TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437739.2.2
(2231 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR694469.1|DR694469 EST1084561 Normalized pine embryo li... 440 e-122
gb|CF475218.1|CF475218 RTWW2_14_H06.g1_A021 Well-watered lo... 439 e-122
gb|DR024240.1|DR024240 STRS1_63_B11.g1_A034 Shoot tip pitch... 432 e-120
gb|CF666460.1|CF666460 RTCNT1_23_A10.g1_A029 Root control P... 410 e-113
gb|DR682125.1|DR682125 EST1072200 Normalized pine embryo li... 407 e-113
gb|DR683953.1|DR683953 EST1074029 Normalized pine embryo li... 311 e-112
gb|DR068751.1|DR068751 RTDK1_2_E04.g1_A029 Roots, dark Pinu... 403 e-111
gb|DR024206.1|DR024206 STRS1_63_B11.b1_A034 Shoot tip pitch... 400 e-110
gb|CF671079.1|CF671079 RTCNT1_54_C10.g1_A029 Root control P... 399 e-110
gb|DT638708.1|DT638708 EST1153639 Normalized pine embryo li... 399 e-110
gb|DR099434.1|DR099434 STRR1_55_C05.g1_A033 Stem Response R... 369 e-101
gb|DT631864.1|DT631864 EST1146795 Normalized pine embryo li... 311 e-100
gb|DR099170.1|DR099170 STRR1_53_D05.g1_A033 Stem Response R... 352 6e-096
gb|DR018410.1|DR018410 STRS1_22_G03.g1_A034 Shoot tip pitch... 273 5e-093
gb|CO363132.1|CO363132 RTK1_7_G05.g1_A029 Roots minus potas... 337 1e-091
gb|DR056258.1|DR056258 RTCA1_29_C09.b1_A029 Roots minus cal... 330 2e-089
gb|CO162180.1|CO162180 FLD1_33_D11.g1_A029 Root flooded Pin... 321 1e-086
gb|BX680507.1|BX680507 BX680507 RS Pinus pinaster cDNA clon... 311 1e-083
gb|DR056330.1|DR056330 RTCA1_29_C09.g1_A029 Roots minus cal... 306 5e-082
gb|DR013884.1|DR013884 HEAT1_22_D06.b1_A029 Root at 37 C fo... 304 2e-081
gb|CF671009.1|CF671009 RTCNT1_54_C10.b1_A029 Root control P... 294 1e-078
gb|DR055806.1|DR055806 RTCA1_26_B12.b1_A029 Roots minus cal... 274 2e-072
gb|DR169238.1|DR169238 RTPHOS1_31_B02.b1_A029 Roots minus p... 270 4e-071
dbj|BD224350.1| Materials and methods for the modification ... 270 4e-071
dbj|BD224413.1| Materials and methods for the modification ... 270 4e-071
gb|DR018345.1|DR018345 STRS1_22_G03.b1_A034 Shoot tip pitch... 254 2e-070
gb|DR100370.1|DR100370 STRR1_63_D08.g1_A033 Stem Response R... 248 8e-065
dbj|BD224352.1| Materials and methods for the modification ... 243 3e-063
dbj|BD224415.1| Materials and methods for the modification ... 243 3e-063
gb|DR099098.1|DR099098 STRR1_53_D05.b1_A033 Stem Response R... 237 2e-061
gb|DR099363.1|DR099363 STRR1_55_C05.b1_A033 Stem Response R... 236 4e-061
gb|AW754572.1|AW754572 PC03H01 Pine TriplEx pollen cone lib... 230 3e-059
gb|BE431385.1|BE431385 NXNV_181_F03_F Nsf Xylem Normal wood... 215 7e-055
gb|BF516660.1|BF516660 NXSI_001_G06_F NXSI (Nsf Xylem Side ... 212 9e-054
gb|AW290744.1|AW290744 NXNV046D07F Nsf Xylem Normal wood Ve... 207 2e-052
gb|CD027404.1|CD027404 NXNV046D07 Nsf Xylem Normal wood Ver... 207 2e-052
gb|DR169308.1|DR169308 RTPHOS1_31_B02.g1_A029 Roots minus p... 160 4e-052
gb|BE762088.1|BE762088 NXCI_076_H01_F NXCI (Nsf Xylem Compr... 193 3e-048
gb|CF666393.1|CF666393 RTCNT1_23_A10.b1_A029 Root control P... 191 2e-047
gb|DR068670.1|DR068670 RTDK1_2_E04.b1_A029 Roots, dark Pinu... 187 3e-046
gb|BF518339.1|BF518339 NXSI_038_B12_F NXSI (Nsf Xylem Side ... 169 6e-041
gb|CO162092.1|CO162092 FLD1_33_D11.b1_A029 Root flooded Pin... 167 2e-040
gb|AW064907.1|AW064907 ST37C08 Pine TriplEx shoot tip libra... 144 3e-033
gb|AW064668.1|AW064668 ST34C05 Pine TriplEx shoot tip libra... 86 1e-024
gb|CF477873.1|CF477873 RTWW3_13_H10.g1_A022 Well-watered lo... 103 6e-021
>gb|DR694469.1|DR694469 EST1084561 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEC87 3' end, mRNA sequence
Length = 838
Score = 440 bits (954), Expect = e-122
Identities = 182/279 (65%), Positives = 209/279 (74%)
Frame = +3 / +1
Query: 816 GDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFSTVMISYSSWNGLKMHANHNLIT 995
GDGGT GINENNT+ L +HM Y+DAL KG ST+M SYSSWNG+KMHA+H L+T
Sbjct: 1 GDGGTTGGINENNTVASYYDLYRVHMLPYVDALAKGVSTIMASYSSWNGVKMHASHYLLT 180
Query: 996 GFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVPNNYQNFITILT 1175
LKDR+ F+GF ISDWE IDR+TSPPGANYSYS+ ASI AG+DM+MVP N+Q +I LT
Sbjct: 181 RILKDRMGFKGFIISDWEAIDRITSPPGANYSYSISASINAGIDMVMVPFNFQTYIDELT 360
Query: 1176 GHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSL 1355
VNS +I MSRIDDAV RILRVKF GLFE+P D SL +G HR+LAREAVRKSL
Sbjct: 361 ALVNSNVISMSRIDDAVRRILRVKFVAGLFEHPKTDRSLLGMVGNLAHRELAREAVRKSL 540
Query: 1356 VLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDA 1535
VLLKNGK PLLPL KKA +ILVAGSHADNLGYQCGGWTI W+G LDA
Sbjct: 541 VLLKNGKMPGKPLLPLDKKAPKILVAGSHADNLGYQCGGWTISWEGGSGATTVGTTILDA 720
Query: 1536 VKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPY 1652
+K AV PSTEVV+ ++PDA F + GFSYAI +GE PY
Sbjct: 721 IKQAVSPSTEVVYEQNPDANFTKGKGFSYAIAVIGEPPY 837
Score = 204 bits (441), Expect(3) = 7e-059
Identities = 105/192 (54%), Positives = 120/192 (62%)
Frame = -2 / -3
Query: 1480 IVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSCFPS 1301
IVHPPHWYPRLSA LPAT I AFL RG++G PF T DLRTAS A SLC+ P+
Sbjct: 665 IVHPPHWYPRLSA*LPATSIFGAFLSRGNNGFPGIFPFFKRTRDLRTASLASSLCARLPT 486
Query: 1300 WSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMIMSR 1121
+ S G SN+P NLT RI TASSI L+ I FT V M W L GT+ MS
Sbjct: 485 MPNKERSVFGCSNKPATNLTLRILRTASSIRLMEITLEFTRAVSSSM*VWKLKGTITMSI 306
Query: 1120 PARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE*E 941
PA IEA * *FAPGG V LS+ SQSE++ P LS + V R WLACI +PFQLE*+
Sbjct: 305 PALIEAEIL*L*FAPGGEVILSIASQSEMMNPLNPILSFKMRVRR*WLACIFTPFQLE*D 126
Query: 940 IMTVEKPLRSAS 905
M V+ P AS
Sbjct: 125 AMMVDTPFAKAS 90
Score = 39.1 bits (79), Expect(3) = 7e-059
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -2 / -3
Query: 1648 GCSPTATIAYEKPPLLTNSASGLSANTTSVDGSTAAFTA 1532
G SP +A E P L ASG + TTSVDG TA F A
Sbjct: 833 GGSPITAMA*ENPFPLVKFASGFCSYTTSVDGLTACFMA 717
Score = 24.4 bits (47), Expect(3) = 7e-059
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / -3
Query: 856 VLFSLMPFCVPPS 818
VLFSL+P VPPS
Sbjct: 41 VLFSLIPPVVPPS 3
>gb|CF475218.1|CF475218 RTWW2_14_H06.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_14_H06_A021 5', mRNA sequence
Length = 777
Score = 439 bits (952), Expect = e-122
Identities = 179/258 (69%), Positives = 208/258 (80%)
Frame = +3 / +3
Query: 1191 GLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKN 1370
GLI MSRI+DAV RILRVKFTMGLFE+PM +PSL +QLG + HR+LAREAVRKSLVLLKN
Sbjct: 3 GLISMSRINDAVRRILRVKFTMGLFEHPMANPSLVNQLGNKVHRELAREAVRKSLVLLKN 182
Query: 1371 GKPGDAPLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAV 1550
GK PLLPL K AA+ILVAG+HADNLGYQCGGWTI WQG L+A+K+ V
Sbjct: 183 GKSASKPLLPLNKNAAKILVAGTHADNLGYQCGGWTITWQGLSGNSTKGTTILEAIKSTV 362
Query: 1551 DPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAA 1730
PSTEVV+ E+PDA++V GFSYAIV VGE PY ET GD++NLTIP G T++ VC +
Sbjct: 363 SPSTEVVYQENPDAKYVEGQGFSYAIVLVGEAPYAETFGDNLNLTIPLGGADTIKNVCGS 542
Query: 1731 VRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSV 1910
V+C+ +LISGRP+VI+P+L +DA VAAWLPGT GQGVTDV+FGD GF GKL RTWF+SV
Sbjct: 543 VKCLVILISGRPLVIEPYLPLIDAFVAAWLPGTXGQGVTDVIFGDQGFRGKLSRTWFKSV 722
Query: 1911 DQLPMNYGDAHYDPLFPL 1964
DQLPMN GD HYDPLFPL
Sbjct: 723 DQLPMNVGDKHYDPLFPL 776
Score = 158 bits (340), Expect(2) = 4e-071
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -2 / -3
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGS ST LNHV SFP+ P*SP TSVTPWPSVPGSQAAT AS+ R G IT+G
Sbjct: 754 CLSPTFIGS*STLLNHVLESFPLKP*SPKITSVTPWPSVPGSQAATKASINGR*GSITSG 575
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P + H T HT V P GIV+ LSP VS G SPT T+AYE P T ASG
Sbjct: 574 LPDIKITRHFTEPHTFLIVSAPPKGIVKLRLSPNVSA*GASPTRTMAYENPCPSTYFASG 395
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV+G T A
Sbjct: 394 FS**TTSVEGLTVDLIA 344
Score = 132 bits (282), Expect(2) = 4e-071
Identities = 59/100 (59%), Positives = 66/100 (66%)
Frame = -2 / -3
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
C IVHPPH PRLSAW+PATRI AAFL +GS G PF +ST D TAS A SLC+
Sbjct: 301 CQVIVHPPH**PRLSAWVPATRIFAAFLFKGSKGLLADFPFFNSTRDFLTASLANSLCTL 122
Query: 1309 FPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRP 1190
PSW RLG MG S PMVN T +I TAS IL + I+P
Sbjct: 121 LPSWLTRLGLAMGCSKSPMVNFTLKILRTASFILDMEIKP 2
>gb|DR024240.1|DR024240 STRS1_63_B11.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_63_B11_A034 5', mRNA sequence
Length = 864
Score = 432 bits (937), Expect = e-120
Identities = 177/287 (61%), Positives = 221/287 (77%)
Frame = +3 / +2
Query: 969 MHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVPNN 1148
MHAN LI+ LK +L F+GF ISDWEGIDR+TSPP ANYS S+ S+ AG+DM+M+P N
Sbjct: 2 MHANRFLISHVLKKQLGFKGFVISDWEGIDRITSPPDANYSLSILESVGAGIDMVMLPYN 181
Query: 1149 YQNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDL 1328
+ F+ LT V G I MSRI+DAV RILRVKF MGLFE P+ +PSLA+QLG +EHR+L
Sbjct: 182 FTYFMGNLTSQVKGGFISMSRINDAVRRILRVKFAMGLFEQPLANPSLANQLGSKEHREL 361
Query: 1329 AREAVRKSLVLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXX 1508
AREAVRKSLVLLKNGK + PLLPL K A++ILV G+HADNLGYQCGGWTIEWQG
Sbjct: 362 AREAVRKSLVLLKNGKSTNNPLLPLNKNASKILVVGTHADNLGYQCGGWTIEWQGLSGNS 541
Query: 1509 XXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTI 1688
L+A+K AV ST+VV+ ++PDA++V+ GFSYAIV +GE PY E GD++NLTI
Sbjct: 542 TIGTTFLEAIKLAVSSSTKVVYKKNPDADYVKGKGFSYAIVVIGEAPYAEYYGDNLNLTI 721
Query: 1689 PDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGT 1829
P G T++ VC +++C+ +LISGRP+VI+P+L +DA VAAWLPGT
