TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437687.2.1
(1171 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX648594.1|CX648594 COLD1_29_D11.g1_A029 Root cold Pinus... 367 e-101
gb|DR742067.1|DR742067 RTCU1_1_B09.g1_A029 Roots plus added... 367 e-101
gb|DR163235.1|DR163235 RTFE1_41_E12.g1_A029 Roots minus iro... 328 4e-089
gb|CO172418.1|CO172418 NDL1_29_D02.g1_A029 Needles control ... 325 5e-088
gb|DR163745.1|DR163745 RTFE1_44_D12.g1_A029 Roots minus iro... 325 5e-088
gb|CF475910.1|CF475910 RTWW2_15_D07.g1_A021 Well-watered lo... 314 1e-084
gb|CF400653.1|CF400653 RTWW1_6_A01.g1_A015 Well-watered lob... 312 4e-084
gb|CO361435.1|CO361435 NDL2_4_G08.g1_A029 Needles control 2... 309 2e-083
gb|DR163481.1|DR163481 RTFE1_43_D12.b1_A029 Roots minus iro... 305 3e-082
gb|DR163147.1|DR163147 RTFE1_41_E12.b1_A029 Roots minus iro... 304 6e-082
gb|BG039378.1|BG039378 NXSI_098_D11_F NXSI (Nsf Xylem Side ... 301 6e-081
gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from lobl... 231 3e-080
gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblo... 231 3e-080
gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo li... 229 8e-080
gb|DT639052.1|DT639052 EST1153983 Normalized pine embryo li... 297 1e-079
gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine r... 228 2e-079
gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus... 226 2e-078
gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds 222 7e-078
gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds 222 7e-078
gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds 222 9e-078
gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds 222 9e-078
gb|DT632413.1|DT632413 EST1147344 Normalized pine embryo li... 219 2e-077
gb|CO361349.1|CO361349 NDL2_4_G08.b1_A029 Needles control 2... 289 2e-077
gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds 219 2e-076
gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus... 231 2e-076
gb|CX650703.1|CX650703 COLD1_47_B12.g1_A029 Root cold Pinus... 220 2e-076
gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response R... 232 2e-076
gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch... 232 2e-076
gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control P... 232 2e-076
gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for... 215 3e-076
gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed... 231 4e-076
gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus mag... 229 6e-076
gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism... 218 6e-076
gb|CO367410.1|CO367410 RTK1_34_D03.b1_A029 Roots minus pota... 231 3e-075
gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus m... 215 5e-075
gb|DR097316.1|DR097316 STRR1_33_H05.g3_A033 Stem Response R... 217 1e-074
gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from lobl... 225 2e-074
gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from lobl... 223 2e-074
gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo li... 211 2e-074
gb|DR163657.1|DR163657 RTFE1_44_D12.b1_A029 Roots minus iro... 276 2e-073
gb|DR180723.1|DR180723 RTMNUT1_34_A06.g1_A029 Roots minus m... 119 3e-073
gb|CO368748.1|CO368748 RTK1_42_C07.g1_A029 Roots minus pota... 221 8e-073
gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control P... 220 2e-072
gb|CO367487.1|CO367487 RTK1_34_D03.g1_A029 Roots minus pota... 216 4e-072
gb|DR050310.1|DR050310 RTBOR1_22_D04.g1_A029 Roots plus add... 215 7e-072
gb|DR683982.1|DR683982 EST1074058 Normalized pine embryo li... 228 1e-071
gb|DT631935.1|DT631935 EST1146866 Normalized pine embryo li... 228 1e-071
gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo li... 216 1e-071
gb|DR070312.1|DR070312 RTDK1_12_C03.g1_A029 Roots, dark Pin... 204 1e-071
gb|DT637181.1|DT637181 EST1152112 Normalized pine embryo li... 269 3e-071
gb|CF476071.1|CF476071 RTWW2_16_D03.g1_A021 Well-watered lo... 226 4e-071
gb|CO171305.1|CO171305 NDL1_20_C09.g1_A029 Needles control ... 239 7e-071
gb|DR096360.1|DR096360 STRR1_27_B05.g1_A033 Stem Response R... 232 2e-070
gb|DR019211.1|DR019211 STRS1_28_B06.g1_A034 Shoot tip pitch... 196 4e-070
gb|CV144435.1|CV144435 EST855644 Sequencing ESTs from loblo... 209 4e-070
gb|DR093671.1|DR093671 STRR1_9_E07.g1_A033 Stem Response Re... 206 3e-069
gb|CO369598.1|CO369598 RTK1_48_F01.b1_A029 Roots minus pota... 218 5e-068
gb|DT632636.1|DT632636 EST1147567 Normalized pine embryo li... 165 3e-067
gb|CF479898.1|CF479898 RTWW3_12_H04.g1_A022 Well-watered lo... 226 5e-067
gb|DR692432.1|DR692432 EST1082520 Normalized pine embryo li... 202 6e-067
gb|DR098553.1|DR098553 STRR1_46_F12.b1_A033 Stem Response R... 226 2e-066
gb|DR051834.1|DR051834 RTBOR1_32_E10.g1_A029 Roots plus add... 197 2e-066
gb|DR745029.1|DR745029 RTCU1_26_C03.g1_A029 Roots plus adde... 226 2e-065
gb|DR120161.1|DR120161 RTMG1_27_H07.g2_A029 Roots minus mag... 182 3e-065
gb|DR168662.1|DR168662 RTPHOS1_27_B09.b1_A029 Roots minus p... 248 6e-065
gb|DR071475.1|DR071475 RTDK1_20_C09.b1_A029 Roots, dark Pin... 246 2e-064
gb|DT633920.1|DT633920 EST1148851 Normalized pine embryo li... 155 1e-063
gb|DR165660.1|DR165660 RTPHOS1_6_B10.g1_A029 Roots minus ph... 231 8e-063
gb|DR694543.1|DR694543 EST1084635 Normalized pine embryo li... 240 2e-062
gb|CF666895.1|CF666895 RTCNT1_26_G11.g1_A029 Root control P... 239 2e-062
gb|CF477384.1|CF477384 RTWW3_7_A01.g1_A022 Well-watered lob... 182 7e-062
gb|CF402042.1|CF402042 RTWW1_16_F09.g1_A015 Well-watered lo... 237 2e-061
gb|CF386766.1|CF386766 RTDR1_16_C08.g1_A015 Loblolly pine r... 235 6e-061
gb|CF400637.1|CF400637 RTWW1_6_B06.g1_A015 Well-watered lob... 235 6e-061
gb|DR168497.1|DR168497 RTPHOS1_25_G11.g1_A029 Roots minus p... 174 1e-059
gb|BF609490.1|BF609490 NXSI_043_C03_F NXSI (Nsf Xylem Side ... 160 4e-059
gb|DR055601.1|DR055601 RTCA1_24_E10.g2_A029 Roots minus cal... 174 8e-059
gb|DR023285.1|DR023285 STRS1_56_D02.g1_A034 Shoot tip pitch... 227 1e-058
gb|DR692513.1|DR692513 EST1082601 Normalized pine embryo li... 227 1e-058
gb|CO362158.1|CO362158 RTK1_1_E05.g1_A029 Roots minus potas... 226 2e-058
gb|CX652556.1|CX652556 COLD1_59_H02.g1_A029 Root cold Pinus... 226 2e-058
gb|CX713463.1|CX713463 RTPQ1_9_C04.g1_A032 Roots treated wi... 226 2e-058
gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pin... 226 2e-058
gb|DR099166.1|DR099166 STRR1_53_C12.g1_A033 Stem Response R... 226 2e-058
gb|DR113034.1|DR113034 RTS1_32_B12.g1_A029 Roots minus sulf... 226 2e-058
gb|DR163422.1|DR163422 RTFE1_42_G07.g1_A029 Roots minus iro... 226 2e-058
gb|BX254474.1|BX254474 BX254474 Pinus pinaster differenciat... 226 2e-058
gb|CO200976.1|CO200976 RTCNT2_2_G03.g1_A029 Root control 2 ... 226 2e-058
gb|DR072178.1|DR072178 RTDK1_24_C09.g1_A029 Roots, dark Pin... 226 2e-058
gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch ... 226 3e-058
gb|DT636492.1|DT636492 EST1151423 Normalized pine embryo li... 225 6e-058
gb|DR093057.1|DR093057 STRR1_5_F06.g1_A033 Stem Response Re... 224 1e-057
gb|CF663902.1|CF663902 RTCNT1_5_H12.g1_A029 Root control Pi... 157 2e-057
gb|DR056635.1|DR056635 RTCA1_31_C07.g1_A029 Roots minus cal... 169 2e-057
gb|CX646780.1|CX646780 COLD1_11_B06.g1_A029 Root cold Pinus... 221 8e-057
gb|DR119331.1|DR119331 RTMG1_22_C11.g1_A029 Roots minus mag... 215 3e-055
gb|DR687528.1|DR687528 EST1077610 Normalized pine embryo li... 155 5e-055
gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus... 215 7e-055
gb|BG275593.1|BG275593 NXSI_143_F09_F NXSI (Nsf Xylem Side ... 213 2e-054
gb|CO166169.1|CO166169 FLD1_59_G05.g1_A029 Root flooded Pin... 163 9e-054
gb|DR096273.1|DR096273 STRR1_26_H05.g1_A033 Stem Response R... 210 1e-053
gb|DR090373.1|DR090373 RTAL1_14_D02.g1_A029 Roots plus adde... 186 4e-053
gb|BM427751.1|BM427751 NXRV_002_G05_F NXRV (Nsf Xylem Root ... 139 4e-053
gb|CF668454.1|CF668454 RTCNT1_36_C09.g1_A029 Root control P... 201 2e-052
gb|DR119250.1|DR119250 RTMG1_22_C11.b1_A029 Roots minus mag... 204 1e-051
gb|CF400025.1|CF400025 RTWW1_2_C11.g1_A015 Well-watered lob... 80 1e-050
gb|DR111040.1|DR111040 RTS1_14_G09.g1_A029 Roots minus sulf... 200 1e-050
gb|BQ198383.1|BQ198383 NXLV130_C02_F NXLV (Nsf Xylem Late w... 186 2e-050
gb|DR011201.1|DR011201 HEAT1_4_E06.b1_A029 Root at 37 C for... 199 2e-050
gb|DR055148.1|DR055148 RTCA1_21_G09.g2_A029 Roots minus cal... 199 2e-050
gb|CX650764.1|CX650764 COLD1_48_A05.b1_A029 Root cold Pinus... 199 3e-050
gb|CF386668.1|CF386668 RTDR1_16_C08.b1_A015 Loblolly pine r... 195 6e-049
gb|CO362167.1|CO362167 RTK1_1_F05.g1_A029 Roots minus potas... 190 1e-047
gb|BX250040.1|BX250040 BX250040 Pinus pinaster differenciat... 123 2e-047
gb|DR051531.1|DR051531 RTBOR1_30_E09.g1_A029 Roots plus add... 190 2e-047
gb|CF475767.1|CF475767 RTWW2_15_D07.b1_A021 Well-watered lo... 188 9e-047
gb|DR054266.1|DR054266 RTCA1_16_F08.b1_A029 Roots minus cal... 188 9e-047
gb|CF668487.1|CF668487 RTCNT1_36_F12.g1_A029 Root control P... 187 2e-046
gb|DR011619.1|DR011619 HEAT1_6_G09.g1_A029 Root at 37 C for... 187 2e-046
gb|DR024833.1|DR024833 STRS1_67_F03.g1_A034 Shoot tip pitch... 187 2e-046
gb|CV035603.1|CV035603 RTNACL1_41_D10.b1_A029 Roots plus ad... 132 4e-046
gb|CR393417.1|CR393417 CR393417 RN Pinus pinaster cDNA clon... 185 6e-046
gb|AW290718.1|AW290718 NXNV046B02F Nsf Xylem Normal wood Ve... 183 2e-045
gb|CD027376.1|CD027376 NXNV046B02 Nsf Xylem Normal wood Ver... 183 2e-045
gb|CF386013.1|CF386013 RTDR1_7_F11.g1_A015 Loblolly pine ro... 183 2e-045
gb|DR080162.1|DR080162 RTFEPL1_20_E11.g1_A029 Roots plus ad... 181 1e-044
gb|CF668214.1|CF668214 RTCNT1_35_D04.b1_A029 Root control P... 180 1e-044
gb|CV035793.1|CV035793 RTNACL1_42_B01.g1_A029 Roots plus ad... 180 2e-044
gb|CF471900.1|CF471900 RTDS1_7_A08.b1_A015 Drought-stressed... 179 3e-044
gb|DR050231.1|DR050231 RTBOR1_22_D04.b1_A029 Roots plus add... 179 3e-044
gb|BF518096.1|BF518096 NXSI_030_H10_F NXSI (Nsf Xylem Side ... 110 6e-044
gb|DR055444.1|DR055444 RTCA1_23_E11.g2_A029 Roots minus cal... 124 9e-044
gb|DR053875.1|DR053875 RTCA1_13_G12.g1_A029 Roots minus cal... 119 3e-043
gb|CF477424.1|CF477424 RTWW3_7_B01.g1_A022 Well-watered lob... 119 3e-043
gb|CO201071.1|CO201071 RTCNT2_3_A06.g1_A029 Root control 2 ... 173 2e-042
gb|DR100574.1|DR100574 STRR1_65_E02.b1_A033 Stem Response R... 173 2e-042
gb|CF391890.1|CF391890 RTDR3_10_G01.g1_A022 Loblolly pine r... 172 3e-042
gb|DR010784.1|DR010784 HEAT1_1_F12.b1_A029 Root at 37 C for... 172 3e-042
gb|DR092307.1|DR092307 RTAL1_28_G05.b1_A029 Roots plus adde... 172 3e-042
gb|DR100599.1|DR100599 STRR1_65_E02.g1_A033 Stem Response R... 172 4e-042
gb|DR015200.1|DR015200 STRS1_2_C05.b1_A034 Shoot tip pitch ... 171 1e-041
gb|CV138360.1|CV138360 EST849569 Sequencing ESTs from loblo... 115 1e-041
gb|DR120128.1|DR120128 RTMG1_27_E05.g2_A029 Roots minus mag... 169 4e-041
gb|AW011524.1|AW011524 ST21H02 Pine TriplEx shoot tip libra... 168 8e-041
gb|DR100138.1|DR100138 STRR1_62_B05.b1_A033 Stem Response R... 168 8e-041
gb|DR102735.1|DR102735 STRR1_83_A06.g1_A033 Stem Response R... 168 8e-041
gb|DR055518.1|DR055518 RTCA1_24_E10.b1_A029 Roots minus cal... 167 1e-040
gb|CF474408.1|CF474408 RTWW2_20_A09.g1_A021 Well-watered lo... 166 3e-040
gb|DR746394.1|DR746394 RTCU1_36_E04.g1_A029 Roots plus adde... 166 3e-040
gb|BF609081.1|BF609081 NXSI_040_B10_F NXSI (Nsf Xylem Side ... 165 7e-040
gb|CX650634.1|CX650634 COLD1_47_B12.b1_A029 Root cold Pinus... 164 1e-039
gb|DR092975.1|DR092975 STRR1_5_F06.b1_A033 Stem Response Re... 164 1e-039
gb|BE049743.1|BE049743 NXNV_143_C08_F Nsf Xylem Normal wood... 163 3e-039
gb|BF186094.1|BF186094 NXCI_132_F04_F NXCI (Nsf Xylem Compr... 161 7e-039
gb|DR098461.1|DR098461 STRR1_45_E01.g1_A033 Stem Response R... 161 7e-039
gb|DT635613.1|DT635613 EST1150544 Normalized pine embryo li... 56 7e-039
gb|CO171240.1|CO171240 NDL1_20_C09.b1_A029 Needles control ... 150 7e-039
gb|CF400511.1|CF400511 RTWW1_6_B06.b1_A015 Well-watered lob... 159 3e-038
gb|CO169428.1|CO169428 NDL1_7_B04.b1_A029 Needles control P... 154 1e-036
gb|CO368672.1|CO368672 RTK1_42_C07.b1_A029 Roots minus pota... 153 3e-036
gb|DR689717.1|DR689717 EST1079803 Normalized pine embryo li... 56 8e-036
gb|CF396870.1|CF396870 RTDS2_24_A10.g1_A021 Drought-stresse... 150 1e-035
gb|DR090297.1|DR090297 RTAL1_14_D02.b1_A029 Roots plus adde... 149 3e-035
gb|DR112973.1|DR112973 RTS1_32_B12.b1_A029 Roots minus sulf... 149 3e-035
gb|DR090465.1|DR090465 RTAL1_15_E12.b1_A029 Roots plus adde... 149 4e-035
gb|CF399941.1|CF399941 RTWW1_2_C11.b1_A015 Well-watered lob... 149 5e-035
gb|DR071242.1|DR071242 RTDK1_18_C12.g1_A029 Roots, dark Pin... 86 7e-035
gb|DR024751.1|DR024751 STRS1_67_F03.b1_A034 Shoot tip pitch... 148 9e-035
gb|DR071171.1|DR071171 RTDK1_18_C12.b1_A029 Roots, dark Pin... 148 9e-035
gb|CX649869.1|CX649869 COLD1_42_B01.b1_A029 Root cold Pinus... 145 6e-034
gb|DR015024.1|DR015024 STRS1_1_B12.b1_A034 Shoot tip pitch ... 145 6e-034
gb|DR047687.1|DR047687 RTBOR1_2_F07.g1_A029 Roots plus adde... 143 2e-033
gb|BF778581.1|BF778581 NXSI_088_D02_F NXSI (Nsf Xylem Side ... 141 8e-033
gb|CX649395.1|CX649395 COLD1_35_B04.b1_A029 Root cold Pinus... 140 2e-032
gb|DR089298.1|DR089298 RTAL1_7_G03.g1_A029 Roots plus added... 140 2e-032
gb|CF479851.1|CF479851 RTWW3_12_D07.g1_A022 Well-watered lo... 139 3e-032
gb|DR021638.1|DR021638 STRS1_46_B05.b1_A034 Shoot tip pitch... 139 3e-032
gb|BQ107011.1|BQ107011 NXLV085_E06_F NXLV (Nsf Xylem Late w... 138 7e-032
gb|DR741991.1|DR741991 RTCU1_1_B09.b1_A029 Roots plus added... 138 1e-031
gb|AW290008.1|AW290008 NXNV009E08F Nsf Xylem Normal wood Ve... 82 2e-031
gb|CD026675.1|CD026675 NXNV009E08 Nsf Xylem Normal wood Ver... 82 2e-031
gb|DR022663.1|DR022663 STRS1_52_D06.g1_A034 Shoot tip pitch... 137 2e-031
gb|CV035673.1|CV035673 RTNACL1_41_D10.g1_A029 Roots plus ad... 132 3e-031
gb|BF517063.1|BF517063 NXSI_008_G03_F NXSI (Nsf Xylem Side ... 89 3e-031
gb|BX253271.1|BX253271 BX253271 Pinus pinaster differenciat... 133 2e-030
gb|BM158415.1|BM158415 NXLV_034_B09_F NXLV (Nsf Xylem Late ... 133 2e-030
