TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440958.2.1
(791 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX678852.1|BX678852 BX678852 RS Pinus pinaster cDNA clon... 136 2e-039
gb|U39301.1|PTU39301 Pinus taeda xylem caffeic acid O-methy... 133 2e-039
gb|CO197585.1|CO197585 GEO1_7_B10.g1_A029 Root gravitropism... 133 5e-039
gb|U70873.1|PRU70873 Pinus radiata O-methyltransferase (omt... 131 9e-039
gb|CF390447.1|CF390447 RTDR2_19_C10.g1_A021 Loblolly pine r... 131 9e-039
gb|DR385848.1|DR385848 RTHG1_11_F05.b1_A029 Roots plus adde... 131 9e-039
gb|CF478857.1|CF478857 RTWW3_15_E06.g1_A022 Well-watered lo... 131 9e-039
gb|CF387289.1|CF387289 RTDR1_12_B04.b1_A015 Loblolly pine r... 131 9e-039
gb|CF398420.1|CF398420 RTDS3_12_G12.g1_A022 Drought-stresse... 131 9e-039
gb|CF665309.1|CF665309 RTCNT1_15_E12.b1_A029 Root control P... 131 9e-039
gb|CF665472.1|CF665472 RTCNT1_16_E12.b1_A029 Root control P... 130 2e-038
gb|CX652953.1|CX652953 COLD1_62_B07.g1_A029 Root cold Pinus... 128 6e-038
gb|BX678762.1|BX678762 BX678762 RS Pinus pinaster cDNA clon... 136 3e-037
gb|CF664309.1|CF664309 RTCNT1_9_A12.b1_A029 Root control Pi... 124 1e-036
gb|CF385489.1|CF385489 RTDR1_4_C03.b1_A015 Loblolly pine ro... 100 7e-036
gb|CO370451.1|CO370451 RTK1_68_A10.b1_A029 Roots minus pota... 110 2e-032
gb|DR388552.1|DR388552 RTHG1_29_A07.b1_A029 Roots plus adde... 125 2e-030
gb|CO164394.1|CO164394 FLD1_47_F03.g1_A029 Root flooded Pin... 124 3e-030
gb|CO164320.1|CO164320 FLD1_47_F03.b1_A029 Root flooded Pin... 124 3e-030
gb|DR384861.1|DR384861 RTHG1_5_C09.b1_A029 Roots plus added... 124 4e-030
gb|AI812857.1|AI812857 20G9 Pine Lambda Zap Xylem library P... 131 5e-030
gb|CF385259.1|CF385259 RTDR1_2_H01.g1_A015 Loblolly pine ro... 131 5e-030
gb|CF387392.1|CF387392 RTDR1_12_B04.g1_A015 Loblolly pine r... 131 5e-030
gb|CF400142.1|CF400142 RTWW1_3_A06.g1_A015 Well-watered lob... 131 5e-030
gb|CO167211.1|CO167211 FLD1_67_C10.g1_A029 Root flooded Pin... 123 7e-030
gb|CO167139.1|CO167139 FLD1_67_C10.b1_A029 Root flooded Pin... 123 7e-030
gb|DR742592.1|DR742592 RTCU1_5_F03.b2_A029 Roots plus added... 122 1e-029
gb|CF477891.1|CF477891 RTWW3_13_E06.g1_A022 Well-watered lo... 130 1e-029
gb|CO170121.1|CO170121 NDL1_11_G04.g1_A029 Needles control ... 129 2e-029
gb|DR386464.1|DR386464 RTHG1_15_H04.b1_A029 Roots plus adde... 121 3e-029
gb|DR090448.1|DR090448 RTAL1_15_D01.b1_A029 Roots plus adde... 121 3e-029
gb|AF119225.1|AF119225 Pinus radiata caffeic acid ortho-met... 58 7e-029
gb|BX254093.1|BX254093 BX254093 Pinus pinaster differenciat... 126 2e-028
gb|CX714803.1|CX714803 RTPQ1_27_C08.b1_A032 Roots treated w... 118 2e-028
gb|CO175244.1|CO175244 NDL1_53_A11.g1_A029 Needles control ... 119 4e-028
gb|CO369886.1|CO369886 RTK1_55_A05.b1_A029 Roots minus pota... 124 6e-028
gb|CX652251.1|CX652251 COLD1_57_H09.g1_A029 Root cold Pinus... 124 6e-028
gb|CX652979.1|CX652979 COLD1_62_D10.g1_A029 Root cold Pinus... 124 6e-028
gb|DR167163.1|DR167163 RTPHOS1_17_D01.b1_A029 Roots minus p... 124 6e-028
gb|DR384933.1|DR384933 RTHG1_5_C09.g1_A029 Roots plus added... 124 6e-028
gb|BX680279.1|BX680279 BX680279 RS Pinus pinaster cDNA clon... 116 7e-028
gb|CX648030.1|CX648030 COLD1_26_C06.b1_A029 Root cold Pinus... 123 1e-027
gb|DR101310.1|DR101310 STRR1_72_B03.b1_A033 Stem Response R... 123 2e-027
gb|BG275493.1|BG275493 NXSI_139_D08_F NXSI (Nsf Xylem Side ... 122 2e-027
gb|CO170118.1|CO170118 NDL1_11_F12.g1_A029 Needles control ... 122 3e-027
gb|CX646520.1|CX646520 COLD1_9_H01.g1_A029 Root cold Pinus ... 122 3e-027
gb|CX652893.1|CX652893 COLD1_62_D10.b1_A029 Root cold Pinus... 122 3e-027
gb|CX653031.1|CX653031 COLD1_63_A10.b1_A029 Root cold Pinus... 122 3e-027
gb|DR020354.1|DR020354 STRS1_36_H04.b1_A034 Shoot tip pitch... 122 3e-027
gb|DR025455.1|DR025455 STRS1_71_E09.g1_A034 Shoot tip pitch... 122 3e-027
gb|DR060317.1|DR060317 RTNIT1_27_C10.b1_A029 Roots minus ni... 122 3e-027
gb|DR060400.1|DR060400 RTNIT1_27_C10.g1_A029 Roots minus ni... 122 3e-027
gb|DR093928.1|DR093928 STRR1_11_G04.b1_A033 Stem Response R... 122 3e-027
gb|DR094005.1|DR094005 STRR1_11_G04.g1_A033 Stem Response R... 122 3e-027
gb|DR118474.1|DR118474 RTMG1_17_F04.b1_A029 Roots minus mag... 122 3e-027
gb|DR071353.1|DR071353 RTDK1_19_G05.b1_A029 Roots, dark Pin... 122 4e-027
gb|DR072066.1|DR072066 RTDK1_23_H03.g1_A029 Roots, dark Pin... 122 4e-027
gb|DR386637.1|DR386637 RTHG1_16_B04.g1_A029 Roots plus adde... 121 8e-027
gb|DR069065.1|DR069065 RTDK1_4_D11.g1_A029 Roots, dark Pinu... 120 1e-026
gb|DR118553.1|DR118553 RTMG1_17_F04.g1_A029 Roots minus mag... 120 1e-026
dbj|BD224327.1| Materials and methods for the modification ... 120 1e-026
dbj|BD224403.1| Materials and methods for the modification ... 120 1e-026
gb|DR020424.1|DR020424 STRS1_36_H04.g1_A034 Shoot tip pitch... 120 1e-026
gb|DR080770.1|DR080770 RTFEPL1_25_C12.b1_A029 Roots plus ad... 120 1e-026
gb|BE758644.1|BE758644 NXCI_069_E06_F NXCI (Nsf Xylem Compr... 119 2e-026
gb|CX651603.1|CX651603 COLD1_53_C02.g1_A029 Root cold Pinus... 119 2e-026
gb|CO175245.1|CO175245 NDL1_53_A12.g1_A029 Needles control ... 119 3e-026
gb|CF388135.1|CF388135 RTDR2_1_H07.b1_A021 Loblolly pine ro... 118 4e-026
gb|DR015347.1|DR015347 STRS1_3_A05.b1_A034 Shoot tip pitch ... 118 4e-026
gb|DR015421.1|DR015421 STRS1_3_A05.g1_A034 Shoot tip pitch ... 118 4e-026
gb|DR057315.1|DR057315 RTNIT1_5_C05.b1_A029 Roots minus nit... 118 4e-026
gb|DR080794.1|DR080794 RTFEPL1_25_F08.b1_A029 Roots plus ad... 118 4e-026
gb|DR101998.1|DR101998 STRR1_77_H06.b1_A033 Stem Response R... 118 4e-026
gb|CF385119.1|CF385119 RTDR1_2_H01.b1_A015 Loblolly pine ro... 89 4e-026
gb|DR068995.1|DR068995 RTDK1_4_D11.b1_A029 Roots, dark Pinu... 118 5e-026
gb|DR161217.1|DR161217 RTFE1_10_C01.g1_A029 Roots minus iro... 89 6e-026
gb|DR101032.1|DR101032 STRR1_70_C07.b1_A033 Stem Response R... 117 7e-026
gb|CO157658.1|CO157658 FLD1_1_E03.b1_A029 Root flooded Pinu... 110 8e-026
gb|DR078688.1|DR078688 RTFEPL1_6_F04.b1_A029 Roots plus add... 116 1e-025
gb|CX647162.1|CX647162 COLD1_14_B09.b1_A029 Root cold Pinus... 108 2e-025
dbj|BD224468.1| Materials and methods for the modification ... 114 9e-025