Sbjct: 722 PLSGGDTIKNVCGSLKCLVILISGRPLVIKPYLPLVDAFVAAWLPGT 862
Score = 184 bits (397), Expect(2) = 3e-063
Identities = 94/174 (54%), Positives = 111/174 (63%)
Frame = -2 / -1
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
CHSIVHPPH PRLSA +P TRIL AFL +GS G PF ++T D TAS A SLCS
Sbjct: 522 CHSIVHPPH**PRLSA*VPTTRILEAFLFKGSKGLFVDFPFFNNTRDFLTASLANSLCSL 343
Query: 1309 FPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMI 1130
PSW ARLG G S P+ N T +I TAS ILL+ ++P T VR+ +K+ L G++
Sbjct: 342 LPSWLARLGLARGCSKSPIANFTLKILRTASFILLMEMKPPLTCEVRLPIKYVKL*GSIT 163
Query: 1129 MSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACI 968
MS PA + + E* A GGLV LS+PSQSEI KP K S LR MR LACI
Sbjct: 162 MSIPAPTLSKIDKE*LASGGLVILSIPSQSEITKPLKPSCFLRT*EMRNRLACI 1
Score = 79.4 bits (167), Expect(2) = 3e-063
Identities = 47/100 (47%), Positives = 52/100 (52%)
Frame = -2 / -1
Query: 1831 SVPGSQAATTASMAPRNGCITTGRPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSV 1652
SVPGS AAT AS R G IT+G P + H T V P G+V+ LSP S
Sbjct: 864 SVPGSHAATKASTNGR*GLITSGLPDIKITRHFKDPQTFLIVSPPLKGMVKLRLSP*YSA 685
Query: 1651 YGCSPTATIAYEKPPLLTNSASGLSANTTSVDGSTAAFTA 1532
G SP TIAYE P LT SASG TT V+ TA A
Sbjct: 684 *GASPITTIAYENPFPLT*SASGFFL*TTLVEELTANLIA 565
>gb|CF666460.1|CF666460 RTCNT1_23_A10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_23_A10_A029 5', mRNA sequence
Length = 780
Score = 410 bits (889), Expect = e-113
Identities = 166/260 (63%), Positives = 205/260 (78%)
Frame = +3 / +1
Query: 819 DGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFSTVMISYSSWNGLKMHANHNLITG 998
+G GINENNT+I +GL+ IHM AY DA+ KG STVM+SYSSWNG KMHAN L++
Sbjct: 1 EGRKTEGINENNTVISYKGLVHIHMAAYFDAIAKGVSTVMVSYSSWNGRKMHANRFLVSR 180
Query: 999 FLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVPNNYQNFITILTG 1178
LK +L F+GF ISDW+GIDR+TSP GANYS SV + AG+DM+MVP N+++FI L+
Sbjct: 181 VLKKQLGFKGFVISDWQGIDRITSPAGANYSLSVFDGVSAGIDMVMVPYNFKDFINDLSS 360
Query: 1179 HVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLV 1358
V SGLIPM+RI+DAV RILRVKFTMGLFE+P+ +PSLA+QLG +EHR+LAREAVRKSLV
Sbjct: 361 QVKSGLIPMTRINDAVRRILRVKFTMGLFEHPLSNPSLANQLGSKEHRELAREAVRKSLV 540
Query: 1359 LLKNGKPGDAPLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAV 1538
LLKNGK + PLLPL K A+++LVAG+H DNLGYQCGGWT+EWQG L+A+
Sbjct: 541 LLKNGKSANKPLLPLEKNASKVLVAGTHPDNLGYQCGGWTMEWQGLSGNITVGTTILEAI 720
Query: 1539 KAAVDPSTEVVFAESPDAEF 1598
K AV PSTEVV+ ++PDA +
Sbjct: 721 KLAVSPSTEVVYEQNPDANY 780
Score = 271 bits (587), Expect = 1e-071
Identities = 137/257 (53%), Positives = 157/257 (61%)
Frame = -2 / -2
Query: 1591 ASGLSANTTSVDGSTAAFTAXXXXXXXXXXXXXPCHSIVHPPHWYPRLSAWLPATRILAA 1412
ASG + TTSV+G TA+ A PCHSIVHPPH PRLS W+PATR L A
Sbjct: 773 ASGFCS*TTSVEGLTASLIASRIVVPTVMFPLNPCHSIVHPPH**PRLSGWVPATRTLEA 594
Query: 1411 FLGRGSSGASPGLPFLSSTSDLRTASRARSLCSCFPSWSARLGSGMGFSNRPMVNLTRRI 1232
F +GS G PF ++T D TAS A SLCS PSW ARLG G SN PMVN T I
Sbjct: 593 FFSKGSKGLLADFPFFNNTKDFLTASLANSLCSLLPSWLARLGLLRGCSNSPMVNFTLNI 414
Query: 1231 RVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGLVTLSM 1052
+TAS IL++GI+PLFT R +MK L GT+ MS PA + T+ E* AP GLV LS+
Sbjct: 413 LLTASFILVMGIKPLFTCEDRSLMKSLKL*GTITMSIPALTPSKTDKE*LAPAGLVILSI 234
Query: 1051 PSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWMLIRP 872
P QSEI KP K S LR R ACI PFQLE*E +TVE PL AS+*A MWM P
Sbjct: 233 PCQSEITKPLKPSCFLRTRETRKRFACIFRPFQLE*ETITVETPLAMASK*AAMWMCTNP 54
Query: 871 CRSMMVLFSLMPFCVPP 821
+ VLFSL+P P
Sbjct: 53 L*LITVLFSLIPSVFRP 3
>gb|DR682125.1|DR682125 EST1072200 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA729, mRNA sequence
Length = 896
Score = 407 bits (883), Expect(2) = e-113
Identities = 161/235 (68%), Positives = 190/235 (80%)
Frame = +3 / -1
Query: 1275 MPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPLPKKAARILVAGSHADNL 1454
M DPSLA+QLG +EHR+LAREAVRKSLVLLKNGK PLLPL K A +ILVAG+H DNL
Sbjct: 860 MADPSLANQLGSKEHRELAREAVRKSLVLLKNGKSASKPLLPLDKNAPKILVAGTHPDNL 681
Query: 1455 GYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVA 1634
GYQCGGWTIEWQG L+A+K +V PST+VV+ ++PDA +V+ GFSYAIV
Sbjct: 680 GYQCGGWTIEWQGLSGNSTIGTTILEAIKFSVSPSTDVVYQQNPDANYVKGQGFSYAIVV 501
Query: 1635 VGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAA 1814
VGE PY E KGD+ NLTIP G T++ VC +++C+ +LISGRP+VI+P+L +DA VAA
Sbjct: 500 VGEAPYAEMKGDNFNLTIPLSGGDTIKNVCGSLKCLVILISGRPLVIEPYLPLVDAFVAA 321
Query: 1815 WLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGFGLT 1979
WLPGTEGQGVTDV+FGD+GF GKLPRTWF+SVDQLPMN GD HYDPLFPLGFGLT
Sbjct: 320 WLPGTEGQGVTDVIFGDHGFQGKLPRTWFKSVDQLPMNVGDKHYDPLFPLGFGLT 156
Score = 149 bits (320), Expect(2) = 2e-061
Identities = 75/132 (56%), Positives = 81/132 (61%)
Frame = -2 / +1
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIG+ ST LNHV GSFP NP*SP TSVTPWPSVPGS AAT AS R G IT G
Sbjct: 193 CLSPTFIGN*STLLNHVLGSFP*NP*SPKITSVTPWPSVPGSHAATKASTNGR*GSITRG 372
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P ++ H T V P GIV+ LSP +S G SPT TIAYE P T ASG
Sbjct: 373 LPDINITRHFKEPQTFLIVSPPLKGIVKLKLSPFISA*GASPTTTIAYENPCPFT*LASG 552
Query: 1582 LSANTTSVDGST 1547
TTSV+G T
Sbjct: 553 FC**TTSVEGLT 588
Score = 108 bits (231), Expect(2) = 2e-061
Identities = 47/78 (60%), Positives = 51/78 (65%)
Frame = -2 / +1
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
CHSIVHPPH PRLS +PATRIL AFL RGS G PF ++T D TAS A SLCS
Sbjct: 646 CHSIVHPPH**PRLSG*VPATRILGAFLSRGSKGLLADFPFFNNTRDFLTASLANSLCSL 825
Query: 1309 FPSWSARLGSGMGFSNRP 1256
PSW ARLGS + P
Sbjct: 826 LPSWLARLGSAIDVQRVP 879
Score = 22.6 bits (43), Expect(2) = e-113
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / -2
Query: 1245 KFTMGLFEN 1271
KFTMGLFE+
Sbjct: 889 KFTMGLFEH 863
>gb|DR683953.1|DR683953 EST1074029 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAN27 3' end, mRNA sequence
Length = 896
Score = 311 bits (673), Expect(2) = e-112
Identities = 125/181 (69%), Positives = 145/181 (80%)
Frame = +3 / +3
Query: 201 YQDASKDVEVRVRDLLARMTLAEKVGQMTQIERIVASPQALRDYYIXXXXXXXXXVPRKQ 380
Y+D S+ + RV DLLARMTLAEK+GQMTQIER VA+ +++YYI VP +
Sbjct: 153 YKDPSQPINARVEDLLARMTLAEKIGQMTQIERSVATADVMKNYYIGSVLSGGGSVPAPK 332
Query: 381 ATAAEWVAMVSDFQKACLSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLV 560
A+ W+ +V QK LSTRL IPM+YGIDAVHGHNNVYGATIFPHNVGLGATRDP+L
Sbjct: 333 ASPDTWINLVDGLQKGALSTRLQIPMMYGIDAVHGHNNVYGATIFPHNVGLGATRDPDLA 512
Query: 561 KRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDV 740
+RIGAATALEVRATGIQY FAPC+AVCRDPRWGRCYESYSED +IV+AMT++I GLQG
Sbjct: 513 RRIGAATALEVRATGIQYVFAPCVAVCRDPRWGRCYESYSEDPKIVKAMTKIISGLQGQA 692
Query: 741 P 743
P
Sbjct: 693 P 695
Score = 158 bits (339), Expect(3) = 1e-040
Identities = 76/130 (58%), Positives = 83/130 (63%)
Frame = -2 / -2
Query: 754 VKFCGTSPCRPGMSSVMACTIRWXXXXXX*HRPHLGSRHTAMHGANAYWMPVALTSSAVA 575
+ F G PCRP + VMA TI * RPH GS TA HGAN Y MPVALTS AVA
Sbjct: 706 IPFVGACPCRPEIIFVMALTIFGSSL*LS*QRPHRGSLQTATHGANTY*MPVALTSKAVA 527
Query: 574 APILFTRFGSLVAPRPTLWGKMVAPYTLLWPWTASMP*IIGMPRRVDRHAFWKSLTMATH 395
APIL + GSLVAP PTL GKMVAP TLLWP TAS+P I+G+ RRVDR FW T H
Sbjct: 526 APILLAKSGSLVAPSPTL*GKMVAP*TLLWPCTASIPYIMGI*RRVDRAPFWSPSTKLIH 347
Query: 394 SAAVACFRGT 365
+ A GT
Sbjct: 346 VSGDALGAGT 317
Score = 117 bits (250), Expect(2) = e-112
Identities = 45/67 (67%), Positives = 55/67 (82%)
Frame = +3 / +3
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
T G+PF AG+ VAACAKHFVGDGGT +GINENNT+I+ +GL+ IHM Y DA+ +G ST
Sbjct: 696 TKGIPFMAGQSNVAACAKHFVGDGGTTDGINENNTVINYKGLVKIHMAPYFDAIARGVST 875
Query: 933 VMISYSS 953
+MISYSS
Sbjct: 876 IMISYSS 896
Score = 97.3 bits (206), Expect(2) = 1e-024
Identities = 44/74 (59%), Positives = 48/74 (64%)
Frame = -2 / -2
Query: 952 LE*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPA 773
LE*EI+ VE PL AS+* MW+ P M VLFSLMP VPPSPTKCLA AAT PA
Sbjct: 895 LE*EIIMVETPLAMASK*GAMWIFTNPL*LMTVLFSLMPSVVPPSPTKCLAQAATFDCPA 716
Query: 772 AKGMPLVKFCGTSP 731
KG+P V C P
Sbjct: 715 IKGIPFVGACPCRP 674
Score = 37.7 bits (76), Expect(2) = 1e-024
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3 / -3
Query: 729 AGPG*AQSWPARYGGPRCSSRSTGPTSDHGTPQCMARTRTGCR 601
A P *+ SWP ++ PR SS S+GP D Q +TR C+
Sbjct: 681 ADPR*SLSWP*QFLDPRYSSHSSGPIEDLCKQQHTEQTRIECQ 553
Score = 32.7 bits (65), Expect(3) = 1e-040
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1 / -1
Query: 950 GVGDHDGGEALAERVQVGRHVDAY 879
G+ +H+GG+A +++G HVD Y
Sbjct: 893 GIRNHNGGDASGNGIKIGGHVDFY 822
Score = 23.5 bits (45), Expect(3) = 1e-040
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1 / -1
Query: 263 QRHPRQQVPDADLHVLAGVLV 201
Q HPRQQV + L VLV
Sbjct: 215 QSHPRQQVLHTSIDGLRWVLV 153
>gb|DR068751.1|DR068751 RTDK1_2_E04.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_2_E04_A029 5', mRNA sequence
Length = 780
Score = 403 bits (875), Expect = e-111
Identities = 166/257 (64%), Positives = 199/257 (77%)
Frame = +3 / +2
Query: 789 VAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFSTVMISYSSWNGLK 968
VAACAKHFVGDGGT GI+ENNT+ + L++ HM Y DA+ KG ST+M+SYSSWNG+K
Sbjct: 8 VAACAKHFVGDGGTTKGIDENNTVSSYKRLVNTHMAPYFDAIAKGVSTIMVSYSSWNGVK 187
Query: 969 MHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVPNN 1148
MHAN LI+ LK +L F+GF ISDWEGIDR+TSPP ANYS S+ S+ AG+DM+M+P N
Sbjct: 188 MHANRFLISHVLKKQLGFKGFVISDWEGIDRITSPPDANYSLSILESVGAGIDMVMLPYN 367
Query: 1149 YQNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDL 1328
+ F+ LT V G IP+SRI+DAV RILRVKFTMGLFE P+ +PSLA+QLG +EHR+L
Sbjct: 368 FTYFMGNLTSQVKGGFIPISRINDAVRRILRVKFTMGLFEQPLANPSLANQLGSKEHREL 547