gb|CO369680.1|CO369680 RTK1_48_F01.g1_A029 Roots minus pota... 131 8e-030
gb|BM902805.1|BM902805 NXLV_075_E10_F NXLV (Nsf Xylem Late ... 130 2e-029
gb|BX251144.1|BX251144 BX251144 Pinus pinaster differenciat... 130 2e-029
gb|DR092690.1|DR092690 STRR1_3_D06.b1_A033 Stem Response Re... 130 2e-029
gb|BF778542.1|BF778542 NXSI_085_H09_F NXSI (Nsf Xylem Side ... 129 3e-029
gb|BQ654413.1|BQ654413 NXRV080_A02_F NXRV (Nsf Xylem Root w... 90 5e-029
gb|AW698185.1|AW698185 NXNV_074_D07_F Nsf Xylem Normal wood... 128 8e-029
gb|DR096352.1|DR096352 STRR1_27_A07.g1_A033 Stem Response R... 128 8e-029
gb|DR089220.1|DR089220 RTAL1_7_G03.b1_A029 Roots plus added... 127 1e-028
gb|BX251613.1|BX251613 BX251613 Pinus pinaster differenciat... 127 1e-028
gb|BX682844.1|BX682844 BX682844 Pinus pinaster differenciat... 127 1e-028
gb|DR100480.1|DR100480 STRR1_64_A12.g1_A033 Stem Response R... 124 1e-027
gb|DR070227.1|DR070227 RTDK1_12_C03.b1_A029 Roots, dark Pin... 123 2e-027
gb|CF668373.1|CF668373 RTCNT1_36_C09.b1_A029 Root control P... 123 3e-027
gb|BE762031.1|BE762031 NXCI_076_B10_F NXCI (Nsf Xylem Compr... 122 4e-027
gb|CX651774.1|CX651774 COLD1_54_E06.g1_A029 Root cold Pinus... 86 2e-026
gb|AW985386.1|AW985386 NXNV_134_G08_F Nsf Xylem Normal wood... 117 2e-025
gb|CF385917.1|CF385917 RTDR1_7_F11.b1_A015 Loblolly pine ro... 117 2e-025
gb|DR092742.1|DR092742 STRR1_3_D06.g1_A033 Stem Response Re... 117 2e-025
gb|CF385705.1|CF385705 RTDR1_5_F10.g1_A015 Loblolly pine ro... 116 2e-025
gb|DR070096.1|DR070096 RTDK1_11_F07.b1_A029 Roots, dark Pin... 115 6e-025
gb|CO197560.1|CO197560 GEO1_7_H02.b1_A029 Root gravitropism... 114 1e-024
gb|AA556399.1|AA556399 254 Loblolly pine C Pinus taeda cDNA... 83 2e-024
gb|CF479772.1|CF479772 RTWW3_12_D07.b1_A022 Well-watered lo... 113 2e-024
gb|DR022594.1|DR022594 STRS1_52_D06.b1_A034 Shoot tip pitch... 113 2e-024
gb|CF401946.1|CF401946 RTWW1_16_F09.b1_A015 Well-watered lo... 113 3e-024
gb|DR051762.1|DR051762 RTBOR1_32_E10.b1_A029 Roots plus add... 113 3e-024
gb|DR684423.1|DR684423 EST1074500 Normalized pine embryo li... 113 3e-024
gb|CO369775.1|CO369775 RTK1_54_A10.b1_A029 Roots minus pota... 111 7e-024
gb|DR056610.1|DR056610 RTCA1_31_A02.g1_A029 Roots minus cal... 111 7e-024
gb|DR070069.1|DR070069 RTDK1_11_D01.b1_A029 Roots, dark Pin... 111 7e-024
gb|DR096283.1|DR096283 STRR1_27_A07.b1_A033 Stem Response R... 111 7e-024
gb|DR099094.1|DR099094 STRR1_53_C12.b1_A033 Stem Response R... 111 7e-024
gb|BE582419.1|BE582419 NXCI_033_B08_F NXCI (Nsf Xylem Compr... 85 1e-023
gb|CO363885.1|CO363885 RTK1_12_H12.b1_A029 Roots minus pota... 66 3e-023
gb|BF777907.1|BF777907 NXSI_078_D09_F NXSI (Nsf Xylem Side ... 108 7e-023
gb|DR072100.1|DR072100 RTDK1_24_C09.b1_A029 Roots, dark Pin... 108 9e-023
gb|DR055360.1|DR055360 RTCA1_23_E11.b1_A029 Roots minus cal... 107 1e-022
gb|AW226065.1|AW226065 ST76H11 Pine TriplEx shoot tip libra... 106 2e-022
gb|BF610570.1|BF610570 NXSI_060_B07_F NXSI (Nsf Xylem Side ... 87 3e-022
gb|DR055059.1|DR055059 RTCA1_21_G09.b1_A029 Roots minus cal... 106 3e-022
gb|AA556861.1|AA556861 703 Loblolly pine C Pinus taeda cDNA... 95 1e-021
gb|CO168791.1|CO168791 NDL1_2_C05.g1_A029 Needles control P... 99 3e-021
gb|AW290421.1|AW290421 NXNV020D02F Nsf Xylem Normal wood Ve... 103 3e-021
gb|CD027081.1|CD027081 NXNV020D02 Nsf Xylem Normal wood Ver... 103 3e-021
gb|AW290292.1|AW290292 NXNV018A05F Nsf Xylem Normal wood Ve... 102 6e-021
gb|CD026951.1|CD026951 NXNV018A05 Nsf Xylem Normal wood Ver... 102 6e-021
>gb|CX648594.1|CX648594 COLD1_29_D11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_29_D11_A029 5', mRNA sequence
Length = 862
Score = 367 bits (796), Expect = e-101
Identities = 136/221 (61%), Positives = 168/221 (76%)
Frame = -1 / +2
Query: 1003 FMASYYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKY 824
F Y +D + GACGFGDL + GYG+ T LS+ L+ G ACG C+E++CVED Y
Sbjct: 170 FATFYSESDALGTMAGACGFGDLYRQGYGVNTAALSSVLYNGGQACGACFELRCVEDPLY 349
Query: 823 CLPGTSIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRR 644
C PGTSIVVTATNFC PNYGLP D GG CNPP HF+LP+ +FEKIA+WK G M +QYRR
Sbjct: 350 CHPGTSIVVTATNFCPPNYGLPGDDGGWCNPPRQHFVLPVTAFEKIAMWKIGTMNVQYRR 529
Query: 643 VKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINC 464
V+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWGQ WH+N
Sbjct: 530 VRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWGQNWHVNA 709
Query: 463 DMRGQPLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQFL 341
D RGQ LSFE+++SDGK +TS+NV P DW++G TY GKQF+
Sbjct: 710 DYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 832
Score = 243 bits (526), Expect = 1e-063
Identities = 113/206 (54%), Positives = 130/206 (63%)
Frame = +3 / -2
Query: 336 YRRNCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHP 515
++ NCFP+ V P QS G TL V+ LPSL ++SNDR PL S L C PQ PI SHP
Sbjct: 837 FQTNCFPL*VWPNCQSEGATL*EVTVLPSLVVTSNDRAWPL*SALTCQFCPQFLPIDSHP 658
Query: 516 NSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFS 695
PL FT LT+P+P TLLIRTV+KK P NL PP+ H T YW M+P F AIFS
Sbjct: 657 VFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANLIPPTFAHRTLLYWTFMVPIFHMAIFS 478
Query: 696 NDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTMEVPGRQYLRSSTHLTS*QPPHAA 875
G K W GGL PP+S GRP*FG QK VAVTT++VPG Q SSTHL+S Q PHA
Sbjct: 477 KAVTGNTKCWRGGLHHPPSSPGRP*FGGQKFVAVTTIDVPGWQ*RGSSTHLSSKQAPHA* 298
Query: 876 PRSNSAVLSPTVAIPYPCFPRSPNPH 953
P +LS V P PC +SPNPH
Sbjct: 297 PPL*RTLLSAAVLTP*PCLYKSPNPH 220
>gb|DR742067.1|DR742067 RTCU1_1_B09.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_1_B09_A029 5', mRNA sequence
Length = 835
Score = 367 bits (796), Expect = e-101
Identities = 136/221 (61%), Positives = 168/221 (76%)
Frame = -1 / +3
Query: 1003 FMASYYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKY 824
F Y +D + GACGFGDL + GYG+ T LS+ L+ G ACG C+E++CVED Y
Sbjct: 51 FATFYSESDALGTMAGACGFGDLYRQGYGVNTAALSSVLYNGGQACGACFELRCVEDPLY 230
Query: 823 CLPGTSIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRR 644
C PGTSIVVTATNFC PNYGLP D GG CNPP HF+LP+ +FEKIA+WK G M +QYRR
Sbjct: 231 CHPGTSIVVTATNFCPPNYGLPGDDGGWCNPPRQHFVLPVTAFEKIAMWKIGTMNVQYRR 410
Query: 643 VKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINC 464
V+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWGQ WH+N
Sbjct: 411 VRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWGQNWHVNA 590
Query: 463 DMRGQPLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQFL 341
D RGQ LSFE+++SDGK +TS+NV P DW++G TY GKQF+
Sbjct: 591 DYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 713
Score = 248 bits (537), Expect = 4e-065
Identities = 114/206 (55%), Positives = 131/206 (63%)
Frame = +3 / -1
Query: 336 YRRNCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHP 515
++ NCFP+ V P QS G TL V+ LPSL ++SNDR CPL S L C PQ PI SHP
Sbjct: 718 FQTNCFPL*VWPNCQSEGATL*EVTVLPSLVVTSNDRACPL*SALTCQFCPQFLPIDSHP 539
Query: 516 NSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFS 695
PL FT LT+P+P TLLIRTV+KK P NL PP+ H T YW M+P F AIFS
Sbjct: 538 VFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANLIPPTFAHRTLLYWTFMVPIFHMAIFS 359
Query: 696 NDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTMEVPGRQYLRSSTHLTS*QPPHAA 875
G K W GGL PP+S GRP*FG QK VAVTT++VPG Q SSTHL+S Q PHA
Sbjct: 358 KAVTGNTKCWRGGLHHPPSSPGRP*FGGQKFVAVTTIDVPGWQ*RGSSTHLSSKQAPHA* 179
Query: 876 PRSNSAVLSPTVAIPYPCFPRSPNPH 953
P +LS V P PC +SPNPH
Sbjct: 178 PPL*RTLLSAAVLTP*PCLYKSPNPH 101
>gb|DR163235.1|DR163235 RTFE1_41_E12.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_41_E12_A029 5', mRNA sequence
Length = 876
Score = 328 bits (711), Expect = 4e-089
Identities = 120/184 (65%), Positives = 146/184 (79%)
Frame = -1 / +2
Query: 892 ALFERGAACGGCYEVKCVEDLKYCLPGTSIVVTATNFCAPNYGLPADAGGHCNPPNHHFL 713
A F G ACG C+E++CVED YC PGTSIVVTATNFC PNYGLP D GG CNPP HF+
Sbjct: 2 AFFHGGQACGACFELRCVEDPLYCHPGTSIVVTATNFCPPNYGLPGDDGGWCNPPRQHFV 181
Query: 712 LPIQSFEKIALWKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVK 533
LP+ +FEKIA+WK G M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK
Sbjct: 182 LPVTAFEKIAMWKIGTMNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVK 361
Query: 532 IKGTELGWLPMGRNWGQVWHINCDMRGQPLSFELSSSDGKALTSFNVVPKDWEYGKTYTG 353
+KG++ GWL MGRNWGQ WH+N D RGQ LSFE+++SDGK +TS+NV P DW++G TY G
Sbjct: 362 VKGSKTGWLSMGRNWGQNWHVNADYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKG 541
Query: 352 KQFL 341
KQF+
Sbjct: 542 KQFV 553
Score = 225 bits (486), Expect = 4e-058
Identities = 103/181 (56%), Positives = 118/181 (65%)
Frame = +3 / -1
Query: 336 YRRNCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHP 515
++ NCFP+ V P QS G TL V+ LPSL ++SNDR CPL S L C PQ PI SHP
Sbjct: 558 FQTNCFPL*VWPNCQSEGATL*EVTVLPSLVVTSNDRACPL*SALTCQFCPQFLPIDSHP 379
Query: 516 NSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFS 695
PL FT LT+P+P TLLIRTV+KK P NL PP+ H T YW M+P F AIFS
Sbjct: 378 VFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANLIPPTFAHRTLLYWTFMVPIFHMAIFS 199
Query: 696 NDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTMEVPGRQYLRSSTHLTS*QPPHAA 875
G K W GGL PP+S GRP*FG QK VAVTT++VPG Q SSTHL+S Q PHA
Sbjct: 198 KAVTGNTKCWRGGLHHPPSSPGRP*FGGQKFVAVTTIDVPGWQ*RGSSTHLSSKQAPHA* 19
Query: 876 P 878
P
Sbjct: 18 P 16
>gb|CO172418.1|CO172418 NDL1_29_D02.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_29_D02_A029 5', mRNA sequence
Length = 728
Score = 325 bits (703), Expect = 5e-088
Identities = 118/179 (65%), Positives = 144/179 (80%)
Frame = -1 / -3
Query: 877 GAACGGCYEVKCVEDLKYCLPGTSIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQS 698
G ACG C+E++CVED YC PGTSIVVTATNFC PNYGLP D GG CNPP HF+LP+ +
Sbjct: 720 GQACGACFELRCVEDPLYCHPGTSIVVTATNFCPPNYGLPGDDGGWCNPPRQHFVLPVTA 541
Query: 697 FEKIALWKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTE 518
FEKIA+WK G M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++
Sbjct: 540 FEKIAMWKIGTMNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSK 361
Query: 517 LGWLPMGRNWGQVWHINCDMRGQPLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQFL 341
GWL MGRNWGQ WH+N D RGQ LSFE+++SDGK +TS+NV P DW++G TY GKQF+
Sbjct: 360 TGWLSMGRNWGQNWHVNADYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 184
Score = 225 bits (486), Expect = 4e-058
Identities = 103/181 (56%), Positives = 118/181 (65%)
Frame = +3 / +2
Query: 336 YRRNCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHP 515
++ NCFP+ V P QS G TL V+ LPSL ++SNDR CPL S L C PQ PI SHP
Sbjct: 179 FQTNCFPL*VWPNCQSEGATL*EVTVLPSLVVTSNDRACPL*SALTCQFCPQFLPIDSHP 358
Query: 516 NSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFS 695
PL FT LT+P+P TLLIRTV+KK P NL PP+ H T YW M+P F AIFS
Sbjct: 359 VFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANLIPPTFAHRTLLYWTFMVPIFHMAIFS 538
Query: 696 NDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTMEVPGRQYLRSSTHLTS*QPPHAA 875
G K W GGL PP+S GRP*FG QK VAVTT++VPG Q SSTHL+S Q PHA
Sbjct: 539 KAVTGNTKCWRGGLHHPPSSPGRP*FGGQKFVAVTTIDVPGWQ*RGSSTHLSSKQAPHA* 718
Query: 876 P 878
P
Sbjct: 719 P 721
>gb|DR163745.1|DR163745 RTFE1_44_D12.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_44_D12_A029 5', mRNA sequence
Length = 836
Score = 325 bits (703), Expect = 5e-088
Identities = 118/179 (65%), Positives = 144/179 (80%)
Frame = -1 / +2
Query: 877 GAACGGCYEVKCVEDLKYCLPGTSIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQS 698
G ACG C+E++CVED YC PGTSIVVTATNFC PNYGLP D GG CNPP HF+LP+ +
Sbjct: 5 GQACGACFELRCVEDPLYCHPGTSIVVTATNFCPPNYGLPGDDGGWCNPPRQHFVLPVTA 184
Query: 697 FEKIALWKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTE 518
FEKIA+WK G M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++
Sbjct: 185 FEKIAMWKIGTMNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSK 364
Query: 517 LGWLPMGRNWGQVWHINCDMRGQPLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQFL 341
GWL MGRNWGQ WH+N D RGQ LSFE+++SDGK +TS+NV P DW++G TY GKQF+
Sbjct: 365 TGWLSMGRNWGQNWHVNADYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 541
Score = 225 bits (486), Expect = 4e-058
Identities = 103/181 (56%), Positives = 118/181 (65%)
Frame = +3 / -3
Query: 336 YRRNCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHP 515
++ NCFP+ V P QS G TL V+ LPSL ++SNDR CPL S L C PQ PI SHP
Sbjct: 546 FQTNCFPL*VWPNCQSEGATL*EVTVLPSLVVTSNDRACPL*SALTCQFCPQFLPIDSHP 367
Query: 516 NSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFS 695
PL FT LT+P+P TLLIRTV+KK P NL PP+ H T YW M+P F AIFS
Sbjct: 366 VFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANLIPPTFAHRTLLYWTFMVPIFHMAIFS 187
Query: 696 NDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTMEVPGRQYLRSSTHLTS*QPPHAA 875
G K W GGL PP+S GRP*FG QK VAVTT++VPG Q SSTHL+S Q PHA
Sbjct: 186 KAVTGNTKCWRGGLHHPPSSPGRP*FGGQKFVAVTTIDVPGWQ*RGSSTHLSSKQAPHA* 7
Query: 876 P 878
P
Sbjct: 6 P 4
>gb|CF475910.1|CF475910 RTWW2_15_D07.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_15_D07_A021 5', mRNA sequence
Length = 664
Score = 314 bits (679), Expect = 1e-084
Identities = 114/173 (65%), Positives = 140/173 (80%)
Frame = -1 / +2
Query: 859 CYEVKCVEDLKYCLPGTSIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIAL 680
C+E++CVED YC PGTSIVVTATNFC PNYGLP D GG CNPP HF+LP+ +FEKIA+
Sbjct: 2 CFELRCVEDPLYCHPGTSIVVTATNFCPPNYGLPGDDGGWCNPPRQHFVLPVTAFEKIAM 181
Query: 679 WKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPM 500
WK G M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL M
Sbjct: 182 WKIGTMNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSM 361
Query: 499 GRNWGQVWHINCDMRGQPLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQFL 341
GRNWGQ WH+N D RGQ LSFE+++SDGK +TS+NV P DW++G TY GKQF+
Sbjct: 362 GRNWGQNWHVNADYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 520
Score = 215 bits (465), Expect = 3e-055
Identities = 99/175 (56%), Positives = 114/175 (65%)
Frame = +3 / -2
Query: 336 YRRNCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHP 515
++ NCFP+ V P QS G TL V+ LPSL ++SNDR CPL S L C PQ PI SHP
Sbjct: 525 FQTNCFPL*VWPNCQSEGATL*EVTVLPSLVVTSNDRACPL*SALTCQFCPQFLPIDSHP 346
