TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805202.2.1
(1139 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX253213.1|BX253213 BX253213 Pinus pinaster differenciat... 189 3e-047
gb|CF672623.1|CF672623 RTCNT1_64_H05.g1_A029 Root control P... 189 3e-047
gb|CO160201.1|CO160201 FLD1_19_A03.g1_A029 Root flooded Pin... 189 3e-047
gb|CV035712.1|CV035712 RTNACL1_42_A06.b1_A029 Roots plus ad... 189 3e-047
gb|CV035788.1|CV035788 RTNACL1_42_A06.g1_A029 Roots plus ad... 189 3e-047
gb|DN609369.1|DN609369 EST962419 Subtracted pine embryo lib... 189 3e-047
gb|DR012508.1|DR012508 HEAT1_13_G02.b1_A029 Root at 37 C fo... 189 3e-047
gb|DR014767.1|DR014767 HEAT1_51_B06.g1_A029 Root at 37 C fo... 189 3e-047
gb|DR017755.1|DR017755 STRS1_18_G04.b1_A034 Shoot tip pitch... 189 3e-047
gb|DR017840.1|DR017840 STRS1_18_G04.g1_A034 Shoot tip pitch... 189 3e-047
gb|DR055871.1|DR055871 RTCA1_26_B02.g1_A029 Roots minus cal... 189 3e-047
gb|DR058721.1|DR058721 RTNIT1_13_B05.g1_A029 Roots minus ni... 189 3e-047
gb|DR089794.1|DR089794 RTAL1_10_G10.g1_A029 Roots plus adde... 189 3e-047
gb|DR091888.1|DR091888 RTAL1_24_D06.g1_A029 Roots plus adde... 189 3e-047
gb|DR385882.1|DR385882 RTHG1_11_A07.g1_A029 Roots plus adde... 189 3e-047
gb|DR682838.1|DR682838 EST1072913 Normalized pine embryo li... 189 3e-047
gb|DR683008.1|DR683008 EST1073083 Normalized pine embryo li... 189 3e-047
gb|DR683009.1|DR683009 EST1073084 Normalized pine embryo li... 189 3e-047
gb|DR688845.1|DR688845 EST1078931 Normalized pine embryo li... 189 3e-047
gb|DR694166.1|DR694166 EST1084256 Normalized pine embryo li... 189 3e-047
gb|DT627731.1|DT627731 EST1156480 Subtracted pine embryo li... 189 3e-047
gb|DT631560.1|DT631560 EST1146491 Normalized pine embryo li... 189 3e-047
gb|BE187297.1|BE187297 NXNV_162_B12_F Nsf Xylem Normal wood... 186 2e-046
gb|BQ699182.1|BQ699182 NXRV120_E07_F NXRV (Nsf Xylem Root w... 185 4e-046
gb|BQ107356.1|BQ107356 NXLV092_F12_F NXLV (Nsf Xylem Late w... 185 6e-046
gb|CO160128.1|CO160128 FLD1_19_A03.b1_A029 Root flooded Pin... 184 8e-046
gb|AW011230.1|AW011230 ST18C07 Pine TriplEx shoot tip libra... 179 3e-044
gb|CF672548.1|CF672548 RTCNT1_64_H05.b1_A029 Root control P... 177 1e-043
gb|AW064721.1|AW064721 ST35A02 Pine TriplEx shoot tip libra... 174 9e-043
gb|BG039422.1|BG039422 NXSI_098_H06_F NXSI (Nsf Xylem Side ... 168 5e-041
gb|DR014618.1|DR014618 HEAT1_50_C10.g1_A029 Root at 37 C fo... 168 8e-041
gb|DR089709.1|DR089709 RTAL1_10_G10.b1_A029 Roots plus adde... 164 1e-039
gb|CX645893.1|CX645893 COLD1_5_H12.g1_A029 Root cold Pinus ... 157 2e-037
gb|CO367704.1|CO367704 RTK1_36_B04.b1_A029 Roots minus pota... 149 2e-035
gb|CX712484.1|CX712484 RTPQ1_2_G01.g2_A032 Roots treated wi... 149 2e-035
gb|DR744595.1|DR744595 RTCU1_23_C03.g1_A029 Roots plus adde... 149 3e-035
gb|BX253625.1|BX253625 BX253625 Pinus pinaster differenciat... 148 9e-035
gb|CF475707.1|CF475707 RTWW2_11_G10.g1_A021 Well-watered lo... 147 2e-034
gb|CO199374.1|CO199374 GEO1_20_F02.g1_A029 Root gravitropis... 143 3e-033
gb|DR058638.1|DR058638 RTNIT1_13_B05.b1_A029 Roots minus ni... 142 4e-033
gb|DR682839.1|DR682839 EST1072914 Normalized pine embryo li... 140 1e-032
gb|DN632101.1|DN632101 EST982917 Subtracted pine embryo lib... 140 2e-032
gb|DT630456.1|DT630456 EST1154868 Subtracted pine embryo li... 140 2e-032
gb|BX252707.1|BX252707 BX252707 Pinus pinaster differenciat... 138 1e-031
gb|BG318905.1|BG318905 NXPV_021_C11_F NXPV (Nsf Xylem Plani... 137 1e-031
gb|DR012588.1|DR012588 HEAT1_13_G02.g1_A029 Root at 37 C fo... 133 2e-030
gb|DN612978.1|DN612978 EST966028 Subtracted pine embryo lib... 110 2e-023
>gb|BX253213.1|BX253213 BX253213 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP079H01 similar to POLYPOSIS LOCUS PROTEIN,
mRNA sequence
Length = 501
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 69 SFLKTVLYNIDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 248
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 249 RLLEWLPFWPYVKLIATCWLVLPVFNGAAYVYENFVRQMLLN 374
Score = 125 bits (268), Expect = 5e-028
Identities = 60/101 (59%), Positives = 71/101 (70%)
Frame = +2 / -3
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 373 FRSICLTKFSYT*AAPLNTGSTSQQVAISLT*GQNGNHSSSREKESSNSVMNEYRTQYVS 194
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S+L LRK
Sbjct: 193 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSILYKTVLRK 71
>gb|CF672623.1|CF672623 RTCNT1_64_H05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_64_H05_A029 5', mRNA sequence
Length = 729
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 126 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 305
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 306 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 431
Score = 129 bits (276), Expect = 4e-029
Identities = 61/101 (60%), Positives = 71/101 (70%)
Frame = +2 / -3
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 430 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 251
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRGY++ T GPA S L LRK