emb|AX212322.1| Sequence 1 from Patent WO0159139 80 1e-024
emb|AX212323.1| Sequence 2 from Patent WO0159139 80 1e-024
gb|AW290074.1|AW290074 NXNV010C10F Nsf Xylem Normal wood Ve... 84 2e-024
gb|CD026734.1|CD026734 NXNV010C10 Nsf Xylem Normal wood Ver... 84 2e-024
gb|CF398398.1|CF398398 RTDS3_12_G12.b1_A022 Drought-stresse... 84 2e-024
gb|DR092192.1|DR092192 RTAL1_27_E10.b1_A029 Roots plus adde... 104 3e-024
gb|CX647330.1|CX647330 COLD1_15_G09.b1_A029 Root cold Pinus... 111 6e-024
gb|AI813142.1|AI813142 23D9 Pine Lambda Zap Xylem library P... 93 6e-024
gb|DR090910.1|DR090910 RTAL1_18_D09.b1_A029 Roots plus adde... 110 2e-023
gb|AW698291.1|AW698291 NXNV_071_D10_F Nsf Xylem Normal wood... 84 4e-023
gb|CO175243.1|CO175243 NDL1_53_A10.g1_A029 Needles control ... 105 3e-022
gb|CO170042.1|CO170042 NDL1_11_G04.b1_A029 Needles control ... 105 4e-022
gb|CF471118.1|CF471118 RTDS1_16_H07.g1_A015 Drought-stresse... 105 5e-022
gb|BQ696333.1|BQ696333 NXPV_041_B10_F NXPV (Nsf Xylem Plani... 103 2e-021
gb|CF665567.1|CF665567 RTCNT1_16_G10.g1_A029 Root control P... 78 6e-021
>gb|BX678852.1|BX678852 BX678852 RS Pinus pinaster cDNA clone RS16A04, mRNA sequence
Length = 591
Score = 136 bits (291), Expect(2) = 2e-039
Identities = 54/99 (54%), Positives = 73/99 (73%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F G++SLVD+GGG G A I +A+P + DLP+VVA AP V+++ GDMFE+V
Sbjct: 33 FDGLTSLVDIGGGTGTAIAEIVRAYPSIRGINYDLPHVVATAPHLPGVEHMGGDMFETVP 212
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVII 335
SADA+F+K I+HDWGD DC+KILK+C+KAIP G +I+
Sbjct: 213 SADAIFMKWIMHDWGDEDCIKILKSCRKAIPETGKLIIV 329
Score = 98.2 bits (208), Expect(2) = 1e-023
Identities = 51/104 (49%), Positives = 65/104 (62%)
Frame = -2 / -3
Query: 349 TTISSIITLPP*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVS 170
+ I+S I P +G+AFLQ FSIL QS+SPQSC+I ASA+ T+SNMSP T
Sbjct: 343 SAITSTIMSFPVSGIAFLQLFSILIQSSSPQSCMIHFMNMASAEGTVSNMSPPMCSTPGR 164
Query: 169 AGAPATTFGRSSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
GA ATT GRS + G A ++ +A P PPP ST+E+ P K
Sbjct: 163 WGAVATT*GRS*LMPLMEG*ALTISAMAVPVPPPISTKEVKPSK 32
Score = 48.7 bits (100), Expect(2) = 2e-039
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E EWKKI+ E GF YKII + +S+IE P
Sbjct: 456 GKERTEEEWKKILSEGGFHCYKIITIPDFQSVIEAFP 566
Score = 31.8 bits (63), Expect(2) = 1e-023
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = -2 / -3
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTP 428
G SI D +IL* NP S IFFHS S S P
Sbjct: 565 GNASITDWKSGMVIIL*Q*NPPSDKIFFHSSSVLSFP 455
>gb|U39301.1|PTU39301 Pinus taeda xylem caffeic acid O-methyltransferase (COMT-1) mRNA,
partial cds
Length = 1279
Score = 133 bits (285), Expect(2) = 2e-039
Identities = 55/114 (48%), Positives = 78/114 (68%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 649 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 828
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ADA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 829 TADAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 990
Score = 96.8 bits (205), Expect(2) = 1e-021
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = -2 / -3
Query: 319 P*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGR 140
P +G+AFLQF SIL QS+S QSC+I ASA T+SNMSP T T A ATT+GR
Sbjct: 929 PVSGIAFLQFLSILIQSSSFQSCMIHFMNMASAVGTVSNMSPPTCCTPDRDEAVATTWGR 750
Query: 139 SSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
S + G A ++ A P PPPTST+EL WK
Sbjct: 749 S*LMPLMKG*ALTISATAVPVPPPTSTKELREWK 648
Score = 49.2 bits (101), Expect(2) = 2e-039
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +1
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 1060 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 1170
Score = 29.5 bits (58), Expect(2) = 1e-021
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2 / -3
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTP 428
G SI D ++L* +NP S I FHS S S P
Sbjct: 1169 GNASITDCNAGISIML*RLNPPSNKILFHSFSVLSFP 1059
>gb|CO197585.1|CO197585 GEO1_7_B10.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_7_B10_A029 5', mRNA sequence
Length = 777
Score = 133 bits (284), Expect(2) = 5e-039
Identities = 55/114 (48%), Positives = 76/114 (66%)
Frame = +3 / -1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++S+VDVGGG G A I +A+P ++ DLP+VV+ AP T V +V GDMFESV
Sbjct: 678 FHSLNSIVDVGGGTGTAVAEIVRAYPSIKGINYDLPHVVSTAPHLTGVDHVGGDMFESVP 499
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
DA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 498 MGDAIFMKWIMHDWDDEDCIKILKNCRKAIPDTGKVIIVDVVLDADEGDNTDKK 337
Score = 96.4 bits (204), Expect(2) = 4e-022
Identities = 50/94 (53%), Positives = 57/94 (60%)
Frame = -2 / +2
Query: 319 P*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGR 140
P +G+AFLQFFSIL QS+S QSC+I AS T SNMSP T T V GA TT GR
Sbjct: 398 PVSGIAFLQFFSILIQSSSSQSCMIHFMNMASPIGTDSNMSPPT*STPVRCGAVDTT*GR 577
Query: 139 SSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
S + G A ++ A P PPPTST EL WK
Sbjct: 578 S*LMPLMEG*ALTISATAVPVPPPTSTMELREWK 679
Score = 48.7 bits (100), Expect(2) = 5e-039
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / -1
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E EWKK+++E+GF Y II + +S+IE P
Sbjct: 267 GKERTEEEWKKLLWESGFGDYNIIDIPALQSVIEAFP 157
Score = 30.9 bits (61), Expect(2) = 4e-022
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / +2
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTP 428
G SI D +IL* NP S FFHS S S P
Sbjct: 158 GNASITDCNAGMSIIL*SPNPLSHKSFFHSSSVLSFP 268
>gb|U70873.1|PRU70873 Pinus radiata O-methyltransferase (omt) mRNA, complete cds
Length = 1421
Score = 131 bits (280), Expect(2) = 9e-039
Identities = 54/114 (47%), Positives = 77/114 (67%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 656 FHSLNSLVDVGGGTGTAVAEIVRAYPFITGINYDLPHVVATASSLSGVQHVGGDMFETVP 835
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 836 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 997
Score = 49.6 bits (102), Expect(2) = 9e-039
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +2
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 1067 GKERSEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 1177