Query: 516 NSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFS 695
PL FT LT+P+P TLLIRTV+KK P NL PP+ H T YW M+P F AIFS
Sbjct: 345 VFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANLIPPTFAHRTLLYWTFMVPIFHMAIFS 166
Query: 696 NDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTMEVPGRQYLRSSTHLTS*Q 860
G K W GGL PP+S GRP*FG QK VAVTT++VPG Q SSTHL+S Q
Sbjct: 165 KAVTGNTKCWRGGLHHPPSSPGRP*FGGQKFVAVTTIDVPGWQ*RGSSTHLSSKQ 1
>gb|CF400653.1|CF400653 RTWW1_6_A01.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_6_A01_A015 5', mRNA sequence
Length = 559
Score = 312 bits (675), Expect = 4e-084
Identities = 115/184 (62%), Positives = 142/184 (77%)
Frame = -1 / +3
Query: 931 KHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPGTSIVVTATNFCAPNYGLPAD 752
+ GYG+ T LS+ L+ G ACG C+E++CVED YC PGTSIVVTATNFC PNYGLP D
Sbjct: 6 RQGYGVNTAALSSVLYNGGQACGACFELRCVEDPLYCHPGTSIVVTATNFCPPNYGLPGD 185
Query: 751 AGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLI 572
GG CNPP HF+LP+ +FEKIA+WK G M +QYRRV+C + GG+RF++NG+ FF TVLI
Sbjct: 186 DGGWCNPPRQHFVLPVTAFEKIAMWKIGTMNVQYRRVRCAKVGGMRFAINGKDFFLTVLI 365
Query: 571 SNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQPLSFELSSSDGKALTSFNV 392
SNV G G V VK+KG++ GWL MGRNWGQ WH+N D RGQ LSFE+++SD K +TS+N
Sbjct: 366 SNVAGDGAVSGVKVKGSKTGWLSMGRNWGQNWHVNADYRGQALSFEVTTSDRKTVTSYNA 545
Query: 391 VPKD 380
P D
Sbjct: 546 APSD 557
Score = 212 bits (458), Expect = 3e-054
Identities = 101/184 (54%), Positives = 114/184 (61%)
Frame = +3 / -1
Query: 378 QSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTDLTSPA 557
QS G L V+ L SL ++SNDR CPL S L C PQ PI SHP PL FT LT+P+
Sbjct: 559 QSEGAAL*EVTVLRSLVVTSNDRACPL*SALTCQFCPQFLPIDSHPVFEPLTFTPLTAPS 380
Query: 558 PPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGRRK*WLGGL 737
P TLLIRTV+KK P NL PP+ H T YW M+P F AIFS G K W GGL
Sbjct: 379 PATLLIRTVRKKSFPFMANLIPPTFAHRTLLYWTFMVPIFHMAIFSKAVTGNTKCWRGGL 200
Query: 738 QWPPASAGRP*FGAQKLVAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAI 917
PP+S GRP*FG QK VAVTT++VPG Q SSTHL+S Q PHA P +LS V
Sbjct: 199 HHPPSSPGRP*FGGQKFVAVTTIDVPGWQ*RGSSTHLSSKQAPHA*PPL*RTLLSAAVLT 20
Query: 918 PYPC 929
P PC
Sbjct: 19 P*PC 8
>gb|CO361435.1|CO361435 NDL2_4_G08.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_4_G08_A029 5', mRNA sequence
Length = 823
Score = 309 bits (670), Expect = 2e-083
Identities = 116/188 (61%), Positives = 140/188 (74%)
Frame = -1 / +3
Query: 1003 FMASYYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKY 824
F Y +D + GACGFGDL + GYG+ T LS+ L+ G ACG C+E++CVED Y
Sbjct: 258 FATFYSESDALGTMAGACGFGDLYRQGYGVNTAALSSVLYNGGQACGACFELRCVEDPLY 437
Query: 823 CLPGTSIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRR 644
C PGTSIVVTATNFC PNYGLP D GG CNPP HF+LP+ +FEKIA+WK G M +QYRR
Sbjct: 438 CHPGTSIVVTATNFCPPNYGLPGDDGGWCNPPRQHFVLPVTAFEKIAMWKIGTMNVQYRR 617
Query: 643 VKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINC 464
V+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWGQ WH+N
Sbjct: 618 VRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWGQNWHVNA 797
Query: 463 DMRGQPLS 440
D RGQ LS
Sbjct: 798 DYRGQALS 821
Score = 214 bits (461), Expect = 1e-054
Identities = 97/172 (56%), Positives = 108/172 (62%)
Frame = +3 / -1
Query: 438 NDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENL 617
NDR CPL S L C PQ PI SHP PL FT LT+P+P TLLIRTV+KK P NL
Sbjct: 823 NDRACPL*SALTCQFCPQFLPIDSHPVFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANL 644
Query: 618 TPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAV 797
PP+ H T YW M+P F AIFS G K W GGL PP+S GRP*FG QK VAV
Sbjct: 643 IPPTFAHRTLLYWTFMVPIFHMAIFSKAVTGNTKCWRGGLHHPPSSPGRP*FGGQKFVAV 464
Query: 798 TTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
TT++VPG Q SSTHL+S Q PHA P +LS V P PC +SPNPH
Sbjct: 463 TTIDVPGWQ*RGSSTHLSSKQAPHA*PPL*RTLLSAAVLTP*PCLYKSPNPH 308
>gb|DR163481.1|DR163481 RTFE1_43_D12.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_43_D12_A029 3', mRNA sequence
Length = 822
Score = 305 bits (661), Expect = 3e-082
Identities = 112/169 (66%), Positives = 136/169 (80%)
Frame = -1 / +2
Query: 847 KCVEDLKYCLPGTSIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAG 668
+CVED YC PGTSIVVTATNFC PNYGLP D GG CNPP HF+LP+ +FEKIA+WK G
Sbjct: 2 RCVEDPLYCHPGTSIVVTATNFCPPNYGLPGDDGGWCNPPRQHFVLPVTAFEKIAMWKIG 181
Query: 667 IMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNW 488
M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNW
Sbjct: 182 TMNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNW 361
Query: 487 GQVWHINCDMRGQPLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQFL 341
GQ WH+N D RGQ LSFE+++SDGK +TS+NV P DW++G TY GKQF+
Sbjct: 362 GQNWHVNADYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 508
Score = 213 bits (459), Expect = 2e-054
Identities = 97/171 (56%), Positives = 111/171 (64%)
Frame = +3 / -1
Query: 336 YRRNCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHP 515
++ NCFP+ V P QS G TL V+ LPSL ++SNDR CPL S L C PQ PI SHP
Sbjct: 513 FQTNCFPL*VWPNCQSEGATL*EVTVLPSLVVTSNDRACPL*SALTCQFCPQFLPIDSHP 334
Query: 516 NSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFS 695
PL FT LT+P+P TLLIRTV+KK P NL PP+ H T YW M+P F AIFS
Sbjct: 333 VFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANLIPPTFAHRTLLYWTFMVPIFHMAIFS 154
Query: 696 NDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTMEVPGRQYLRSSTHL 848
G K W GGL PP+S GRP*FG QK VAVTT++VPG Q SSTHL
Sbjct: 153 KAVTGNTKCWRGGLHHPPSSPGRP*FGGQKFVAVTTIDVPGWQ*RGSSTHL 1
>gb|DR163147.1|DR163147 RTFE1_41_E12.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_41_E12_A029 3', mRNA sequence
Length = 814
Score = 304 bits (659), Expect = 6e-082
Identities = 112/168 (66%), Positives = 135/168 (80%)
Frame = -1 / +1
Query: 844 CVEDLKYCLPGTSIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGI 665
CVED YC PGTSIVVTATNFC PNYGLP D GG CNPP HF+LP+ +FEKIA+WK G
Sbjct: 1 CVEDPLYCHPGTSIVVTATNFCPPNYGLPGDDGGWCNPPRQHFVLPVTAFEKIAMWKIGT 180
Query: 664 MPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWG 485
M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWG
Sbjct: 181 MNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWG 360
Query: 484 QVWHINCDMRGQPLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQFL 341
Q WH+N D RGQ LSFE+++SDGK +TS+NV P DW++G TY GKQF+
Sbjct: 361 QNWHVNADYRGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 504
Score = 207 bits (447), Expect = 1e-052
Identities = 95/169 (56%), Positives = 109/169 (64%)
Frame = +3 / -3
Query: 336 YRRNCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHP 515
++ NCFP+ V P QS G TL V+ LPSL ++SNDR CPL S L C PQ PI SHP
Sbjct: 509 FQTNCFPL*VWPNCQSEGATL*EVTVLPSLVVTSNDRACPL*SALTCQFCPQFLPIDSHP 330
Query: 516 NSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFS 695
PL FT LT+P+P TLLIRTV+KK P NL PP+ H T YW M+P F AIFS
Sbjct: 329 VFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANLIPPTFAHRTLLYWTFMVPIFHMAIFS 150
Query: 696 NDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTMEVPGRQYLRSST 842
G K W GGL PP+S GRP*FG QK VAVTT++VPG Q SST
Sbjct: 149 KAVTGNTKCWRGGLHHPPSSPGRP*FGGQKFVAVTTIDVPGWQ*RGSST 3
>gb|BG039378.1|BG039378 NXSI_098_D11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_098_D11 5' similar to Arabidopsis thaliana
sequence At3g03220 putative expansin precursor see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 544
Score = 301 bits (652), Expect = 6e-081
Identities = 111/180 (61%), Positives = 135/180 (75%)
Frame = -1 / +3
Query: 889 LFERGAACGGCYEVKCVEDLKYCLPGTSIVVTATNFCAPNYGLPADAGGHCNPPNHHFLL 710
L+ G ACG C+E++CVED YC PGTSIVVTATNFC PNYGLP D GG CNPP HF+L
Sbjct: 3 LYNGGQACGACFELRCVEDPLYCHPGTSIVVTATNFCPPNYGLPGDDGGWCNPPRQHFVL 182
Query: 709 PIQSFEKIALWKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKI 530
P+ +FEKIA+WK G M +QYRRV+C + G+ ++NG+ FF TVLISNV G G V VK
Sbjct: 183 PVTAFEKIAMWKIGTMNVQYRRVRCAKXXGMXXAINGKDFFLTVLISNVAGDGAVSGVKX 362
Query: 529 KGTELGWLPMGRNWGQVWHINCDMRGQPLSFELSSSDGKALTSFNVVPKDWEYGKTYTGK 350
++ GWL MGRNWGQ WH+N D RGQ LSF ++SDGK +TS+NV P DW++G TY GK
Sbjct: 363 XXSKTGWLSMGRNWGQNWHVNADYRGQALSFXXTTSDGKTVTSYNVAPSDWQFGHTYKGK 542
Score = 206 bits (445), Expect = 2e-052
Identities = 98/177 (55%), Positives = 109/177 (61%)
Frame = +3 / -1
Query: 348 CFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVP 527
CFP+ V P QS G TL V+ LPSL + SNDR CPL S L C PQ PI SHP
Sbjct: 544 CFPL*VWPNCQSEGATL*EVTVLPSLVVXSNDRACPL*SALTCQFCPQFLPIDSHPVFEX 365
Query: 528 LIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWM 707
FT LT+P+P TLLIRTV+KK P L P H T YW M+P F AIFS
Sbjct: 364 XXFTPLTAPSPATLLIRTVRKKSFPFMAXLIPXXFAHRTLLYWTFMVPIFHMAIFSKAVT 185
Query: 708 GRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTMEVPGRQYLRSSTHLTS*QPPHAAP 878
G K W GGL PP+S GRP*FG QK VAVTT++VPG Q SSTHL+S Q PHA P
Sbjct: 184 GNTKCWRGGLHHPPSSPGRP*FGGQKFVAVTTIDVPGWQ*RGSSTHLSSKQAPHA*P 14
>gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA338 5' end, mRNA sequence
Length = 817
Score = 231 bits (499), Expect(2) = 3e-080
Identities = 88/154 (57%), Positives = 115/154 (74%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
SIVVTATNFC PN LP D GG CNPP HF L F+ IA ++AGI+P+QYRRV C R
Sbjct: 287 SIVVTATNFCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQR 466
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF++NG +F VLI+NVGGAGDV +V +KG + GW PM RNWGQ W N + GQ
Sbjct: 467 KGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQ 646
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQ 347
LSF++++SDGK +TS+NV +W++G+T+ G+Q
Sbjct: 647 SLSFKVTTSDGKTVTSYNVASSNWQFGQTFAGEQ 748
Score = 117 bits (250), Expect(2) = 3e-032
Identities = 67/154 (43%), Positives = 77/154 (50%)
Frame = +3 / -2
Query: 348 CFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVP 527
C P V P Q L TL V+ PSL ++ +R CP L+C WPQ R IG P P
Sbjct: 747 CSPAKVWPNCQLLEATL*EVTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAP 568
Query: 528 LIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWM 707
L T TSPAPPTL++RT K PL PP T Y G +PA A+
Sbjct: 567 LTETASTSPAPPTLVMRTRLKYE*PLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGS 388
Query: 708 GRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTME 809
R K GGL PP S G G QKLVAVTT+E
Sbjct: 387 ERSKCSRGGLHQPPLSLGSALLGGQKLVAVTTIE 286
Score = 88.6 bits (187), Expect(2) = 3e-080
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = -1 / +2
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D +CLPG
Sbjct: 107 YGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAWCLPG 286
Query: 811 TSIV 800
+ +V
Sbjct: 287 SIVV 298
Score = 42.3 bits (86), Expect(2) = 3e-032
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = +3 / -2
Query: 813 PGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNP 950
PGR + SS H S*Q P P N AVL V +P P R P P
Sbjct: 285 PGRHHAGSSLHWIS*QAPQLKPLLNKAVLRAAVLVP*PWLYRLP*P 148
>gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAK45 5' end, mRNA sequence
Length = 778
Score = 231 bits (499), Expect(2) = 3e-080
Identities = 88/154 (57%), Positives = 115/154 (74%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
SIVVTATNFC PN LP D GG CNPP HF L F+ IA ++AGI+P+QYRRV C R
Sbjct: 287 SIVVTATNFCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQR 466
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF++NG +F VLI+NVGGAGDV +V +KG + GW PM RNWGQ W N + GQ
Sbjct: 467 KGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQ 646
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQ 347
LSF++++SDGK +TS+NV +W++G+T+ G+Q
Sbjct: 647 SLSFKVTTSDGKTVTSYNVASSNWQFGQTFAGEQ 748
Score = 117 bits (250), Expect(2) = 3e-032
Identities = 67/154 (43%), Positives = 77/154 (50%)
Frame = +3 / -2
Query: 348 CFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVP 527
C P V P Q L TL V+ PSL ++ +R CP L+C WPQ R IG P P
Sbjct: 747 CSPAKVWPNCQLLEATL*EVTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAP 568
Query: 528 LIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWM 707
L T TSPAPPTL++RT K PL PP T Y G +PA A+
Sbjct: 567 LTETASTSPAPPTLVMRTRLKYE*PLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGS 388
Query: 708 GRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTME 809
R K GGL PP S G G QKLVAVTT+E
Sbjct: 387 ERSKCSRGGLHQPPLSLGSALLGGQKLVAVTTIE 286
Score = 88.6 bits (187), Expect(2) = 3e-080
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = -1 / +2
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D +CLPG
Sbjct: 107 YGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAWCLPG 286
Query: 811 TSIV 800
+ +V
Sbjct: 287 SIVV 298
Score = 42.3 bits (86), Expect(2) = 3e-032
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = +3 / -2
Query: 813 PGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNP 950
PGR + SS H S*Q P P N AVL V +P P R P P
Sbjct: 285 PGRHHAGSSLHWIS*QAPQLKPLLNKAVLRAAVLVP*PWLYRLP*P 148
>gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADO50 3' end, mRNA sequence
Length = 902
Score = 229 bits (494), Expect(2) = 8e-080
Identities = 87/154 (56%), Positives = 114/154 (74%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
SIVVTATNFC PN LP D GG CNPP HF L F+ IA ++AGI+P+QYRRV C R
Sbjct: 344 SIVVTATNFCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQR 523
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF++NG +F VLI+NVGGAGDV +V +KG + GW PM RNWGQ W N + GQ
Sbjct: 524 KGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQ 703
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQ 347
LSF++++SDGK +TS+NV +W++G+T+ G +
Sbjct: 704 SLSFKVTTSDGKTVTSYNVASSNWQFGQTFAGNR 805
Score = 116 bits (249), Expect(2) = 4e-032
Identities = 67/153 (43%), Positives = 77/153 (50%)
Frame = +3 / -3
Query: 351 FPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPL 530
FP V P Q L TL V+ PSL ++ +R CP L+C WPQ R IG P PL
Sbjct: 801 FPAKVWPNCQLLEATL*EVTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPL 622
Query: 531 IFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMG 710
T TSPAPPTL++RT K PL PP T Y G +PA A+
Sbjct: 621 TETASTSPAPPTLVMRTRLKYE*PLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSE 442
