3) = 3e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / -2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 633 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 502
Score = 56.5 bits (117), Expect(3) = 3e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / -2
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 288 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 145
>gb|DR116726.1|DR116726 RTMG1_2_A01.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_2_A01_A029 5', mRNA sequence
Length = 753
Score = 83.5 bits (176), Expect(3) = 4e-040
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 326 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 496
Score = 64.3 bits (134), Expect(3) = 4e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 140 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 271
Score = 56.1 bits (116), Expect(3) = 4e-040
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = -2 / +2
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 485 SEQEIKEFVAKHVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 628
>gb|BX784216.1|BX784216 BX784216 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 130G11 similar to 4-coumarate--CoA ligase (EC
6.2.1.12), mRNA sequence
Length = 707
Score = 81.7 bits (172), Expect(3) = 9e-040
Identities = 35/57 (61%), Positives = 42/57 (73%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EE GEVP + VV+ E E
Sbjct: 241 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEETGEVPVAFVVKSSEISEQE 411
Score = 64.3 bits (134), Expect(3) = 9e-040
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 55 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 186
Score = 56.5 bits (117), Expect(3) = 9e-040
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +1
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 400 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 543
>gb|DR019194.1|DR019194 STRS1_28_H10.b2_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_H10_A034 3', mRNA sequence
Length = 836
Score = 83.5 bits (176), Expect(3) = 2e-039
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 322 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 492
Score = 61.6 bits (128), Expect(3) = 2e-039
Identities = 23/44 (52%), Positives = 27/44 (61%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N G IC+R +M+GY E T TID GWLHT
Sbjct: 136 ETGESLPHNQAGXICIRGPEIMKGYINDPESTAATIDEEGWLHT 267
Score = 56.5 bits (117), Expect(3) = 2e-039
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +1
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 481 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 624
>gb|DR116666.1|DR116666 RTMG1_2_C01.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_2_C01_A029 3', mRNA sequence
Length = 730
Score = 85.8 bits (181), Expect(3) = 3e-039
Identities = 36/57 (63%), Positives = 44/57 (77%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA++++HPS+ DAAVF EEAGEVP + VV+ E E
Sbjct: 213 KEIIKYKGFQVAPAELEALIVAHPSIADAAVFPQKHEEAGEVPVAFVVKSSEISEQE 383
Score = 58.3 bits (121), Expect(3) = 3e-039
Identities = 23/44 (52%), Positives = 27/44 (61%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID G LHT
Sbjct: 27 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGGLHT 158
Score = 56.5 bits (117), Expect(3) = 3e-039
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +3
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 372 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 515
>gb|DR079127.1|DR079127 RTFEPL1_9_F05.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_F05_A029 3', mRNA sequence
Length = 895
Score = 126 bits (270), Expect(2) = 4e-039
Identities = 58/105 (55%), Positives = 73/105 (69%)
Frame = -2 / -2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYK FQV PAELEAIL++HPS+ DAAV DE AGEVP + VVR G +E ++
Sbjct: 675 KEIIKYKDFQVPPAELEAILITHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFDLTEDEI 496
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTA 418
+VA +V YKKL + F+ AIPKS SGKILR+ LR + T+
Sbjct: 495 KQFVAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDLRAKLSAPTS 361
Score = 55.6 bits (115), Expect(2) = 4e-039
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -2 / -2
Query: 888 PGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 831 PGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 730
>gb|DR019282.1|DR019282 STRS1_28_H10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_H10_A034 5', mRNA sequence
Length = 791
Score = 83.5 bits (176), Expect(3) = 4e-039
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 508 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 678
Score = 64.3 bits (134), Expect(3) = 4e-039
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 322 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 453
Score = 52.4 bits (108), Expect(3) = 4e-039
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2 / +1
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ L
Sbjct: 667 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 789