Sbjct: 250 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRK 128
>gb|CO160201.1|CO160201 FLD1_19_A03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_19_A03_A029 5', mRNA sequence
Length = 750
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 125 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 304
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 305 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 430
Score = 129 bits (276), Expect = 4e-029
Identities = 61/101 (60%), Positives = 71/101 (70%)
Frame = +2 / -1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 429 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 250
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRGY++ T GPA S L LRK
Sbjct: 249 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRK 127
>gb|CV035712.1|CV035712 RTNACL1_42_A06.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_42_A06_A029 3', mRNA sequence
Length = 822
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / -3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 457 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 278
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 277 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 152
Score = 129 bits (276), Expect = 4e-029
Identities = 61/101 (60%), Positives = 71/101 (70%)
Frame = +2 / +3
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 153 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 332
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRGY++ T GPA S L LRK
Sbjct: 333 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRK 455
>gb|CV035788.1|CV035788 RTNACL1_42_A06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_42_A06_A029 5', mRNA sequence
Length = 713
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / -3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 696 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 517
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 516 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 391
Score = 129 bits (276), Expect = 4e-029
Identities = 61/101 (60%), Positives = 71/101 (70%)
Frame = +2 / +2
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 392 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 571
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRGY++ T GPA S L LRK
Sbjct: 572 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRK 694
>gb|DN609369.1|DN609369 EST962419 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAAC05, mRNA sequence
Length = 635
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 279 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 458
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 459 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 584
Score = 129 bits (276), Expect = 4e-029
Identities = 61/101 (60%), Positives = 71/101 (70%)
Frame = +2 / -2
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 583 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 404
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRGY++ T GPA S L LRK
Sbjct: 403 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRK 281
>gb|DR012508.1|DR012508 HEAT1_13_G02.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_13_G02_A029 3', mRNA sequence
Length = 826
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 66 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 245
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 246 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 371
Score = 129 bits (276), Expect = 4e-029
Identities = 61/101 (60%), Positives = 71/101 (70%)
Frame = +2 / -1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 370 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 191
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRGY++ T GPA S L LRK
Sbjct: 190 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRK 68
>gb|DR014767.1|DR014767 HEAT1_51_B06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_B06_A029 5', mRNA sequence
Length = 870
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 213 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 392
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 393 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 518
Score = 129 bits (276), Expect = 4e-029
Identities = 61/101 (60%), Positives = 71/101 (70%)
Frame = +2 / -3
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 517 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 338
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRGY++ T GPA S L LRK
Sbjct: 337 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRK 215
>gb|DR017755.1|DR017755 STRS1_18_G04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_18_G04_A034 3', mRNA sequence
Length = 846
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 104 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 283
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 284 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 409
Score = 124 bits (265), Expect = 1e-027
Identities = 60/101 (59%), Positives = 70/101 (69%)