Query: 711 RRK*WLGGLQWPPASAGRP*FGAQKLVAVTTME 809
R K GGL PP S G G QKLVAVTT+E
Sbjct: 441 RSKCSRGGLHQPPLSLGSALLGGQKLVAVTTIE 343
Score = 89.5 bits (189), Expect(2) = 8e-080
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = -1 / +2
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D ++CLPG
Sbjct: 164 YGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPQWCLPG 343
Query: 811 TSIV 800
+ +V
Sbjct: 344 SIVV 355
Score = 42.3 bits (86), Expect(2) = 4e-032
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = +3 / -3
Query: 813 PGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNP 950
PGR + SS H S*Q P P N AVL V +P P R P P
Sbjct: 342 PGRHHCGSSLHWIS*QAPQLKPLLNKAVLRAAVLVP*PWLYRLP*P 205
>gb|DT639052.1|DT639052 EST1153983 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHM49 3' end, mRNA sequence
Length = 814
Score = 297 bits (642), Expect = 1e-079
Identities = 110/179 (61%), Positives = 134/179 (74%)
Frame = -1 / +3
Query: 1003 FMASYYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKY 824
F Y +D + GACGFGDL + GYG+ T LS+ L+ G ACG C+E++CVED Y
Sbjct: 273 FATFYSESDALGTMAGACGFGDLYRQGYGVNTAALSSVLYNGGQACGACFELRCVEDPLY 452
Query: 823 CLPGTSIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRR 644
C PGTSIVVTATNFC PNYGLP D GG CNPP HF+LP+ +FEKIA+WK G M +QYRR
Sbjct: 453 CHPGTSIVVTATNFCPPNYGLPGDDGGWCNPPRQHFVLPVTAFEKIAMWKIGTMNVQYRR 632
Query: 643 VKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHIN 467
V+C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWGQ WH+N
Sbjct: 633 VRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWGQNWHVN 809
Score = 199 bits (428), Expect = 4e-050
Identities = 91/164 (55%), Positives = 102/164 (62%)
Frame = +3 / -1
Query: 462 SQLMCHTWPQLRPIGSHPNSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHL 641
S L C PQ PI SHP PL FT LT+P+P TLLIRTV+KK P NL PP+ H
Sbjct: 814 SALTCQFCPQFLPIDSHPVFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANLIPPTFAHR 635
Query: 642 TRRYWIGMMPAFQSAIFSNDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTMEVPGR 821
T YW M+P F AIFS G K W GGL PP+S GRP*FG QK VAVTT++VPG
Sbjct: 634 TLLYWTFMVPIFHMAIFSKAVTGNTKCWRGGLHHPPSSPGRP*FGGQKFVAVTTIDVPGW 455
Query: 822 QYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
Q SSTHL+S Q PHA P +LS V P PC +SPNPH
Sbjct: 454 Q*RGSSTHLSSKQAPHA*PPL*RTLLSAAVLTP*PCLYKSPNPH 323
>gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_C05_A022 5', mRNA
sequence
Length = 765
Score = 228 bits (493), Expect(2) = 2e-079
Identities = 87/152 (57%), Positives = 113/152 (74%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
SIVVTATNFC PN LP D GG CNPP HF L F+ IA ++AGI+P+QYRRV C R
Sbjct: 308 SIVVTATNFCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQR 487
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF++NG +F VLI+NVGGAGDV +V +KG + GW PM RNWGQ W N + GQ
Sbjct: 488 KGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQ 667
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTG 353
LSF++++SDGK +TS+NV +W++G+T+ G
Sbjct: 668 SLSFKVTTSDGKTVTSYNVASSNWQFGQTFAG 763
Score = 114 bits (243), Expect(2) = 2e-031
Identities = 66/152 (43%), Positives = 76/152 (50%)
Frame = +3 / -1
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q L TL V+ PSL ++ +R CP L+C WPQ R IG P PL
Sbjct: 762 PAKVWPNCQLLEATL*EVTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPLT 583
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGR 713
T TSPAPPTL++RT K PL PP T Y G +PA A+ R
Sbjct: 582 ETASTSPAPPTLVMRTRLKYE*PLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSER 403
Query: 714 RK*WLGGLQWPPASAGRP*FGAQKLVAVTTME 809
K GGL PP S G G QKLVAVTT+E
Sbjct: 402 SKCSRGGLHQPPLSLGSALLGGQKLVAVTTIE 307
Score = 88.6 bits (187), Expect(2) = 2e-079
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = -1 / +2
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D +CLPG
Sbjct: 128 YGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAWCLPG 307
Query: 811 TSIV 800
+ +V
Sbjct: 308 SIVV 319
Score = 42.3 bits (86), Expect(2) = 2e-031
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = +3 / -1
Query: 813 PGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNP 950
PGR + SS H S*Q P P N AVL V +P P R P P
Sbjct: 306 PGRHHAGSSLHWIS*QAPQLKPLLNKAVLRAAVLVP*PWLYRLP*P 169
>gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_42_B01_A029 5', mRNA sequence
Length = 862
Score = 226 bits (489), Expect(2) = 2e-078
Identities = 86/154 (55%), Positives = 113/154 (73%)
Frame = -1 / +1
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
+IVVTATNFC PN LP +AGG CNPP HF L F+ IA ++AGI+P+ Y+RV C R
Sbjct: 352 AIVVTATNFCPPNNALPNNAGGWCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHR 531
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNWGQ W N + GQ
Sbjct: 532 SGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQ 711
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQ 347
LSF++++SDG+ +TS+N P +W++G+T+ G Q
Sbjct: 712 SLSFKVTTSDGRTVTSYNAAPSNWQFGQTFAGAQ 813
Score = 146 bits (313), Expect(2) = 2e-042
Identities = 76/164 (46%), Positives = 87/164 (53%)
Frame = +3 / -3
Query: 315 DLVALILYRRNCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQL 494
D +L +R C P V P Q LG L V+ LPSL ++ +R CPL L+C WPQL
Sbjct: 845 DFFVFLLCQRICAPAKVWPNCQLLGAAL*EVTVLPSLVVTLKERLCPLR*LLLCQFWPQL 666
Query: 495 RPIGSHPNSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPA 674
R IG HP P + T TSPAPPTL++RT K P T N PP T Y G MPA
Sbjct: 665 RDIGCHPVLEPFMETAWTSPAPPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPA 486
Query: 675 FQSAIFSNDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTM 806
AI R K W GGL PPA G G QKLVAVTT+
Sbjct: 485 LNLAICWKTGSERSKCWRGGLHQPPALLGSALLGGQKLVAVTTI 354
Score = 87.2 bits (184), Expect(2) = 2e-078
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = -1 / +1
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y D +GGACG+G+L GYG +T LSTALF G +CG C+ ++C +D ++CLPG
Sbjct: 172 YGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQWCLPG 351
Query: 811 TSIV 800
+V
Sbjct: 352 AIVV 363
Score = 47.3 bits (97), Expect(2) = 2e-042
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +3 / -3
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
+ T PGR + SS H + Q P P SAVL V +PYP R P PH
Sbjct: 374 LVAVTTIAPGRHHCGSSLHRIAKQAPQLRPLLKSAVLRAAVLVPYPWLYRLP*PH 210
>gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds
Length = 998
Score = 222 bits (480), Expect(2) = 7e-078
Identities = 85/154 (55%), Positives = 111/154 (72%)
Frame = -1 / +3
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATNFC PN LP D GG CNPP HF + +F KIA ++ GI+PI Y RV CLR
Sbjct: 384 TVTVTATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLR 563
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNWGQ W N + GQ
Sbjct: 564 KGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRSGWQPMSRNWGQNWQSNSYLNGQ 743
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQ 347
LSF++++SDG+ + S NV P +W++G+T+ G Q
Sbjct: 744 SLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 845
Score = 111 bits (237), Expect(2) = 6e-031
Identities = 63/149 (42%), Positives = 76/149 (51%)
Frame = +3 / -2
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G TL + PSL ++ N+R CPL +L+C PQLR +G P P +
Sbjct: 838 PSKVWPNCQFEGATLFETTVRPSLVVTWNERLCPLRYELLCQFCPQLRDMGCQPLLDPFM 659
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGR 713
T TSPAPPTL++ T K P T PP + T +G +P AIF
Sbjct: 658 ETAWTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAGSAI 479
Query: 714 RK*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K GGL PP S GR FG QKLVAVT
Sbjct: 478 SKCCSGGLHHPPLSLGRALFGGQKLVAVT 392
Score = 89.5 bits (189), Expect(2) = 7e-078
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = -1 / +3
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y +D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D ++CLPG
Sbjct: 204 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMRCNDDPQWCLPG 383
Query: 811 TSIV 800
T V
Sbjct: 384 TVTV 395
Score = 43.7 bits (89), Expect(2) = 6e-031
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +3 / -2
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNP 950
+ T+ VPG+ + SS H S*Q P +P AVL V +P P R P P
Sbjct: 406 LVAVTVTVPGKHHWGSSLHRIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYP 245
>gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds
Length = 919
Score = 222 bits (480), Expect(2) = 7e-078
Identities = 85/154 (55%), Positives = 111/154 (72%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATNFC PN LP D GG CNPP HF + +F KIA ++ GI+PI Y RV CLR
Sbjct: 233 TVTVTATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLR 412
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNWGQ W N + GQ
Sbjct: 413 KGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRSGWQPMSRNWGQNWQSNSYLNGQ 592
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQ 347
LSF++++SDG+ + S NV P +W++G+T+ G Q
Sbjct: 593 SLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
Score = 111 bits (237), Expect(2) = 6e-031
Identities = 63/149 (42%), Positives = 76/149 (51%)
Frame = +3 / -2
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G TL + PSL ++ N+R CPL +L+C PQLR +G P P +
Sbjct: 687 PSKVWPNCQFEGATLFETTVRPSLVVTWNERLCPLRYELLCQFCPQLRDMGCQPLLDPFM 508
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGR 713
T TSPAPPTL++ T K P T PP + T +G +P AIF
Sbjct: 507 ETAWTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAGSAI 328
Query: 714 RK*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K GGL PP S GR FG QKLVAVT
Sbjct: 327 SKCCSGGLHHPPLSLGRALFGGQKLVAVT 241
Score = 89.5 bits (189), Expect(2) = 7e-078
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = -1 / +2
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y +D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D ++CLPG
Sbjct: 53 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMRCNDDPQWCLPG 232
Query: 811 TSIV 800
T V
Sbjct: 233 TVTV 244
Score = 43.7 bits (89), Expect(2) = 6e-031
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +3 / -2
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNP 950
+ T+ VPG+ + SS H S*Q P +P AVL V +P P R P P
Sbjct: 255 LVAVTVTVPGKHHWGSSLHRIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYP 94
>gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 222 bits (479), Expect(2) = 9e-078
Identities = 85/154 (55%), Positives = 111/154 (72%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATNFC PN LP D GG CNPP HF + +F KIA ++ GI+PI Y RV CLR
Sbjct: 233 TVTVTATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLR 412
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNWGQ W N + GQ
Sbjct: 413 KGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSMSGWQPMSRNWGQNWQSNSYLNGQ 592
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQ 347
LSF++++SDG+ + S NV P +W++G+T+ G Q
Sbjct: 593 SLSFQVTTSDGRTIVSNNVAPSNWQFGQTFEGSQ 694
Score = 110 bits (234), Expect(2) = 2e-030
Identities = 63/149 (42%), Positives = 75/149 (50%)
Frame = +3 / -3
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G TL PSL ++ N+R CPL +L+C PQLR +G P P +
Sbjct: 687 PSKVWPNCQFEGATLFETIVRPSLVVTWNERLCPLRYELLCQFCPQLRDMGCQPLIDPFM 508
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGR 713
T TSPAPPTL++ T K P T PP + T +G +P AIF
Sbjct: 507 ETAWTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAGSAI 328
Query: 714 RK*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K GGL PP S GR FG QKLVAVT
Sbjct: 327 SKCCSGGLHHPPLSLGRALFGGQKLVAVT 241
Score = 89.5 bits (189), Expect(2) = 9e-078
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = -1 / +2
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y +D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D ++CLPG
Sbjct: 53 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMRCNDDPQWCLPG 232
Query: 811 TSIV 800
T V
Sbjct: 233 TVTV 244
Score = 43.7 bits (89), Expect(2) = 2e-030
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +3 / -3
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNP 950
+ T+ VPG+ + SS H S*Q P +P AVL V +P P R P P
Sbjct: 255 LVAVTVTVPGKHHWGSSLHRIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYP 94
>gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds
Length = 891
Score = 222 bits (480), Expect(2) = 9e-078
Identities = 85/154 (55%), Positives = 111/154 (72%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATNFC PN LP D GG CNPP HF + +F KIA ++ GI+PI Y RV CLR
Sbjct: 233 TVTVTATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLR 412
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNWGQ W N + GQ
Sbjct: 413 KGGIRFTVNGHSYFNLVLITNVGGAGDVNAVSIKGSRSGWQPMSRNWGQNWQSNSYLNGQ 592
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQ 347
LSF++++SDG+ + S NV P +W++G+T+ G Q
Sbjct: 593 SLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
Score = 113 bits (241), Expect(2) = 1e-031
Identities = 64/149 (42%), Positives = 77/149 (51%)
Frame = +3 / -1
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G TL + PSL ++ N+R CPL +L+C PQLR +G P P +
Sbjct: 687 PSNVWPNCQFEGATLFETTVRPSLVVTWNERLCPLR*ELLCQFCPQLRDMGCQPLLDPFM 508
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGR 713
T LTSPAPPTL++ T K P T PP + T +G +P AIF
Sbjct: 507 ETALTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAGSAI 328
Query: 714 RK*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K GGL PP S GR FG QKLVAVT
Sbjct: 327 SKCCSGGLHHPPLSLGRALFGGQKLVAVT 241
Score = 89.0 bits (188), Expect(2) = 9e-078
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = -1 / +2
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y +D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D ++CLPG
Sbjct: 53 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMQCNDDPQWCLPG 232
Query: 811 TSIV 800
T V
Sbjct: 233 TVTV 244
Score = 44.1 bits (90), Expect(2) = 1e-031
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +3 / -1
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNP 950
+ T+ VPG+ + SS H S*Q P +P AVL V +P P R P P
Sbjct: 255 LVAVTVTVPGKHHWGSSLHCIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYP 94