>gb|CF402026.1|CF402026 RTWW1_16_B04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_16_B04_A015 5', mRNA sequence
Length = 734
Score = 112 bits (239), Expect(2) = 8e-039
Identities = 50/86 (58%), Positives = 62/86 (72%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELEAIL++HPS+ DAAV DE AGEVP + VVR G +E ++
Sbjct: 473 KEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFDLTEDEI 652
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKS 475
+VA +V YKKL + F+ AIPKS
Sbjct: 653 KQFVAKQVVFYKKLHKVYFIHAIPKS 730
Score = 68.9 bits (144), Expect(2) = 8e-039
Identities = 26/44 (59%), Positives = 29/44 (65%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG LP N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 287 DTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 418
>gb|CF473738.1|CF473738 RTWW2_4_E01.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_4_E01_A021 5', mRNA sequence
Length = 623
Score = 112 bits (239), Expect(2) = 8e-039
Identities = 50/86 (58%), Positives = 62/86 (72%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELEAIL++HPS+ DAAV DE AGEVP + VVR G +E ++
Sbjct: 363 KEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFDLTEDEI 542
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKS 475
+VA +V YKKL + F+ AIPKS
Sbjct: 543 KQFVAKQVVFYKKLHKVYFIHAIPKS 620
Score = 68.9 bits (144), Expect(2) = 8e-039
Identities = 26/44 (59%), Positives = 29/44 (65%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG LP N PGEIC+R +M+GY E T RTID GWLHT
Sbjct: 177 DTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 308
>gb|DR018150.1|DR018150 STRS1_20_F09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_20_F09_A034 5', mRNA sequence
Length = 693
Score = 125 bits (268), Expect(2) = 3e-038
Identities = 54/96 (56%), Positives = 72/96 (75%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IK KG+QV+PAELEA+LL+H + DA V PD +GEVP + VVR G+ +E D+
Sbjct: 209 KEIIKVKGYQVSPAELEALLLTHSQIVDAGVIPFPDPNSGEVPIAYVVRSLGSSLTEKDV 388
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
M YVA +VA YK+L + FV++IPKS +GKILRR+L
Sbjct: 389 MDYVAKQVAPYKRLHGINFVNSIPKSSAGKILRREL 496
Score = 53.8 bits (111), Expect(2) = 3e-038
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = -2 / +2
Query: 915 TGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
TGR LP N GE+ R +M GY+ T+ T+D GWLHT
Sbjct: 26 TGRPLPPNQRGELWFRGPNIMPGYFNNPSATKSTLDEEGWLHT 154
>gb|DR052598.1|DR052598 RTCA1_5_D09.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_5_D09_A029 5', mRNA sequence
Length = 862
Score = 128 bits (275), Expect(2) = 5e-038
Identities = 53/96 (55%), Positives = 73/96 (76%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
K+LIKYK +QVAPAELE +LLSHP + +AAV PD+EAG++P + VVR G+ SE D+
Sbjct: 387 KDLIKYKAYQVAPAELEELLLSHPEISEAAVIPYPDQEAGQIPMAFVVRSPGSSLSERDV 566
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
+ +VA +V YKK+R + F ++IPK+ SGKILR+ L
Sbjct: 567 INFVAEQVIHYKKIRRVAFTNSIPKNASGKILRKDL 674
Score = 49.6 bits (102), Expect(2) = 5e-038
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
D+ + LP N GE+ +R +M+GY+ + T T+D+ GWL T
Sbjct: 201 DSAKPLPPNHRGELLLRGPTIMKGYFGNEHATASTLDSEGWLRT 332
>gb|CV033633.1|CV033633 RTNACL1_35_E05.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_35_E05_A029 5', mRNA sequence
Length = 772
Score = 128 bits (275), Expect(2) = 5e-038
Identities = 53/96 (55%), Positives = 73/96 (76%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
K+LIKYK +QVAPAELE +LLSHP + +AAV PD+EAG++P + VVR G+ SE D+
Sbjct: 341 KDLIKYKAYQVAPAELEELLLSHPEISEAAVIPYPDQEAGQIPMAFVVRSPGSSLSERDV 520
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
+ +VA +V YKK+R + F ++IPK+ SGKILR+ L
Sbjct: 521 INFVAEQVIHYKKIRRVAFTNSIPKNASGKILRKDL 628
Score = 49.6 bits (102), Expect(2) = 5e-038
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
D+ + LP N GE+ +R +M+GY+ + T T+D+ GWL T
Sbjct: 155 DSAKPLPPNHRGELLLRGPTIMKGYFGNEHATASTLDSEGWLRT 286
>gb|DR052644.1|DR052644 RTCA1_5_H11.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_5_H11_A029 5', mRNA sequence
Length = 803
Score = 130 bits (279), Expect(2) = 7e-038
Identities = 55/96 (57%), Positives = 73/96 (76%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QVAPAELEA+L SHP + D AV PD+EAG+VP + +VR+ G SE+ +
Sbjct: 291 KELIKYKGYQVAPAELEALLHSHPEIMDVAVIPFPDKEAGQVPMAYIVRKPGGTLSESSV 470
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
+ +VA +VA YKK+R + FV IPK+ +GKILR+ L
Sbjct: 471 INFVAQQVAPYKKVRHVAFVSEIPKNAAGKILRKDL 578
Score = 47.3 bits (97), Expect(2) = 7e-038
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -2 / +3
Query: 915 TGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+G LP N GE+ +R VM+GY+ E T T+++ GWL T
Sbjct: 108 SGTPLPPNQQGELWLRGPYVMKGYFSNTEATTSTLNSDGWLRT 236
>gb|BG526919.1|BG526919 NXPV_057_D07_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_057_D07 5' similar to Arabidopsis
thaliana sequence At3g21240 putative 4-coumarate:CoA
ligase 2 see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 550
Score = 81.7 bits (172), Expect(3) = 1e-037
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVR 586
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+