>gb|CF390447.1|CF390447 RTDR2_19_C10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_19_C10_A021 5', mRNA
sequence
Length = 847
Score = 131 bits (281), Expect(2) = 9e-039
Identities = 54/114 (47%), Positives = 77/114 (67%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 235 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 414
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 415 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 576
Score = 94.5 bits (200), Expect(2) = 4e-021
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = -2 / -3
Query: 319 P*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGR 140
P +G+AFLQF SIL QS+S QSC+I AS T+SNMSP T T A ATT+GR
Sbjct: 515 PVSGIAFLQFLSILIQSSSFQSCMIHFMNMASPVGTVSNMSPPTCCTPDRDEAVATTWGR 336
Query: 139 SSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
S + G A ++ A P PPPTST+EL WK
Sbjct: 335 S*LMPLMKG*ALTISATAVPVPPPTSTKELREWK 234
Score = 49.2 bits (101), Expect(2) = 9e-039
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +1
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 646 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 756
Score = 29.5 bits (58), Expect(2) = 4e-021
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2 / -3
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTP 428
G SI D ++L* +NP S I FHS S S P
Sbjct: 755 GNASITDCNAGISIML*RLNPPSNKILFHSFSVLSFP 645
>gb|DR385848.1|DR385848 RTHG1_11_F05.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_11_F05_A029 3', mRNA sequence
Length = 757
Score = 131 bits (281), Expect(2) = 9e-039
Identities = 54/114 (47%), Positives = 77/114 (67%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 162 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 341
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 342 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 503
Score = 94.5 bits (200), Expect(2) = 3e-021
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = -2 / -1
Query: 319 P*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGR 140
P +G+AFLQF SIL QS+S QSC+I AS T+SNMSP T T A ATT+GR
Sbjct: 442 PVSGIAFLQFLSILIQSSSFQSCMIHFMNMASPVGTVSNMSPPTCCTPDRDEAVATTWGR 263
Query: 139 SSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
S + G A ++ A P PPPTST+EL WK
Sbjct: 262 S*LMPLMKG*ALTISATAVPVPPPTSTKELREWK 161
Score = 49.2 bits (101), Expect(2) = 9e-039
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 573 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 683
Score = 29.5 bits (58), Expect(2) = 3e-021
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2 / -1
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTP 428
G SI D ++L* +NP S I FHS S S P
Sbjct: 682 GNASITDCNAGISIML*RLNPPSNKILFHSFSVLSFP 572
>gb|CF478857.1|CF478857 RTWW3_15_E06.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_15_E06_A022 5', mRNA sequence
Length = 662
Score = 131 bits (281), Expect(2) = 9e-039
Identities = 54/114 (47%), Positives = 77/114 (67%)
Frame = +3 / -3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 597 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 418
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 417 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 256
Score = 94.5 bits (200), Expect(2) = 3e-021
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = -2 / +2
Query: 319 P*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGR 140
P +G+AFLQF SIL QS+S QSC+I AS T+SNMSP T T A ATT+GR
Sbjct: 317 PVSGIAFLQFLSILIQSSSFQSCMIHFMNMASPVGTVSNMSPPTCCTPDRDEAVATTWGR 496
Query: 139 SSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
S + G A ++ A P PPPTST+EL WK
Sbjct: 497 S*LMPLMKG*ALTISATAVPVPPPTSTKELREWK 598
Score = 49.2 bits (101), Expect(2) = 9e-039
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / -3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 186 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 76
Score = 29.5 bits (58), Expect(2) = 3e-021
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2 / +2
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTP 428
G SI D ++L* +NP S I FHS S S P
Sbjct: 77 GNASITDCNAGISIML*RLNPPSNKILFHSFSVLSFP 187
>gb|CF387289.1|CF387289 RTDR1_12_B04.b1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_12_B04_A015 3', mRNA
sequence
Length = 641
Score = 131 bits (281), Expect(2) = 9e-039
Identities = 54/114 (47%), Positives = 77/114 (67%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 48 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 227
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 228 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 389
Score = 94.5 bits (200), Expect(2) = 3e-021
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = -2 / -2
Query: 319 P*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGR 140
P +G+AFLQF SIL QS+S QSC+I AS T+SNMSP T T A ATT+GR
Sbjct: 328 PVSGIAFLQFLSILIQSSSFQSCMIHFMNMASPVGTVSNMSPPTCCTPDRDEAVATTWGR 149
Query: 139 SSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
S + G A ++ A P PPPTST+EL WK
Sbjct: 148 S*LMPLMKG*ALTISATAVPVPPPTSTKELREWK 47
Score = 49.2 bits (101), Expect(2) = 9e-039
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 459 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 569
Score = 29.5 bits (58), Expect(2) = 3e-021
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2 / -2
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTP 428
G SI D ++L* +NP S I FHS S S P
Sbjct: 568 GNASITDCNAGISIML*RLNPPSNKILFHSFSVLSFP 458
>gb|CF398420.1|CF398420 RTDS3_12_G12.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_12_G12_A022 5', mRNA sequence
Length = 609
Score = 131 bits (281), Expect(2) = 9e-039
Identities = 54/114 (47%), Positives = 77/114 (67%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 36 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 215
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 216 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 377
Score = 94.5 bits (200), Expect(2) = 3e-021
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = -2 / -3
Query: 319 P*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGR 140
P +G+AFLQF SIL QS+S QSC+I AS T+SNMSP T T A ATT+GR
Sbjct: 316 PVSGIAFLQFLSILIQSSSFQSCMIHFMNMASPVGTVSNMSPPTCCTPDRDEAVATTWGR 137