>gb|DT632413.1|DT632413 EST1147344 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFJ73 3' end, mRNA sequence
Length = 826
Score = 219 bits (472), Expect(2) = 2e-077
Identities = 83/149 (55%), Positives = 110/149 (73%)
Frame = -1 / +3
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
S+ VTATNFC PN LP + GG CNPP HF + +FEKIA +K+GI+PI YRRV CLR
Sbjct: 378 SVTVTATNFCPPNNALPNNNGGWCNPPLRHFDMAEPAFEKIAKYKSGIVPILYRRVLCLR 557
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF++NG +F VLISNVGGAG V++V IKG+ W PM RNWGQ W N + GQ
Sbjct: 558 KGGIRFTINGLPYFNLVLISNVGGAGGVQAVSIKGSNTSWQPMSRNWGQNWQSNSFLNGQ 737
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKT 362
LSF++++SDG+ + S+N P +W++G+T
Sbjct: 738 SLSFKVTTSDGRTIVSYNAAPSNWQFGQT 824
Score = 101 bits (215), Expect(2) = 2e-029
Identities = 60/146 (41%), Positives = 68/146 (46%)
Frame = +3 / -1
Query: 363 VLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTD 542
V P Q G L PSL ++ DR CP +L+C PQLR IG P I T
Sbjct: 823 VWPNCQLEGAALYETIVRPSLVVTLKDRLCPFKKELLCQFCPQLRDIGCQLVFDPFIETA 644
Query: 543 LTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGRRK* 722
T PAPPTL + T K RPL PP + T +G +P AIFS K
Sbjct: 643 WTPPAPPTLEMSTRLKYGRPLMVKRIPPFLKQRTLL*RMGTIPLLYLAIFSKAGSAMSKC 464
Query: 723 WLGGLQWPPASAGRP*FGAQKLVAVT 800
GGL PP GR G QKLVAVT
Sbjct: 463 RRGGLHHPPLLLGRALLGGQKLVAVT 386
Score = 91.8 bits (194), Expect(2) = 2e-077
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = -1 / +3
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y D +GGACG+G+L GYG T LSTALF G +CG CYE+KC++D ++CLPG
Sbjct: 198 YGGIDASGTMGGACGYGNLYSQGYGTDTAALSTALFNNGLSCGACYEMKCIDDPEWCLPG 377
Query: 811 TSIV 800
+ V
Sbjct: 378 SVTV 389
Score = 48.7 bits (100), Expect(2) = 2e-029
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3 / -1
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
+ T+ +PG+ + SS H S* P +P N AVL V++P P R P PH
Sbjct: 400 LVAVTVTLPGKHHSGSSIHFIS*HAPQLSPLLNKAVLRAAVSVP*PWLYRFPYPH 236
>gb|CO361349.1|CO361349 NDL2_4_G08.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_4_G08_A029 3', mRNA sequence
Length = 819
Score = 289 bits (626), Expect = 2e-077
Identities = 106/158 (67%), Positives = 128/158 (81%)
Frame = -1 / +2
Query: 817 PGTSIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVK 638
PGTSIVVTATNFC PNYGLP D GG CNPP HF+LP+ +FEKIA+WK G M +QYRRV+
Sbjct: 2 PGTSIVVTATNFCPPNYGLPGDDGGWCNPPRQHFVLPVTAFEKIAMWKIGTMNVQYRRVR 181
Query: 637 CLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDM 458
C + GG+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWGQ WH+N D
Sbjct: 182 CAKVGGMRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWGQNWHVNADY 361
Query: 457 RGQPLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQF 344
RGQ LSFE+++SDGK +TS+NV P DW++G TY GKQF
Sbjct: 362 RGQALSFEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQF 475
Score = 203 bits (437), Expect = 3e-051
Identities = 91/158 (57%), Positives = 103/158 (65%)
Frame = +3 / -1
Query: 345 NCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSV 524
NCFP+ V P QS G TL V+ LPSL ++SNDR CPL S L C PQ PI SHP
Sbjct: 474 NCFPL*VWPNCQSEGATL*EVTVLPSLVVTSNDRACPL*SALTCQFCPQFLPIDSHPVFE 295
Query: 525 PLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDW 704
PL FT LT+P+P TLLIRTV+KK P NL PP+ H T YW M+P F AIFS
Sbjct: 294 PLTFTPLTAPSPATLLIRTVRKKSFPFMANLIPPTFAHRTLLYWTFMVPIFHMAIFSKAV 115
Query: 705 MGRRK*WLGGLQWPPASAGRP*FGAQKLVAVTTMEVPG 818
G K W GGL PP+S GRP*FG QK VAVTT++VPG
Sbjct: 114 TGNTKCWRGGLHHPPSSPGRP*FGGQKFVAVTTIDVPG 1
>gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 219 bits (472), Expect(2) = 2e-076
Identities = 84/154 (54%), Positives = 109/154 (70%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ +TATNFC PN LP D GG CNPP HF + +F KIA ++ GI+PI Y RV CLR
Sbjct: 233 TVTITATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLR 412
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF+VNG F VLI+NVGGAGDV +V IKG GW PM RNWGQ W N + GQ
Sbjct: 413 KGGIRFTVNGHSCFNLVLITNVGGAGDVHAVSIKGPRSGWQPMSRNWGQNWQSNSYLNGQ 592
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQ 347
LSF++++SDG+ + S NV P +W++G+T+ G Q
Sbjct: 593 SLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEGSQ 694
Score = 108 bits (231), Expect(2) = 2e-029
Identities = 62/148 (41%), Positives = 75/148 (50%)
Frame = +3 / -3
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G TL + PSL ++ N+R CPL +L+C PQLR +G P P +
Sbjct: 687 PSKVWPNCQFEGATLFETTVRPSLVVTWNERLCPLRYELLCQFCPQLRDMGCQPLLGPFM 508
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGR 713
T TSPAPPTL++ T K P T PP + T +G +P AIF
Sbjct: 507 ETA*TSPAPPTLVMSTRLKHEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAGSAI 328
Query: 714 RK*WLGGLQWPPASAGRP*FGAQKLVAV 797
K GGL PP S GR FG QKLVAV
Sbjct: 327 SKCCSGGLHHPPLSLGRALFGGQKLVAV 244
Score = 88.6 bits (187), Expect(2) = 2e-076
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = -1 / +2
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y +D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D ++CLPG
Sbjct: 53 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGACYEMQCNDDPQWCLPG 232
Query: 811 T 809
T
Sbjct: 233 T 235
Score = 41.4 bits (84), Expect(2) = 2e-029
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +3 / -3
Query: 810 VPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNP 950
VPG+ + SS H S*Q P +P AVL V +P P R P P
Sbjct: 234 VPGKHHWGSSLHCIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYP 94
>gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_31_H02_A029 5', mRNA sequence
Length = 857
Score = 231 bits (498), Expect(2) = 2e-076
Identities = 85/155 (54%), Positives = 116/155 (74%)
Frame = -1 / +1
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PN LP D GG CNPP HF + +F+KIA++++GI+PI +RR+ C+R
Sbjct: 376 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVR 555
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
EGGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNWGQ W N + GQ
Sbjct: 556 EGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNWQSNSYLNGQ 735
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQF 344
LSF++S+SDG+ +TS+NV P +W++G+T+ G QF
Sbjct: 736 TLSFQVSTSDGRIITSYNVAPANWQFGQTFEGVQF 840
Score = 124 bits (266), Expect(2) = 3e-033
Identities = 69/149 (46%), Positives = 77/149 (51%)
Frame = +3 / -1
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G TL V LPSL L+ +R CP +L+C PQLR I P PL+
Sbjct: 830 PSNVWPNCQFAGATL*EVMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLEPLM 651
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGR 713
T TSPAPPTL++ T K PL N TPPS H IG MP AIF
Sbjct: 650 ETASTSPAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*KAGCAM 471
Query: 714 RK*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K W GGL PP S GR G Q+LVAVT
Sbjct: 470 SKCWRGGLHHPPLSLGRAELGGQRLVAVT 384
Score = 76.7 bits (161), Expect(2) = 2e-076
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = -1 / +1
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GGACG+G+L GYG T LSTALF GA CG CYE+KC
Sbjct: 190 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKC 339
Score = 38.2 bits (77), Expect(2) = 3e-033
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3 / -1
Query: 837 STHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
S H S*Q P AP SAVL V +P P + P PH
Sbjct: 344 SLHFIS*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPH 228
>gb|CX650703.1|CX650703 COLD1_47_B12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_47_B12_A029 5', mRNA sequence
Length = 629
Score = 220 bits (475), Expect(2) = 2e-076
Identities = 83/154 (53%), Positives = 109/154 (70%)
Frame = -1 / +3
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATNFC PN LP D GG CNPP HF + +F++IA +K GI+PI YRRV C+R
Sbjct: 162 TVTVTATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFQQIAKYKGGIVPILYRRVPCVR 341
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF+VNG +F VLI+NVGG GDV +V IKG+ GW PM RNWGQ W N + Q
Sbjct: 342 KGGIRFTVNGHSYFNLVLITNVGGPGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNEQ 521
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQ 347
LSF++++SDGK S+N P W++G+T+ G Q
Sbjct: 522 SLSFQVTTSDGKTFVSYNAAPSSWQFGQTFEGCQ 623
Score = 87.2 bits (184), Expect(2) = 2e-076
Identities = 31/55 (56%), Positives = 40/55 (72%)
Frame = -1 / +3
Query: 964 IGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPGTSIV 800
+GGACG+G+L GYG T LSTALF G +CG CYE++C +D ++CLPGT V
Sbjct: 9 MGGACGYGNLNSQGYGTNTAALSTALFNDGLSCGACYEMQCNDDAQWCLPGTVTV 173
Score = 71.6 bits (150), Expect(3) = 9e-028
Identities = 42/112 (37%), Positives = 53/112 (47%)
Frame = +3 / -2
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G L + LPSL ++ N+R C L +L+C PQLR +G P P +
Sbjct: 616 PSNVWPNCQLEGAALYETNVLPSLVVTWNERLCSLR*ELLCQFCPQLRDMGCQPVLDPFM 437
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAI 689
T TSP PPT ++ T K P T PP T IG +P AI
Sbjct: 436 ETAWTSPGPPTFVMSTRLKYEWPFTVKRIPPFLTQGTLL*RIGTIPPLYFAI 281
Score = 51.5 bits (106), Expect(3) = 9e-028
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +3 / -2
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
+ T+ VPG+ + SS H S*Q P +P SAVL V +P P R P PH
Sbjct: 184 LVAVTVTVPGKHHWASSLHCIS*QAPQLSPSLKSAVLKAAVLVP*PWLLRLPYPH 20
Score = 39.1 bits (79), Expect(3) = 9e-028
Identities = 17/24 (70%), Positives = 17/24 (70%)
Frame = +3 / -2
Query: 729 GGLQWPPASAGRP*FGAQKLVAVT 800
GGL PP S GR FG QKLVAVT
Sbjct: 241 GGLHHPPLSLGRALFGGQKLVAVT 170
>gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_G09_A033 5', mRNA sequence
Length = 853
Score = 232 bits (500), Expect(2) = 2e-076
Identities = 84/155 (54%), Positives = 117/155 (75%)
Frame = -1 / +1
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PNY LP D GG CNPP HF + +F+++A++++GI+PI +RRV C+R
Sbjct: 337 TVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVR 516
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW PM RNWGQ W N + GQ
Sbjct: 517 KGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNWQSNSYLNGQ 696
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQF 344
LSF++S+SDG+ +TS+N P +W++G+T+ G QF
Sbjct: 697 SLSFQVSTSDGRTITSYNAAPANWQFGQTFEGLQF 801
Score = 95.9 bits (203), Expect(3) = 1e-029
Identities = 51/109 (46%), Positives = 58/109 (53%)
Frame = +3 / -3
Query: 345 NCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSV 524
NC P V P Q G L V LPSL L+ +R CP +L+C PQLR IG P
Sbjct: 800 NCSPSNVWPNCQFAGAAL*EVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLE 621
Query: 525 PLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMP 671
PL+ T TSPAPPTL++ T K PL N TPP H T IG MP
Sbjct: 620 PLMETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMP 474
Score = 75.3 bits (158), Expect(2) = 2e-076
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1 / +1
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GGACG+G+L GYG T LSTALF GA CG CY++KC
Sbjct: 151 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 300
Score = 37.7 bits (76), Expect(3) = 1e-029
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3 / -3
Query: 717 K*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K W GGL PP S GR * G + VAVT
Sbjct: 428 KCWRGGLHHPPLSLGRA*LGGHRFVAVT 345
Score = 35.0 bits (70), Expect(3) = 1e-029
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3 / -3
Query: 837 STHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
S H *Q P AP SAVL V +P P + P PH
Sbjct: 305 SLHFIW*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPH 189
>gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_F09_A034 3', mRNA sequence
Length = 848
Score = 232 bits (500), Expect(2) = 2e-076
Identities = 84/155 (54%), Positives = 117/155 (75%)
Frame = -1 / -3
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PNY LP D GG CNPP HF + +F+++A++++GI+PI +RRV C+R
Sbjct: 495 TVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVR 316
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW PM RNWGQ W N + GQ
Sbjct: 315 KGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNWQSNSYLNGQ 136
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQF 344
LSF++S+SDG+ +TS+N P +W++G+T+ G QF
Sbjct: 135 SLSFQVSTSDGRTITSYNAAPANWQFGQTFEGLQF 31
Score = 95.9 bits (203), Expect(3) = 1e-029
Identities = 51/109 (46%), Positives = 58/109 (53%)
Frame = +3 / +2
Query: 345 NCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSV 524
NC P V P Q G L V LPSL L+ +R CP +L+C PQLR IG P
Sbjct: 32 NCSPSNVWPNCQFAGAAL*EVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLE 211
Query: 525 PLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMP 671
PL+ T TSPAPPTL++ T K PL N TPP H T IG MP
Sbjct: 212 PLMETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMP 358
Score = 75.3 bits (158), Expect(2) = 2e-076
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1 / -3
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GGACG+G+L GYG T LSTALF GA CG CY++KC
Sbjct: 681 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 532
Score = 37.7 bits (76), Expect(3) = 1e-029
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3 / +2
Query: 717 K*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K W GGL PP S GR * G + VAVT
Sbjct: 404 KCWRGGLHHPPLSLGRA*LGGHRFVAVT 487
Score = 35.0 bits (70), Expect(3) = 1e-029
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3 / +2
Query: 837 STHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
S H *Q P AP SAVL V +P P + P PH
Sbjct: 527 SLHFIW*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPH 643
>gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_35_D04_A029 5', mRNA sequence
Length = 751
Score = 232 bits (500), Expect(2) = 2e-076
Identities = 84/155 (54%), Positives = 117/155 (75%)
Frame = -1 / +1
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PNY LP D GG CNPP HF + +F+++A++++GI+PI +RRV C+R
Sbjct: 205 TVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVR 384
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW PM RNWGQ W N + GQ
Sbjct: 385 KGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNWQSNSYLNGQ 564
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQF 344
LSF++S+SDG+ +TS+N P +W++G+T+ G QF