Sbjct: 193 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVK 339
Score = 64.3 bits (134), Expect(3) = 1e-037
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP N GEIC+R +M+GY E T TID GWLHT
Sbjct: 7 ETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 138
Score = 49.6 bits (102), Expect(3) = 1e-037
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = -2 / +1
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
SE + +VA +V YKK+ + FVDAIPKS SGKILR L
Sbjct: 352 SEXXIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRXXL 474
>gb|DR094995.1|DR094995 STRR1_18_C12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_18_C12_A033 3', mRNA sequence
Length = 824
Score = 129 bits (277), Expect(2) = 1e-037
Identities = 59/105 (56%), Positives = 74/105 (70%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELEAIL++HPS+ DAAV DE AGEVP + VVR G +E ++
Sbjct: 150 KEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFDLTEDEI 329
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTA 418
+VA +V YKKL + F+ AIPKS SGKILR+ LR + T+
Sbjct: 330 KQFVAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDLRAKLSAPTS 464
Score = 47.3 bits (97), Expect(2) = 1e-037
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -2 / +3
Query: 879 ICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
IC+R +M+GY E T RTID GWLHT
Sbjct: 3 ICIRGPQIMKGYLNDAESTARTIDEDGWLHT 95
>gb|CO362125.1|CO362125 RTK1_1_A01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_1_A01_A029 5', mRNA sequence
Length = 529
Score = 138 bits (297), Expect(2) = 5e-037
Identities = 61/96 (63%), Positives = 74/96 (77%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELE ILL+HP + DA V LPD +AGEVP + VVR G+ +E D
Sbjct: 147 KELIKYKGFQVAPAELEGILLTHPQIADAGVIPLPDLKAGEVPIAYVVRTPGSSLTEKDA 326
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
M YVA +VA +K+L + F+D+IPKS SGKILRR+L
Sbjct: 327 MDYVAKQVAPFKRLHRVNFMDSIPKSSSGKILRREL 434
Score = 36.3 bits (73), Expect(2) = 5e-037
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2 / +3
Query: 873 VRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+R +M GY+ T+ T+D GWLHT
Sbjct: 6 LRGPNIMTGYFNNPSATKITLDTEGWLHT 92
>gb|BX253310.1|BX253310 BX253310 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP081A07 similar to 4 coumarate CoA ligase,
mRNA sequence
Length = 680
Score = 83.5 bits (176), Expect(3) = 6e-037
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 167 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 337
Score = 57.4 bits (119), Expect(3) = 6e-037
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +2
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 326 SEQEIKEFVANQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 469
Score = 51.9 bits (107), Expect(3) = 6e-037
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -2 / +2
Query: 894 NPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
N GEIC+R +M+GY E T TID GWLHT
Sbjct: 5 NQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 112
>gb|DR101710.1|DR101710 STRR1_75_F02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_75_F02_A033 3', mRNA sequence
Length = 871
Score = 117 bits (250), Expect(2) = 1e-036
Identities = 50/96 (52%), Positives = 70/96 (72%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYK +QV PAELE +LLS+ + DAAV PD EAG++P + +VR+ + SE D+
Sbjct: 339 KELIKYKAYQVTPAELEELLLSNLEISDAAVIPYPDVEAGQIPMAFIVRKSDSNLSEEDV 518
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
+VA +V+ YK++R + FV++IPKS GKILR+ L
Sbjct: 519 KKFVAKQVSPYKRIRRVAFVNSIPKSPMGKILRKDL 626
Score = 56.5 bits (117), Expect(2) = 1e-036
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = -2 / +3
Query: 915 TGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+G+++P N GE+ +R +M+GY+R EET T+D+ GWL T
Sbjct: 156 SGKAMPPNHKGELWLRGPTIMKGYFRNDEETASTLDSEGWLKT 284
>gb|CO200758.1|CO200758 RTCNT2_1_G11.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_1_G11_A029 3', mRNA sequence
Length = 675
Score = 83.5 bits (176), Expect(3) = 1e-036
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESE 562
KE+IKYKGFQVAPAELEA+L++HPS+ DAAV EEAGEVP + VV+ E E
Sbjct: 166 KEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQE 336
Score = 56.5 bits (117), Expect(3) = 1e-036
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = -2 / +1
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKK 424
SE ++ +VA +V YKK+ + FVDAIPKS SGKILR+ LR K
Sbjct: 325 SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 468
Score = 51.9 bits (107), Expect(3) = 1e-036
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -2 / +1
Query: 894 NPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
N GEIC+R +M+GY E T TID GWLHT
Sbjct: 4 NQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 111
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 408,400,802
Number of Sequences: 355925
Number of extensions: 5025391
Number of successful extensions: 39912
Number of sequences better than 1.0e-020: 161
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 13497553440
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)