Query: 1329 AREAVRKSLVLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXX 1508
AREAVRKSLVLLKNGK + PLLPL K A++ILV G+HADNLGYQCGGWTIEWQG
Sbjct: 548 AREAVRKSLVLLKNGKSMNNPLLPLNKNASKILVVGTHADNLGYQCGGWTIEWQGLSGNS 727
Query: 1509 XXXXXXLDAVKAAVDPS 1559
L+A+K AV S
Sbjct: 728 TIGTTFLEAIKLAVSSS 778
Score = 256 bits (554), Expect = 4e-067
Identities = 129/234 (55%), Positives = 153/234 (65%)
Frame = -2 / -1
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
CHSIVHPPH PRLSA +P TRIL AFL +GS G PF ++T D TAS A SLCS
Sbjct: 708 CHSIVHPPH**PRLSA*VPTTRILEAFLFKGSKGLFIDFPFFNNTRDFLTASLANSLCSL 529
Query: 1309 FPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMI 1130
PSW ARLG G S P+VN T +I TAS ILL+G++P T VR+ +K+ L G++
Sbjct: 528 LPSWLARLGLARGCSKSPIVNFTLKILRTASFILLMGMKPPLTCEVRLPIKYVKL*GSIT 349
Query: 1129 MSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQL 950
MS PA + + E* A GGLV LS+PSQSEI KP K S LR MR LACI +PFQL
Sbjct: 348 MSIPAPTLSKIDKE*LASGGLVILSIPSQSEITKPLKPSCFLRT*EMRNRLACIFTPFQL 169
Query: 949 E*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAAT 788
E*+ + VE PL AS+* M +L + VLFS +P VPPSPTKCLA AAT
Sbjct: 168 E*DTIMVETPLAMASK*GAM*VLTNLL*LLTVLFSSIPLVVPPSPTKCLAQAAT 7
>gb|DR024206.1|DR024206 STRS1_63_B11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_63_B11_A034 3', mRNA sequence
Length = 869
Score = 400 bits (868), Expect = e-110
Identities = 158/234 (67%), Positives = 192/234 (82%)
Frame = +3 / +2
Query: 1281 DPSLADQLGKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGY 1460
+PSLA+QLG +EHR+LAREAVRKSLVLLKNGK + PLLPL K A++ILV G+HADNLGY
Sbjct: 2 NPSLANQLGSKEHRELAREAVRKSLVLLKNGKSTNNPLLPLNKNASKILVVGTHADNLGY 181
Query: 1461 QCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVG 1640
QCGGWTIEWQG L+A+K AV ST+VV+ ++PDA++V+ GFSYAIV +G
Sbjct: 182 QCGGWTIEWQGLSGNSTIGTTFLEAIKLAVSSSTKVVYKKNPDADYVKGKGFSYAIVVIG 361
Query: 1641 EHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWL 1820
E PY E GD++NLTIP G T++ VC +++C+ +LISGRP+VI+P+L +DA VAAWL
Sbjct: 362 EAPYAEYYGDNLNLTIPLSGGDTIKNVCGSLKCLVILISGRPLVIKPYLPLVDAFVAAWL 541
Query: 1821 PGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGFGLTT 1982
PGTEGQGVTDV+FGDYGF GKLPRTWF+SVDQLPMN GD HYDPLFPLGFGL+T
Sbjct: 542 PGTEGQGVTDVIFGDYGFQGKLPRTWFKSVDQLPMNVGDKHYDPLFPLGFGLST 703
Score = 149 bits (320), Expect(2) = 2e-059
Identities = 76/137 (55%), Positives = 82/137 (59%)
Frame = -2 / -3
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP F+GSWST LNHV GSFP NP*SP TSVTPWPSVPGS AAT AS R G IT+G
Sbjct: 663 CLSPTFMGSWSTLLNHVLGSFP*NP*SPKITSVTPWPSVPGSHAATKASTNGR*GLITSG 484
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P + H T V P G+V+ LSP S G SP TIAYE P LT SASG
Sbjct: 483 LPDIKITRHFKDPQTFLIVSPPLKGMVKLRLSP*YSA*GASPITTIAYENPFPLT*SASG 304
Query: 1582 LSANTTSVDGSTAAFTA 1532
TT V+ TA A
Sbjct: 303 FFL*TTLVEELTANLIA 253
Score = 101 bits (216), Expect(2) = 2e-059
Identities = 44/69 (63%), Positives = 48/69 (69%)
Frame = -2 / -3
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
CHSIVHPPH PRLSA +P TRIL AFL +GS G PF ++T D TAS A SLCS
Sbjct: 210 CHSIVHPPH**PRLSA*VPTTRILEAFLFKGSKGLFVDFPFFNNTRDFLTASLANSLCSL 31
Query: 1309 FPSWSARLG 1283
PSW ARLG
Sbjct: 30 LPSWLARLG 4
>gb|CF671079.1|CF671079 RTCNT1_54_C10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_54_C10_A029 5', mRNA sequence
Length = 713
Score = 399 bits (866), Expect = e-110
Identities = 161/237 (67%), Positives = 189/237 (79%)
Frame = +3 / +2
Query: 1254 MGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPLPKKAARILVA 1433
MGLF +PM +PSL +QLG + HR+LAREAVRKSLVLLKNGK PLLPL K AA+ILVA
Sbjct: 2 MGLF*HPMANPSLVNQLGSKVHRELAREAVRKSLVLLKNGKSASKPLLPLNKNAAKILVA 181
Query: 1434 GSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGG 1613
G+HADNLGYQCGGWTI WQG L+A+K+ V PSTEVV+ E+PDA++V G
Sbjct: 182 GTHADNLGYQCGGWTITWQGLSGNSTKGTTILEAIKSTVSPSTEVVYQENPDAKYVEGQG 361
Query: 1614 FSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGA 1793
FSYAIV VGE PY ET GD++NLTIP G T++ VC +V+C+ +LISGRP+VI+P+L
Sbjct: 362 FSYAIVLVGEAPYAETFGDNLNLTIPLGGADTIKNVCGSVKCLVILISGRPLVIEPYLPL 541
Query: 1794 MDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPL 1964
+DA VAAWLPGTEGQGVTDV+FGD GF GKL RTWF+SVDQLPMN GD HYDPLFPL
Sbjct: 542 IDAFVAAWLPGTEGQGVTDVIFGDQGFRGKLSRTWFKSVDQLPMNVGDKHYDPLFPL 712
Score = 158 bits (340), Expect(2) = 2e-064
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -2 / -3
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGS ST LNHV SFP+ P*SP TSVTPWPSVPGSQAAT AS+ R G IT+G
Sbjct: 690 CLSPTFIGS*STLLNHVLESFPLKP*SPKITSVTPWPSVPGSQAATKASINGR*GSITSG 511
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P + H T HT V P GIV+ LSP VS G SPT T+AYE P T ASG
Sbjct: 510 LPDIKITRHFTEPHTFLIVSAPPKGIVKLRLSPNVSA*GASPTRTMAYENPCPSTYFASG 331
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV+G T A
Sbjct: 330 FS**TTSVEGLTVDLIA 280
Score = 109 bits (233), Expect(2) = 2e-064
Identities = 47/79 (59%), Positives = 51/79 (64%)
Frame = -2 / -3
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
C IVHPPH PRLSAW+PATRI AAFL +GS G PF +ST D TAS A SLC+
Sbjct: 237 CQVIVHPPH**PRLSAWVPATRIFAAFLFKGSKGLLADFPFFNSTRDFLTASLANSLCTL 58
Query: 1309 FPSWSARLGSGMGFSNRPM 1253
PSW RLG MG PM
Sbjct: 57 LPSWLTRLGLAMGC*KSPM 1
>gb|DT638708.1|DT638708 EST1153639 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHI44 3' end, mRNA sequence
Length = 865
Score = 399 bits (865), Expect = e-110
Identities = 168/266 (63%), Positives = 192/266 (72%)
Frame = +3 / +3
Query: 816 GDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFSTVMISYSSWNGLKMHANHNLIT 995
GDGGT GINENNT+ L +HM Y+DAL KG ST+M SYSSWNG+KMHA+H L+T
Sbjct: 9 GDGGTTGGINENNTVASYYDLYRVHMLPYVDALAKGVSTIMASYSSWNGVKMHASHYLLT 188
Query: 996 GFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVPNNYQNFITILT 1175
LKDR+ F+GF ISDWE IDR+TSPPGANYSYS+ ASI AG+DM+MVP N+Q +I LT
Sbjct: 189 RILKDRMGFKGFIISDWEAIDRITSPPGANYSYSISASINAGIDMVMVPFNFQTYIDELT 368
Query: 1176 GHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSL 1355
VNS +I MSRIDDAV RILRVKF GLFE+P D SL +G HR+LAREAVRKSL
Sbjct: 369 ALVNSNVISMSRIDDAVRRILRVKFVAGLFEHPKTDRSLLGMVGNLAHRELAREAVRKSL 548
Query: 1356 VLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDA 1535
VLLKNGK PLLPL KKA +ILVAGSHADNLGYQCGGWTI W+G LDA
Sbjct: 549 VLLKNGKMPGKPLLPLDKKAPKILVAGSHADNLGYQCGGWTISWEGGSGATTVGTTILDA 728
Query: 1536 VKAAVDPSTEVVFAESPDAEFVRSGG 1613
+K AV PST P +F + G
Sbjct: 729 IKQAVSPSTRSSIRAEPRCKFYQREG 806
Score = 204 bits (441), Expect(3) = 1e-056
Identities = 105/192 (54%), Positives = 120/192 (62%)
Frame = -2 / -1
Query: 1480 IVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSCFPS 1301
IVHPPHWYPRLSA LPAT I AFL RG++G PF T DLRTAS A SLC+ P+
Sbjct: 673 IVHPPHWYPRLSA*LPATSIFGAFLSRGNNGFPGIFPFFKRTRDLRTASLASSLCARLPT 494
Query: 1300 WSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMIMSR 1121
+ S G SN+P NLT RI TASSI L+ I FT V M W L GT+ MS
Sbjct: 493 MPNKERSVFGCSNKPATNLTLRILRTASSIRLMEITLEFTRAVSSSM*VWKLKGTITMSI 314
Query: 1120 PARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE*E 941
PA IEA * *FAPGG V LS+ SQSE++ P LS + V R WLACI +PFQLE*+
Sbjct: 313 PALIEAEIL*L*FAPGGEVILSIASQSEMMNPLNPILSFKMRVRR*WLACIFTPFQLE*D 134
Query: 940 IMTVEKPLRSAS 905
M V+ P AS
Sbjct: 133 AMMVDTPFAKAS 98
Score = 28.6 bits (56), Expect(3) = 1e-056
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2 / -3
Query: 1669 SPLVSVYGCSPTATIAYEKPPLLTNSASGLSANTTS 1562
SP+ S G SP +A E P L ASG + TTS
Sbjct: 863 SPVDST*GGSPITAMA*ENPFPLVKFASGFCSYTTS 756
Score = 27.6 bits (54), Expect(3) = 1e-056
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 856 VLFSLMPFCVPPSP 815
VLFSL+P VPPSP
Sbjct: 49 VLFSLIPPVVPPSP 8
>gb|DR099434.1|DR099434 STRR1_55_C05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_55_C05_A033 5', mRNA sequence
Length = 719
Score = 369 bits (801), Expect = e-101
Identities = 148/238 (62%), Positives = 182/238 (76%)
Frame = +3 / +1
Query: 1170 LTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRK 1349
LT V G I M+RI+DAV RILRVKFTMGLFE P+ DP+LA LG +EHR+LAREAVRK
Sbjct: 4 LTSQVKGGFISMNRINDAVRRILRVKFTMGLFEQPLADPNLAGHLGSKEHRNLAREAVRK 183
Query: 1350 SLVLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXL 1529
SLVLLKNGK P LPL K ++ILVAG+H DNLGYQCGGWT++WQG L
Sbjct: 184 SLVLLKNGKSTSEPFLPLDKNVSKILVAGTHPDNLGYQCGGWTMQWQGSSGNSTIGTTIL 363
Query: 1530 DAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPST 1709
+A+K AV PSTEVV+ ++PDA +V+ GFSY IV VGE PY E GD++NLTIP G T
Sbjct: 364 EAIKLAVSPSTEVVYQQNPDANYVKEQGFSYGIVVVGEAPYAEMFGDNLNLTIPMGGGDT 543
Query: 1710 VQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGK 1883
++ VC +++C+ +LISGRP+VI+P+L +DA VAAWLPGT+G+GVTDV+FGDY F GK
Sbjct: 544 IKNVCGSLKCLVILISGRPLVIEPYLPLVDAFVAAWLPGTKGRGVTDVIFGDYDFEGK 717
Score = 142 bits (305), Expect(2) = 2e-060
Identities = 60/107 (56%), Positives = 70/107 (65%)
Frame = -2 / -1
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
CH IVHPPHW PRLS W+PATRIL FL +G G+ PF +ST D TAS A+ LCS
Sbjct: 323 CHCIVHPPHW*PRLSGWVPATRILETFLSKGRKGSLVDFPFFNSTRDFLTASLAKFLCSL 144
Query: 1309 FPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVR 1169
P W AR GS G S P+VN T +I TAS IL + ++P FT* VR
Sbjct: 143 LPRWPARFGSARGCSKSPIVNFTLKILRTASFILFMEMKPPFT*EVR 3
Score = 112 bits (239), Expect(2) = 2e-060
Identities = 60/118 (50%), Positives = 65/118 (55%)
Frame = -2 / -1
Query: 1885 SFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTGRPLMSTVTHRTAAHTVCTV 1706