Sbjct: 565 SLSFQVSTSDGRTITSYNAAPANWQFGQTFEGLQF 669
Score = 89.5 bits (189), Expect(3) = 8e-029
Identities = 49/106 (46%), Positives = 56/106 (52%)
Frame = +3 / -3
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G L V LPSL L+ +R CP +L+C PQLR IG P PL+
Sbjct: 659 PSNVWPNCQFAGAAL*DVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLEPLM 480
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMP 671
T TSPAPPTL++ T K PL N TPP H T IG MP
Sbjct: 479 ETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMP 342
Score = 75.3 bits (158), Expect(2) = 2e-076
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1 / +1
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GGACG+G+L GYG T LSTALF GA CG CY++KC
Sbjct: 19 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 168
Score = 38.6 bits (78), Expect(3) = 8e-029
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3 / -3
Query: 837 STHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
S H *Q PH AP SAVL V +P P + P PH
Sbjct: 173 SLHFIW*QAPHVAPLLKSAVLRAAVFVP*PWLYKLPYPH 57
Score = 37.7 bits (76), Expect(3) = 8e-029
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3 / -3
Query: 717 K*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K W GGL PP S GR * G + VAVT
Sbjct: 296 KCWRGGLHHPPLSLGRA*LGGHRFVAVT 213
>gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_1_F12_A029 5', mRNA sequence
Length = 733
Score = 215 bits (465), Expect(2) = 3e-076
Identities = 81/148 (54%), Positives = 109/148 (73%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ +TATNFC PN LP D GG CNPP HF + +FEKIA +K+GI+PI YRRV CLR
Sbjct: 290 TVRITATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFEKIAKYKSGIVPILYRRVPCLR 469
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF++ G +F VLISNVGGAGDV++V IK ++ GW PM RNWGQ W N + GQ
Sbjct: 470 KGGIRFTIAGHSYFNLVLISNVGGAGDVQAVSIKSSKTGWQPMSRNWGQNWQSNSLLNGQ 649
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGK 365
LSF++++SDG+ S+N P +W++G+
Sbjct: 650 SLSFKVTTSDGRTTVSYNTAPSNWQFGQ 733
Score = 101 bits (216), Expect(2) = 5e-029
Identities = 60/143 (41%), Positives = 67/143 (46%)
Frame = +3 / -2
Query: 369 PYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTDLT 548
P Q G L PSL ++ DR CP +L+C PQLR IG P I T T
Sbjct: 729 PNCQLEGAVLYETVVRPSLVVTLKDRLCPFNKELLCQFCPQLRDIGCQPVFELFIETAWT 550
Query: 549 SPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGRRK*WL 728
SPAPPTL + T K P PP +H T IG +P AIFS K
Sbjct: 549 SPAPPTLEMSTRLKYEWPAIVKRIPPFLKHGTLL*RIGTIPLLYLAIFSKAGSAMSKCCN 370
Query: 729 GGLQWPPASAGRP*FGAQKLVAV 797
GGL PP S GR FG QK VAV
Sbjct: 369 GGLHHPPLSLGRALFGGQKFVAV 301
Score = 90.9 bits (192), Expect(2) = 3e-076
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = -1 / +2
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y +D +GGACG+G+L GYG T LSTALF G +CG CYE+KC +D ++CLPG
Sbjct: 110 YGGSDASGTMGGACGYGNLYSQGYGTDTAALSTALFNNGFSCGACYEMKCNDDPQWCLPG 289
Query: 811 T 809
T
Sbjct: 290 T 292
Score = 46.9 bits (96), Expect(2) = 5e-029
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +3 / -2
Query: 804 MEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNP 950
+ VPG+ + SS H S*Q P P N AVLS V++P P R P P
Sbjct: 297 LTVPGKHHWGSSLHFIS*QAPQLNPLLNRAVLSAAVSVP*PWLYRFPYP 151
>gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_A08_A015 5', mRNA sequence
Length = 751
Score = 231 bits (498), Expect(2) = 4e-076
Identities = 84/155 (54%), Positives = 116/155 (74%)
Frame = -1 / +3
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PNY LP D GG CNPP HF + +F++ A++++GI+PI +RRV C+R
Sbjct: 252 TVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQFAIYRSGIVPIIFRRVPCVR 431
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW PM RNWGQ W N + GQ
Sbjct: 432 KGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNWQSNSYLNGQ 611
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQF 344
LSF++S+SDG+ +TS+N P +W++G+T+ G QF
Sbjct: 612 SLSFQVSTSDGRTITSYNAAPANWQFGQTFEGLQF 716
Score = 95.5 bits (202), Expect(3) = 2e-029
Identities = 51/109 (46%), Positives = 58/109 (53%)
Frame = +3 / -1
Query: 345 NCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSV 524
NC P V P Q G L V LPSL L+ +R CP +L+C PQLR IG P
Sbjct: 715 NCSPSNVWPNCQFAGAAL*DVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLE 536
Query: 525 PLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMP 671
PL+ T TSPAPPTL++ T K PL N TPP H T IG MP
Sbjct: 535 PLMETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMP 389
Score = 75.3 bits (158), Expect(2) = 4e-076
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1 / +3
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GGACG+G+L GYG T LSTALF GA CG CY++KC
Sbjct: 66 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 215
Score = 37.7 bits (76), Expect(3) = 2e-029
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3 / -1
Query: 717 K*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K W GGL PP S GR * G + VAVT
Sbjct: 343 KCWRGGLHHPPLSLGRA*LGGHRFVAVT 260
Score = 35.0 bits (70), Expect(3) = 2e-029
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3 / -1
Query: 837 STHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
S H *Q P AP SAVL V +P P + P PH
Sbjct: 220 SLHFIW*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPH 104
>gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_G12_A029 3', mRNA sequence
Length = 865
Score = 229 bits (494), Expect(2) = 6e-076
Identities = 84/155 (54%), Positives = 116/155 (74%)
Frame = -1 / -1
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PN LP D GG CNPP HF + +F++IA++++GI+PI +RR+ C+R
Sbjct: 484 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQQIAIYRSGIVPIMFRRIPCVR 305
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
EGGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNWGQ W N + GQ
Sbjct: 304 EGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNWQSNSYLNGQ 125
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQF 344
LSF++S+SDG+ +TS+NV P +W++G+T+ G QF
Sbjct: 124 TLSFQVSTSDGRIITSYNVAPANWQFGQTFEGVQF 20
Score = 121 bits (258), Expect(2) = 1e-033
Identities = 68/149 (45%), Positives = 76/149 (51%)
Frame = +3 / +3
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G TL V LPSL L+ +R CP +L+C PQLR I P PL+
Sbjct: 30 PSNVWPNCQFAGATL*EVMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLEPLM 209
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGR 713
T TSPAPPTL++ T K PL N TPPS H IG MP AI
Sbjct: 210 ETASTSPAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIC*KAGCAM 389
Query: 714 RK*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K W GGL PP S GR G Q+LVAVT
Sbjct: 390 SKCWRGGLHHPPLSLGRAELGGQRLVAVT 476
Score = 76.7 bits (161), Expect(2) = 6e-076
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = -1 / -1
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GGACG+G+L GYG T LSTALF GA CG CYE+KC
Sbjct: 670 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKC 521
Score = 43.2 bits (88), Expect(2) = 1e-033
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = +3 / +3
Query: 837 STHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
S H S*Q P AP SAVL V +PYP + P PH
Sbjct: 516 SLHFIS*QAPQVAPLLKSAVLRAAVFVPYPWLYKLPYPH 632
>gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_9_E12_A029 5', mRNA sequence
Length = 812
Score = 218 bits (471), Expect(2) = 6e-076
Identities = 83/148 (56%), Positives = 109/148 (73%)
Frame = -1 / +3
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
+IVVTATNFC PN LP +AGG CNPP HF L F+ IA ++AGI+P+ Y+RV C R
Sbjct: 369 AIVVTATNFCPPNNALPNNAGGWCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHR 548
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNWGQ W N + GQ
Sbjct: 549 SGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQ 728
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGK 365
LSF++++SDG+ +TS+N P +W++G+
Sbjct: 729 SLSFKVTTSDGRTVTSYNAAPSNWQFGQ 812
Score = 134 bits (287), Expect(2) = 7e-039
Identities = 70/146 (47%), Positives = 79/146 (54%)
Frame = +3 / -2
Query: 369 PYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTDLT 548
P Q LG L V+ LPSL ++ +R CPL L+C WPQLR IG HP P + T T
Sbjct: 808 PNCQLLGAAL*EVTVLPSLVVTLKERLCPLR*LLLCQFWPQLRDIGCHPVLEPFMETAWT 629
Query: 549 SPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGRRK*WL 728
SPAPPTL++RT K P T N PP T Y G MPA AI R K W
Sbjct: 628 SPAPPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWKTGSERSKCWR 449
Query: 729 GGLQWPPASAGRP*FGAQKLVAVTTM 806
GGL PPA G G QKLVAVTT+
Sbjct: 448 GGLHQPPALLGSALLGGQKLVAVTTI 371
Score = 87.2 bits (184), Expect(2) = 6e-076
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = -1 / +3
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y D +GGACG+G+L GYG +T LSTALF G +CG C+ ++C +D ++CLPG
Sbjct: 189 YGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQWCLPG 368
Query: 811 TSIV 800
+V
Sbjct: 369 AIVV 380
Score = 47.3 bits (97), Expect(2) = 7e-039
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +3 / -2
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
+ T PGR + SS H + Q P P SAVL V +PYP R P PH
Sbjct: 391 LVAVTTIAPGRHHCGSSLHRIAKQAPQLRPLLKSAVLRAAVLVPYPWLYRLP*PH 227
>gb|CO367410.1|CO367410 RTK1_34_D03.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_34_D03_A029 3', mRNA sequence
Length = 851
Score = 231 bits (498), Expect(2) = 3e-075
Identities = 85/155 (54%), Positives = 116/155 (74%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PN LP D GG CNPP HF + +F+KIA++++GI+PI +RR+ C+R
Sbjct: 161 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVR 340
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
EGGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNWGQ W N + GQ
Sbjct: 341 EGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNWQSNSYLNGQ 520
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQF 344
LSF++S+SDG+ +TS+NV P +W++G+T+ G QF
Sbjct: 521 TLSFQVSTSDGRIITSYNVAPANWQFGQTFEGVQF 625
Score = 124 bits (266), Expect(2) = 3e-033
Identities = 69/149 (46%), Positives = 77/149 (51%)
Frame = +3 / -3
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G TL V LPSL L+ +R CP +L+C PQLR I P PL+
Sbjct: 615 PSNVWPNCQFAGATL*EVMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLEPLM 436
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGR 713
T TSPAPPTL++ T K PL N TPPS H IG MP AIF
Sbjct: 435 ETASTSPAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*KAGCAM 256
Query: 714 RK*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K W GGL PP S GR G Q+LVAVT
Sbjct: 255 SKCWRGGLHHPPLSLGRAELGGQRLVAVT 169
Score = 72.5 bits (152), Expect(2) = 3e-075
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = -1 / +2
Query: 964 IGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
+GGACG+G+L GYG T LSTALF GA CG CYE+KC
Sbjct: 2 MGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKC 124
Score = 38.2 bits (77), Expect(2) = 3e-033
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3 / -3
Query: 837 STHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
S H S*Q P AP SAVL V +P P + P PH
Sbjct: 129 SLHFIS*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPH 13
>gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_38_A01_A029 5', mRNA sequence
Length = 765
Score = 215 bits (464), Expect(2) = 5e-075
Identities = 82/146 (56%), Positives = 107/146 (73%)
Frame = -1 / +1
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
+IVVTATNFC PN LP +AGG CNPP HF L F+ IA ++AGI+P+ Y+RV C R
Sbjct: 328 AIVVTATNFCPPNNALPNNAGGWCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHR 507
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNWGQ W N + GQ
Sbjct: 508 SGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQ 687
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEY 371
LSF++++SDG+ +TS+N P +W++
Sbjct: 688 SLSFKVTTSDGRTVTSYNAAPNNWQF 765
Score = 132 bits (283), Expect(2) = 3e-038
Identities = 69/143 (48%), Positives = 78/143 (54%)
Frame = +3 / -2
Query: 378 QSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTDLTSPA 557
Q LG L V+ LPSL ++ +R CPL L+C WPQLR IG HP P + T TSPA
Sbjct: 758 QLLGAAL*EVTVLPSLVVTLKERLCPLR*LLLCQFWPQLRDIGCHPVLEPFMETAWTSPA 579
Query: 558 PPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGRRK*WLGGL 737
PPTL++RT K P T N PP T Y G MPA AI R K W GGL
Sbjct: 578 PPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWKTGSERSKCWRGGL 399
Query: 738 QWPPASAGRP*FGAQKLVAVTTM 806
PPA G G QKLVAVTT+
Sbjct: 398 HQPPALLGSALLGGQKLVAVTTI 330
Score = 87.2 bits (184), Expect(2) = 5e-075
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = -1 / +1
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y D +GGACG+G+L GYG +T LSTALF G +CG C+ ++C +D ++CLPG
Sbjct: 148 YGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQWCLPG 327
Query: 811 TSIV 800
+V
Sbjct: 328 AIVV 339
Score = 47.3 bits (97), Expect(2) = 3e-038
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +3 / -2
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
+ T PGR + SS H + Q P P SAVL V +PYP R P PH
Sbjct: 350 LVAVTTIAPGRHHCGSSLHRIAKQAPQLRPLLKSAVLRAAVLVPYPWLYRLP*PH 186
>gb|DR097316.1|DR097316 STRR1_33_H05.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_33_H05_A033 5', mRNA sequence
Length = 794
Score = 217 bits (468), Expect(2) = 1e-074
Identities = 83/155 (53%), Positives = 110/155 (70%)
Frame = -1 / -1
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATNFC PN LP D GG CN P HF + +F++IA+ K GI+PI YRRV CLR
Sbjct: 617 TVTVTATNFCPPNNALPNDNGGWCNLPLQHFDMAEPAFQQIAICKGGIVPILYRRVPCLR 438
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF++NG +F VLI+NV GAGDV +V IKG+ GW M RNWGQ W N + GQ
Sbjct: 437 KGGIRFTINGHAYFNLVLITNVAGAGDVHAVSIKGSGSGWQAMSRNWGQNWQSNSYLNGQ 258
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQF 344
LSF++++SDGK S++V P W++G+T+ G QF
Sbjct: 257 SLSFQVTTSDGKTTVSYSVAPSGWQFGQTFEGSQF 153
Score = 111 bits (238), Expect(2) = 2e-031
Identities = 65/152 (42%), Positives = 73/152 (48%)
Frame = +3 / +1
Query: 345 NCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSV 524
N P V P Q G TL LPSL ++ DR CP +L+C PQLR + P
Sbjct: 154 NWLPSNVWPNCQPEGATL*ETVVLPSLVVTWKDRLCPFR*ELLCQFCPQLRDMACQPLPD 333
