TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306429.2.4
(806 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF477622.1|CF477622 RTWW3_9_B03.b1_A022 Well-watered lob... 246 1e-064
gb|DR019596.1|DR019596 STRS1_31_D05.b1_A034 Shoot tip pitch... 246 1e-064
gb|DR019640.1|DR019640 STRS1_31_H11.b1_A034 Shoot tip pitch... 246 1e-064
gb|DR019670.1|DR019670 STRS1_31_D05.g1_A034 Shoot tip pitch... 246 1e-064
gb|DR052378.1|DR052378 RTCA1_4_F07.b1_A029 Roots minus calc... 246 1e-064
gb|DR052459.1|DR052459 RTCA1_4_F07.g1_A029 Roots minus calc... 246 1e-064
gb|DR055729.1|DR055729 RTCA1_25_C02.g1_A029 Roots minus cal... 246 1e-064
gb|DR081506.1|DR081506 RTFEPL1_30_D11.b1_A029 Roots plus ad... 246 1e-064
gb|DR093835.1|DR093835 STRR1_10_E06.g1_A033 Stem Response R... 246 1e-064
gb|DR094103.1|DR094103 STRR1_12_B03.g1_A033 Stem Response R... 246 1e-064
gb|DR164307.1|DR164307 RTFE1_48_D09.b1_A029 Roots minus iro... 246 1e-064
gb|DR013586.1|DR013586 HEAT1_20_F02.b1_A029 Root at 37 C fo... 244 5e-064
gb|DR024579.1|DR024579 STRS1_66_A03.b1_A034 Shoot tip pitch... 240 1e-062
gb|CX652294.1|CX652294 COLD1_58_E05.b1_A029 Root cold Pinus... 213 1e-054
gb|DR111231.1|DR111231 RTS1_16_F03.b1_A029 Roots minus sulf... 203 1e-051
gb|DR110861.1|DR110861 RTS1_13_B02.g1_A029 Roots minus sulf... 161 4e-039
gb|DR048711.1|DR048711 RTBOR1_10_E10.g1_A029 Roots plus add... 90 6e-033
gb|CO169436.1|CO169436 NDL1_7_C03.b1_A029 Needles control P... 135 4e-031
gb|DR019869.1|DR019869 STRS1_33_B04.b1_A034 Shoot tip pitch... 78 1e-030
gb|CO164776.1|CO164776 FLD1_50_F04.b1_A029 Root flooded Pin... 78 1e-030
gb|DR094032.1|DR094032 STRR1_12_B03.b1_A033 Stem Response R... 133 2e-030
gb|CO162557.1|CO162557 FLD1_36_C02.b1_A029 Root flooded Pin... 72 6e-028
gb|DR080921.1|DR080921 RTFEPL1_26_D08.b1_A029 Roots plus ad... 80 1e-027
gb|DR014803.1|DR014803 HEAT1_51_E12.g1_A029 Root at 37 C fo... 80 2e-027
gb|CX712929.1|CX712929 RTPQ1_5_F12.g1_A032 Roots treated wi... 80 2e-027
gb|CO162371.1|CO162371 FLD1_34_H05.g1_A029 Root flooded Pin... 80 2e-027
gb|AF072736.1|AF072736 Pinus contorta beta-glucosidase mRNA... 80 5e-027
gb|CO361958.1|CO361958 NDL2_8_E08.b1_A029 Needles control 2... 83 1e-026
gb|BX250956.1|BX250956 BX250956 Pinus pinaster differenciat... 80 2e-026
gb|AW042637.1|AW042637 ST24C01 Pine TriplEx shoot tip libra... 78 2e-026
gb|CF668848.1|CF668848 RTCNT1_39_C01.b1_A029 Root control P... 80 3e-026
gb|CX646974.1|CX646974 COLD1_12_D12.g1_A029 Root cold Pinus... 68 5e-026
gb|DR095084.1|DR095084 STRR1_18_E04.g1_A033 Stem Response R... 80 6e-026
gb|CX652916.1|CX652916 COLD1_62_F11.b1_A029 Root cold Pinus... 80 6e-026
gb|AW010487.1|AW010487 ST07D06 Pine TriplEx shoot tip libra... 92 4e-025
gb|BX254352.1|BX254352 BX254352 Pinus pinaster differenciat... 64 1e-024
gb|BX679902.1|BX679902 BX679902 RS Pinus pinaster cDNA clon... 79 3e-024
gb|DR013536.1|DR013536 HEAT1_19_H11.g1_A029 Root at 37 C fo... 72 1e-023
gb|CO199421.1|CO199421 GEO2_1_C06.b1_A032 Root gravitropism... 75 2e-023
gb|CO369254.1|CO369254 RTK1_46_A07.b1_A029 Roots minus pota... 72 2e-023
gb|CO369338.1|CO369338 RTK1_46_A07.g1_A029 Roots minus pota... 72 2e-023
gb|DR744663.1|DR744663 RTCU1_24_B09.b1_A029 Roots plus adde... 73 3e-023
gb|CF390062.1|CF390062 RTDR2_12_E07.b1_A021 Loblolly pine r... 71 4e-023
gb|DR020312.1|DR020312 STRS1_36_C01.b1_A034 Shoot tip pitch... 78 8e-023
gb|CF390726.1|CF390726 RTDR2_17_D05.g1_A021 Loblolly pine r... 83 8e-023
gb|CO158951.1|CO158951 FLD1_10_G08.b1_A029 Root flooded Pin... 107 8e-023
gb|CO158039.1|CO158039 FLD1_4_C03.b1_A029 Root flooded Pinu... 80 1e-022
dbj|BD224353.1| Materials and methods for the modification ... 97 1e-022
dbj|BD224416.1| Materials and methods for the modification ... 97 1e-022
gb|DR385366.1|DR385366 RTHG1_8_F01.b1_A029 Roots plus added... 72 1e-022
gb|DR690593.1|DR690593 EST1080679 Normalized pine embryo li... 63 2e-022
gb|CX650807.1|CX650807 COLD1_48_F06.b1_A029 Root cold Pinus... 70 5e-022
gb|DR054591.1|DR054591 RTCA1_18_G02.b1_A029 Roots minus cal... 105 5e-022
gb|BG039942.1|BG039942 NXSI_101_H03_F NXSI (Nsf Xylem Side ... 62 9e-022
gb|BM133460.1|BM133460 NXLV_006_G10_F NXLV (Nsf Xylem Late ... 103 2e-021
>gb|CF477622.1|CF477622 RTWW3_9_B03.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_9_B03_A022 3', mRNA sequence
Length = 667
Score = 246 bits (532), Expect = 1e-064
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = +3 / +1
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 58 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 237
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSL
Sbjct: 238 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSL 417
Query: 363 LDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
LDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 418 LDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 555
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / -3
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 521 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 342
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 341 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 162
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 161 IGTPLRA 141
>gb|DR019596.1|DR019596 STRS1_31_D05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_D05_A034 3', mRNA sequence
Length = 865
Score = 246 bits (532), Expect = 1e-064
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = +3 / -1
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 604 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 425
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSL
Sbjct: 424 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSL 245
Query: 363 LDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
LDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 244 LDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 107
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / +3
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 141 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 320
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 321 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 500
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 501 IGTPLRA 521
>gb|DR019640.1|DR019640 STRS1_31_H11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_H11_A034 3', mRNA sequence