Query: 139 SSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
S + G A ++ A P PPPTST+EL WK
Sbjct: 136 S*LMPLMKG*ALTISATAVPVPPPTSTKELREWK 35
Score = 49.2 bits (101), Expect(2) = 9e-039
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 447 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 557
Score = 29.5 bits (58), Expect(2) = 3e-021
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2 / -3
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTP 428
G SI D ++L* +NP S I FHS S S P
Sbjct: 556 GNASITDCNAGISIML*RLNPPSNKILFHSFSVLSFP 446
>gb|CF665309.1|CF665309 RTCNT1_15_E12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_15_E12_A029 3', mRNA sequence
Length = 592
Score = 131 bits (281), Expect(2) = 9e-039
Identities = 54/114 (47%), Positives = 77/114 (67%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 13 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 192
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 193 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 354
Score = 94.5 bits (200), Expect(2) = 3e-021
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = -2 / -3
Query: 319 P*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGR 140
P +G+AFLQF SIL QS+S QSC+I AS T+SNMSP T T A ATT+GR
Sbjct: 293 PVSGIAFLQFLSILIQSSSFQSCMIHFMNMASPVGTVSNMSPPTCCTPDRDEAVATTWGR 114
Query: 139 SSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
S + G A ++ A P PPPTST+EL WK
Sbjct: 113 S*LMPLMKG*ALTISATAVPVPPPTSTKELREWK 12
Score = 49.2 bits (101), Expect(2) = 9e-039
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +1
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 424 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 534
Score = 29.5 bits (58), Expect(2) = 3e-021
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2 / -3
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTP 428
G SI D ++L* +NP S I FHS S S P
Sbjct: 533 GNASITDCNAGISIML*RLNPPSNKILFHSFSVLSFP 423
>gb|CF665472.1|CF665472 RTCNT1_16_E12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_16_E12_A029 3', mRNA sequence
Length = 597
Score = 130 bits (278), Expect(2) = 2e-038
Identities = 52/99 (52%), Positives = 71/99 (71%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 13 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 192
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVII 335
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+
Sbjct: 193 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIV 309
Score = 94.5 bits (200), Expect(2) = 3e-021
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = -2 / -2
Query: 319 P*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGR 140
P +G+AFLQF SIL QS+S QSC+I AS T+SNMSP T T A ATT+GR
Sbjct: 293 PVSGIAFLQFLSILIQSSSFQSCMIHFMNMASPVGTVSNMSPPTCCTPDRDEAVATTWGR 114
Query: 139 SSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
S + G A ++ A P PPPTST+EL WK
Sbjct: 113 S*LMPLMKG*ALTISATAVPVPPPTSTKELREWK 12
Score = 49.2 bits (101), Expect(2) = 2e-038
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 429 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 539
Score = 29.5 bits (58), Expect(2) = 3e-021
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2 / -3
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTP 428
G SI D ++L* +NP S I FHS S S P
Sbjct: 538 GNASITDCNAGISIML*RLNPPSNKILFHSFSVLSFP 428
>gb|CX652953.1|CX652953 COLD1_62_B07.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_B07_A029 5', mRNA sequence
Length = 828
Score = 128 bits (275), Expect(2) = 6e-038
Identities = 53/114 (46%), Positives = 76/114 (66%)
Frame = +3 / -3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 589 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 410
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW D DC+KILKNC+KAIP +I+ ++ + D+K
Sbjct: 409 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTAKVIIVDVVLDADQGDNTDKK 248
Score = 93.2 bits (197), Expect(2) = 1e-020
Identities = 47/92 (51%), Positives = 57/92 (61%)
Frame = -2 / +3
Query: 313 AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGRSS 134
+G+AFLQF SIL QS+S QSC+I AS T+SNMSP T T A ATT+GRS
Sbjct: 315 SGIAFLQFLSILIQSSSFQSCMIHFMNMASPVGTVSNMSPPTCCTPDRDEAVATTWGRS* 494
Query: 133 TLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
+ G A ++ A P PPPTST+EL WK
Sbjct: 495 LMPLMKG*ALTISATAVPVPPPTSTKELREWK 590
Score = 49.2 bits (101), Expect(2) = 6e-038
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / -3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 178 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 68
Score = 29.5 bits (58), Expect(2) = 1e-020
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2 / +3
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTP 428
G SI D ++L* +NP S I FHS S S P
Sbjct: 69 GNASITDCNAGISIML*RLNPPSNKILFHSFSVLSFP 179
>gb|BX678762.1|BX678762 BX678762 RS Pinus pinaster cDNA clone RS14G09, mRNA sequence
Length = 549
Score = 136 bits (291), Expect(2) = 3e-037
Identities = 54/99 (54%), Positives = 73/99 (73%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F G++SLVD+GGG G A I +A+P + DLP+VVA AP V+++ GDMFE+V
Sbjct: 33 FDGLTSLVDIGGGTGTAIAEIVRAYPSIRGINYDLPHVVATAPHLPGVEHMGGDMFETVP 212
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVII 335
SADA+F+K I+HDWGD DC+KILK+C+KAIP G +I+
Sbjct: 213 SADAIFMKWIMHDWGDEDCIKILKSCRKAIPETGKLIIV 329
Score = 98.2 bits (208), Expect(2) = 1e-022
Identities = 51/104 (49%), Positives = 65/104 (62%)
Frame = -2 / -3
Query: 349 TTISSIITLPP*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVS 170
+ I+S I P +G+AFLQ FSIL QS+SPQSC+I ASA+ T+SNMSP T
Sbjct: 343 SAITSTIMSFPVSGIAFLQLFSILIQSSSPQSCMIHFMNMASAEGTVSNMSPPMCSTPGR 164
Query: 169 AGAPATTFGRSSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
GA ATT GRS + G A ++ +A P PPP ST+E+ P K
Sbjct: 163 WGAVATT*GRS*LMPLMEG*ALTISAMAVPVPPPISTKEVKPSK 32
Score = 41.4 bits (84), Expect(2) = 3e-037
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPV 506
G ER E EWKKI+ E GF YKII +
Sbjct: 456 GKERTEEEWKKILSEGGFHCYKIITI 533
Score = 28.6 bits (56), Expect(2) = 1e-022
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 499 MIL*DVNPASKMIFFHSRSSRSTP 428
+IL* NP S IFFHS S S P