SFP *SP TSVTP P VPGS AAT AS R G IT+G P + H HT V
Sbjct: 719 SFPSKS*SPKITSVTPRPFVPGSHAATKASTNGRYGSITSGLPDIKITRHFNDPHTFLIV 540
Query: 1705 LGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASGLSANTTSVDGSTAAFTA 1532
P GIV+ LSP +S G SPT TI YE P T ASG TTSV+G TA A
Sbjct: 539 SPPPMGIVKLRLSPNISA*GASPTTTIPYENPCSFT*FASGFC**TTSVEGLTANLIA 366
>gb|DT631864.1|DT631864 EST1146795 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFD63 3' end, mRNA sequence
Length = 822
Score = 311 bits (673), Expect(2) = e-100
Identities = 125/181 (69%), Positives = 145/181 (80%)
Frame = +3 / +2
Query: 201 YQDASKDVEVRVRDLLARMTLAEKVGQMTQIERIVASPQALRDYYIXXXXXXXXXVPRKQ 380
Y+D S+ + RV DLLARMTLAEK+GQMTQIER VA+ +++YYI VP +
Sbjct: 161 YKDPSQPINARVEDLLARMTLAEKIGQMTQIERSVATADVMKNYYIGSVLSGGGSVPAPK 340
Query: 381 ATAAEWVAMVSDFQKACLSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLV 560
A+ W+ +V QK LSTRL IPM+YGIDAVHGHNNVYGATIFPHNVGLGATRDP+L
Sbjct: 341 ASPDTWINLVDGLQKGALSTRLQIPMMYGIDAVHGHNNVYGATIFPHNVGLGATRDPDLA 520
Query: 561 KRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDV 740
+RIGAATALEVRATGIQY FAPC+AVCRDPRWGRCYESYSED +IV+AMT++I GLQG
Sbjct: 521 RRIGAATALEVRATGIQYVFAPCVAVCRDPRWGRCYESYSEDPKIVKAMTKIISGLQGQA 700
Query: 741 P 743
P
Sbjct: 701 P 703
Score = 158 bits (339), Expect(2) = 1e-038
Identities = 76/130 (58%), Positives = 83/130 (63%)
Frame = -2 / -1
Query: 754 VKFCGTSPCRPGMSSVMACTIRWXXXXXX*HRPHLGSRHTAMHGANAYWMPVALTSSAVA 575
+ F G PCRP + VMA TI * RPH GS TA HGAN Y MPVALTS AVA
Sbjct: 714 IPFVGACPCRPEIIFVMALTIFGSSL*LS*QRPHRGSLQTATHGANTY*MPVALTSKAVA 535
Query: 574 APILFTRFGSLVAPRPTLWGKMVAPYTLLWPWTASMP*IIGMPRRVDRHAFWKSLTMATH 395
APIL + GSLVAP PTL GKMVAP TLLWP TAS+P I+G+ RRVDR FW T H
Sbjct: 534 APILLAKSGSLVAPSPTL*GKMVAP*TLLWPCTASIPYIMGI*RRVDRAPFWSPSTKLIH 355
Query: 394 SAAVACFRGT 365
+ A GT
Sbjct: 354 VSGDALGAGT 325
Score = 75.3 bits (158), Expect(2) = e-100
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +3 / +2
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIID 866
T G+PF AG+ VAACAKHFVGDGGT +GINENNT+I+
Sbjct: 704 TKGIPFMAGQSNVAACAKHFVGDGGTTDGINENNTVIN 817
Score = 23.5 bits (45), Expect(2) = 1e-038
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1 / -3
Query: 263 QRHPRQQVPDADLHVLAGVLV 201
Q HPRQQV + L VLV
Sbjct: 223 QSHPRQQVLHTSIDGLRWVLV 161
>gb|DR099170.1|DR099170 STRR1_53_D05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_53_D05_A033 5', mRNA sequence
Length = 693
Score = 352 bits (763), Expect = 6e-096
Identities = 142/228 (62%), Positives = 174/228 (76%)
Frame = +3 / +2
Query: 1170 LTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRK 1349
LT V G I M+RI+DAV RILRVKFTMGLFE P+ DP+LA LG +EHR+LAREAVRK
Sbjct: 8 LTSQVKGGFISMNRINDAVRRILRVKFTMGLFEQPLADPNLAGHLGSKEHRNLAREAVRK 187
Query: 1350 SLVLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXL 1529
SLVLLKNGK P LPL K ++ILVAG+H DNLGYQCGGWT++WQG L
Sbjct: 188 SLVLLKNGKSTSEPFLPLDKNVSKILVAGTHPDNLGYQCGGWTMQWQGSSGNSTIGTTIL 367
Query: 1530 DAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPST 1709
+A+K AV PSTEVV+ ++PDA +V+ GFSY IV VGE PY E GD++NLTIP G T
Sbjct: 368 EAIKLAVSPSTEVVYQQNPDANYVKEQGFSYGIVVVGEAPYAEMFGDNLNLTIPMGGGDT 547
Query: 1710 VQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDV 1853
++ VC +++C+ +LISGRP+VI+P+L +DA VAAWLPGTEG+GVTDV
Sbjct: 548 IKNVCGSLKCLVILISGRPLVIEPYLPLVDAFVAAWLPGTEGRGVTDV 691
Score = 144 bits (308), Expect(2) = 2e-058
Identities = 60/109 (55%), Positives = 72/109 (66%)
Frame = -2 / -1
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
CH IVHPPHW PRLS W+PATRIL FL +G G+ PF +ST D TAS A+ LCS
Sbjct: 327 CHCIVHPPHW*PRLSGWVPATRILETFLSKGRKGSLVDFPFFNSTRDFLTASLAKFLCSL 148
Query: 1309 FPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMV 1163
P W AR GS G S P+VN T +I TAS IL + ++P FT* VR++
Sbjct: 147 LPRWPARFGSARGCSKSPIVNFTLKILRTASFILFMEMKPPFT*EVRLL 1
Score = 104 bits (221), Expect(2) = 2e-058
Identities = 55/107 (51%), Positives = 60/107 (56%)
Frame = -2 / -1
Query: 1852 TSVTPWPSVPGSQAATTASMAPRNGCITTGRPLMSTVTHRTAAHTVCTVLGPGSGIVRFM 1673
TSVTP PSVPGS AAT AS R G IT+G P + H HT V P GIV+
Sbjct: 690 TSVTPRPSVPGSHAATKASTNGRYGSITSGLPDIKITRHFNDPHTFLIVSPPPMGIVKLR 511
Query: 1672 LSPLVSVYGCSPTATIAYEKPPLLTNSASGLSANTTSVDGSTAAFTA 1532
LSP +S G SPT TI YE P T ASG TTSV+G TA A
Sbjct: 510 LSPNISA*GASPTTTIPYENPCSFT*FASGFC**TTSVEGLTANLIA 370
>gb|DR018410.1|DR018410 STRS1_22_G03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_22_G03_A034 5', mRNA sequence
Length = 747
Score = 273 bits (591), Expect(3) = 5e-093
Identities = 114/178 (64%), Positives = 136/178 (76%)
Frame = +3 / +3
Query: 1035 ISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRI 1214
+ DWEGIDR+TSPP ANYS S+ S+ AG+DM+M+P N+ F+ LT V G IP+SRI
Sbjct: 99 LQDWEGIDRITSPPDANYSLSILESVGAGIDMVMLPYNFTYFMGNLTSQVKGGFIPISRI 278
Query: 1215 DDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGKPGDAPL 1394
+DAV RILRVKFTMGLFE P+ +PSLA+QLG +EHR+LAREAVRKSLVLLKNGK + PL
Sbjct: 279 NDAVRRILRVKFTMGLFEQPLANPSLANQLGSKEHRELAREAVRKSLVLLKNGKSMNNPL 458
Query: 1395 LPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEV 1568
LPL K A++ILV G+HADNLGYQCGGWTIEWQG L+A+K AV S V
Sbjct: 459 LPLNKNASKILVVGTHADNLGYQCGGWTIEWQGLSGNSTIGTTFLEAIKLAVSSSKVV 632
Score = 167 bits (359), Expect(3) = 2e-049
Identities = 82/150 (54%), Positives = 99/150 (66%)
Frame = -2 / -3
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
CHSIVHPPH PRLSA +P TRIL AFL +GS G PF ++T D TAS A SLCS
Sbjct: 553 CHSIVHPPH**PRLSA*VPTTRILEAFLFKGSKGLFIDFPFFNNTRDFLTASLANSLCSL 374
Query: 1309 FPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMI 1130
PSW ARLG G S P+VN T +I TAS ILL+G++P T VR+ +K+ L G++
Sbjct: 373 LPSWLARLGLARGCSKSPIVNFTLKILRTASFILLMGMKPPLTCEVRLPIKYVKL*GSIT 194
Query: 1129 MSRPARIEACTE*E*FAPGGLVTLSMPSQS 1040
MS PA + + E* A GGLV LS+PSQS
Sbjct: 193 MSIPAPTLSKIDKE*LASGGLVILSIPSQS 104
Score = 57.4 bits (119), Expect(3) = 5e-093
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +3 / +1
Query: 921 GFSTVMISYSSWNGLKMHANHNLITGFLKDRLNFQ 1025
G ST+M+SYSSWNG+KMHAN LI+ LK +L F+
Sbjct: 1 GVSTIMVSYSSWNGVKMHANRFLISHVLKKQLGFK 105
Score = 51.9 bits (107), Expect(3) = 5e-093
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3 / +3
Query: 1557 STEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTE 1658
S++VV+ ++PD ++V+ GFSYAIV VGE PY E
Sbjct: 618 SSKVVYKKNPDVDYVKGKGFSYAIVVVGEAPYAE 719
Score = 34.5 bits (69), Expect(3) = 2e-049
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -2 / -2
Query: 1021 KLSLSLRKPVMRLWLACILSPFQLE*EIMTVE 926
K S LR MR LACI +PFQLE*+ + VE
Sbjct: 101 KPSCFLRT*EMRNRLACIFTPFQLE*DTIMVE 6
Score = 34.5 bits (69), Expect(3) = 2e-049
Identities = 17/28 (60%), Positives = 17/28 (60%)
Frame = -2 / -3
Query: 1648 GCSPTATIAYEKPPLLTNSASGLSANTT 1565
G SPT TIAYE P LT S SG TT
Sbjct: 709 GASPTTTIAYENPFPLT*STSGFFL*TT 626
>gb|CO363132.1|CO363132 RTK1_7_G05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_7_G05_A029 5', mRNA sequence
Length = 743
Score = 337 bits (731), Expect = 1e-091
Identities = 133/195 (68%), Positives = 156/195 (80%)
Frame = +3 / -3
Query: 1395 LPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVF 1574
LPL K AA+ILVAG+HADNLGYQCGGWTI WQG L+A+K+ V PSTEVV+
Sbjct: 741 LPLNKNAAKILVAGTHADNLGYQCGGWTITWQGLSGNSTKGTTILEAIKSTVSPSTEVVY 562
Query: 1575 AESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLI 1754
E+PDA++V GFSYAIV VGE PY ET GD++NLTIP G T++ VC +V+C+ +LI
Sbjct: 561 QENPDAKYVEGQGFSYAIVLVGEAPYAETFGDNLNLTIPLGGADTIKNVCGSVKCLVILI 382
Query: 1755 SGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYG 1934
SGRP+VI+P+L +DA VAAWLPGTEGQGVTDV+FGD GF GKL RTWF+SVDQLPMN G
Sbjct: 381 SGRPLVIEPYLPLIDAFVAAWLPGTEGQGVTDVIFGDQGFRGKLSRTWFKSVDQLPMNVG 202
Query: 1935 DAHYDPLFPLGFGLT 1979
D HYDPLFPLGFGLT
Sbjct: 201 DKHYDPLFPLGFGLT 157
Score = 158 bits (340), Expect(2) = 1e-049
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -2 / +2
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGS ST LNHV SFP+ P*SP TSVTPWPSVPGSQAAT AS+ R G IT+G
Sbjct: 194 CLSPTFIGS*STLLNHVLESFPLKP*SPKITSVTPWPSVPGSQAATKASINGR*GSITSG 373
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P + H T HT V P GIV+ LSP VS G SPT T+AYE P T ASG
Sbjct: 374 LPDIKITRHFTEPHTFLIVSAPPKGIVKLRLSPNVSA*GASPTRTMAYENPCPSTYFASG 553
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV+G T A
Sbjct: 554 FS**TTSVEGLTVDLIA 604
Score = 60.2 bits (125), Expect(2) = 1e-049
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = -2 / +2
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGS 1394
C IVHPPH PRLSAW+PATRI AAFL +GS
Sbjct: 647 CQVIVHPPH**PRLSAWVPATRIFAAFLFKGS 742
>gb|DR056258.1|DR056258 RTCA1_29_C09.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_29_C09_A029 3', mRNA sequence
Length = 714
Score = 330 bits (715), Expect = 2e-089
Identities = 130/193 (67%), Positives = 153/193 (79%)
Frame = +3 / +1
Query: 1401 LPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAE 1580
L K AA+ILVAG+HADNLGYQCGGWTI WQG L+A+K+ V PSTEVV+ E
Sbjct: 1 LNKNAAKILVAGTHADNLGYQCGGWTITWQGLSGNSTKGTTILEAIKSTVSPSTEVVYQE 180
Query: 1581 SPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISG 1760
+PDA++V GFSYAIV VGE PY ET GD++NLTIP G T++ VC +V+C+ +LISG
Sbjct: 181 NPDAKYVEEQGFSYAIVLVGEAPYAETFGDNLNLTIPLGGADTIKNVCGSVKCLVILISG 360
Query: 1761 RPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDA 1940
RP+VI+P+L +DA VAAWLPGTEGQGVTDV+FGD GF GKL RTWF+ VDQLPMN GD