Length = 794
Score = 246 bits (532), Expect = 1e-064
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = +3 / +2
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 185 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 364
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSL
Sbjct: 365 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSL 544
Query: 363 LDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
LDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 545 LDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 682
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / -3
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 648 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 469
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 468 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 289
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 288 IGTPLRA 268
>gb|DR019670.1|DR019670 STRS1_31_D05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_D05_A034 5', mRNA sequence
Length = 756
Score = 246 bits (532), Expect = 1e-064
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = +3 / -1
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 576 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 397
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSL
Sbjct: 396 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSL 217
Query: 363 LDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
LDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 216 LDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 79
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / +2
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 113 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 292
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 293 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 472
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 473 IGTPLRA 493
>gb|DR052378.1|DR052378 RTCA1_4_F07.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_4_F07_A029 3', mRNA sequence
Length = 865
Score = 246 bits (532), Expect = 1e-064
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = +3 / +1
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 256 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 435
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSL
Sbjct: 436 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSL 615
Query: 363 LDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
LDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 616 LDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 753
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / -3
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 719 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 540
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 539 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 360
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 359 IGTPLRA 339
>gb|DR052459.1|DR052459 RTCA1_4_F07.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_4_F07_A029 5', mRNA sequence
Length = 932
Score = 246 bits (532), Expect = 1e-064
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = +3 / +1
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 397 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 576
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSL
Sbjct: 577 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSL 756
Query: 363 LDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
LDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 757 LDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 894
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / -1
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 860 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 681
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 680 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 501
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 500 IGTPLRA 480
>gb|DR055729.1|DR055729 RTCA1_25_C02.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_25_C02_A029 5', mRNA sequence
Length = 687
Score = 246 bits (532), Expect = 1e-064
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = +3 / -3
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 577 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 398
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSL
Sbjct: 397 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSL 218
Query: 363 LDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
LDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 217 LDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 80
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / +3
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 114 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 293
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 294 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 473
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 474 IGTPLRA 494
>gb|DR081506.1|DR081506 RTFEPL1_30_D11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_30_D11_A029 3', mRNA sequence
Length = 761
Score = 246 bits (532), Expect = 1e-064
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = +3 / +2
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 32 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 211
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSL
Sbjct: 212 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSL 391
Query: 363 LDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
LDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 392 LDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 529
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / -3
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 495 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 316
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 315 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 136
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 135 IGTPLRA 115
>gb|DR093835.1|DR093835 STRR1_10_E06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_10_E06_A033 5', mRNA sequence
Length = 788
Score = 246 bits (532), Expect = 1e-064