Sbjct: 526 IIL*Q*NPPSDKIFFHSSSVLSFP 455
>gb|CF664309.1|CF664309 RTCNT1_9_A12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_9_A12_A029 3', mRNA sequence
Length = 649
Score = 124 bits (265), Expect(2) = 1e-036
Identities = 51/114 (44%), Positives = 76/114 (66%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G + I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 13 FHSLNSLVDVGGGTGTSVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 192
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW DC+KIL+NC+KAIP G +I+ ++ + D+K
Sbjct: 193 TGDAIFMKWIMHDWNVEDCIKILQNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 354
Score = 49.6 bits (102), Expect(2) = 1e-036
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +1
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 424 GKERSEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 534
>gb|CF385489.1|CF385489 RTDR1_4_C03.b1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_4_C03_A015 3', mRNA
sequence
Length = 649
Score = 99.6 bits (211), Expect(3) = 7e-036
Identities = 40/86 (46%), Positives = 58/86 (67%)
Frame = +3 / +1
Query: 123 ECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKK 302
E S P+VVA A + + V++V GDMFE+V + DA+F+K I+HDW D DC+KILKNC+K
Sbjct: 133 EASTTTSPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRK 312
Query: 303 AIPAQGGKVIILDIVVGAGSSSCDRK 380
AIP G +I+ ++ + D+K
Sbjct: 313 AIPDTGKVIIVDVVLDADQGDNTDKK 390
Score = 49.2 bits (101), Expect(3) = 7e-036
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +1
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 460 GKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 570
Score = 40.5 bits (82), Expect(3) = 7e-036
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLP 146
F ++SLVDVGGG G A I +A+P + DLP
Sbjct: 48 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLP 155
>gb|CO370451.1|CO370451 RTK1_68_A10.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_68_A10_A029 3', mRNA sequence
Length = 824
Score = 110 bits (234), Expect(2) = 2e-032
Identities = 45/95 (47%), Positives = 64/95 (67%)
Frame = +3 / +3
Query: 99 IAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCV 278
I +A+P ++ DLP+VVA AP V+++ GDMFE+V SADA+F+K I+HDWGD DC+
Sbjct: 6 IVRAYPSIKGINYDLPHVVATAPHLLGVEHMGGDMFETVPSADAIFMKWIMHDWGDEDCI 185
Query: 279 KILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKN 383
KILK C+KAI G +I+ + + + S D N
Sbjct: 186 KILKRCRKAISETGKLIIVDVVALDSNRRSGDNNN 290
Score = 49.6 bits (102), Expect(2) = 2e-032
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E EWKKI+ E GF YKII + +S+IE P
Sbjct: 372 GKERTEEEWKKILLEGGFGRYKIITIPDFQSVIEAFP 482
>gb|DR388552.1|DR388552 RTHG1_29_A07.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_29_A07_A029 3', mRNA sequence
Length = 794
Score = 125 bits (267), Expect(2) = 2e-030
Identities = 46/98 (46%), Positives = 68/98 (69%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ I++LVDVGGG G A I KA PH+ DLP V+A AP V++++G++FES
Sbjct: 208 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFESAP 387
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
SADA+F+K+ +H W D DC+K+L NC +A+P +G ++
Sbjct: 388 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPEKGKLIL 501
Score = 27.6 bits (54), Expect(2) = 2e-030
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGT 515
G ER ++W ++ AGF+ KI+ GT
Sbjct: 592 GGERTRKQWNDLLQAAGFSISKIVGRNGT 678
>gb|CO164394.1|CO164394 FLD1_47_F03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_47_F03_A029 5', mRNA sequence
Length = 895
Score = 124 bits (266), Expect(2) = 3e-030
Identities = 46/98 (46%), Positives = 68/98 (69%)
Frame = +3 / -3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ I++LVDVGGG G A I KA PH+ DLP V+A AP V++++G++FES
Sbjct: 683 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFESAP 504
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
SADA+F+K+ +H W D DC+K+L NC +A+P +G ++
Sbjct: 503 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDKGKLIL 390
Score = 27.2 bits (53), Expect(2) = 3e-030
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / -3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGT 515
G ER ++W ++ AGF+ KI+ GT
Sbjct: 299 GGERTRKQWNDLLQGAGFSISKIVGRNGT 213
>gb|CO164320.1|CO164320 FLD1_47_F03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_47_F03_A029 3', mRNA sequence
Length = 849
Score = 124 bits (266), Expect(2) = 3e-030
Identities = 46/98 (46%), Positives = 68/98 (69%)
Frame = +3 / -3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ I++LVDVGGG G A I KA PH+ DLP V+A AP V++++G++FES
Sbjct: 565 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFESAP 386
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
SADA+F+K+ +H W D DC+K+L NC +A+P +G ++
Sbjct: 385 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDKGKLIL 272
Score = 27.2 bits (53), Expect(2) = 3e-030
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / -3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGT 515
G ER ++W ++ AGF+ KI+ GT
Sbjct: 181 GGERTRKQWNDLLQGAGFSISKIVGRNGT 95
>gb|DR384861.1|DR384861 RTHG1_5_C09.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_5_C09_A029 3', mRNA sequence
Length = 705
Score = 124 bits (266), Expect(2) = 4e-030
Identities = 46/98 (46%), Positives = 68/98 (69%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ I++LVDVGGG G A I KA PH+ DLP V+A AP V++++G++FES
Sbjct: 5 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFESAP 184
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
SADA+F+K+ +H W D DC+K+L NC +A+P +G ++
Sbjct: 185 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDKGKLIL 298
Score = 27.2 bits (53), Expect(2) = 4e-030
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / +2
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGT 515
G ER ++W ++ AGF+ KI+ GT
Sbjct: 389 GGERTRKQWNDLLQGAGFSISKIVGRNGT 475
>gb|AI812857.1|AI812857 20G9 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 535
Score = 131 bits (281), Expect = 5e-030
Identities = 54/114 (47%), Positives = 77/114 (67%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 171 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 350