Sbjct: 361 RPLVIEPYLPLIDAFVAAWLPGTEGQGVTDVIFGDQGFRGKLSRTWFKRVDQLPMNVGDK 540
Query: 1941 HYDPLFPLGFGLT 1979
HYDPLFPLGFGLT
Sbjct: 541 HYDPLFPLGFGLT 579
Score = 159 bits (342), Expect(2) = 1e-048
Identities = 79/137 (57%), Positives = 87/137 (63%)
Frame = -2 / -2
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGS ST LNHV SFP+ P*SP TSVTPWPSVPGSQAAT AS+ R G IT+G
Sbjct: 542 CLSPTFIGS*STLLNHVLESFPLKP*SPKITSVTPWPSVPGSQAATKASINGR*GSITSG 363
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P + H T HT V P +GIV+ LSP VS G SPT T+AYE P T ASG
Sbjct: 362 LPDIKITRHFTEPHTFLIVSAPPNGIVKLRLSPNVSA*GASPTRTMAYENPCSSTYFASG 183
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV+G T A
Sbjct: 182 FS**TTSVEGLTVDLIA 132
Score = 56.1 bits (116), Expect(2) = 1e-048
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -2 / -2
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFL 1406
C IVHPPH PRLSAW+PATRI AAFL
Sbjct: 89 CQVIVHPPH**PRLSAWVPATRIFAAFL 6
>gb|CO162180.1|CO162180 FLD1_33_D11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_33_D11_A029 5', mRNA sequence
Length = 846
Score = 321 bits (696), Expect = 1e-086
Identities = 124/185 (67%), Positives = 149/185 (80%)
Frame = +3 / +1
Query: 1422 ILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFV 1601
+LVAG+H DNLGYQCGGWT+EWQG L+A+K AV PSTEVV+ ++PDA +V
Sbjct: 1 VLVAGTHPDNLGYQCGGWTMEWQGLSGNITVGTTILEAIKLAVSPSTEVVYEQNPDANYV 180
Query: 1602 RSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQP 1781
+ GFSYAIV VGE PY ET GD++NLTIP G T++TVC +++C+ +LISGRP+VI+P
Sbjct: 181 KGQGFSYAIVVVGEAPYAETFGDNLNLTIPLGGGDTIKTVCGSLKCLVILISGRPLVIEP 360
Query: 1782 FLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFP 1961
+L +DA VAAWLPGTEGQGVTDV+FGDY F GKL RTWF+SVDQLPMN GD HYDPLFP
Sbjct: 361 YLPLVDAFVAAWLPGTEGQGVTDVIFGDYRFQGKLARTWFKSVDQLPMNIGDQHYDPLFP 540
Query: 1962 LGFGL 1976
LGFGL
Sbjct: 541 LGFGL 555
Score = 190 bits (410), Expect = 3e-047
Identities = 95/173 (54%), Positives = 104/173 (60%)
Frame = -2 / -2
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGS ST LNHV S P *SP TSVTPWPSVPGS AAT AS R G IT+G
Sbjct: 521 CWSPMFIGS*STLLNHVLASLP*KR*SPKITSVTPWPSVPGSHAATKASTNGR*GSITSG 342
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P + H TV V P G+V+ LSP VS YG SPT T+AYE P LT ASG
Sbjct: 341 LPDIKITRHFKEPQTVLIVSPPPRGMVKLRLSPNVSAYGASPTTTMAYENPCPLT*LASG 162
Query: 1582 LSANTTSVDGSTAAFTAXXXXXXXXXXXXXPCHSIVHPPHWYPRLSAWLPATR 1424
+ TTSV+G TA+ A PCHSIVHPPH PRLS W+PATR
Sbjct: 161 FCS*TTSVEGLTASLIASRIVVPTVMFPLNPCHSIVHPPH**PRLSGWVPATR 3
>gb|BX680507.1|BX680507 BX680507 RS Pinus pinaster cDNA clone RS44E12, mRNA sequence
Length = 611
Score = 311 bits (674), Expect = 1e-083
Identities = 131/196 (66%), Positives = 152/196 (77%)
Frame = +3 / +3
Query: 963 LKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVP 1142
+KMHANH LI+ LK +L F+GF ISDW+GIDR+TSPPGANYS SV + AG+DM+MVP
Sbjct: 24 MKMHANHFLISQVLKKKLGFKGFVISDWQGIDRITSPPGANYSLSVFDGVSAGIDMVMVP 203
Query: 1143 NNYQNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHR 1322
NY FI+ LT V SGLI M RI+DAV RILRVKFTMGLFE+PM +PSL +QLG + HR
Sbjct: 204 FNYTYFISNLTSQVKSGLISMPRINDAVRRILRVKFTMGLFEHPMANPSLVNQLGSKAHR 383
Query: 1323 DLAREAVRKSLVLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXX 1502
+LAREAVRKSLVLLKNGK PLLPL K AA+ILVAG+HADNLGYQCGGWTI WQG
Sbjct: 384 ELAREAVRKSLVLLKNGKSDSKPLLPLNKNAAKILVAGTHADNLGYQCGGWTITWQGLSG 563
Query: 1503 XXXXXXXXLDAVKAAV 1550
L+A+K+ V
Sbjct: 564 NSTKGTTILEAIKSTV 611
Score = 210 bits (453), Expect = 3e-053
Identities = 100/174 (57%), Positives = 115/174 (66%)
Frame = -2 / -2
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
C IVHPPH PRLSAW+PATRI AAFL +GS G PF +ST D TAS A SLC+
Sbjct: 550 CQVIVHPPH**PRLSAWVPATRIFAAFLFKGSKGLLSDFPFFNSTRDFLTASLANSLCAL 371
Query: 1309 FPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMI 1130
PSW RLG MG S PMVN T +I TAS IL + I+PL T VR+++K+ *L GT+
Sbjct: 370 LPSWLTRLGLAMGCSKSPMVNFTLKILRTASFILGMEIKPLLTCEVRLLIKYV*LKGTIT 191
Query: 1129 MSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACI 968
MS PA + T+ E* APGGLV LS+P QSEI KP K S R MR WLACI
Sbjct: 190 MSIPALTPSKTDKE*LAPGGLVILSIPCQSEITKPLKPSFFFRT*EMRKWLACI 29
>gb|DR056330.1|DR056330 RTCA1_29_C09.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_29_C09_A029 5', mRNA sequence
Length = 604
Score = 306 bits (662), Expect = 5e-082
Identities = 123/176 (69%), Positives = 143/176 (81%)
Frame = +3 / +2
Query: 201 YQDASKDVEVRVRDLLARMTLAEKVGQMTQIERIVASPQALRDYYIXXXXXXXXXVPRKQ 380
Y+D S+ + RV DLLARMTLAEK+GQMTQIER VA+ +++YYI VP +
Sbjct: 77 YEDPSQPINARVEDLLARMTLAEKIGQMTQIERSVATADVMKNYYIGSVLSGGGSVPAPK 256
Query: 381 ATAAEWVAMVSDFQKACLSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLV 560
A+ A W+ +V QK LSTRL IPM+YGIDAVHGHNNVYGATIFPHNVGLGATRDP+L
Sbjct: 257 ASPATWINLVDGLQKGALSTRLQIPMMYGIDAVHGHNNVYGATIFPHNVGLGATRDPDLA 436
Query: 561 KRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGL 728
+RIGAATALEVRATGIQY FAPC+AVCRDPRWGRCYESYSED +IV+AMT++I GL
Sbjct: 437 RRIGAATALEVRATGIQYVFAPCVAVCRDPRWGRCYESYSEDPKIVKAMTKIISGL 604
Score = 146 bits (314), Expect(2) = 4e-035
Identities = 73/121 (60%), Positives = 78/121 (64%)
Frame = -2 / -2
Query: 727 RPGMSSVMACTIRWXXXXXX*HRPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFG 548
RP + VMA TI * RPH GS TA HGAN Y MPVALTS AVAAPIL + G
Sbjct: 603 RPEIIFVMALTIFGSSL*LS*QRPHRGSLQTATHGANTY*MPVALTSKAVAAPILLAKSG 424
Query: 547 SLVAPRPTLWGKMVAPYTLLWPWTASMP*IIGMPRRVDRHAFWKSLTMATHSAAVACFRG 368
SLVAP PTL GKMVAP TLLWP TAS+P I+G+ RRVDR FW T H A A G
Sbjct: 423 SLVAPSPTL*GKMVAP*TLLWPCTASIPYIMGI*RRVDRAPFWSPSTKLIHVAGDALGAG 244
Query: 367 T 365
T
Sbjct: 243 T 241
Score = 23.5 bits (45), Expect(2) = 4e-035
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1 / -1
Query: 263 QRHPRQQVPDADLHVLAGVLV 201
Q HPRQQV + L VLV
Sbjct: 139 QSHPRQQVLHTSIDGLRWVLV 77
>gb|DR013884.1|DR013884 HEAT1_22_D06.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_22_D06_A029 3', mRNA sequence
Length = 658
Score = 304 bits (658), Expect = 2e-081
Identities = 122/181 (67%), Positives = 144/181 (79%)
Frame = +3 / -3
Query: 186 GVPPPYQDASKDVEVRVRDLLARMTLAEKVGQMTQIERIVASPQALRDYYIXXXXXXXXX 365
G Y+D S+ ++ RV+DLLARMTL EK+GQMTQIER A+ ++ YYI
Sbjct: 545 GYASRYKDPSQPIDARVKDLLARMTLEEKIGQMTQIERTDATADVMKHYYIGSVLSGGGS 366
Query: 366 VPRKQATAAEWVAMVSDFQKACLSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATR 545
VP +A+ A W+ MV + QK +STRL IPMIYGIDAVHGHNNV+GATIFPHN+GLGATR
Sbjct: 365 VPAPKASPATWINMVDELQKGAMSTRLQIPMIYGIDAVHGHNNVFGATIFPHNIGLGATR 186
Query: 546 DPNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPG 725
DP+L +RIGAATALEVRATGIQY FAPC+AVCRDPRWGRCYESYSED +IV+AMTE+I G
Sbjct: 185 DPDLARRIGAATALEVRATGIQYTFAPCVAVCRDPRWGRCYESYSEDPKIVKAMTEIIVG 6
Query: 726 L 728
L
Sbjct: 5 L 3
Score = 149 bits (319), Expect = 1e-034
Identities = 76/122 (62%), Positives = 78/122 (63%)
Frame = -2 / +1
Query: 730 CRPGMSSVMACTIRWXXXXXX*HRPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRF 551
CRP + SVMA TI * RPH GS TA HGAN Y MPVA TS AVAAPIL R
Sbjct: 1 CRPTIISVMALTIFGSSL*LS*QRPHRGSLQTATHGANVY*MPVARTSKAVAAPILLARS 180
Query: 550 GSLVAPRPTLWGKMVAPYTLLWPWTASMP*IIGMPRRVDRHAFWKSLTMATHSAAVACFR 371
GSLVAP P L GKMVAP TLL P TASMP IIG+ RRVD FW S TM H A A
Sbjct: 181 GSLVAPSPIL*GKMVAPNTLL*PCTASMPYIIGI*RRVDMAPFWSSSTMLIHVAGDALGA 360
Query: 370 GT 365
GT
Sbjct: 361 GT 366
>gb|CF671009.1|CF671009 RTCNT1_54_C10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_54_C10_A029 3', mRNA sequence
Length = 692
Score = 294 bits (637), Expect = 1e-078
Identities = 115/173 (66%), Positives = 135/173 (78%)
Frame = +3 / +1
Query: 1461 QCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVG 1640
QCGGWTI WQG L+A+K+ V PSTEVV+ E+PDA +V GFSYAIV VG
Sbjct: 1 QCGGWTITWQGLSGNSTKGTTILEAIKSTVSPSTEVVYQENPDAXYVEGQGFSYAIVLVG 180
Query: 1641 EHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWL 1820
E PY ET GD++NLTIP G T++ VC +V+C+ +LISGRP+VI+P+L +DA VAAWL
Sbjct: 181 EAPYAETFGDNLNLTIPLGGADTIKNVCGSVKCLVILISGRPLVIEPYLPLIDAFVAAWL 360
Query: 1821 PGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGFGLT 1979
PGTEGQGVTDV+FGD GF GKL RTWF+SVDQLPMN GD HYDPLFPLGFGLT
Sbjct: 361 PGTEGQGVTDVIFGDQGFRGKLSRTWFKSVDQLPMNVGDKHYDPLFPLGFGLT 519
Score = 159 bits (342), Expect(2) = 6e-039
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -2 / -1
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGS ST LNHV SFP+ P*SP TSVTPWPSVPGSQAAT AS+ R G IT+G
Sbjct: 482 CLSPTFIGS*STLLNHVLESFPLKP*SPKITSVTPWPSVPGSQAATKASINGR*GSITSG 303
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P + H T HT V P GIV+ LSP VS G SPT T+AYE P T ASG
Sbjct: 302 LPDIKITRHFTEPHTFLIVSAPPKGIVKLRLSPNVSA*GASPTRTMAYENPCPSTYXASG 123
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV+G T A
Sbjct: 122 FS**TTSVEGLTVDLIA 72
Score = 23.5 bits (45), Expect(2) = 6e-039
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2 / -1
Query: 1489 CHSIVHPPH 1463
C IVHPPH
Sbjct: 29 CQVIVHPPH 3
>gb|DR055806.1|DR055806 RTCA1_26_B12.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_26_B12_A029 3', mRNA sequence
Length = 623
Score = 274 bits (593), Expect = 2e-072
Identities = 106/166 (63%), Positives = 129/166 (77%)
Frame = +3 / +2
Query: 1485 WQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETK 1664
WQG L+A+++AV PSTEVV+ E+PDA +V+ GFSYAIV VGE PY ET
Sbjct: 5 WQGLSGNTTKGTTILEAIQSAVSPSTEVVYQENPDANYVKGQGFSYAIVVVGEAPYAETA 184
Query: 1665 GDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGV 1844