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = +3 / -1
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 593 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 414
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSL
Sbjct: 413 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSL 234
Query: 363 LDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
LDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 233 LDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 96
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / +1
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 130 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 309
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 310 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 489
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 490 IGTPLRA 510
>gb|DR094103.1|DR094103 STRR1_12_B03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_B03_A033 5', mRNA sequence
Length = 864
Score = 246 bits (532), Expect = 1e-064
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = +3 / -1
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 552 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 373
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSL
Sbjct: 372 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSL 193
Query: 363 LDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
LDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 192 LDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 55
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / +2
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 89 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 268
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 269 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 448
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 449 IGTPLRA 469
>gb|DR164307.1|DR164307 RTFE1_48_D09.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_48_D09_A029 3', mRNA sequence
Length = 868
Score = 246 bits (532), Expect = 1e-064
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = +3 / +3
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 267 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 446
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSL
Sbjct: 447 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSL 626
Query: 363 LDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
LDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 627 LDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 764
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / -1
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 730 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 551
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 550 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 371
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 370 IGTPLRA 350
>gb|DR013586.1|DR013586 HEAT1_20_F02.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_20_F02_A029 3', mRNA sequence
Length = 740
Score = 244 bits (528), Expect = 5e-064
Identities = 93/163 (57%), Positives = 117/163 (71%)
Frame = +3 / +1
Query: 12 YMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYG 191
YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE YG
Sbjct: 1 YMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYG 180
Query: 192 NPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDN 371
NPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSLLDN
Sbjct: 181 NPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDN 360
Query: 372 FEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
FEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 361 FEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 489
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / -1
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 455 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 276
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 275 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 96
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 95 IGTPLRA 75
>gb|DR024579.1|DR024579 STRS1_66_A03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_66_A03_A034 3', mRNA sequence
Length = 605
Score = 240 bits (518), Expect = 1e-062
Identities = 89/151 (58%), Positives = 112/151 (74%)
Frame = +3 / +2
Query: 48 SSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
+ Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE YGNPT+ ++ENGMD
Sbjct: 35 TDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMD 214
Query: 228 QPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFG 407
PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSLLDNFEW +GY+S+FG
Sbjct: 215 DPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFG 394
Query: 408 IVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
+VYVDF T +R+PK SAYWF +LQ+H* Q
Sbjct: 395 VVYVDFTTRKRYPKMSAYWFSKLLQRH*SPQ 487
Score = 138 bits (297), Expect = 3e-032
Identities = 74/127 (58%), Positives = 80/127 (62%)
Frame = -2 / -3
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 453 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 274
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGP 107
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA GP
Sbjct: 273 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALGP 94
Query: 106 IGLPLRA 86
IG PLRA
Sbjct: 93 IGTPLRA 73
>gb|CX652294.1|CX652294 COLD1_58_E05.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_58_E05_A029 3', mRNA sequence
Length = 502
Score = 213 bits (460), Expect = 1e-054
Identities = 80/130 (61%), Positives = 100/130 (76%)
Frame = +3 / +3
Query: 111 PQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYR 290
P+ANS WLYI P G+Y V Y+KE YGNPT+ ++ENGMD PGN+T L D RV +Y+
Sbjct: 3 PRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYK 182
Query: 291 SYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFR 470
SY+ L A++ GANV GYFAWSLLDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF
Sbjct: 183 SYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFS 362
Query: 471 DMLQKH*DLQ 500
+LQ+H* Q
Sbjct: 363 KLLQRH*SPQ 392
Score = 122 bits (261), Expect = 3e-027
Identities = 67/119 (56%), Positives = 73/119 (61%)
Frame = -2 / -1
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 358 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 179