Frame = +2 / -1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 408 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 229
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 228 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 106
>gb|DR017840.1|DR017840 STRS1_18_G04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_18_G04_A034 5', mRNA sequence
Length = 718
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 230 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 409
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 410 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 535
Score = 124 bits (265), Expect = 1e-027
Identities = 60/101 (59%), Positives = 70/101 (69%)
Frame = +2 / -2
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 534 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 355
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 354 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 232
>gb|DR055871.1|DR055871 RTCA1_26_B02.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_26_B02_A029 5', mRNA sequence
Length = 667
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 76 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 255
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 256 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 381
Score = 129 bits (276), Expect = 4e-029
Identities = 61/101 (60%), Positives = 71/101 (70%)
Frame = +2 / -3
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 380 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 201
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRGY++ T GPA S L LRK
Sbjct: 200 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRK 78
>gb|DR058721.1|DR058721 RTNIT1_13_B05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_B05_A029 5', mRNA sequence
Length = 619
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 261 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 440
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 441 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 566
Score = 129 bits (276), Expect = 4e-029
Identities = 61/101 (60%), Positives = 71/101 (70%)
Frame = +2 / -1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 565 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 386
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRGY++ T GPA S L LRK
Sbjct: 385 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRK 263
>gb|DR089794.1|DR089794 RTAL1_10_G10.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_10_G10_A029 5', mRNA sequence
Length = 665
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 109 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 288
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 289 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 414
Score = 124 bits (265), Expect = 1e-027
Identities = 60/101 (59%), Positives = 70/101 (69%)
Frame = +2 / -1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 413 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 234
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 233 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 111
>gb|DR091888.1|DR091888 RTAL1_24_D06.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_24_D06_A029 5', mRNA sequence
Length = 720
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 175 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 354
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 355 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 480
Score = 124 bits (265), Expect = 1e-027
Identities = 60/101 (59%), Positives = 70/101 (69%)
Frame = +2 / -2
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 479 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 300
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 299 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 177
>gb|DR385882.1|DR385882 RTHG1_11_A07.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_11_A07_A029 5', mRNA sequence
Length = 825
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 180 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 359
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 360 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 485
Score = 129 bits (276), Expect = 4e-029
Identities = 61/101 (60%), Positives = 71/101 (70%)
Frame = +2 / -3
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 484 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 305
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRGY++ T GPA S L LRK
Sbjct: 304 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRK 182
>gb|DR682838.1|DR682838 EST1072913 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAC56, mRNA sequence
Length = 895
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / -1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 778 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 599
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 598 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 473
Score = 124 bits (265), Expect = 1e-027