Query: 525 PLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDW 704
P I T TSPAP TL+IRT K PL PP + T IG +P AI
Sbjct: 334 PFIETAWTSPAPATLVIRTRLKYAWPLMVKRIPPFLKQGTLL*RIGTIPPLHMAICWKAG 513
Query: 705 MGRRK*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K W G L PP S GR FG QKLVAVT
Sbjct: 514 SAISKCWRGRLHHPPLSLGRALFGGQKLVAVT 609
Score = 84.0 bits (177), Expect(2) = 1e-074
Identities = 32/61 (52%), Positives = 40/61 (65%)
Frame = -1 / -1
Query: 982 ADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPGTSI 803
+D +GGACG+G+L GYG T LSTALF G +CG CYE+KC D ++CL GT
Sbjct: 788 SDASRTMGGACGYGNLYSQGYGTNTAALSTALFNDGLSCGSCYEMKCNNDPQWCLSGTVT 609
Query: 802 V 800
V
Sbjct: 608 V 606
Score = 45.1 bits (92), Expect(2) = 2e-031
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +3 / +1
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
+ T+ VP + + S H S*Q P +P SAVL V +P P R P PH
Sbjct: 595 LVAVTVTVPDKHHWGSLLHFIS*QDPQLSPSLKSAVLKAAVFVP*PWLYRLPYPH 759
>gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAD27 5' end, mRNA sequence
Length = 886
Score = 225 bits (486), Expect(2) = 2e-074
Identities = 83/155 (53%), Positives = 115/155 (74%)
Frame = -1 / +3
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PN LP D GG CNPP HF + +F+ IA++++GI+PI +RRV C+R
Sbjct: 354 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQHIAIYRSGIVPIMFRRVPCVR 533
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNWGQ W N + GQ
Sbjct: 534 KGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNWGQNWQSNSYLNGQ 713
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQF 344
LSF++++SDG+ +TS+NV P +W++G+T+ G QF
Sbjct: 714 TLSFQVTTSDGRIITSYNVAPANWQFGQTFEGLQF 818
Score = 94.1 bits (199), Expect(3) = 7e-030
Identities = 51/115 (44%), Positives = 60/115 (52%)
Frame = +3 / -1
Query: 345 NCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSV 524
NC P V P Q G TL V LPSL ++ +R CP +L+C PQLR I P
Sbjct: 817 NCSPSNVWPNCQFAGATL*EVMILPSLVVTWKERVCPFK*ELLCQFCPQLRDIACQPVLD 638
Query: 525 PLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAI 689
PL+ T TSPAPPTL++ T K PL N TPP H T IG +P AI
Sbjct: 637 PLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPFLTHGTLLNMIGTIPLLYMAI 473
Score = 75.3 bits (158), Expect(2) = 2e-074
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1 / +3
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GGACG+G+L GYG T LSTALF G+ CG CYE+KC
Sbjct: 168 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGSTCGACYEMKC 317
Score = 39.6 bits (80), Expect(3) = 7e-030
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3 / -1
Query: 717 K*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K W GGL PP S GR G Q+LVAVT
Sbjct: 445 KCWRGGLHHPPLSLGRAELGGQRLVAVT 362
Score = 35.9 bits (72), Expect(3) = 7e-030
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +3 / -1
Query: 843 HLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
H S*Q P P SAVL V +P P R P PH
Sbjct: 316 HFIS*QAPQVEPLLKSAVLRAAVFVP*PWLYRLPYPH 206
>gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAI31 5' end, mRNA sequence
Length = 844
Score = 223 bits (482), Expect(2) = 2e-074
Identities = 82/155 (52%), Positives = 114/155 (73%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PN LP D GG CNPP HF + +F+ I ++++GI+PI +RRV C+R
Sbjct: 335 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQHIPIYRSGIVPIMFRRVPCVR 514
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNWGQ W N + GQ
Sbjct: 515 KGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNWGQNWQSNSYLNGQ 694
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQF 344
LSF++++SDG+ +TS+NV P +W++G+T+ G QF
Sbjct: 695 SLSFQVTTSDGRTITSYNVAPANWQFGQTFEGLQF 799
Score = 92.3 bits (195), Expect(3) = 7e-030
Identities = 50/115 (43%), Positives = 59/115 (51%)
Frame = +3 / -2
Query: 345 NCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSV 524
NC P V P Q G TL V LPSL ++ +R CP +L+C PQLR I P
Sbjct: 798 NCSPSNVWPNCQFAGATL*EVMVLPSLVVTWKERLCPFK*ELLCQFCPQLRDIACQPVLD 619
Query: 525 PLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAI 689
PL+ T TSPAPPTL++ T K PL N TPP H T IG +P I
Sbjct: 618 PLMETASTSPAPPTLVMSTKLK*ECPLIVNRTPPFLTHGTLLNMIGTIPLLYMGI 454
Score = 77.1 bits (162), Expect(2) = 2e-074
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = -1 / +2
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GGACG+G+L GYG T LSTALF GA+CG CYE+KC
Sbjct: 149 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGASCGACYEMKC 298
Score = 39.6 bits (80), Expect(3) = 7e-030
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3 / -2
Query: 717 K*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K W GGL PP S GR G Q+LVAVT
Sbjct: 426 KCWRGGLHHPPLSLGRAELGGQRLVAVT 343
Score = 37.7 bits (76), Expect(3) = 7e-030
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +3 / -2
Query: 843 HLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
H S*Q P AP SAVL V +P P R P PH
Sbjct: 297 HFIS*QAPQLAPLLKSAVLRAAVFVP*PWLYRLPYPH 187
>gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACC87 3' end, mRNA sequence
Length = 772
Score = 211 bits (456), Expect(2) = 2e-074
Identities = 83/139 (59%), Positives = 104/139 (74%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
SIVVTATNFC PN LP D GG CNPP HF L F+ IA ++AGI+P+QYRRV C R
Sbjct: 341 SIVVTATNFCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQR 520
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF++NG +F VLI+NVGGAGDV +V +KG + GW PM RNWGQ W N + GQ
Sbjct: 521 KGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQ 700
Query: 448 PLSFELSSSDGKALTSFNV 392
LSF++++SDGK +TS+NV
Sbjct: 701 SLSFKVTTSDGKTVTSYNV 757
Score = 107 bits (228), Expect(2) = 3e-029
Identities = 61/139 (43%), Positives = 71/139 (51%)
Frame = +3 / -2
Query: 393 TLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTDLTSPAPPTLL 572
TL V+ PSL ++ +R CP L+C WPQ R IG P PL T TSPAPPTL+
Sbjct: 756 TL*EVTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPLTETASTSPAPPTLV 577
Query: 573 IRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGRRK*WLGGLQWPPA 752
+RT K PL PP T Y G +PA A+ R K GGL PP
Sbjct: 576 MRTRLKYEWPLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSERSKCSRGGLHQPPL 397
Query: 753 SAGRP*FGAQKLVAVTTME 809
S G G QKLVAVTT+E
Sbjct: 396 SLGSALLGGQKLVAVTTIE 340
Score = 88.6 bits (187), Expect(2) = 2e-074
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = -1 / +2
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y D +GGACG+G+L GYG T LSTALF G +CG CYE++C +D +CLPG
Sbjct: 161 YGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAWCLPG 340
Query: 811 TSIV 800
+ +V
Sbjct: 341 SIVV 352
Score = 42.3 bits (86), Expect(2) = 3e-029
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = +3 / -2
Query: 813 PGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNP 950
PGR + SS H S*Q P P N AVL V +P P R P P
Sbjct: 339 PGRHHAGSSLHWIS*QAPQLKPLLNKAVLRAAVLVP*PWLYRLP*P 202
>gb|DR163657.1|DR163657 RTFE1_44_D12.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_44_D12_A029 3', mRNA sequence
Length = 769
Score = 276 bits (597), Expect = 2e-073
Identities = 100/153 (65%), Positives = 123/153 (80%)
Frame = -1 / +1
Query: 799 VTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLREGG 620
VTATNFC PNYGLP D GG CNPP HF+LP+ +FEKIA+WK G M +QYRRV+C + GG
Sbjct: 1 VTATNFCPPNYGLPGDDGGWCNPPRQHFVLPVTAFEKIAMWKIGTMNVQYRRVRCAKVGG 180
Query: 619 VRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQPLS 440
+RF++NG+ FF TVLISNV G G V VK+KG++ GWL MGRNWGQ WH+N D RGQ LS
Sbjct: 181 MRFAINGKDFFLTVLISNVAGDGAVSGVKVKGSKTGWLSMGRNWGQNWHVNADYRGQALS 360
Query: 439 FELSSSDGKALTSFNVVPKDWEYGKTYTGKQFL 341
FE+++SDGK +TS+NV P DW++G TY GKQF+
Sbjct: 361 FEVTTSDGKTVTSYNVAPSDWQFGHTYKGKQFV 459
Score = 190 bits (410), Expect = 1e-047
Identities = 86/154 (55%), Positives = 98/154 (63%)
Frame = +3 / -3
Query: 336 YRRNCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHP 515
++ NCFP+ V P QS G TL V+ LPSL ++SNDR CPL S L C PQ PI SHP
Sbjct: 464 FQTNCFPL*VWPNCQSEGATL*EVTVLPSLVVTSNDRACPL*SALTCQFCPQFLPIDSHP 285
Query: 516 NSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFS 695
PL FT LT+P+P TLLIRTV+KK P NL PP+ H T YW M+P F AIFS
Sbjct: 284 VFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANLIPPTFAHRTLLYWTFMVPIFHMAIFS 105
Query: 696 NDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAV 797
G K W GGL PP+S GRP*FG QK VAV
Sbjct: 104 KAVTGNTKCWRGGLHHPPSSPGRP*FGGQKFVAV 3
>gb|DR180723.1|DR180723 RTMNUT1_34_A06.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_34_A06_A029 5', mRNA sequence
Length = 773
Score = 119 bits (255), Expect(3) = 3e-073
Identities = 43/82 (52%), Positives = 60/82 (73%)
Frame = -1 / +3
Query: 592 FFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQPLSFELSSSDGK 413
+F VLISNVGGAGDV++V IK ++ GW PM RNWGQ W N + GQ LSF++++SDG+
Sbjct: 516 YFNLVLISNVGGAGDVQAVSIKSSKTGWQPMSRNWGQNWQSNSLLNGQSLSFKVTTSDGR 695
Query: 412 ALTSFNVVPKDWEYGKTYTGKQ 347
S+N P +W++G+T+ G Q
Sbjct: 696 TTVSYNTAPSNWQFGQTFQGSQ 761
Score = 106 bits (227), Expect(3) = 3e-073
Identities = 40/73 (54%), Positives = 54/73 (73%)
Frame = -1 / +3
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ +TATNFC PN LP D GG CNPP HF + +FEKIA +K+GI+PI YRR+ CLR
Sbjct: 303 TVRITATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFEKIAKYKSGIVPILYRRIPCLR 482
Query: 628 EGGVRFSVNGRHF 590
+GG+RF++ +F
Sbjct: 483 KGGIRFTIAHSYF 521
Score = 89.0 bits (188), Expect(3) = 3e-073
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = -1 / +3
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y +D +GGACG+ +L GYG TV LSTALF G +CG CYE+KC +D ++CLPG
Sbjct: 123 YGGSDASGTMGGACGYENLYSQGYGTDTVALSTALFNNGFSCGACYEMKCNDDPQWCLPG 302
Query: 811 T 809
T
Sbjct: 303 T 305
Score = 61.1 bits (127), Expect(3) = 2e-024
Identities = 34/90 (37%), Positives = 43/90 (47%)
Frame = +3 / -2
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G L PSL ++ DR CP +L+C PQLR +G P I
Sbjct: 754 PWNVWPNCQLEGAVLYETVVRPSLVVTLKDRLCPFNKELLCQFCPQLRDMGCQPVFELFI 575
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTP 623
T TSPAPPTL + T K + + + P
Sbjct: 574 ETAWTSPAPPTLEMSTRLKYEWAIVKRIPP 485
Score = 45.5 bits (93), Expect(3) = 2e-024
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +3 / -2
Query: 804 MEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNP 950
+ VPG+ + SS H S*Q P P N AVLS TV++P P R P
Sbjct: 310 LTVPGKHHWGSSLHFIS*QAPQLNPLLNRAVLSATVSVP*PWLYRFSYP 164
Score = 44.1 bits (90), Expect(3) = 2e-024
Identities = 23/47 (48%), Positives = 24/47 (51%)
Frame = +3 / -2
Query: 657 IGMMPAFQSAIFSNDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAV 797
IG +P AIFS K GGL PP S GR FG QK VAV
Sbjct: 454 IGTIPLLYLAIFSKAGSAMSKCCNGGLHHPPLSLGRALFGGQKFVAV 314
>gb|CO368748.1|CO368748 RTK1_42_C07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_C07_A029 5', mRNA sequence
Length = 700
Score = 221 bits (478), Expect(2) = 8e-073
Identities = 81/155 (52%), Positives = 115/155 (74%)
Frame = -1 / +3
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PN LP D GG CNPP HF + +F++IA++++GI+PI +RRV C+R
Sbjct: 201 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQQIAIYRSGIVPIMFRRVPCVR 380
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GGVRF++NG +F VLI+NVGG GDV +V IKG++ GW M RNWGQ W N + GQ
Sbjct: 381 KGGVRFAINGHSYFNLVLITNVGGVGDVEAVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQ 560
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQF 344
LSF++++SDG+ +TS+NV +W++G+T+ G QF
Sbjct: 561 TLSFQVTTSDGRTITSYNVASANWQFGQTFEGLQF 665
Score = 123 bits (264), Expect(2) = 8e-033
Identities = 68/152 (44%), Positives = 77/152 (50%)
Frame = +3 / -1
Query: 345 NCFPVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSV 524
NC P V P Q TL V LPSL ++ +R CP +L+C PQLR I P
Sbjct: 664 NCSPSNVWPNCQFAEATL*EVMVLPSLVVTWKERVCPFK*ELLCQFCPQLRDIACQPVLE 485
Query: 525 PLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDW 704
PL+ T TSP PPTL++ T K PL N TPP H T IG MP AI N
Sbjct: 484 PLMETASTSPTPPTLVMSTKLK*ECPLIANRTPPFLTHGTLLNMIGTMPLLYMAIC*NAG 305
Query: 705 MGRRK*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K W GGL PP S GR G Q+LVAVT
Sbjct: 304 *AMSKCWRGGLHHPPLSLGRAELGGQRLVAVT 209
Score = 73.5 bits (154), Expect(2) = 8e-073
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = -1 / +3
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GG CG+G+L GYG T LSTALF GA CG CY++KC
Sbjct: 15 YGGSDASGTMGGVCGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 164
Score = 37.7 bits (76), Expect(2) = 8e-033
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3 / -1
Query: 843 HLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
H *Q P AP SAVL V +PYP + P PH
Sbjct: 163 HFIW*QAPQVAPLLKSAVLRAAVFVPYP*LYKLPYPH 53
>gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_B04_A029 5', mRNA sequence
Length = 810
Score = 220 bits (474), Expect(2) = 2e-072
Identities = 82/150 (54%), Positives = 110/150 (73%)
Frame = -1 / +1
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATNFC PNY LP D GG CNPP HF + +F +IA++K GI+PI +RRV C+R
Sbjct: 361 TVTVTATNFCPPNYALPNDNGGWCNPPLQHFDMAQPAFLQIAIYKGGIVPIMFRRVPCVR 540
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GGVRF++NG +F VLI+NV AGDV +V IKG+ GW M RNWGQ W N + GQ
Sbjct: 541 KGGVRFTINGHSYFNLVLITNVADAGDVEAVSIKGSNTGWQEMSRNWGQNWQSNSYLNGQ 720
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTY 359
LSF ++SSDG+ +TS+NV P +W++G+T+
Sbjct: 721 SLSFRVTSSDGRTVTSYNVAPANWQFGQTF 810
Score = 116 bits (249), Expect(2) = 2e-031
Identities = 66/146 (45%), Positives = 76/146 (52%)
Frame = +3 / -2
Query: 363 VLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTD 542
V P Q G TL V+ LPSL ++ +R CP +L+C PQLR I P PL+ T
Sbjct: 806 VWPNCQFAGATL*EVTVLPSLLVTRKERLCPFK*ELLCQFCPQLRDISCQPVLEPLMETA 627
Query: 543 LTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGRRK* 722
TSPA TL++ T K PL N TPP H T R +G MP AI K
Sbjct: 626 STSPASATLVMSTKLK*ECPLIVNRTPPFLTHGTLRNIMGTMPPL*MAICRKAG*AMSKC 447
Query: 723 WLGGLQWPPASAGRP*FGAQKLVAVT 800
W GGL PP S G *FG QKLVAVT
Sbjct: 446 WRGGLHHPPLSLGSA*FGGQKLVAVT 369
Score = 74.4 bits (156), Expect(2) = 2e-072