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACG 110
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S LEFA G
Sbjct: 178 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQLEFALG 2
>gb|DR111231.1|DR111231 RTS1_16_F03.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_F03_A029 3', mRNA sequence
Length = 628
Score = 203 bits (438), Expect = 1e-051
Identities = 76/124 (61%), Positives = 95/124 (76%)
Frame = +3 / +3
Query: 129 WLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQL 308
WLYI P G+Y V Y+KE YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L
Sbjct: 6 WLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNL 185
Query: 309 KKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH 488
A++ GANV GYFAWSLLDNFEW +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H
Sbjct: 186 INAVNDGANVVGYFAWSLLDNFEWKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH 365
Query: 489 *DLQ 500
* Q
Sbjct: 366 *SPQ 377
Score = 113 bits (241), Expect = 2e-024
Identities = 63/114 (55%), Positives = 69/114 (60%)
Frame = -2 / -1
Query: 466 NQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL 287
NQ*AD FG+R V+KST*T PNL+ YP HSKLS +D AK P TFAP A + *LL
Sbjct: 343 NQ*ADIFGYRFRVVKST*TTPNLEVYPDFHSKLSSKDHAKYPTTFAPSFTALIKFCK*LL 164
Query: 286 *NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHL 125
* TL+ S V FPG SIPFS IVGFP S T Y P G M*S L
Sbjct: 163 **LTLMVSFSPAGSVTFPGSSIPFSERIIVGFP*CSFTYVTALYRPQGTM*SQL 2
>gb|DR110861.1|DR110861 RTS1_13_B02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_13_B02_A029 5', mRNA sequence
Length = 490
Score = 161 bits (347), Expect = 4e-039
Identities = 61/101 (60%), Positives = 78/101 (77%)
Frame = +3 / +1
Query: 198 TIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFE 377
T+ ++ENGMD PGN+T L D RV +Y+SY+ L A++ GANV GYFAWSLLDNFE
Sbjct: 13 TMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFE 192
Query: 378 WLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQ 500
W +GY+S+FG+VYVDF TL+R+PK SAYWF +LQ+H* Q
Sbjct: 193 WKSGYTSRFGVVYVDFTTLKRYPKMSAYWFSKLLQRH*SPQ 315
>gb|DR048711.1|DR048711 RTBOR1_10_E10.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_10_E10_A029 5', mRNA sequence
Length = 667
Score = 90.0 bits (190), Expect(3) = 6e-033
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = +3 / +3
Query: 249 DQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
DQ L D RV +++ Y+ L +AI +GA+V GYFAWSL+DNFEW GY+ +FG+V+VD+
Sbjct: 165 DQALNDTKRVNYFKGYLKALAEAIREGADVRGYFAWSLIDNFEWGQGYTKRFGLVFVDY 341
Score = 61.1 bits (127), Expect(3) = 6e-033
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +3 / +3
Query: 96 GKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
G IG +A S+WLYI P G + +L E+Y P IY+TENGMD
Sbjct: 6 GNTIGERAASEWLYIVPWGFRKVLKWLTERYNRPPIYVTENGMD 137
Score = 28.1 bits (55), Expect(3) = 6e-033
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3 / +3
Query: 432 LERHPKASAYWFRDML 479
L+R+PK+SA+WF L
Sbjct: 351 LKRYPKSSAHWFTSFL 398
>gb|CO169436.1|CO169436 NDL1_7_C03.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_C03_A029 3', mRNA sequence
Length = 795
Score = 135 bits (289), Expect = 4e-031
Identities = 52/107 (48%), Positives = 69/107 (64%)
Frame = +3 / -2
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 323 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 144
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAID 323
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L A++
Sbjct: 143 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVN 3
>gb|DR019869.1|DR019869 STRS1_33_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_33_B04_A034 3', mRNA sequence
Length = 868
Score = 78.0 bits (164), Expect(3) = 1e-030
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +3 / +2
Query: 90 RNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNL 242
+NG+ IG +A+S WLYI P G+ +NY+K +Y NP + ITENGMD P N+
Sbjct: 269 KNGRAIGDKASSAWLYIVPHGIRSLMNYIKRRYNNPPVIITENGMDDPNNI 421
Score = 67.5 bits (141), Expect(3) = 1e-030
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +3 / +2
Query: 321 DQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
+ G NV GYF WSLLDN+EW AGY+S+FG+ +VD+
Sbjct: 509 EDGCNVGGYFVWSLLDNWEWAAGYTSRFGLYFVDY 613
Score = 25.8 bits (50), Expect(3) = 1e-030
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 426 NTLERHPKASAYWFRDML 479
+ L R+PKAS WF+ L
Sbjct: 617 HNLTRYPKASVQWFKCFL 670
>gb|CO164776.1|CO164776 FLD1_50_F04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_F04_A029 3', mRNA sequence
Length = 751
Score = 78.0 bits (164), Expect(3) = 1e-030
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +3 / +1
Query: 90 RNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNL 242
+NG+ IG +A+S WLYI P G+ +NY+K +Y NP + ITENGMD P N+
Sbjct: 151 KNGRAIGDKASSAWLYIVPHGIRSLMNYIKRRYNNPPVIITENGMDDPNNI 303
Score = 67.5 bits (141), Expect(3) = 1e-030
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +3 / +1
Query: 321 DQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
+ G NV GYF WSLLDN+EW AGY+S+FG+ +VD+
Sbjct: 391 EDGCNVGGYFVWSLLDNWEWAAGYTSRFGLYFVDY 495
Score = 25.8 bits (50), Expect(3) = 1e-030
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 426 NTLERHPKASAYWFRDML 479
+ L R+PKAS WF+ L
Sbjct: 499 HNLTRYPKASVQWFKCFL 552
>gb|DR094032.1|DR094032 STRR1_12_B03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_B03_A033 3', mRNA sequence
Length = 910
Score = 133 bits (284), Expect = 2e-030
Identities = 51/102 (50%), Positives = 66/102 (64%)
Frame = +3 / -2
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+ YM K + + Y DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE
Sbjct: 312 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKE 133
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQL 308
YGNPT+ ++ENGMD PGN+T L D RV +Y+SY+ L
Sbjct: 132 HYGNPTMILSENGMDDPGNVTLPAGLNDTIRVNYYKSYLQNL 7
>gb|CO162557.1|CO162557 FLD1_36_C02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_36_C02_A029 3', mRNA sequence
Length = 649
Score = 71.6 bits (150), Expect(3) = 6e-028
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +3 / +2
Query: 90 RNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNL 242
++GK IG +A+S WLYI P G+ +NY+K++Y NP + ITENGMD ++
Sbjct: 8 KDGKAIGDKASSIWLYIVPQGIRSLMNYIKQRYNNPPVIITENGMDDSNDI 160
Score = 67.5 bits (141), Expect(3) = 6e-028