Identities = 60/101 (59%), Positives = 70/101 (69%)
Frame = +2 / +3
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 474 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 653
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 654 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 776
>gb|DR683008.1|DR683008 EST1073083 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAD72, mRNA sequence
Length = 831
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / -2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 746 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 567
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 566 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 441
Score = 124 bits (265), Expect = 1e-027
Identities = 60/101 (59%), Positives = 70/101 (69%)
Frame = +2 / +1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 442 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 621
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 622 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 744
>gb|DR683009.1|DR683009 EST1073084 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAD72 3' end, mRNA sequence
Length = 687
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 325 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 504
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 505 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 630
Score = 124 bits (265), Expect = 1e-027
Identities = 60/101 (59%), Positives = 70/101 (69%)
Frame = +2 / -2
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 629 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 450
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 449 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 327
>gb|DR688845.1|DR688845 EST1078931 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACB29 3' end, mRNA sequence
Length = 846
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 273 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 452
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 453 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 578
Score = 124 bits (265), Expect = 1e-027
Identities = 60/101 (59%), Positives = 70/101 (69%)
Frame = +2 / -3
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 577 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 398
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 397 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 275
>gb|DR694166.1|DR694166 EST1084256 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE887 3' end, mRNA sequence
Length = 627
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 122 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 301
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 302 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 427
Score = 124 bits (265), Expect = 1e-027
Identities = 60/101 (59%), Positives = 70/101 (69%)
Frame = +2 / -1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 426 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 247
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 246 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 124
>gb|DT627731.1|DT627731 EST1156480 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMCQ04 5' end, mRNA sequence
Length = 638
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / -3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 360 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 181
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 180 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 55
Score = 129 bits (276), Expect = 4e-029
Identities = 61/101 (60%), Positives = 71/101 (70%)
Frame = +2 / +2
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 56 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 235
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRGY++ T GPA S L LRK
Sbjct: 236 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRK 358
>gb|DT631560.1|DT631560 EST1146491 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFA13 3' end, mRNA sequence
Length = 800
Score = 189 bits (407), Expect = 3e-047
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 325 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 504
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 505 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 630
Score = 124 bits (265), Expect = 1e-027
Identities = 60/101 (59%), Positives = 70/101 (69%)
Frame = +2 / -1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 629 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 450
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 449 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 327
>gb|BE187297.1|BE187297 NXNV_162_B12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_162_B12 5' similar to Arabidopsis thaliana
sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 574
Score = 186 bits (401), Expect = 2e-046
Identities = 70/102 (68%), Positives = 87/102 (85%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 33 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 212