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 351 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 512
>gb|CF385259.1|CF385259 RTDR1_2_H01.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_2_H01_A015 5', mRNA
sequence
Length = 671
Score = 131 bits (281), Expect = 5e-030
Identities = 54/114 (47%), Positives = 77/114 (67%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 325 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 504
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 505 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 666
>gb|CF387392.1|CF387392 RTDR1_12_B04.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_12_B04_A015 5', mRNA
sequence
Length = 752
Score = 131 bits (281), Expect = 5e-030
Identities = 54/114 (47%), Positives = 77/114 (67%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 345 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 524
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 525 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 686
>gb|CF400142.1|CF400142 RTWW1_3_A06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_3_A06_A015 5', mRNA sequence
Length = 722
Score = 131 bits (281), Expect = 5e-030
Identities = 54/114 (47%), Positives = 77/114 (67%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 269 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 448
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 449 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 610
>gb|CO167211.1|CO167211 FLD1_67_C10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_C10_A029 5', mRNA sequence
Length = 852
Score = 123 bits (264), Expect(2) = 7e-030
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ I++LVDVGGG G A I KA PH+ DLP V+A AP V++++G++FE+
Sbjct: 237 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFENAP 416
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
SADA+F+K+ +H W D DC+K+L NC +A+P +G ++
Sbjct: 417 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPEKGKLIL 530
Score = 27.2 bits (53), Expect(2) = 7e-030
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGT 515
G ER ++W ++ AGF+ KI+ GT
Sbjct: 621 GGERTRKQWNDLLQGAGFSISKIVGRNGT 707
>gb|CO167139.1|CO167139 FLD1_67_C10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_C10_A029 3', mRNA sequence
Length = 803
Score = 123 bits (264), Expect(2) = 7e-030
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ I++LVDVGGG G A I KA PH+ DLP V+A AP V++++G++FE+
Sbjct: 210 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFENAP 389
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
SADA+F+K+ +H W D DC+K+L NC +A+P +G ++
Sbjct: 390 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPEKGKLIL 503
Score = 27.2 bits (53), Expect(2) = 7e-030
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGT 515
G ER ++W ++ AGF+ KI+ GT
Sbjct: 594 GGERTRKQWNDLLQGAGFSISKIVGRNGT 680
>gb|DR742592.1|DR742592 RTCU1_5_F03.b2_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_5_F03_A029 3', mRNA sequence
Length = 713
Score = 122 bits (261), Expect(2) = 1e-029
Identities = 45/95 (47%), Positives = 66/95 (69%)
Frame = +3 / +3
Query: 48 ISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSAD 227
I++LVDVGGG G A I KA PH+ DLP V+A AP V++++G++FES SAD
Sbjct: 6 INTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFESAPSAD 185
Query: 228 AVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
A+F+K+ +H W D DC+K+L NC +A+P +G ++
Sbjct: 186 AIFMKNFLHSWNDEDCIKLLNNCHQALPEKGKLIL 290
Score = 27.6 bits (54), Expect(2) = 1e-029
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGT 515
G ER ++W ++ AGF+ KI+ GT
Sbjct: 381 GGERTRKQWNDLLQAAGFSISKIVGRNGT 467
>gb|CF477891.1|CF477891 RTWW3_13_E06.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_13_E06_A022 5', mRNA sequence
Length = 721
Score = 130 bits (278), Expect = 1e-029
Identities = 52/99 (52%), Positives = 71/99 (71%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F ++SLVDVGGG G A I +A+P + DLP+VVA A + + V++V GDMFE+V
Sbjct: 396 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVP 575
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVII 335
+ DA+F+K I+HDW D DC+KILKNC+KAIP G +I+
Sbjct: 576 TGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIV 692
>gb|CO170121.1|CO170121 NDL1_11_G04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_11_G04_A029 5', mRNA sequence
Length = 791
Score = 129 bits (277), Expect = 2e-029
Identities = 53/110 (48%), Positives = 71/110 (64%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ + LVDVGGG G I +PH+ D+P+VVA AP AVK+V+GDMFESV
Sbjct: 65 FKEVQELVDVGGGVGSTLNLIVSRYPHISAINFDIPHVVADAPHYPAVKHVSGDMFESVP 244
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
S AVF+K I+HDW D C K+LKNC KA+P +G +++ I+ A +S
Sbjct: 245 SGQAVFMKWILHDWSDDHCRKLLKNCHKALPEKGKVIVVDTILPVAAETS 394
>gb|DR386464.1|DR386464 RTHG1_15_H04.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_15_H04_A029 3', mRNA sequence
Length = 805
Score = 121 bits (258), Expect(2) = 3e-029
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ I++LVDVGGG G A I +A PH+ DLP+V+A AP V+++ G++FES
Sbjct: 87 FKDINTLVDVGGGRGEALSLIIEAHPHIRAINFDLPHVIATAPTLPGVQHMTGNLFESAP 266
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
SADA+F+K+ +H W D DC+K+L NC +A+P +G ++
Sbjct: 267 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDKGKLIL 380
Score = 27.6 bits (54), Expect(2) = 3e-029
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGT 515
G ER ++W ++ AGF+ KI+ GT
Sbjct: 471 GGERTRKQWNDLLQAAGFSISKIVGRNGT 557
>gb|DR090448.1|DR090448 RTAL1_15_D01.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_15_D01_A029 3', mRNA sequence
Length = 721
Score = 121 bits (258), Expect(2) = 3e-029
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ I++LVDVGGG G A I +A PH+ DLP+V+A AP V+++ G++FES
Sbjct: 82 FKDINTLVDVGGGRGEALSLIIEAHPHIRAINFDLPHVIATAPTLPGVQHMTGNLFESAP 261
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
SADA+F+K+ +H W D DC+K+L NC +A+P +G ++
Sbjct: 262 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDKGKLIL 375
Score = 27.6 bits (54), Expect(2) = 3e-029
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGT 515
G ER ++W ++ AGF+ KI+ GT
Sbjct: 466 GGERTRKQWNDLLQAAGFSISKIVGRNGT 552