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +3 / +2
Query: 321 DQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
+ G NV GYF WSLLDN+EW AGY+S+FG+ +VD+
Sbjct: 248 EDGCNVGGYFVWSLLDNWEWAAGYTSRFGLYFVDY 352
Score = 23.1 bits (44), Expect(3) = 6e-028
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3 / +2
Query: 426 NTLERHPKASAYWFRDML 479
+ L R+PK S WF+ L
Sbjct: 356 HNLTRYPKDSVQWFKCFL 409
>gb|DR080921.1|DR080921 RTFEPL1_26_D08.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_26_D08_A029 3', mRNA sequence
Length = 707
Score = 80.3 bits (169), Expect(3) = 1e-027
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +3 / +2
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T + L D R+RF+ + L AI G++V GYF WSLLDNFEW GY+ +FG+ +VD
Sbjct: 242 TLQENLNDVRRIRFHGDCLSYLNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 421
Query: 423 F 425
F
Sbjct: 422 F 424
Score = 51.9 bits (107), Expect(3) = 1e-027
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +3 / +2
Query: 63 DWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
D +V R+G IG + L++ P G+ V Y+KE Y NPTI ITENG
Sbjct: 56 DSRVYLTGERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 214
Score = 29.0 bits (57), Expect(3) = 1e-027
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 435 ERHPKASAYWFRDMLQ 482
+R+PK SA WFR LQ
Sbjct: 437 KRYPKLSAQWFRQFLQ 484
>gb|DR014803.1|DR014803 HEAT1_51_E12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_E12_A029 5', mRNA sequence
Length = 858
Score = 79.9 bits (168), Expect(3) = 2e-027
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +3 / -3
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T + L D R+RF+ + L AI G++V GYF WSLLDNFEW GY+ +FG+ +VD
Sbjct: 583 TLQENLNDVRRIRFHGDCLSYLTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 404
Query: 423 F 425
F
Sbjct: 403 F 401
Score = 51.9 bits (107), Expect(3) = 2e-027
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +3 / -3
Query: 63 DWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
D +V R+G IG + L++ P G+ V Y+KE Y NPTI ITENG
Sbjct: 769 DSRVYLTGERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 611
Score = 29.0 bits (57), Expect(3) = 2e-027
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / -3
Query: 435 ERHPKASAYWFRDMLQ 482
+R+PK SA WFR LQ
Sbjct: 388 KRYPKLSAQWFRQFLQ 341
>gb|CX712929.1|CX712929 RTPQ1_5_F12.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_5_F12_A032 5', mRNA sequence
Length = 836
Score = 79.9 bits (168), Expect(3) = 2e-027
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +3 / +3
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T + L D R+RF+ + L AI G++V GYF WSLLDNFEW GY+ +FG+ +VD
Sbjct: 399 TLQENLNDVRRIRFHGDCLSYLTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 578
Query: 423 F 425
F
Sbjct: 579 F 581
Score = 51.9 bits (107), Expect(3) = 2e-027
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +3 / +3
Query: 63 DWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
D +V R+G IG + L++ P G+ V Y+KE Y NPTI ITENG
Sbjct: 213 DSRVYLTGERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 371
Score = 29.0 bits (57), Expect(3) = 2e-027
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +3
Query: 435 ERHPKASAYWFRDMLQ 482
+R+PK SA WFR LQ
Sbjct: 594 KRYPKLSAQWFRQFLQ 641
>gb|CO162371.1|CO162371 FLD1_34_H05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_34_H05_A029 5', mRNA sequence
Length = 738
Score = 80.3 bits (169), Expect(3) = 2e-027
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +3 / -3
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T + L D R+RF+ + L AI G++V GYF WSLLDNFEW GY+ +FG+ +VD
Sbjct: 571 TLQENLNDVRRIRFHGDCLSYLNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 392
Query: 423 F 425
F
Sbjct: 391 F 389
Score = 51.0 bits (105), Expect(3) = 2e-027
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3 / -3
Query: 90 RNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
R+G IG + L++ P G+ V Y+KE Y NPTI ITENG
Sbjct: 730 RHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 599
Score = 29.0 bits (57), Expect(3) = 2e-027
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / -3
Query: 435 ERHPKASAYWFRDMLQ 482
+R+PK SA WFR LQ
Sbjct: 376 KRYPKLSAQWFRQFLQ 329
>gb|AF072736.1|AF072736 Pinus contorta beta-glucosidase mRNA, complete cds
Length = 1909
Score = 80.3 bits (169), Expect(3) = 5e-027
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +3 / +3
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T + L D R+RF+ + L AI G++V GYF WSLLDNFEW GY+ +FG+ +VD
Sbjct: 1440 TLQENLNDVRRIRFHGDCLSYLSAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 1619
Query: 423 F 425
F
Sbjct: 1620 F 1622
Score = 49.6 bits (102), Expect(3) = 5e-027
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +3 / +3
Query: 63 DWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
D +V R+G IG + L++ P G+ V Y+KE Y NPTI I ENG
Sbjct: 1254 DSRVYLTGERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIIAENG 1412
Score = 29.0 bits (57), Expect(3) = 5e-027
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +3
Query: 435 ERHPKASAYWFRDMLQ 482
+R+PK SA WFR LQ
Sbjct: 1635 KRYPKLSAQWFRQFLQ 1682
>gb|CO361958.1|CO361958 NDL2_8_E08.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_E08_A029 3', mRNA sequence
Length = 786
Score = 82.6 bits (174), Expect(3) = 1e-026
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = +3 / +2
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
G +Q L D+ RV ++ ++ +L +AI +GA++ GY WSLLDNFEW GY+ +FG+
Sbjct: 257 GKTPLEQALNDSRRVMYHSEHLSELLEAISEGADIRGYLVWSLLDNFEWSFGYTYRFGLY 436
Query: 414 YVDF 425
YVD+
Sbjct: 437 YVDY 448
Score = 43.7 bits (89), Expect(3) = 1e-026
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +3 / +2
Query: 63 DWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
D Q + +G IG P G+ +NY K +Y NPTIY+TE G
Sbjct: 80 DAQANISYEVDGVYIGSVEGVSTYRSYPAGLKDIINYTKHRYNNPTIYVTETG 238
Score = 31.3 bits (62), Expect(3) = 1e-026
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = +3 / +2
Query: 426 NTLERHPKASAYWFRDMLQK 485
+ L+R+P+ASA WFR++L++
Sbjct: 452 DNLKRYPRASANWFRNILKQ 511
>gb|BX250956.1|BX250956 BX250956 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP043D06, mRNA sequence
Length = 675
Score = 79.9 bits (168), Expect(3) = 2e-026
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +3 / +2