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FV M++N
Sbjct: 213 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVXQMLLN 338
Score = 130 bits (278), Expect = 2e-029
Identities = 61/101 (60%), Positives = 71/101 (70%)
Frame = +2 / -1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 337 FRSIXLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 158
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRGY++ T GPA S L LRK
Sbjct: 157 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMSRLYKTALRK 35
>gb|BQ699182.1|BQ699182 NXRV120_E07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV120_E07 5' similar to Arabidopsis thaliana
sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 524
Score = 185 bits (399), Expect = 4e-046
Identities = 70/102 (68%), Positives = 87/102 (85%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L PLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 88 SFLKAVLYNLDIFAGPVVTLLXPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 267
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 268 RLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 393
Score = 125 bits (268), Expect = 5e-028
Identities = 60/101 (59%), Positives = 70/101 (69%)
Frame = +2 / -1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 392 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 213
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 212 HC*SSSRDGLSIALMEEYRGXSNVTTGPANMSRLYKTALRK 90
>gb|BQ107356.1|BQ107356 NXLV092_F12_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV092_F12 5' similar to Arabidopsis thaliana
sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 560
Score = 185 bits (398), Expect = 6e-046
Identities = 70/102 (68%), Positives = 87/102 (85%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 130 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 309
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
+L WLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 310 RLL*WLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 435
Score = 121 bits (259), Expect = 9e-027
Identities = 59/101 (58%), Positives = 69/101 (68%)
Frame = +2 / -1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+H S+ K SSN V+NEY TQYVS
Sbjct: 434 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHYSSREKESSNSVMNEYRTQYVS 255
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
HC*SS+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 254 HC*SSSRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 132
>gb|CO160128.1|CO160128 FLD1_19_A03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_19_A03_A029 3', mRNA sequence
Length = 759
Score = 184 bits (397), Expect = 8e-046
Identities = 69/100 (69%), Positives = 86/100 (86%)
Frame = -3 / +1
Query: 885 LKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPV 706
LK ++ N+D+L GP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+ +
Sbjct: 1 LKAVLYNLDILXGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFSRL 180
Query: 705 LEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
LEWLPFW Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 181 LEWLPFWPYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 300
Score = 122 bits (262), Expect = 3e-027
Identities = 58/99 (58%), Positives = 68/99 (68%)
Frame = +2 / -2
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 299 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 120
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTSMLLTKTL 883
HC*SS+ D +SIAL E YRGY++ T GP S L L
Sbjct: 119 HC*SSSRDGLSIALMEEYRGYSNVTTGPXNMSRLYKTAL 3
>gb|AW011230.1|AW011230 ST18C07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST18C07, mRNA sequence
Length = 533
Score = 179 bits (386), Expect = 3e-044
Identities = 67/101 (66%), Positives = 85/101 (84%)
Frame = -3 / +1
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 220 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 399
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIV 589
+LEWLPFW Y KL CWLVLP FNGA +VYE+ V+ M++
Sbjct: 400 RLLEWLPFWPYLKLIATCWLVLPVFNGAXYVYENXVKXMLL 522
Score = 117 bits (251), Expect = 1e-025
Identities = 56/96 (58%), Positives = 66/96 (68%)
Frame = +2 / -1
Query: 602 LTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*SS 781
LT SYT APLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVSHC*SS
Sbjct: 509 LTXFSYT*XAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVSHC*SS 330
Query: 782 TADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 329 SRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 222
>gb|CF672548.1|CF672548 RTCNT1_64_H05.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_64_H05_A029 3', mRNA sequence
Length = 765
Score = 177 bits (382), Expect = 1e-043
Identities = 66/93 (70%), Positives = 81/93 (87%)
Frame = -3 / +1
Query: 864 MDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFW 685
+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+ +LEWLPFW
Sbjct: 1 LDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFW 180
Query: 684 SYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