GD++NLTIP G T+ VC +V+C+ +L+SGRP+VI P+L ++A VAAWLPG+EGQGV
Sbjct: 185 GDNLNLTIPLGGGDTINNVCGSVKCLVILVSGRPLVITPYLPLVEAFVAAWLPGSEGQGV 364
Query: 1845 TDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGFGLTT 1982
TDV+FGDYGF GKL RTWF+SVDQLPMN GD HYDPLFP GFGLTT
Sbjct: 365 TDVIFGDYGFQGKLSRTWFKSVDQLPMNVGDKHYDPLFPFGFGLTT 502
Score = 153 bits (329), Expect = 4e-036
Identities = 78/137 (56%), Positives = 85/137 (62%)
Frame = -2 / -3
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGS ST LNHV SFP P*SP TSVTPWPS PGS AAT AS R G IT+G
Sbjct: 462 CLSPTFIGS*STLLNHVLESFPWKP*SPKITSVTPWPSDPGSHAATKASTNGR*GVITSG 283
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P H T HT+ V P G+V+ LSP VS G SPT T+AYE P LT ASG
Sbjct: 282 LPDTKITRHFTEPHTLLIVSPPPKGMVKLRLSPAVSA*GASPTTTMAYENPCPLT*FASG 103
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV+G TA + A
Sbjct: 102 FS**TTSVEGLTADWIA 52
>gb|DR169238.1|DR169238 RTPHOS1_31_B02.b1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_31_B02_A029 3', mRNA sequence
Length = 666
Score = 270 bits (583), Expect = 4e-071
Identities = 107/164 (65%), Positives = 128/164 (78%)
Frame = +3 / +3
Query: 1488 QGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKG 1667
QG L+A+K+ V PSTEVV+ E+PDA++V GFSYAIV VGE PY ET G
Sbjct: 3 QGLSGNSTKGTTILEAIKSTVSPSTEVVYQENPDAKYVEGQGFSYAIVLVGEAPYAETFG 182
Query: 1668 DSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVT 1847
D++NLTIP G T++ VC +V+C+ +LISGRP+VI+P+L +DA VAAWLPGTEGQGVT
Sbjct: 183 DNLNLTIPLGGADTIKNVCGSVKCLVILISGRPLVIEPYLPLIDAFVAAWLPGTEGQGVT 362
Query: 1848 DVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGFGLT 1979
DV+FGD GF GKL RTWF+SVDQLPMN GD HYDPLFPLGFGLT
Sbjct: 363 DVIFGDQGFRGKLSRTWFKSVDQLPMNVGDKHYDPLFPLGFGLT 494
Score = 158 bits (340), Expect = 1e-037
Identities = 79/137 (57%), Positives = 86/137 (62%)
Frame = -2 / -3
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGS ST LNHV SFP+ P*SP TSVTPWPSVPGSQAAT AS+ R G IT+G
Sbjct: 457 CLSPTFIGS*STLLNHVLESFPLKP*SPKITSVTPWPSVPGSQAATKASINGR*GSITSG 278
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P + H T HT V P GIV+ LSP VS G SPT T+AYE P T ASG
Sbjct: 277 LPDIKITRHFTEPHTFLIVSAPPKGIVKLRLSPNVSA*GASPTRTMAYENPCPSTYFASG 98
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV+G T A
Sbjct: 97 FS**TTSVEGLTVDLIA 47
>dbj|BD224350.1| Materials and methods for the modification of plant lignin content
Length = 545
Score = 270 bits (583), Expect = 4e-071
Identities = 107/173 (61%), Positives = 137/173 (79%)
Frame = +3 / +3
Query: 1281 DPSLADQLGKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGY 1460
+PSLA+QLG +EHR+LAREAVRKSLVLLKNGK + PLLPL K A+++LVAG+H DNLGY
Sbjct: 21 NPSLANQLGSKEHRELAREAVRKSLVLLKNGKSANKPLLPLEKNASKVLVAGTHPDNLGY 200
Query: 1461 QCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVG 1640
QCGGWT+EWQG L+A+K AV PSTEVV+ ++PDA +V+ GFSYAIV VG
Sbjct: 201 QCGGWTMEWQGLSGNITVGTTILEAIKLAVSPSTEVVYEQNPDANYVKGQGFSYAIVVVG 380
Query: 1641 EHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMD 1799
E PY ET GD++NLTIP G T++TVC +++C+ +LISGRP+VI+P+L +D
Sbjct: 381 EAPYAETFGDNLNLTIPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPLVD 539
Score = 177 bits (381), Expect = 3e-043
Identities = 85/168 (50%), Positives = 97/168 (57%)
Frame = -2 / -2
Query: 1786 RNGCITTGRPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPP 1607
R G IT+G P + H TV V P G+V+ LSP VS YG SPT T+AYE P
Sbjct: 526 R*GSITSGLPDIKITRHFKEPQTVLIVSPPPRGMVKLRLSPNVSAYGASPTTTMAYENPC 347
Query: 1606 LLTNSASGLSANTTSVDGSTAAFTAXXXXXXXXXXXXXPCHSIVHPPHWYPRLSAWLPAT 1427
LT ASG + TTSV+G TA+ A PCHSIVHPPH PRLS W+PAT
Sbjct: 346 PLT*LASGFCS*TTSVEGLTASLIASRIVVPTVMFPLNPCHSIVHPPH**PRLSGWVPAT 167
Query: 1426 RILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSCFPSWSARLG 1283
R L AF +GS G PF ++T D TAS A SLCS PSW ARLG
Sbjct: 166 RTLEAFFSKGSKGLLADFPFFNNTKDFLTASLANSLCSLLPSWLARLG 23
>dbj|BD224413.1| Materials and methods for the modification of plant lignin content
Length = 528
Score = 270 bits (583), Expect = 4e-071
Identities = 107/173 (61%), Positives = 137/173 (79%)
Frame = +3 / +1
Query: 1281 DPSLADQLGKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGY 1460
+PSLA+QLG +EHR+LAREAVRKSLVLLKNGK + PLLPL K A+++LVAG+H DNLGY
Sbjct: 4 NPSLANQLGSKEHRELAREAVRKSLVLLKNGKSANKPLLPLEKNASKVLVAGTHPDNLGY 183
Query: 1461 QCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVG 1640
QCGGWT+EWQG L+A+K AV PSTEVV+ ++PDA +V+ GFSYAIV VG
Sbjct: 184 QCGGWTMEWQGLSGNITVGTTILEAIKLAVSPSTEVVYEQNPDANYVKGQGFSYAIVVVG 363
Query: 1641 EHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMD 1799
E PY ET GD++NLTIP G T++TVC +++C+ +LISGRP+VI+P+L +D
Sbjct: 364 EAPYAETFGDNLNLTIPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPLVD 522
Score = 177 bits (381), Expect = 3e-043
Identities = 85/168 (50%), Positives = 97/168 (57%)
Frame = -2 / -2
Query: 1786 RNGCITTGRPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPP 1607
R G IT+G P + H TV V P G+V+ LSP VS YG SPT T+AYE P
Sbjct: 509 R*GSITSGLPDIKITRHFKEPQTVLIVSPPPRGMVKLRLSPNVSAYGASPTTTMAYENPC 330
Query: 1606 LLTNSASGLSANTTSVDGSTAAFTAXXXXXXXXXXXXXPCHSIVHPPHWYPRLSAWLPAT 1427
LT ASG + TTSV+G TA+ A PCHSIVHPPH PRLS W+PAT
Sbjct: 329 PLT*LASGFCS*TTSVEGLTASLIASRIVVPTVMFPLNPCHSIVHPPH**PRLSGWVPAT 150
Query: 1426 RILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSCFPSWSARLG 1283
R L AF +GS G PF ++T D TAS A SLCS PSW ARLG
Sbjct: 149 RTLEAFFSKGSKGLLADFPFFNNTKDFLTASLANSLCSLLPSWLARLG 6
>gb|DR018345.1|DR018345 STRS1_22_G03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_22_G03_A034 3', mRNA sequence
Length = 755
Score = 254 bits (550), Expect(2) = 2e-070
Identities = 97/142 (68%), Positives = 120/142 (84%)
Frame = +3 / +3
Query: 1557 STEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVR 1736
S++VV+ ++PD ++V+ GFSYAIV VGE PY E GD++NLTIP G T++ VC +++
Sbjct: 84 SSKVVYKKNPDVDYVKGKGFSYAIVVVGEAPYAEYYGDNLNLTIPLSGGDTIKNVCGSLK 263
Query: 1737 CVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQ 1916
C+ +LISGRP+VI+P+L +DA VAAWLPGTEGQGVTDV+FGDYGF GKLPRTWF+SVDQ
Sbjct: 264 CLVILISGRPLVIKPYLPLVDAFVAAWLPGTEGQGVTDVIFGDYGFQGKLPRTWFKSVDQ 443
Query: 1917 LPMNYGDAHYDPLFPLGFGLTT 1982
LPMN GD HYDPLFPLGFGLTT
Sbjct: 444 LPMNVGDKHYDPLFPLGFGLTT 509
Score = 145 bits (312), Expect = 9e-034
Identities = 72/126 (57%), Positives = 77/126 (61%)
Frame = -2 / -2
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP F+GSWST LNHV GSFP NP*SP TSVTPWPSVPGS AAT AS R G IT+G
Sbjct: 469 CLSPTFMGSWSTLLNHVLGSFP*NP*SPKITSVTPWPSVPGSHAATKASTNGR*GLITSG 290
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P + H T V P G+V+ LSP S G SPT TIAYE P LT S SG
Sbjct: 289 LPDIKITRHFKDPQTFLIVSPPLKGMVKLRLSP*YSA*GASPTTTIAYENPFPLT*STSG 110
Query: 1582 LSANTT 1565
TT
Sbjct: 109 FFL*TT 92
Score = 33.6 bits (67), Expect(2) = 2e-070
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3 / +3
Query: 1473 WTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEV 1568
WTIEWQG L+A+K AV S V
Sbjct: 3 WTIEWQGLSGNSTIGTTFLEAIKLAVSSSKVV 98
>gb|DR100370.1|DR100370 STRR1_63_D08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_63_D08_A033 5', mRNA sequence
Length = 467
Score = 248 bits (537), Expect = 8e-065
Identities = 96/154 (62%), Positives = 119/154 (77%)
Frame = +3 / +3
Query: 1467 GGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEH 1646
GGWTI WQG L+A+++AV PSTEVV+ E+PDA +V+ GFSYAIV VGE
Sbjct: 3 GGWTITWQGLSGNTTKGTTILEAIQSAVSPSTEVVYQENPDANYVKGQGFSYAIVVVGEA 182
Query: 1647 PYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPG 1826
PY ET GD++NLTIP G T+ VC +V+C+ +L+SGRP+VI P+L ++A VAAWLPG
Sbjct: 183 PYAETAGDNLNLTIPLGGGDTINNVCGSVKCLVILVSGRPLVITPYLPLVEAFVAAWLPG 362
Query: 1827 TEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMN 1928
+EGQGVTDV+FGDYGF GKL RTWF+SVDQLPMN
Sbjct: 363 SEGQGVTDVIFGDYGFQGKLSRTWFKSVDQLPMN 464
Score = 146 bits (314), Expect(2) = 4e-035
Identities = 75/132 (56%), Positives = 82/132 (62%)
Frame = -2 / -2
Query: 1927 FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTGRPLMS 1748
FIGS ST LNHV SFP P*SP TSVTPWPS PGS AAT AS R G IT+G P
Sbjct: 463 FIGS*STLLNHVLESFPWKP*SPKITSVTPWPSDPGSHAATKASTNGR*GVITSGLPDTK 284
Query: 1747 TVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASGLSANT 1568
H T HT+ V P G+V+ LSP VS G SPT T+AYE P LT ASG S T
Sbjct: 283 ITRHFTEPHTLLIVSPPPKGMVKLRLSPAVSA*GASPTTTMAYENPCPLT*FASGFS**T 104
Query: 1567 TSVDGSTAAFTA 1532
TSV+G TA + A
Sbjct: 103 TSVEGLTADWIA 68
Score = 23.5 bits (45), Expect(2) = 4e-035
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / -2
Query: 1489 CHSIVHPP 1466
CH IVHPP
Sbjct: 25 CHVIVHPP 2
>dbj|BD224352.1| Materials and methods for the modification of plant lignin content
Length = 435
Score = 243 bits (526), Expect = 3e-063
Identities = 97/125 (77%), Positives = 109/125 (87%)
Frame = +3 / +2
Query: 504 ATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSE 683
ATIFPHN+GLGATRDP+L +RIGAATALEVRATGIQY FAPC+AVCRDPRWGRCYESYSE
Sbjct: 32 ATIFPHNIGLGATRDPDLARRIGAATALEVRATGIQYTFAPCVAVCRDPRWGRCYESYSE 211
Query: 684 DHRIVQAMTELIPGLQGDVPQNFTSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTII 863
D +IV+AMTE+I GLQG+ P N T G PF AG+ VAACAKHFVG GGT GI+ENNT+I
Sbjct: 212 DPKIVKAMTEIIVGLQGNPPANSTKGGPFIAGQSNVAACAKHFVGYGGTTKGIDENNTVI 391
Query: 864 DRQGL 878
+ QGL
Sbjct: 392 NYQGL 406
Score = 160 bits (343), Expect = 5e-038
Identities = 76/124 (61%), Positives = 80/124 (64%)
Frame = -2 / -1