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T + L D R+RF+ + L AI G++V GYF WSLLDNFEW GY+ +FG+ +VD
Sbjct: 284 TLQENLSDVRRIRFHGDCLSYLTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 463
Query: 423 FNTLER 440
F + ++
Sbjct: 464 FISAQK 481
Score = 48.3 bits (99), Expect(3) = 2e-026
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +3 / +2
Query: 63 DWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
D +V R+G IG + L++ P G+ V Y+KE Y NP I ITENG
Sbjct: 98 DSRVYLTGERHGVSIGERTAMDGLFVVPHGIQKIVEYVKEFYDNPIIIITENG 256
Score = 29.0 bits (57), Expect(3) = 2e-026
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 435 ERHPKASAYWFRDMLQ 482
+R+PK SA WFR LQ
Sbjct: 479 KRYPKLSAQWFRQFLQ 526
>gb|AW042637.1|AW042637 ST24C01 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST24C01, mRNA sequence
Length = 567
Score = 77.6 bits (163), Expect(3) = 2e-026
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +3 / +3
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T + L D R+RF+ + L AI G++V GYF WSLLDNFEW GY+ +FG+ +V
Sbjct: 273 TLQENLNDVRRIRFHGDCLSYLNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVG 452
Query: 423 FN 428
F+
Sbjct: 453 FH 458
Score = 51.9 bits (107), Expect(3) = 2e-026
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +3 / +3
Query: 63 DWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
D +V R+G IG + L++ P G+ V Y+KE Y NPTI ITENG
Sbjct: 87 DSRVYLTGERHGVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 245
Score = 27.6 bits (54), Expect(3) = 2e-026
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / +1
Query: 435 ERHPKASAYWFRDMLQ 482
+R+PK SA WF+ LQ
Sbjct: 469 KRYPKLSAQWFKQFLQ 516
>gb|CF668848.1|CF668848 RTCNT1_39_C01.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_39_C01_A029 3', mRNA sequence
Length = 737
Score = 80.3 bits (169), Expect(3) = 3e-026
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +3 / +1
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T + L D R+RF+ + L AI G++V GYF WSLLDNFEW GY+ +FG+ +VD
Sbjct: 145 TLQENLNDVRRIRFHGDCLSYLNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 324
Query: 423 F 425
F
Sbjct: 325 F 327
Score = 46.9 bits (96), Expect(3) = 3e-026
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 105 IGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
IG + L++ P G+ V Y+KE Y NPTI ITENG
Sbjct: 1 IGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENG 117
Score = 29.0 bits (57), Expect(3) = 3e-026
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +1
Query: 435 ERHPKASAYWFRDMLQ 482
+R+PK SA WFR LQ
Sbjct: 340 KRYPKLSAQWFRQFLQ 387
>gb|CX646974.1|CX646974 COLD1_12_D12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_12_D12_A029 5', mRNA sequence
Length = 794
Score = 68.4 bits (143), Expect(3) = 5e-026
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +3 / +1
Query: 321 DQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
D G V GYFAWSLLDN+EW AGY+S+FG+ +VD+
Sbjct: 226 DDGCKVGGYFAWSLLDNWEWAAGYTSRFGLYFVDY 330
Score = 59.3 bits (123), Expect(3) = 5e-026
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +3 / +1
Query: 105 IGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNL 242
IG +A S WLY G+ +NY+K++Y NP + ITENGMD N+
Sbjct: 1 IGDKAASAWLYPFSHGIRSLMNYIKQRYNNPPVIITENGMDDSNNI 138
Score = 28.1 bits (55), Expect(3) = 5e-026
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 426 NTLERHPKASAYWFRDML 479
+ L RHPKAS WF+ L
Sbjct: 334 HNLTRHPKASVKWFKCFL 387
>gb|DR095084.1|DR095084 STRR1_18_E04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_18_E04_A033 5', mRNA sequence
Length = 813
Score = 79.9 bits (168), Expect(3) = 6e-026
Identities = 27/59 (45%), Positives = 43/59 (72%)
Frame = +3 / +1
Query: 249 DQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
D+ L D R+ + ++ + +AI +GA+V G+FAWSL+DNFEW GY+S+FG +Y+D+
Sbjct: 478 DEALNDTWRINYCSEHLHYILQAIREGADVRGFFAWSLMDNFEWGFGYTSRFGFIYIDY 654
Score = 46.9 bits (96), Expect(3) = 6e-026
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3 / +1
Query: 123 SKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
S WLY+ G+ + Y+K++Y NP I+ITENG++
Sbjct: 340 SFWLYVYAPGLRDLLIYIKQRYNNPPIFITENGVN 444
Score = 28.6 bits (56), Expect(3) = 6e-026
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3 / +1
Query: 432 LERHPKASAYWFRDML 479
L+R+PKASA+W++ L
Sbjct: 664 LKRYPKASAHWYKRFL 711
>gb|CX652916.1|CX652916 COLD1_62_F11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_F11_A029 3', mRNA sequence
Length = 805
Score = 79.9 bits (168), Expect(3) = 6e-026
Identities = 27/59 (45%), Positives = 43/59 (72%)
Frame = +3 / +3
Query: 249 DQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
D+ L D R+ + ++ + +AI +GA+V G+FAWSL+DNFEW GY+S+FG +Y+D+
Sbjct: 213 DEALNDTWRINYCSEHLHYILQAIREGADVRGFFAWSLMDNFEWGFGYTSRFGFIYIDY 389
Score = 46.9 bits (96), Expect(3) = 6e-026
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3 / +3
Query: 123 SKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
S WLY+ G+ + Y+K++Y NP I+ITENG++
Sbjct: 75 SFWLYVYAPGLRDLLIYIKQRYNNPPIFITENGVN 179
Score = 28.6 bits (56), Expect(3) = 6e-026
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 432 LERHPKASAYWFRDML 479
L+R+PKASA+W++ L
Sbjct: 399 LKRYPKASAHWYKRFL 446
>gb|AW010487.1|AW010487 ST07D06 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST07D06, mRNA sequence
Length = 811
Score = 92.3 bits (195), Expect(3) = 4e-025
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = +3 / +1
Query: 96 GKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLT 245
G PIGP+ANS WLYI P G+Y V Y+KE YGNPT+ ++ENGMD PGN+T
Sbjct: 277 GVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDDPGNVT 426
Score = 31.3 bits (62), Expect(3) = 4e-025
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3 / +2
Query: 327 GANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
G GY LL FEW + Y + G+ YV F
Sbjct: 512 GKMWVGYLHGPLLGKFEWESRYXPRVGVGYVGF 610
Score = 29.0 bits (57), Expect(3) = 4e-025
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3 / +3
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNG 98
T+ YM K + + Y DW + +ARNG
Sbjct: 183 TAYYMYDPKQPKQNVTDYQMDWNTGFAYARNG 278
>gb|BX254352.1|BX254352 BX254352 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP097C12, mRNA sequence
Length = 664
Score = 64.3 bits (134), Expect(3) = 1e-024
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +3 / +2