>gb|AF119225.1|AF119225 Pinus radiata caffeic acid ortho-methyltransferase (cOMT) gene,
complete cds
Length = 1644
Score = 57.9 bits (120), Expect(4) = 7e-029
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +3 / +1
Query: 246 IIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRK 380
I+HDW D DC+KILKNC+KAIP G +I+ ++ + D+K
Sbjct: 1165 IMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKK 1299
Score = 49.6 bits (102), Expect(4) = 7e-029
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +1
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
G ER E+EWK+I+ E GF+ Y II + +S+IE P
Sbjct: 1369 GKERSEKEWKRILLEGGFSRYNIIEIPALQSVIEAFP 1479
Score = 47.3 bits (97), Expect(4) = 7e-029
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGA 164
F ++SLVDVGGG G A I +A+P + DLP+VVA A
Sbjct: 622 FHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATA 747
Score = 35.0 bits (70), Expect(4) = 7e-029
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3 / +3
Query: 180 VKYVAGDMFESVSSADAVFLK 242
V++V GDMFE+V + DA+F+K
Sbjct: 1011 VQHVGGDMFETVPTGDAIFMK 1073
>gb|BX254093.1|BX254093 BX254093 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP093C03, mRNA sequence
Length = 523
Score = 126 bits (270), Expect = 2e-028
Identities = 50/110 (45%), Positives = 71/110 (64%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ + LVDVGGG G I +PH+ D+P+VVA AP AVK+V GDMF+SV
Sbjct: 145 FKEVQELVDVGGGVGSTLNLIVSKYPHISGINFDMPHVVADAPHYPAVKHVGGDMFDSVP 324
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
S A+F+K I+HDW D C+++LKNC KA+P +G +++ I+ A +S
Sbjct: 325 SGQAIFMKWILHDWSDDHCLRLLKNCHKALPEKGKVIVVDTILPVAAETS 474
>gb|CX714803.1|CX714803 RTPQ1_27_C08.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_27_C08_A032 3', mRNA sequence
Length = 718
Score = 118 bits (252), Expect(2) = 2e-028
Identities = 44/95 (46%), Positives = 66/95 (69%)
Frame = +3 / +3
Query: 48 ISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSAD 227
I++LVDVGGG G A I +A PH+ DLP+V+A AP V+++ G++FES SAD
Sbjct: 9 INTLVDVGGGRGEALSLIIEAHPHIRAINFDLPHVIATAPTLPGVQHMTGNLFESAPSAD 188
Query: 228 AVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
A+F+K+ +H W D DC+K+L NC +A+P +G ++
Sbjct: 189 AIFMKNFLHSWNDEDCIKLLNNCHQALPDKGKLIL 293
Score = 27.6 bits (54), Expect(2) = 2e-028
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGT 515
G ER ++W ++ AGF+ KI+ GT
Sbjct: 384 GGERTRKQWNDLLQAAGFSISKIVGRNGT 470
>gb|CO175244.1|CO175244 NDL1_53_A11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_53_A11_A029 5', mRNA sequence
Length = 760
Score = 119 bits (254), Expect(2) = 4e-028
Identities = 43/98 (43%), Positives = 67/98 (68%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ +++LVD+GGG G A I A+PH+ DLP V+A AP V++++G +FE+
Sbjct: 308 FKDVNTLVDLGGGHGEALSLIIDAYPHIRAINFDLPQVIATAPTLPGVQHISGSLFETAP 487
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
SADA+F+K+ +H W D DC+K+L NC +A+P +G +I
Sbjct: 488 SADAIFIKNFLHIWDDQDCIKLLSNCYQAVPDKGKLII 601
Score = 25.8 bits (50), Expect(2) = 4e-028
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3 / +2
Query: 429 GVERDEREWKKIIFEAGFTSYKI 497
G ER ++W +++ AGF+ KI
Sbjct: 692 GRERTRKQWNELLKAAGFSLSKI 760
>gb|CO369886.1|CO369886 RTK1_55_A05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_55_A05_A029 3', mRNA sequence
Length = 808
Score = 124 bits (266), Expect = 6e-028
Identities = 49/110 (44%), Positives = 70/110 (63%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ + LVDVGGG G I +PH+ D+P+VV AP AVK+V GDMF+SV
Sbjct: 101 FKEVQELVDVGGGVGSTLNLIVSKYPHISGINFDMPHVVVDAPHYPAVKHVGGDMFDSVP 280
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
S A+F+K I+HDW D C+++LKNC KA+P +G +++ I+ A +S
Sbjct: 281 SGQAIFMKWILHDWSDDHCLRLLKNCHKALPEKGKVIVVDTILPVAAETS 430
>gb|CX652251.1|CX652251 COLD1_57_H09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_57_H09_A029 5', mRNA sequence
Length = 557
Score = 124 bits (266), Expect = 6e-028
Identities = 49/110 (44%), Positives = 70/110 (63%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ + LVDVGGG G I +PH+ D+P+VV AP AVK+V GDMF+SV
Sbjct: 86 FKEVQELVDVGGGVGSTLNLIVSKYPHISGINFDMPHVVVDAPHYPAVKHVGGDMFDSVP 265
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
S A+F+K I+HDW D C+++LKNC KA+P +G +++ I+ A +S
Sbjct: 266 SGQAIFMKWILHDWSDDHCLRLLKNCHKALPEKGKVIVVDTILPVAAETS 415
>gb|CX652979.1|CX652979 COLD1_62_D10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_D10_A029 5', mRNA sequence
Length = 828
Score = 124 bits (266), Expect = 6e-028
Identities = 49/110 (44%), Positives = 70/110 (63%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ + LVDVGGG G I +PH+ D+P+VV AP AVK+V GDMF+SV
Sbjct: 63 FKEVQELVDVGGGVGSTLNLIVSKYPHISGINFDMPHVVVDAPHYPAVKHVGGDMFDSVP 242
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
S A+F+K I+HDW D C+++LKNC KA+P +G +++ I+ A +S
Sbjct: 243 SGQAIFMKWILHDWSDDHCLRLLKNCHKALPEKGKVIVVDTILPVAAETS 392
>gb|DR167163.1|DR167163 RTPHOS1_17_D01.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_17_D01_A029 3', mRNA sequence
Length = 850
Score = 124 bits (266), Expect = 6e-028
Identities = 49/110 (44%), Positives = 70/110 (63%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ + LVDVGGG G I +PH+ D+P+VV AP AVK+V GDMF+SV
Sbjct: 122 FKEVQELVDVGGGVGSTLNLIVSKYPHISGINFDMPHVVVDAPHYPAVKHVGGDMFDSVP 301
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
S A+F+K I+HDW D C+++LKNC KA+P +G +++ I+ A +S
Sbjct: 302 SGQAIFMKWILHDWSDDHCLRLLKNCHKALPEKGKVIVVDTILPVAAETS 451
>gb|DR384933.1|DR384933 RTHG1_5_C09.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_5_C09_A029 5', mRNA sequence
Length = 789
Score = 124 bits (266), Expect = 6e-028
Identities = 46/98 (46%), Positives = 68/98 (69%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ I++LVDVGGG G A I KA PH+ DLP V+A AP V++++G++FES
Sbjct: 411 FKDINTLVDVGGGRGEALSLITKAHPHIRAINFDLPQVIATAPTIPGVQHISGNLFESAP 590
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
SADA+F+K+ +H W D DC+K+L NC +A+P +G ++
Sbjct: 591 SADAIFMKNFLHSWNDEDCIKLLNNCHQALPDKGKLIL 704
>gb|BX680279.1|BX680279 BX680279 RS Pinus pinaster cDNA clone RS41D07, mRNA sequence
Length = 649
Score = 116 bits (248), Expect(2) = 7e-028
Identities = 43/93 (46%), Positives = 64/93 (68%)
Frame = +3 / +2