Query: 856 VLFSLMPFCVPPSPTKCLAHAATLSFPAAKGMPLVKFCGTSPCRPGMSSVMACTIRWXXX 677
VLFS +P VPP PTKCLA AAT PA KG P V+ G PCRP + SVMA TI
Sbjct: 384 VLFSSIPLVVPP*PTKCLAQAATFDCPAIKGPPFVELAGGFPCRPTIISVMALTIFGSSL 205
Query: 676 XXX*HRPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPY 497
* RPH GS TA HGAN Y MPVA TS AVAAPIL R GSLVAP P L GKMVA
Sbjct: 204 *LS*QRPHRGSLQTATHGANVY*MPVARTSKAVAAPILLARSGSLVAPSPIL*GKMVASC 25
Query: 496 TLLW 485
+LW
Sbjct: 24 RILW 13
>dbj|BD224415.1| Materials and methods for the modification of plant lignin content
Length = 404
Score = 243 bits (526), Expect = 3e-063
Identities = 97/125 (77%), Positives = 109/125 (87%)
Frame = +3 / +1
Query: 504 ATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSE 683
ATIFPHN+GLGATRDP+L +RIGAATALEVRATGIQY FAPC+AVCRDPRWGRCYESYSE
Sbjct: 1 ATIFPHNIGLGATRDPDLARRIGAATALEVRATGIQYTFAPCVAVCRDPRWGRCYESYSE 180
Query: 684 DHRIVQAMTELIPGLQGDVPQNFTSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTII 863
D +IV+AMTE+I GLQG+ P N T G PF AG+ VAACAKHFVG GGT GI+ENNT+I
Sbjct: 181 DPKIVKAMTEIIVGLQGNPPANSTKGGPFIAGQSNVAACAKHFVGYGGTTKGIDENNTVI 360
Query: 864 DRQGL 878
+ QGL
Sbjct: 361 NYQGL 375
Score = 152 bits (326), Expect = 1e-035
Identities = 73/117 (62%), Positives = 76/117 (64%)
Frame = -2 / -1
Query: 856 VLFSLMPFCVPPSPTKCLAHAATLSFPAAKGMPLVKFCGTSPCRPGMSSVMACTIRWXXX 677
VLFS +P VPP PTKCLA AAT PA KG P V+ G PCRP + SVMA TI
Sbjct: 353 VLFSSIPLVVPP*PTKCLAQAATFDCPAIKGPPFVELAGGFPCRPTIISVMALTIFGSSL 174
Query: 676 XXX*HRPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMV 506
* RPH GS TA HGAN Y MPVA TS AVAAPIL R GSLVAP P L GKMV
Sbjct: 173 *LS*QRPHRGSLQTATHGANVY*MPVARTSKAVAAPILLARSGSLVAPSPIL*GKMV 3
>gb|DR099098.1|DR099098 STRR1_53_D05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_53_D05_A033 3', mRNA sequence
Length = 672
Score = 237 bits (513), Expect = 2e-061
Identities = 91/138 (65%), Positives = 112/138 (81%)
Frame = +3 / +3
Query: 1566 VVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVT 1745
VV+ ++PDA +V+ GFSY IV VGE PY E GD++NLTIP G T++ VC +++C+
Sbjct: 3 VVYQQNPDANYVKEQGFSYGIVVVGEAPYAEMFGDNLNLTIPMGGGDTIKNVCGSLKCLV 182
Query: 1746 VLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPM 1925
+LISGRP+VI+P+L +DA VAAWLPGTEG+GVTDV+FGDY F GKLPRTWFR+VDQLPM
Sbjct: 183 ILISGRPLVIEPYLPLVDAFVAAWLPGTEGRGVTDVIFGDYDFEGKLPRTWFRNVDQLPM 362
Query: 1926 NYGDAHYDPLFPLGFGLT 1979
N GD Y PLFPLGFGLT
Sbjct: 363 NVGDKRYHPLFPLGFGLT 416
Score = 127 bits (273), Expect = 2e-028
Identities = 67/124 (54%), Positives = 72/124 (58%)
Frame = -2 / -3
Query: 1936 SP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTGRP 1757
SP F+GS ST LNHV GSFP *SP TSVTP PSVPGS AAT AS R G IT+G P
Sbjct: 373 SPTFMGS*STFLNHVLGSFPSKS*SPKITSVTPRPSVPGSHAATKASTNGRYGSITSGLP 194
Query: 1756 LMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASGLS 1577
+ H HT V P GIV+ LSP +S G SPT TI YE P T ASG
Sbjct: 193 DIKITRHFNDPHTFLIVSPPPMGIVKLRLSPNISA*GASPTTTIPYENPCSFT*FASGFC 14
Query: 1576 ANTT 1565
TT
Sbjct: 13 **TT 2
>gb|DR099363.1|DR099363 STRR1_55_C05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_55_C05_A033 3', mRNA sequence
Length = 665
Score = 236 bits (510), Expect = 4e-061
Identities = 90/137 (65%), Positives = 111/137 (81%)
Frame = +3 / +2
Query: 1572 FAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVL 1751
+ ++PDA +V+ GFSY IV VGE PY E GD++NLTIP G T++ VC +++C+ +L
Sbjct: 2 YQQNPDANYVKEQGFSYGIVVVGEAPYAEMFGDNLNLTIPMGGGDTIKNVCGSLKCLVIL 181
Query: 1752 ISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNY 1931
ISGRP+VI+P+L +DA VAAWLPGTEG+GVTDV+FGDY F GKLPRTWFR+VDQLPMN
Sbjct: 182 ISGRPLVIEPYLPLVDAFVAAWLPGTEGRGVTDVIFGDYDFEGKLPRTWFRNVDQLPMNV 361
Query: 1932 GDAHYDPLFPLGFGLTT 1982
GD Y PLFPLGFGLTT
Sbjct: 362 GDKRYHPLFPLGFGLTT 412
Score = 127 bits (272), Expect = 3e-028
Identities = 65/118 (55%), Positives = 70/118 (59%)
Frame = -2 / -3
Query: 1936 SP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTGRP 1757
SP F+GS ST LNHV GSFP *SP TSVTP PSVPGS AAT AS R G IT+G P
Sbjct: 366 SPTFMGS*STFLNHVLGSFPSKS*SPKITSVTPRPSVPGSHAATKASTNGRYGSITSGLP 187
Query: 1756 LMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
+ H HT V P GIV+ LSP +S G SPT TI YE P T ASG
Sbjct: 186 DIKITRHFNDPHTFLIVSPPPMGIVKLRLSPNISA*GASPTTTIPYENPCSFT*FASG 13
>gb|AW754572.1|AW754572 PC03H01 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC03H01, mRNA sequence
Length = 505
Score = 230 bits (497), Expect = 3e-059
Identities = 88/124 (70%), Positives = 103/124 (83%)
Frame = +3 / +3
Query: 1611 GFSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLG 1790
GFSYAIV VGE PY ET GD++NLTIP G T+ VC +V+C+ +L+SGRP+VI P+L
Sbjct: 6 GFSYAIVVVGEAPYAETAGDNLNLTIPLGGDDTINNVCGSVKCLVILVSGRPLVITPYLP 185
Query: 1791 AMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGF 1970
++A VAAWLPG+EGQGVTDV+FGDYGF GKL RTWF+SVDQLPMN GD HYDPLFP GF
Sbjct: 186 LVEAFVAAWLPGSEGQGVTDVIFGDYGFQGKLSRTWFKSVDQLPMNVGDKHYDPLFPFGF 365
Query: 1971 GLTT 1982
GLTT
Sbjct: 366 GLTT 377
Score = 135 bits (289), Expect = 1e-030
Identities = 64/111 (57%), Positives = 69/111 (62%)
Frame = -2 / -1
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGS ST LNHV SFP P*SP TSVTPWPS PGS AAT AS R G IT+G
Sbjct: 337 CLSPTFIGS*STLLNHVLESFPWKP*SPKITSVTPWPSDPGSHAATKASTNGR*GVITSG 158
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKP 1610
P H T HT+ V P G+V+ LSP VS G SPT T+AYE P
Sbjct: 157 LPDTKITRHFTEPHTLLIVSSPPKGMVKLRLSPAVSA*GASPTTTMAYENP 5
>gb|BE431385.1|BE431385 NXNV_181_F03_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_181_F03 5' similar to Arabidopsis thaliana sequence
At5g20950 beta-D-glucan exohydrolase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 456
Score = 215 bits (465), Expect = 7e-055
Identities = 90/149 (60%), Positives = 109/149 (73%)
Frame = +3 / +2
Query: 870 QGLISIHMPAYLDALRKGFSTVMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWE 1049
QGL +IHM Y DA+ KG ST+M+SYSSWNG KMHANH L++ LK +L F+GF ISDW+
Sbjct: 8 QGLFNIHMTPYFDAIAKGVSTIMVSYSSWNGQKMHANHFLVSQVLKKQLGFKGFVISDWQ 187
Query: 1050 GIDRVTSPPGANYSYSVQASILAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRIDDAVT 1229
GIDR+TSPP ANYS SV + AG+DM+M P+N+ +FI+ LT V G I MS I+DAV
Sbjct: 188 GIDRITSPPDANYSLSVLDGVGAGIDMVMXPDNFTDFISDLTSQVKGGFISMSXINDAVQ 367
Query: 1230 RILRVKFTMGLFENPMPDPSLADQLGKQE 1316
RILRVKFTMGL M D SL QL +E
Sbjct: 368 RILRVKFTMGLXXXXMADXSLXXQLXSKE 454
Score = 135 bits (289), Expect = 1e-030
Identities = 73/148 (49%), Positives = 85/148 (57%)
Frame = -2 / -1
Query: 1315 SCFPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGT 1136
S SW RL S + PMVN T +I TAS I L+ + P T VR ++K L G
Sbjct: 453 SLLXSWXXRLXSAIXCXXSPMVNFTLKIL*TASFIXLMEMXPPLTCEVRSLIKSVKLSGX 274
Query: 1135 MIMSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPF 956
+ MS PA + T+ E* A GGLV LS+P QSEI KP K S R R WLACI PF
Sbjct: 273 ITMSIPAPTPSKTDKE*LASGGLVILSIPCQSEITKPLKPSCFFRT*ETRKWLACIFCPF 94
Query: 955 QLE*EIMTVEKPLRSASR*AGMWMLIRP 872
QLE*E + VE PL AS+* MWML P
Sbjct: 93 QLE*ETIMVETPLAMASK*GVMWMLNNP 10
>gb|BF516660.1|BF516660 NXSI_001_G06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_001_G06 5' similar to Arabidopsis thaliana
sequence At5g20950 beta-D-glucan exohydrolase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 422
Score = 212 bits (457), Expect = 9e-054
Identities = 88/133 (66%), Positives = 102/133 (76%)
Frame = +3 / +2
Query: 1293 ADQLGKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGYQCGG 1472
A+QLG +EHRDLAREAVRKSLVLLKNGK PLLPL K A +ILVAG+H DNLGYQCGG
Sbjct: 2 ANQLGSKEHRDLAREAVRKSLVLLKNGKSASQPLLPLNKNAPKILVAGTHPDNLGYQCGG 181
Query: 1473 WTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPY 1652
WTIEWQG L A+++AV STEVV+ ++PDA +V+ GFSYAIV VGE PY
Sbjct: 182 WTIEWQGLSGNITIGTTILSAIQSAVSSSTEVVYQQNPDANYVKEQGFSYAIVVVGEPPY 361
Query: 1653 TETKGDSMNLTIP 1691
TE GD++NLTIP
Sbjct: 362 TEMFGDNLNLTIP 400
Score = 95.9 bits (203), Expect(2) = 4e-029
Identities = 41/66 (62%), Positives = 45/66 (68%)
Frame = -2 / -3
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
CHSIVHPPH PRLS +PATRIL AFL +GS G PF + T D TAS A+SLCS
Sbjct: 198 CHSIVHPPH**PRLSG*VPATRILGAFLFKGSKGWLADFPFFNKTKDFLTASLAKSLCSL 19
Query: 1309 FPSWSA 1292
PSW A
Sbjct: 18 LPSWLA 1
Score = 54.2 bits (112), Expect(2) = 4e-029
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = -2 / -3
Query: 1690 GIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASGLSANTTSVDGSTAAFTA 1532
G+V+ LSP +SV G SPT TIAYE P LT ASG TTSV+ TA + A
Sbjct: 399 GMVKLRLSPNISV*GGSPTTTIAYENPCSLT*FASGFC**TTSVEELTADWIA 241
>gb|AW290744.1|AW290744 NXNV046D07F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV046D07 5', mRNA sequence
Length = 391
Score = 207 bits (447), Expect = 2e-052
Identities = 81/117 (69%), Positives = 96/117 (82%)
Frame = +3 / +3
Query: 1623 AIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDA 1802
AIV VGE PY ET GD++NLTIP G T++TVC +++C+ +LISGRP+VI+P+L +DA
Sbjct: 3 AIVVVGEAPYAETFGDNLNLTIPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPLVDA 182
Query: 1803 VVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGFG 1973
VAAWLPGTEGQGVTDV+FGDY F GKL RTWF+SVDQLPMN D HY LFPLGFG
Sbjct: 183 FVAAWLPGTEGQGVTDVIFGDYRFXGKLARTWFKSVDQLPMNIXDXHYXXLFPLGFG 353
Score = 119 bits (255), Expect = 7e-026
Identities = 59/107 (55%), Positives = 64/107 (59%)
Frame = -2 / -1
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C S FIGS ST LNHV S P *SP TSVTPWPSVPGS AAT AS R G IT+G
Sbjct: 322 CXSXMFIGS*STLLNHVLASLPXKR*SPKITSVTPWPSVPGSHAATKASTNGR*GSITSG 143