Query: 60 ADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGN 239
AD V R G IG + S+WLY+ P G+ + Y+K++Y NP I ITENG+D P +
Sbjct: 68 ADSAVITTSFRKGVMIGERGASRWLYVVPWGIRSSMIYIKQRYDNPPIIITENGIDDPNS 247
Score = 57.4 bits (119), Expect(3) = 1e-024
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +3 / +2
Query: 321 DQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
+ G +V GYF WSLLDN+EW +G++ +FG+ +VD+
Sbjct: 338 NDGCDVRGYFVWSLLDNWEWNSGFTVRFGLYFVDY 442
Score = 29.5 bits (58), Expect(3) = 1e-024
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3 / +2
Query: 432 LERHPKASAYWFRDMLQK 485
L R+PKASA WF+ L K
Sbjct: 452 LTRYPKASADWFKSFLPK 505
>gb|BX679902.1|BX679902 BX679902 RS Pinus pinaster cDNA clone RS35H05, mRNA sequence
Length = 578
Score = 79.4 bits (167), Expect(3) = 3e-024
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +3 / +2
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T + L D R+RF+ + L AI G++V GYF WSLLDNFEW GY+ +FG+ +VD
Sbjct: 143 TLQENLSDVRRIRFHGDCLSYLTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVD 322
Query: 423 F 425
F
Sbjct: 323 F 325
Score = 41.4 bits (84), Expect(3) = 3e-024
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3 / +2
Query: 132 LYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
L++ P G+ V Y+KE Y NP I ITENG
Sbjct: 26 LFVVPHGIQKIVEYVKEFYDNPIIIITENG 115
Score = 29.0 bits (57), Expect(3) = 3e-024
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 435 ERHPKASAYWFRDMLQ 482
+R+PK SA WFR LQ
Sbjct: 338 KRYPKLSAQWFRQFLQ 385
>gb|DR013536.1|DR013536 HEAT1_19_H11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_19_H11_A029 5', mRNA sequence
Length = 729
Score = 72.1 bits (151), Expect(3) = 1e-023
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = +3 / -2
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
G + L D+ R++++ ++ L + I +GA+V GY WSL+D+FEW +GY+ +FG+
Sbjct: 482 GTTPLQRALNDSGRLKYHSEHLSHLLQGIKEGADVRGYIIWSLMDSFEWSSGYNYRFGLY 303
Query: 414 YVDF 425
+VD+
Sbjct: 302 HVDY 291
Score = 45.5 bits (93), Expect(3) = 1e-023
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = +3 / -2
Query: 93 NGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
NG IG P G+ G +NY K +Y NP IYITE G
Sbjct: 629 NGVYIGSDEGVSDFRSYPAGLRGVINYTKHRYNNPPIYITETG 501
Score = 29.9 bits (59), Expect(3) = 1e-023
Identities = 8/20 (40%), Positives = 18/20 (90%)
Frame = +3 / -2
Query: 426 NTLERHPKASAYWFRDMLQK 485
+ L+R+P++SA+WF+ +L++
Sbjct: 287 DNLKRYPRSSAHWFKHILRR 228
>gb|CO199421.1|CO199421 GEO2_1_C06.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_1_C06_A032 3', mRNA sequence
Length = 870
Score = 74.8 bits (157), Expect(3) = 2e-023
Identities = 25/64 (39%), Positives = 45/64 (70%)
Frame = +3 / +3
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
G + L D+ R++++ ++ L ++I +GA+V GY AWSL+D+FEW +GY+ +FG+
Sbjct: 339 GTTPLQRALNDSGRLKYHSEHLSHLLQSIKEGADVRGYIAWSLMDSFEWSSGYNYRFGLY 518
Query: 414 YVDF 425
+VD+
Sbjct: 519 HVDY 530
Score = 42.3 bits (86), Expect(3) = 2e-023
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3 / +3
Query: 93 NGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
NG IG P G+ +NY K +Y NP IYITE G
Sbjct: 192 NGVYIGSDEGVSDFRSYPAGLRDVINYTKHRYNNPPIYITETG 320
Score = 29.9 bits (59), Expect(3) = 2e-023
Identities = 8/20 (40%), Positives = 18/20 (90%)
Frame = +3 / +3
Query: 426 NTLERHPKASAYWFRDMLQK 485
+ L+R+P++SA+WF+ +L++
Sbjct: 534 DNLKRYPRSSAHWFKHILRR 593
>gb|CO369254.1|CO369254 RTK1_46_A07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_46_A07_A029 3', mRNA sequence
Length = 811
Score = 72.1 bits (151), Expect(3) = 2e-023
Identities = 25/65 (38%), Positives = 43/65 (66%)
Frame = +3 / +2
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
G + + + D RV+++ ++ L++AI G++V GY WSL+D+FEW G++ +FG+
Sbjct: 485 GTTSLARAVNDPGRVKYHYQHLSHLREAIRAGSDVRGYLVWSLMDDFEWSFGFTYRFGLY 664
Query: 414 YVDFN 428
YVD N
Sbjct: 665 YVDLN 679
Score = 46.9 bits (96), Expect(3) = 2e-023
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +3 / +2
Query: 39 LAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITEN 218
L + Y D + + NG IG P G+ +NY K +Y NPT+YITE
Sbjct: 284 LLHTDYILDARANVTYEVNGVFIGSTEGDNDFRSYPAGLSELLNYTKNRYNNPTVYITET 463
Query: 219 G 221
G
Sbjct: 464 G 466
Score = 28.1 bits (55), Expect(3) = 2e-023
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L+R+ +ASA WF+ +LQ
Sbjct: 680 NHLKRYARASALWFKRILQ 736
>gb|CO369338.1|CO369338 RTK1_46_A07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_46_A07_A029 5', mRNA sequence
Length = 805
Score = 72.1 bits (151), Expect(3) = 2e-023
Identities = 25/65 (38%), Positives = 43/65 (66%)
Frame = +3 / +1
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
G + + + D RV+++ ++ L++AI G++V GY WSL+D+FEW G++ +FG+
Sbjct: 475 GTTSLARAVNDPGRVKYHYQHLSHLREAIRAGSDVRGYLVWSLMDDFEWSFGFTYRFGLY 654
Query: 414 YVDFN 428
YVD N
Sbjct: 655 YVDLN 669
Score = 46.9 bits (96), Expect(3) = 2e-023
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +3 / +1
Query: 39 LAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITEN 218
L + Y D + + NG IG P G+ +NY K +Y NPT+YITE
Sbjct: 274 LLHTDYILDARANVTYEVNGVFIGSTEGDNDFRSYPAGLSELLNYTKNRYNNPTVYITET 453
Query: 219 G 221
G
Sbjct: 454 G 456
Score = 28.1 bits (55), Expect(3) = 2e-023
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L+R+ +ASA WF+ +LQ
Sbjct: 670 NHLKRYARASALWFKRILQ 726
>gb|DR744663.1|DR744663 RTCU1_24_B09.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_24_B09_A029 3', mRNA sequence
Length = 727
Score = 72.5 bits (152), Expect(3) = 3e-023
Identities = 24/64 (37%), Positives = 44/64 (68%)
Frame = +3 / +1
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
G + L D+ R++++ ++ L ++I +GA+V GY WSL+D+FEW +GY+ +FG+
Sbjct: 253 GTTPLQRALNDSGRLKYHSEHLSHLLQSIKEGADVRGYIIWSLMDSFEWSSGYNYRFGLY 432
Query: 414 YVDF 425
+VD+
Sbjct: 433 HVDY 444
Score = 43.7 bits (89), Expect(3) = 3e-023
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3 / +1
Query: 93 NGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
NG IG P G+ +NY+K +Y NP IYITE G
Sbjct: 106 NGVYIGSDEGVSDFRSYPAGLRDVINYIKHRYNNPPIYITETG 234
Score = 29.9 bits (59), Expect(3) = 3e-023
Identities = 8/20 (40%), Positives = 18/20 (90%)
Frame = +3 / +1
Query: 426 NTLERHPKASAYWFRDMLQK 485
+ L+R+P++SA+WF+ +L++
Sbjct: 448 DNLKRYPRSSAHWFKHILRR 507
>gb|CF390062.1|CF390062 RTDR2_12_E07.b1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_12_E07_A021 3', mRNA