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = -1 / +1
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GGACG+G+L GYG T LSTALF G CG CYE+KC
Sbjct: 175 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLTCGACYEMKC 324
Score = 39.6 bits (80), Expect(2) = 2e-031
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3 / -2
Query: 843 HLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
H S*Q P +P SAVL V +PYP + P PH
Sbjct: 323 HFIS*QAPQVSPLLKSAVLRAAVFVPYPWLYKLP*PH 213
>gb|CO367487.1|CO367487 RTK1_34_D03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_34_D03_A029 5', mRNA sequence
Length = 788
Score = 216 bits (466), Expect(2) = 4e-072
Identities = 80/145 (55%), Positives = 108/145 (74%)
Frame = -1 / +1
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PN LP D GG CNPP HF + +F+KIA++++GI+PI +RR+ C+R
Sbjct: 352 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVR 531
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
EGGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNWGQ W N + GQ
Sbjct: 532 EGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNWQSNSYLNGQ 711
Query: 448 PLSFELSSSDGKALTSFNVVPKDWE 374
LSF++S+SDG+ +TS+NV P +W+
Sbjct: 712 TLSFQVSTSDGRIITSYNVAPANWQ 786
Score = 120 bits (257), Expect(2) = 5e-032
Identities = 66/141 (46%), Positives = 74/141 (52%)
Frame = +3 / -1
Query: 378 QSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTDLTSPA 557
Q G TL V LPSL L+ +R CP +L+C PQLR I P PL+ T TSPA
Sbjct: 782 QFAGATL*EVMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLEPLMETASTSPA 603
Query: 558 PPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGRRK*WLGGL 737
PPTL++ T K PL N TPPS H IG MP AIF K W GGL
Sbjct: 602 PPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*KAGCAMSKCWRGGL 423
Query: 738 QWPPASAGRP*FGAQKLVAVT 800
PP S GR G Q+LVAVT
Sbjct: 422 HHPPLSLGRAELGGQRLVAVT 360
Score = 76.7 bits (161), Expect(2) = 4e-072
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = -1 / +1
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GGACG+G+L GYG T LSTALF GA CG CYE+KC
Sbjct: 166 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKC 315
Score = 38.2 bits (77), Expect(2) = 5e-032
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3 / -1
Query: 837 STHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
S H S*Q P AP SAVL V +P P + P PH
Sbjct: 320 SLHFIS*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPH 204
>gb|DR050310.1|DR050310 RTBOR1_22_D04.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_22_D04_A029 5', mRNA sequence
Length = 806
Score = 215 bits (464), Expect(2) = 7e-072
Identities = 80/144 (55%), Positives = 107/144 (74%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PN LP D GG CNPP HF + +F+KIA++++GI+PI +RR+ C+R
Sbjct: 374 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVR 553
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
EGGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNWGQ W N + GQ
Sbjct: 554 EGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNWQSNSYLNGQ 733
Query: 448 PLSFELSSSDGKALTSFNVVPKDW 377
LSF++S+SDG+ +TS+NV P +W
Sbjct: 734 TLSFQVSTSDGRIITSYNVAPANW 805
Score = 120 bits (257), Expect(2) = 5e-032
Identities = 66/141 (46%), Positives = 74/141 (52%)
Frame = +3 / -3
Query: 378 QSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTDLTSPA 557
Q G TL V LPSL L+ +R CP +L+C PQLR I P PL+ T TSPA
Sbjct: 804 QFAGATL*EVMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLEPLMETASTSPA 625
Query: 558 PPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGRRK*WLGGL 737
PPTL++ T K PL N TPPS H IG MP AIF K W GGL
Sbjct: 624 PPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*KAGCAMSKCWRGGL 445
Query: 738 QWPPASAGRP*FGAQKLVAVT 800
PP S GR G Q+LVAVT
Sbjct: 444 HHPPLSLGRAELGGQRLVAVT 382
Score = 76.7 bits (161), Expect(2) = 7e-072
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = -1 / +2
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GGACG+G+L GYG T LSTALF GA CG CYE+KC
Sbjct: 188 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYEMKC 337
Score = 38.2 bits (77), Expect(2) = 5e-032
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3 / -3
Query: 837 STHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
S H S*Q P AP SAVL V +P P + P PH
Sbjct: 342 SLHFIS*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPH 226
>gb|DR683982.1|DR683982 EST1074058 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAN59 3' end, mRNA sequence
Length = 876
Score = 228 bits (493), Expect(2) = 1e-071
Identities = 86/154 (55%), Positives = 114/154 (74%)
Frame = -1 / +2
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
S+ VTATNFC PN LP + GG CNPP HF + +FEKIA +K+GI+PI YRRV CLR
Sbjct: 110 SVTVTATNFCPPNNALPNNNGGWCNPPLRHFDMAEPAFEKIAKYKSGIVPILYRRVPCLR 289
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF++NG +F VLISNVGGAGDV++V IKG+ W PM RNWGQ W N + GQ
Sbjct: 290 KGGIRFTINGLPYFNLVLISNVGGAGDVQAVSIKGSNTSWQPMSRNWGQNWQSNSFLNGQ 469
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQ 347
LSF++++SDG+ + S+N P +W++G+T+ G Q
Sbjct: 470 SLSFKVTTSDGRTIVSYNAAPSNWQFGQTFQGSQ 571
Score = 103 bits (220), Expect(2) = 3e-027
Identities = 62/149 (41%), Positives = 70/149 (46%)
Frame = +3 / -1
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G L PSL ++ DR CP +L+C PQLR IG P I
Sbjct: 564 PWNVWPNCQLEGAALYETIVRPSLVVTLKDRLCPFKKELLCQFCPQLRDIGCQLVFDPFI 385
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGR 713
T TSPAPPTL + T K RPL PP + T +G +P AIFS
Sbjct: 384 ETAWTSPAPPTLEMSTRLKYGRPLMVKRIPPFLKQGTLL*RMGTIPLLYLAIFSKAGSAM 205
Query: 714 RK*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K GGL PP GR G QKLVAVT
Sbjct: 204 SKCRRGGLHHPPLLLGRALLGGQKLVAVT 118
Score = 62.9 bits (131), Expect(2) = 1e-071
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = -1 / +2
Query: 919 GMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPGTSIV 800
G T LSTALF G +CG CYE+KC++D ++CLPG+ V
Sbjct: 2 GTDTAALSTALFNNGLSCGACYEMKCIDDPEWCLPGSVTV 121
Score = 39.1 bits (79), Expect(2) = 3e-027
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3 / -1
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIP 920
+ T+ +PG+ + SS H S* P +P N AVL V++P
Sbjct: 132 LVAVTVTLPGKHHSGSSIHFIS*HAPQLSPLLNKAVLRAAVSVP 1
>gb|DT631935.1|DT631935 EST1146866 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFE52 3' end, mRNA sequence
Length = 858
Score = 228 bits (493), Expect(2) = 1e-071
Identities = 86/154 (55%), Positives = 114/154 (74%)
Frame = -1 / +1
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
S+ VTATNFC PN LP + GG CNPP HF + +FEKIA +K+GI+PI YRRV CLR
Sbjct: 118 SVTVTATNFCPPNNALPNNNGGWCNPPLRHFDMAEPAFEKIAKYKSGIVPILYRRVPCLR 297
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GG+RF++NG +F VLISNVGGAGDV++V IKG+ W PM RNWGQ W N + GQ
Sbjct: 298 KGGIRFTINGLPYFNLVLISNVGGAGDVQAVSIKGSNTSWQPMSRNWGQNWQSNSFLNGQ 477
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTYTGKQ 347
LSF++++SDG+ + S+N P +W++G+T+ G Q
Sbjct: 478 SLSFKVTTSDGRTIVSYNAAPSNWQFGQTFQGSQ 579
Score = 103 bits (220), Expect(2) = 3e-027
Identities = 62/149 (41%), Positives = 70/149 (46%)
Frame = +3 / -2
Query: 354 PVYVLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLI 533
P V P Q G L PSL ++ DR CP +L+C PQLR IG P I
Sbjct: 572 PWNVWPNCQLEGAALYETIVRPSLVVTLKDRLCPFKKELLCQFCPQLRDIGCQLVFDPFI 393
Query: 534 FTDLTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGR 713
T TSPAPPTL + T K RPL PP + T +G +P AIFS
Sbjct: 392 ETAWTSPAPPTLEMSTRLKYGRPLMVKRIPPFLKQGTLL*RMGTIPLLYLAIFSKAGSAM 213
Query: 714 RK*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K GGL PP GR G QKLVAVT
Sbjct: 212 SKCRRGGLHHPPLLLGRALLGGQKLVAVT 126
Score = 62.9 bits (131), Expect(2) = 1e-071
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = -1 / +1
Query: 919 GMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPGTSIV 800
G T LSTALF G +CG CYE+KC++D ++CLPG+ V
Sbjct: 10 GTDTAALSTALFNNGLSCGACYEMKCIDDPEWCLPGSVTV 129
Score = 39.1 bits (79), Expect(2) = 3e-027
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3 / -2
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIP 920
+ T+ +PG+ + SS H S* P +P N AVL V++P
Sbjct: 140 LVAVTVTLPGKHHSGSSIHFIS*HAPQLSPLLNKAVLRAAVSVP 9
>gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAZ77 3' end, mRNA sequence
Length = 848
Score = 216 bits (466), Expect(2) = 1e-071
Identities = 80/150 (53%), Positives = 111/150 (74%)
Frame = -1 / +3
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
++ VTATN C PN LP D GG CNPP HF + +F+ IA +++GI+PI +RRV C+R
Sbjct: 399 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQHIATYRSGIVPIIFRRVPCVR 578
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
+GGVRF++NG +F VLI+NVGGAGDV +V IKG+ GW M RNWGQ W N + GQ
Sbjct: 579 KGGVRFTINGHPYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNWGQNWQSNSYLNGQ 758
Query: 448 PLSFELSSSDGKALTSFNVVPKDWEYGKTY 359
LSF++++SDG+ +TS+NV P +W++G+T+
Sbjct: 759 ALSFQVTTSDGRTITSYNVAPANWQFGQTF 848
Score = 92.7 bits (196), Expect(3) = 9e-030
Identities = 50/109 (45%), Positives = 57/109 (52%)
Frame = +3 / -2
Query: 363 VLPYSQSLGTTLKLVSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTD 542
V P Q G TL V LPSL ++ DR CP +L+C PQLR I P PL+ T
Sbjct: 844 VWPNCQFAGATL*EVMVLPSLVVTWKDRACPFK*ELLCQFCPQLRDIACQPVLEPLMETA 665
Query: 543 LTSPAPPTLLIRTVKKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAI 689
TSPAPPTL++ T K PL N TPP H T IG MP AI
Sbjct: 664 STSPAPPTLVMSTKLK*GCPLIVNRTPPFLTHGTLLKMIGTMPLLYVAI 518
Score = 75.3 bits (158), Expect(2) = 1e-071
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1 / +3
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKC 842
Y +D +GGACG+G+L GYG T LSTALF GA CG CY++KC
Sbjct: 213 YGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGATCGACYQMKC 362
Score = 39.6 bits (80), Expect(3) = 9e-030
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3 / -2
Query: 717 K*WLGGLQWPPASAGRP*FGAQKLVAVT 800
K W GGL PP S GR G Q+LVAVT
Sbjct: 490 KCWRGGLHHPPLSLGRAELGGQRLVAVT 407
Score = 36.8 bits (74), Expect(3) = 9e-030
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +3 / -2
Query: 843 HLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
H *Q P AP AVL V +PYP + P PH
Sbjct: 361 HFIW*QAPQVAPLLKRAVLRAAVLVPYPWLYKLPYPH 251
>gb|DR070312.1|DR070312 RTDK1_12_C03.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_12_C03_A029 5', mRNA sequence
Length = 710
Score = 204 bits (440), Expect(2) = 1e-071
Identities = 80/138 (57%), Positives = 102/138 (73%)
Frame = -1 / +3
Query: 808 SIVVTATNFCAPNYGLPADAGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLR 629
+IVVTATNFC PN LP +AGG CNPP HF L F+ IA ++AGI+P+ Y+RV C R
Sbjct: 291 AIVVTATNFCPPNNALPNNAGGWCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHR 470
Query: 628 EGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLPMGRNWGQVWHINCDMRGQ 449
GG+RF+VNG +F VLI+NVGGAGDV +V IKG+ GW PM RNWGQ W N + GQ
Sbjct: 471 SGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQ 650
Query: 448 PLSFELSSSDGKALTSFN 395
LSF++++SDG+ +TS+N
Sbjct: 651 SLSFKVTTSDGRTVTSYN 704
Score = 127 bits (273), Expect(2) = 6e-037
Identities = 65/134 (48%), Positives = 74/134 (55%)
Frame = +3 / -2
Query: 405 VSALPSLELSSNDRGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTDLTSPAPPTLLIRTV 584
V+ LPSL ++ +R CPL L+C WPQLR IG HP P + T TSPAPPTL++RT
Sbjct: 694 VTVLPSLVVTLKERLCPLR*LLLCQFWPQLRDIGCHPVLEPFMETAWTSPAPPTLVMRTR 515
Query: 585 KKKCRPLTENLTPPSRRHLTRRYWIGMMPAFQSAIFSNDWMGRRK*WLGGLQWPPASAGR 764
K P T N PP T Y G MPA AI R K W GGL PPA G
Sbjct: 514 LKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWKTGSERSKCWRGGLHQPPALLGS 335
Query: 765 P*FGAQKLVAVTTM 806
G QKLVAVTT+
Sbjct: 334 ALLGGQKLVAVTTI 293
Score = 87.2 bits (184), Expect(2) = 1e-071
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = -1 / +3
Query: 991 YYAADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPG 812
Y D +GGACG+G+L GYG +T LSTALF G +CG C+ ++C +D ++CLPG
Sbjct: 111 YGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQWCLPG 290
Query: 811 TSIV 800
+V
Sbjct: 291 AIVV 302
Score = 47.3 bits (97), Expect(2) = 6e-037
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +3 / -2
Query: 789 VAVTTMEVPGRQYLRSSTHLTS*QPPHAAPRSNSAVLSPTVAIPYPCFPRSPNPH 953
+ T PGR + SS H + Q P P SAVL V +PYP R P PH
Sbjct: 313 LVAVTTIAPGRHHCGSSLHRIAKQAPQLRPLLKSAVLRAAVLVPYPWLYRLP*PH 149
>gb|DT637181.1|DT637181 EST1152112 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH060 3' end, mRNA sequence
Length = 848
Score = 269 bits (582), Expect = 3e-071
Identities = 98/152 (64%), Positives = 120/152 (78%)
Frame = -1 / +3
Query: 901 LSTALFERGAACGGCYEVKCVEDLKYCLPGTSIVVTATNFCAPNYGLPADAGGHCNPPNH 722
LS+ L+ G ACG C+E++CVED YC PGTSIVVTATNFC P+YGLP D GG CNPP
Sbjct: 312 LSSVLYNGGQACGACFELRCVEDPLYCHPGTSIVVTATNFCPPSYGLPGDDGGWCNPPRQ 491
Query: 721 HFLLPIQSFEKIALWKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVR 542
HF+LP+ +FEKIA+WK G M +QYRRV+C + GG+RF++NG+ FF TVLISNV G G V
Sbjct: 492 HFVLPVTAFEKIAMWKIGTMNVQYRRVRCAKVGGMRFAINGKDFFLTVLISNVAGDGAVS 671
Query: 541 SVKIKGTELGWLPMGRNWGQVWHINCDMRGQP 446
VK+KG++ GWL MGRNWGQ WH+N D RG+P
Sbjct: 672 GVKVKGSKTGWLSMGRNWGQNWHVNADYRGKP 767
Score = 178 bits (384), Expect = 5e-044
Identities = 82/145 (56%), Positives = 92/145 (63%)
Frame = +3 / -2
Query: 444 RGCPLMSQLMCHTWPQLRPIGSHPNSVPLIFTDLTSPAPPTLLIRTVKKKCRPLTENLTP 623
+G PL S L C PQ PI SHP PL FT LT+P+P TLLIRTV+KK P NL P
Sbjct: 769 QGLPL*SALTCQFCPQFLPIDSHPVFEPLTFTPLTAPSPATLLIRTVRKKSFPFMANLIP 590
Query: 624 PSRRHLTRRYWIGMMPAFQSAIFSNDWMGRRK*WLGGLQWPPASAGRP*FGAQKLVAVTT 803
P+ H T YW M+P F AIFS G K W GGL PP+S GRP* G QK VAVTT
Sbjct: 589 PTFAHRTLLYWTFMVPIFHMAIFSKAVTGNTKCWRGGLHHPPSSPGRP*LGGQKFVAVTT 410
Query: 804 MEVPGRQYLRSSTHLTS*QPPHAAP 878
++VPG Q SSTHL+S Q PHA P
Sbjct: 409 IDVPGWQ*RGSSTHLSSKQAPHA*P 335
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 543,187,535
Number of Sequences: 355925
Number of extensions: 7744859
Number of successful extensions: 41126
Number of sequences better than 1.0e-020: 279
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 17996737920
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)