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIA 1622
P + H TV V P G+V+ LSP VS YG SPT T+A
Sbjct: 142 LPDIKITRHFKEPQTVLIVSPPPRGMVKLRLSPNVSAYGASPTTTMA 2
>gb|CD027404.1|CD027404 NXNV046D07 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV046D07 5' similar to Arabidopsis thaliana sequence
At5g20950 beta-D-glucan exohydrolase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 391
Score = 207 bits (447), Expect = 2e-052
Identities = 81/117 (69%), Positives = 96/117 (82%)
Frame = +3 / +3
Query: 1623 AIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDA 1802
AIV VGE PY ET GD++NLTIP G T++TVC +++C+ +LISGRP+VI+P+L +DA
Sbjct: 3 AIVVVGEAPYAETFGDNLNLTIPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPLVDA 182
Query: 1803 VVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGFG 1973
VAAWLPGTEGQGVTDV+FGDY F GKL RTWF+SVDQLPMN D HY LFPLGFG
Sbjct: 183 FVAAWLPGTEGQGVTDVIFGDYRFXGKLARTWFKSVDQLPMNIXDXHYXXLFPLGFG 353
Score = 119 bits (255), Expect = 7e-026
Identities = 59/107 (55%), Positives = 64/107 (59%)
Frame = -2 / -1
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C S FIGS ST LNHV S P *SP TSVTPWPSVPGS AAT AS R G IT+G
Sbjct: 322 CXSXMFIGS*STLLNHVLASLPXKR*SPKITSVTPWPSVPGSHAATKASTNGR*GSITSG 143
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIA 1622
P + H TV V P G+V+ LSP VS YG SPT T+A
Sbjct: 142 LPDIKITRHFKEPQTVLIVSPPPRGMVKLRLSPNVSAYGASPTTTMA 2
>gb|DR169308.1|DR169308 RTPHOS1_31_B02.g1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_31_B02_A029 5', mRNA sequence
Length = 433
Score = 160 bits (345), Expect(2) = 4e-052
Identities = 66/101 (65%), Positives = 77/101 (76%)
Frame = +3 / +2
Query: 1272 PMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPLPKKAARILVAGSHADN 1451
P+ +PSL +QLG + HR+LAREAVRKSLVLLKNGK PLLPL K AA+ILVAG+HADN
Sbjct: 131 PVANPSLVNQLGNKVHRELAREAVRKSLVLLKNGKSASKPLLPLNKNAAKILVAGTHADN 310
Query: 1452 LGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVF 1574
LGYQCGGWTI WQG L+A+K+ V PSTEVV+
Sbjct: 311 LGYQCGGWTITWQGLSGNSTKGTTILEAIKSTVSPSTEVVY 433
Score = 104 bits (222), Expect(2) = 1e-027
Identities = 44/73 (60%), Positives = 48/73 (65%)
Frame = -2 / -2
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
C IVHPPH PRLSAW+PATRI AAFL +GS G PF +ST D TAS A SLC+
Sbjct: 348 CQVIVHPPH**PRLSAWVPATRIFAAFLFKGSKGLLADFPFFNSTRDFLTASLANSLCTL 169
Query: 1309 FPSWSARLGSGMG 1271
PSW RLG G
Sbjct: 168 LPSWLTRLGLATG 130
Score = 66.1 bits (138), Expect(2) = 4e-052
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +3 / +1
Query: 1146 NYQNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENP 1274
+Y +FI+ LT V SGLI M R +DAV RILRVKFTMGLFE+P
Sbjct: 4 HYTDFISNLTSQVKSGLISMPRRNDAVRRILRVKFTMGLFEHP 132
Score = 40.5 bits (82), Expect(2) = 1e-027
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = -2 / -3
Query: 1276 MGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMK 1157
+G S PMVN T +I TAS +L + I+PL T VR+++K
Sbjct: 134 LGCSKSPMVNFTLKILRTASFLLGMEIKPLLTCEVRLLIK 15
>gb|BE762088.1|BE762088 NXCI_076_H01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_076_H01 5' similar to Arabidopsis
thaliana sequence At5g20950 beta-D-glucan
exohydrolase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 380
Score = 193 bits (417), Expect = 3e-048
Identities = 80/126 (63%), Positives = 95/126 (75%)
Frame = +3 / +3
Query: 1224 VTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPL 1403
V RILRVKFTMGLFE+PM +PSLA+QLG + HR+LAREAVRKSLVLLKNGK PLLPL
Sbjct: 3 VRRILRVKFTMGLFEHPMANPSLANQLGSKAHRELAREAVRKSLVLLKNGKSDSKPLLPL 182
Query: 1404 PKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAES 1583
K A +ILVAG+H DNLGYQC GWTI WQG L+A+++A P+TE + E+
Sbjct: 183 DKNATKILVAGTHPDNLGYQCXGWTITWQGLSGNTTKGTTILEAIQSAXSPTTEXXYQEN 362
Query: 1584 PDAEFV 1601
PDA +V
Sbjct: 363 PDANYV 380
Score = 113 bits (242), Expect = 4e-024
Identities = 50/86 (58%), Positives = 55/86 (63%)
Frame = -2 / -2
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
CH IVHP H PRLS +PATRIL AFL +GS G PF + T D TAS A SLC+
Sbjct: 268 CHVIVHPXH**PRLSG*VPATRILVAFLSKGSKGLLSDFPFFNKTRDFLTASLANSLCAL 89
Query: 1309 FPSWSARLGSGMGFSNRPMVNLTRRI 1232
PSW ARLG +G S PMVN T RI
Sbjct: 88 LPSWLARLGFAIGCSKSPMVNFTLRI 11
>gb|CF666393.1|CF666393 RTCNT1_23_A10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_23_A10_A029 3', mRNA sequence
Length = 696
Score = 191 bits (411), Expect = 2e-047
Identities = 73/100 (73%), Positives = 86/100 (86%)
Frame = +3 / +2
Query: 1677 NLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVL 1856
NLTIP G T++TVC +++C+ +LISGRP+VI+P+L +DA VAAWLPGTEGQGVTDV+
Sbjct: 2 NLTIPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPLVDAFVAAWLPGTEGQGVTDVI 181
Query: 1857 FGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGFGL 1976
FGDY F GKL RTWF+SVDQLPMN GD HYDPLFPLGFGL
Sbjct: 182 FGDYRFQGKLARTWFKSVDQLPMNIGDQHYDPLFPLGFGL 301
>gb|DR068670.1|DR068670 RTDK1_2_E04.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_2_E04_A029 3', mRNA sequence
Length = 394
Score = 187 bits (403), Expect = 3e-046
Identities = 72/104 (69%), Positives = 86/104 (82%)
Frame = +3 / +3
Query: 1668 DSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVT 1847
D+ NLTIP G T++ V +++C+ +LISGRP+VI+P+L +DA V AWL G EGQGVT
Sbjct: 3 DNFNLTIPLSGGDTIKNVWGSLKCLVILISGRPLVIKPYLPLVDAFVDAWLSGIEGQGVT 182
Query: 1848 DVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGFGLT 1979
DV+FGDYGF GKLPRTWF+SVDQLPMN GD HYDPLFPLGFGLT
Sbjct: 183 DVIFGDYGFQGKLPRTWFKSVDQLPMNVGDKHYDPLFPLGFGLT 314
Score = 105 bits (224), Expect = 1e-021
Identities = 49/92 (53%), Positives = 57/92 (61%)
Frame = -2 / -1
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP F+G+WST LNHV GSFP NP*SP TSVTPWPS+P S A+T AS R G IT+G
Sbjct: 277 CLSPTFMGNWSTLLNHVLGSFP*NP*SPKITSVTPWPSMPESHASTKASTNGR*GLITSG 98
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLS 1667
P + H T V P G+V+ LS
Sbjct: 97 LPDIKITRHFKDPQTFLIVSPPLKGMVKLKLS 2
>gb|BF518339.1|BF518339 NXSI_038_B12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_038_B12 5' similar to Arabidopsis thaliana
sequence At5g20950 beta-D-glucan exohydrolase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 364
Score = 169 bits (364), Expect = 6e-041
Identities = 65/97 (67%), Positives = 79/97 (81%)
Frame = +3 / +2
Query: 1686 IPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGD 1865
IP G T++TVC +++C+ +LISGRP+VI+P+L +DA VAAWLPGTEGQGVTDV+FGD
Sbjct: 2 IPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPLVDAFVAAWLPGTEGQGVTDVIFGD 181
Query: 1866 YGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGFGL 1976
Y F GKL RTWF++V LPMN GD HY LFPLGFGL
Sbjct: 182 YRFQGKLARTWFKNVXXLPMNIGDQHYXXLFPLGFGL 292
>gb|CO162092.1|CO162092 FLD1_33_D11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_33_D11_A029 3', mRNA sequence
Length = 644
Score = 167 bits (360), Expect = 2e-040
Identities = 63/83 (75%), Positives = 74/83 (89%)
Frame = +3 / +1
Query: 1728 AVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRS 1907
+++C+ +LISGRP+VI+P+L +DA VAAWLPGTEGQGVTDV+FGDY F GKL RTWF+S
Sbjct: 1 SLKCLVILISGRPLVIEPYLPLVDAFVAAWLPGTEGQGVTDVIFGDYRFQGKLARTWFKS 180
Query: 1908 VDQLPMNYGDAHYDPLFPLGFGL 1976
VDQLPMN GD HYDPLFPLGFGL
Sbjct: 181 VDQLPMNIGDQHYDPLFPLGFGL 249
>gb|AW064907.1|AW064907 ST37C08 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST37C08, mRNA sequence
Length = 578
Score = 144 bits (308), Expect = 3e-033
Identities = 55/73 (75%), Positives = 61/73 (83%)
Frame = +3 / +2
Query: 1764 PVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAH 1943
P+V +P+L +DA VAAWLPGTEGQGVTDV+FGDY F GKL RTWF+S DQLPMN GD
Sbjct: 2 PLVTEPYLPLVDAFVAAWLPGTEGQGVTDVIFGDYSFQGKLSRTWFKSADQLPMNAGDQQ 181
Query: 1944 YDPLFPLGFGLTT 1982
YDP FPLGFGLTT
Sbjct: 182 YDPQFPLGFGLTT 220
>gb|AW064668.1|AW064668 ST34C05 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST34C05, mRNA sequence
Length = 531
Score = 85.8 bits (181), Expect(2) = 1e-024
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = +3 / +3
Query: 201 YQDASKDVEVRVRDLLARMTLAEKVGQMTQIERIVASPQALRDYYIXXXXXXXXXVPRKQ 380
Y+D S+ + RV DLLARM+L EK+GQMTQIER VA+P + +YYI P Q
Sbjct: 207 YKDPSQPISARVDDLLARMSLEEKIGQMTQIERSVATPDVMTNYYIGSVLSGGGSAPAPQ 386
Query: 381 ATAAEWVAMVSDFQK 425
A+ A W MV +K
Sbjct: 387 ASPATWXXMVDGLKK 431
Score = 49.2 bits (101), Expect(2) = 1e-024
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3 / +2
Query: 420 QKACLSTRLGIPMIYGIDAVHGHNNVYGATIFPHN 524
Q+ C+ T+L +PMIYGIDAV GAT PHN
Sbjct: 425 QEGCMGTKLQVPMIYGIDAVMXTTMSMGATXLPHN 529
>gb|CF477873.1|CF477873 RTWW3_13_H10.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_13_H10_A022 5', mRNA sequence
Length = 196
Score = 103 bits (219), Expect = 6e-021
Identities = 42/64 (65%), Positives = 47/64 (73%)
Frame = +3 / +2
Query: 741 PQNFTSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRK 920
P N T G+PF A + VAACAKHFVGDGGT GINENNT+I +GL IHM AY DA+ K
Sbjct: 5 PANSTKGVPFLAVQSNVAACAKHFVGDGGTTEGINENNTVISYKGLEHIHMAAYFDAIAK 184
Query: 921 GFST 932
G ST
Sbjct: 185 GVST 196
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 818,210,644
Number of Sequences: 355925
Number of extensions: 10422719
Number of successful extensions: 57264
Number of sequences better than 1.0e-020: 56
length of database: 72,425,745
effective HSP length: 55
effective length of database: 52,849,870
effective search space used: 36360710560
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)