sequence
Length = 587
Score = 70.7 bits (148), Expect(3) = 4e-023
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +3 / +2
Query: 249 DQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
D+ L D R+ F ++ + +AI +G+++ G++AWSL+DNFEW GY FG Y+D+
Sbjct: 272 DEALNDTGRISFCSEHLWYILEAIREGSDIRGFYAWSLMDNFEWSLGYEC*FGFHYIDY 448
Score = 45.1 bits (92), Expect(3) = 4e-023
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3 / +2
Query: 123 SKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQP 233
S +LY+ G+ + Y+K +Y NP I+ITENG++ P
Sbjct: 134 SDYLYVYAPGIKDLLIYIKHQYNNPPIFITENGVNDP 244
Score = 29.9 bits (59), Expect(3) = 4e-023
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = +3 / +2
Query: 432 LERHPKASAYWFRDML 479
L+R+PKASA+W++ +L
Sbjct: 458 LKRYPKASAHWYKKLL 505
>gb|DR020312.1|DR020312 STRS1_36_C01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_36_C01_A034 3', mRNA sequence
Length = 903
Score = 77.6 bits (163), Expect(3) = 8e-023
Identities = 28/65 (43%), Positives = 46/65 (70%)
Frame = +3 / +1
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
G ++ L D+ RV+++ ++ L +AI +GA+V GY AWSLLD+ EW +GY+ +FG+
Sbjct: 448 GTTPLERALNDSKRVKYHYEHLSSLLQAIREGADVRGYVAWSLLDSLEWSSGYNYRFGLH 627
Query: 414 YVDFN 428
YVD++
Sbjct: 628 YVDYH 642
Score = 41.8 bits (85), Expect(3) = 8e-023
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3 / +1
Query: 48 SSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
+ Y D + + NG IG P G+ ++Y K +Y NP IYITE+G
Sbjct: 256 TDYILDARAIVTYEVNGVYIGSAEGLSEFRSYPAGLRDVISYTKHRYDNPPIYITESG 429
Score = 25.4 bits (49), Expect(3) = 8e-023
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 426 NTLERHPKASAYWFRDMLQ 482
+ L+R+ +ASA WF+ +L+
Sbjct: 643 DNLKRYARASAQWFKTILR 699
>gb|CF390726.1|CF390726 RTDR2_17_D05.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_17_D05_A021 5', mRNA
sequence
Length = 796
Score = 83.1 bits (175), Expect(2) = 8e-023
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = +3 / +2
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
G ++ L D+ RV ++ ++ L +AI +GA+V GY WSLLDNFEW +GY +FG+
Sbjct: 302 GTTRLEEALHDSRRVEYHSQHLSYLLEAIREGADVRGYVVWSLLDNFEWASGYDYRFGLY 481
Query: 414 YVDFN 428
Y+D+N
Sbjct: 482 YIDYN 496
Score = 44.1 bits (90), Expect(2) = 8e-023
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3 / +2
Query: 48 SSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
+ Y D + + NG +G P G+ +NY K +Y NP IYITE G
Sbjct: 110 TDYVLDARANISYEVNGVYLGSDEGVSAFRSYPAGLRDVINYTKHRYNNPPIYITETG 283
>gb|CO158951.1|CO158951 FLD1_10_G08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_10_G08_A029 3', mRNA sequence
Length = 716
Score = 107 bits (229), Expect = 8e-023
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +3 / -1
Query: 264 DATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERH 443
D TR+ F Y+ ++ KA+ GAN+ GYF WS LDNFEW GYS +FG+++VD+ T +R
Sbjct: 326 DTTRINFIHDYLVEIHKAMRNGANLRGYFYWSFLDNFEWAFGYSKRFGLIHVDYRTHKRT 147
Query: 444 PKASAYWF 467
PKASAYWF
Sbjct: 146 PKASAYWF 123
>gb|CO158039.1|CO158039 FLD1_4_C03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_4_C03_A029 3', mRNA sequence
Length = 548
Score = 79.9 bits (168), Expect(3) = 1e-022
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = +3 / +2
Query: 258 LRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
L+D+ RV+++ ++ L KAI +GA+V GY W+LLDNFEW GY+ +FG+ YVD+
Sbjct: 224 LQDSKRVKYHYQHLSNLLKAIREGADVRGYIVWALLDNFEWFNGYNVRFGLNYVDY 391
Score = 33.6 bits (67), Expect(3) = 1e-022
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +3 / +1
Query: 48 SSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNP 197
+ Y D + F NG IG P G+ +NY K +Y NP
Sbjct: 7 TDYFLDARANVTFEINGDVIGSNEGISAFRSYPKGIRDVINYTKHRYNNP 156
Score = 30.9 bits (61), Expect(3) = 1e-022
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 426 NTLERHPKASAYWFRDMLQ 482
+ L+R+ KASAYWF+ +L+
Sbjct: 395 HNLKRYAKASAYWFKHLLR 451
>dbj|BD224353.1| Materials and methods for the modification of plant lignin content
Length = 451
Score = 97.3 bits (206), Expect(2) = 1e-022
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +3 / +3
Query: 63 DWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE YGNPT+ ++ENGMD
Sbjct: 183 DWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMD 347
Score = 29.5 bits (58), Expect(2) = 1e-022
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3 / +2
Query: 228 QPGNLTRDQYLRDATRVRFYRSYIGQLKKA 317
+PGN+T L D R +Y+SY+ L A
Sbjct: 347 RPGNVTLPAGLHDTIRGNYYKSYLQNLINA 436
>dbj|BD224416.1| Materials and methods for the modification of plant lignin content
Length = 437
Score = 97.3 bits (206), Expect(2) = 1e-022
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +3 / +1
Query: 63 DWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
DW + +ARNG PIGP+ANS WLYI P G+Y V Y+KE YGNPT+ ++ENGMD
Sbjct: 169 DWNTGFAYARNGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMD 333
Score = 29.5 bits (58), Expect(2) = 1e-022
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3 / +3
Query: 228 QPGNLTRDQYLRDATRVRFYRSYIGQLKKA 317
+PGN+T L D R +Y+SY+ L A
Sbjct: 333 RPGNVTLPAGLHDTIRGNYYKSYLQNLINA 422
>gb|DR385366.1|DR385366 RTHG1_8_F01.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_F01_A029 3', mRNA sequence
Length = 558
Score = 72.1 bits (151), Expect(3) = 1e-022
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = +3 / +2
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
G + L D+ R++++ ++ L + I +GA+V GY WSL+D+FEW +GY+ +FG+
Sbjct: 131 GTTPLQRALNDSGRLKYHSEHLSHLLQGIKEGADVRGYIIWSLMDSFEWSSGYNYRFGLY 310
Query: 414 YVDF 425
+VD+
Sbjct: 311 HVDY 322
Score = 41.8 bits (85), Expect(3) = 1e-022
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3 / +2
Query: 144 PTGMYGCVNYLKEKYGNPTIYITENG 221
P G+ G +NY K +Y +P IYITE G
Sbjct: 35 PAGLRGVINYTKHRYNDPPIYITETG 112
Score = 29.9 bits (59), Expect(3) = 1e-022
Identities = 8/20 (40%), Positives = 18/20 (90%)
Frame = +3 / +2
Query: 426 NTLERHPKASAYWFRDMLQK 485
+ L+R+P++SA+WF+ +L++
Sbjct: 326 DNLKRYPRSSAHWFKHILRR 385
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 483,914,025
Number of Sequences: 355925
Number of extensions: 7845482
Number of successful extensions: 56539
Number of sequences better than 1.0e-020: 64
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 11646211320
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)