Query: 54 SLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAV 233
+LVDVGGG G A I +A PH+ DLP V+A AP V++++G++FES SADA+
Sbjct: 2 TLVDVGGGRGEALNLIIEAHPHIRAINFDLPQVIATAPTIPGVQHMSGNLFESAPSADAI 181
Query: 234 FLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
F+K+ +H W D DC+K+L NC +A+P +G ++
Sbjct: 182 FMKNFLHSWNDEDCIKLLNNCHQALPDKGKLIL 280
Score = 27.6 bits (54), Expect(2) = 7e-028
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / +2
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGT 515
G ER ++W ++ AGF+ KI+ GT
Sbjct: 371 GGERTRKQWNDLLQAAGFSISKIVGRNGT 457
>gb|CX648030.1|CX648030 COLD1_26_C06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_26_C06_A029 3', mRNA sequence
Length = 820
Score = 123 bits (264), Expect = 1e-027
Identities = 51/105 (48%), Positives = 70/105 (66%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F +++LVDVGGG G A I K PH+ LDLP+V+A AP T VK++ G+MFE +
Sbjct: 144 FMSMATLVDVGGGMGSALSIIVKEHPHIRGINLDLPHVIATAPPITGVKHMEGNMFEHIP 323
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVG 353
SADAV +K I+HDW D +CVK+L+ A PA+G +I+ +V G
Sbjct: 324 SADAVMMKWILHDWADEECVKLLRRSYDATPAKGKVLIVEAVVEG 458
>gb|DR101310.1|DR101310 STRR1_72_B03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_72_B03_A033 3', mRNA sequence
Length = 734
Score = 123 bits (263), Expect = 2e-027
Identities = 50/105 (47%), Positives = 71/105 (67%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ +++LVDVGGG G A I K PH+ LDLP+V+A AP T V+++ G+MFE +
Sbjct: 65 FKSVATLVDVGGGMGSALSIIVKEHPHIRGINLDLPHVIATAPPITGVEHMEGNMFEHIP 244
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVG 353
SADAV +K I+HDW D +CVK+L+ A PA+G +I+ +V G
Sbjct: 245 SADAVMMKWILHDWADEECVKLLRRSYDATPAKGKVLIVEAVVEG 379
>gb|BG275493.1|BG275493 NXSI_139_D08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_139_D08 5' similar to Arabidopsis thaliana
sequence At5g54160 O-methyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 556
Score = 122 bits (262), Expect = 2e-027
Identities = 48/110 (43%), Positives = 69/110 (62%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ + LVDVGGG G I +PH+ D+P+VV AP AVK+V GDMF+SV
Sbjct: 164 FKEVQELVDVGGGVGSTLNLIVSKYPHISGINFDMPHVVVDAPHYPAVKHVGGDMFDSVP 343
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
S A+F+K I+HDW D C+++LKNC K +P +G +++ I+ A +S
Sbjct: 344 SGQAIFMKWILHDWSDDHCLRLLKNCHKXLPEKGKVIVVDTILPVAAETS 493
>gb|CO170118.1|CO170118 NDL1_11_F12.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_11_F12_A029 5', mRNA sequence
Length = 800
Score = 122 bits (261), Expect = 3e-027
Identities = 51/110 (46%), Positives = 69/110 (62%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ + LVDVGGG G I +PH+ DL +V+A AP AVK+VAGDMF+SV
Sbjct: 223 FKEVQELVDVGGGIGSTLNLIVSRYPHISGINFDLSHVLADAPHYPAVKHVAGDMFDSVP 402
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
S A+F+K I+HDW D C K+LKNC KA+P +G + + I+ A +S
Sbjct: 403 SGQAIFMKWILHDWSDDHCRKLLKNCHKALPEKGKVIAVDTILPVAAETS 552
>gb|CX646520.1|CX646520 COLD1_9_H01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_H01_A029 5', mRNA sequence
Length = 830
Score = 122 bits (261), Expect = 3e-027
Identities = 50/105 (47%), Positives = 71/105 (67%)
Frame = +3 / -2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ +++LVDVGGG G A I K PH+ LDLP+V+A AP T V+++ G+MFE +
Sbjct: 682 FKSMATLVDVGGGMGSALSIIVKEHPHIRGINLDLPHVIATAPLITGVEHMEGNMFEHIP 503
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVG 353
SADAV +K I+HDW D +CVK+L+ A PA+G +I+ +V G
Sbjct: 502 SADAVMMKWILHDWADEECVKLLRRSYDATPAKGKVLIVEAVVEG 368
>gb|CX652893.1|CX652893 COLD1_62_D10.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_D10_A029 3', mRNA sequence
Length = 737
Score = 122 bits (261), Expect = 3e-027
Identities = 48/107 (44%), Positives = 68/107 (63%)
Frame = +3 / +2
Query: 48 ISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSAD 227
+ LVDVGGG G I +PH+ D+P+VV AP AVK+V GDMF+SV S
Sbjct: 5 VQELVDVGGGVGSTLNLIVSKYPHISGINFDMPHVVVDAPHYPAVKHVGGDMFDSVPSGQ 184
Query: 228 AVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
A+F+K I+HDW D C+++LKNC KA+P +G +++ I+ A +S
Sbjct: 185 AIFMKWILHDWSDDHCLRLLKNCHKALPEKGKVIVVDTILPVAAETS 325
>gb|CX653031.1|CX653031 COLD1_63_A10.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_63_A10_A029 3', mRNA sequence
Length = 809
Score = 122 bits (261), Expect = 3e-027
Identities = 50/105 (47%), Positives = 71/105 (67%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ +++LVDVGGG G A I K PH+ LDLP+V+A AP T V+++ G+MFE +
Sbjct: 17 FKSMATLVDVGGGMGSALSIIVKEHPHIRGINLDLPHVIATAPLITGVEHMEGNMFEHIP 196
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVG 353
SADAV +K I+HDW D +CVK+L+ A PA+G +I+ +V G
Sbjct: 197 SADAVMMKWILHDWADEECVKLLRRSYDATPAKGKVLIVEAVVEG 331
>gb|DR020354.1|DR020354 STRS1_36_H04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_36_H04_A034 3', mRNA sequence
Length = 783
Score = 122 bits (261), Expect = 3e-027
Identities = 51/110 (46%), Positives = 69/110 (62%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ + LVDVGGG G I +PH+ DL +V+A AP AVK+VAGDMF+SV
Sbjct: 42 FKEVQELVDVGGGIGSTLNLIVSRYPHISGINFDLSHVLADAPHYPAVKHVAGDMFDSVP 221
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
S A+F+K I+HDW D C K+LKNC KA+P +G + + I+ A +S
Sbjct: 222 SGQAIFMKWILHDWSDDHCRKLLKNCHKALPEKGKVIAVDTILPVAAETS 371
>gb|DR025455.1|DR025455 STRS1_71_E09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_71_E09_A034 5', mRNA sequence
Length = 665
Score = 122 bits (261), Expect = 3e-027
Identities = 50/105 (47%), Positives = 71/105 (67%)
Frame = +3 / -3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ +++LVDVGGG G A I K PH+ LDLP+V+A AP T V+++ G+MFE +
Sbjct: 513 FKSVATLVDVGGGMGSALSIIVKEHPHIRGINLDLPHVIATAPPITGVEHMEGNMFEHIP 334
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVG 353
SADAV +K I+HDW D +CVK+L+ A PA+G +I+ +V G
Sbjct: 333 SADAVMMKWILHDWPDEECVKLLRRSYDATPAKGKVLIVEAVVEG 199
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 372,209,866
Number of Sequences: 355925
Number of extensions: 4892702
Number of successful extensions: 38079
Number of sequences better than 1.0e-020: 104
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 11376623095
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)