Y KL CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 181 PYLKLIATCWLVLPVFNGAAYVYENFVRQMLLN 279
Score = 122 bits (262), Expect = 3e-027
Identities = 57/92 (61%), Positives = 67/92 (72%)
Frame = +2 / -2
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 278 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 99
Query: 767 HC*SSTADFVSIALTEAYRGYASETKGPARTS 862
HC*SS+ D +SIAL E YRGY++ T GPA S
Sbjct: 98 HC*SSSRDGLSIALMEEYRGYSNVTTGPANMS 3
>gb|AW064721.1|AW064721 ST35A02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST35A02, mRNA sequence
Length = 566
Score = 174 bits (375), Expect = 9e-043
Identities = 65/94 (69%), Positives = 80/94 (85%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 258 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 437
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEH 610
+LEWLPFW Y KL CWLVLP FNGA +VYE+
Sbjct: 438 RLLEWLPFWPYLKLIATCWLVLPVFNGATYVYEN 539
Score = 117 bits (251), Expect = 1e-025
Identities = 56/96 (58%), Positives = 66/96 (68%)
Frame = +2 / -2
Query: 602 LTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*SS 781
L K SYT APLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVSHC*SS
Sbjct: 547 LDKFSYT*VAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVSHC*SS 368
Query: 782 TADFVSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
+ D +SIAL E YRG ++ T GPA S L LRK
Sbjct: 367 SRDGLSIALMEEYRG*SNVTTGPANMSRLYKTALRK 260
>gb|BG039422.1|BG039422 NXSI_098_H06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_098_H06 5' similar to Arabidopsis thaliana
sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 553
Score = 168 bits (362), Expect = 5e-041
Identities = 63/92 (68%), Positives = 77/92 (83%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DD QWLTYWVLYSFITLFEL+F+
Sbjct: 276 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDXQWLTYWVLYSFITLFELSFS 455
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVY 616
+L WLPFW Y KL CWLVLP FNGAA+VY
Sbjct: 456 RLLXWLPFWPYLKLIATCWLVLPXFNGAAYVY 551
Score = 117 bits (250), Expect = 2e-025
Identities = 54/92 (58%), Positives = 64/92 (69%)
Frame = +2 / -1
Query: 614 SYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVSHC*SSTADF 793
SYT AAPLN G+T+QQ+ S * Q G+H S+ K SSN V+NEY TQYVSHC SS+ D
Sbjct: 553 SYT*AAPLNXGSTSQQVAISLR*GQNGNHXSSREKESSNSVMNEYRTQYVSHCXSSSRDG 374
Query: 794 VSIALTEAYRGYASETKGPARTSMLLTKTLRK 889
+SIAL E YRGY++ T GPA S L LRK
Sbjct: 373 LSIALMEEYRGYSNVTTGPANMSRLYKTALRK 278
>gb|DR014618.1|DR014618 HEAT1_50_C10.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_50_C10_A029 5', mRNA sequence
Length = 778
Score = 168 bits (361), Expect = 8e-041
Identities = 63/87 (72%), Positives = 76/87 (87%)
Frame = -3 / +3
Query: 846 PLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFWSYAKLF 667
P+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+ +LEWLPFW Y KL
Sbjct: 27 PVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWPYLKLI 206
Query: 666 FNCWLVLPQFNGAAHVYEHFVRPMIVN 586
CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 207 ATCWLVLPVFNGAAYVYENFVRQMLLN 287
Score = 115 bits (245), Expect = 8e-025
Identities = 54/87 (62%), Positives = 63/87 (72%)
Frame = +2 / -1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 286 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 107
Query: 767 HC*SSTADFVSIALTEAYRGYASETKG 847
HC*SS+ D +SIAL E YRGY + T G
Sbjct: 106 HC*SSSRDGLSIALMEEYRGYNNVTTG 26
>gb|DR089709.1|DR089709 RTAL1_10_G10.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_10_G10_A029 3', mRNA sequence
Length = 712
Score = 164 bits (353), Expect = 1e-039
Identities = 62/85 (72%), Positives = 74/85 (87%)
Frame = -3 / +2
Query: 840 VSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFWSYAKLFFN 661
V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+ +LEWLPFW Y KL
Sbjct: 2 VTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWPYLKLIAT 181
Query: 660 CWLVLPQFNGAAHVYEHFVRPMIVN 586
CWLVLP FNGAA+VYE+FVR M++N
Sbjct: 182 CWLVLPVFNGAAYVYENFVRQMLLN 256
Score = 109 bits (232), Expect = 5e-023
Identities = 52/85 (61%), Positives = 62/85 (72%)
Frame = +2 / -2
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS+ K SSN V+NEY TQYVS
Sbjct: 255 FRSICLTKFSYT*AAPLNTGSTSQQVAISLR*GQNGNHSSSREKESSNSVMNEYRTQYVS 76
Query: 767 HC*SSTADFVSIALTEAYRGYASET 841
HC*SS+ D +SIAL E YRG ++ T
Sbjct: 75 HC*SSSRDGLSIALMEEYRG*SNVT 1
>gb|CX645893.1|CX645893 COLD1_5_H12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_5_H12_A029 5', mRNA sequence
Length = 583
Score = 157 bits (337), Expect = 2e-037
Identities = 57/99 (57%), Positives = 73/99 (73%)
Frame = -3 / +1
Query: 888 FLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAP 709
F + + D AGP+V L YPLYAS+RAIE+ S +DDQQWLTYW+LYS ITLFEL+F
Sbjct: 25 FFGAIARHFDTFAGPVVMLLYPLYASIRAIESPSELDDQQWLTYWILYSLITLFELSFYK 204
Query: 708 VLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMI 592
VL W+P W Y KL + WLV P FNGAA++YE ++R ++
Sbjct: 205 VLAWIPIWPYVKLVLSFWLVSPMFNGAAYIYEKYIRKLV 321
>gb|CO367704.1|CO367704 RTK1_36_B04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_B04_A029 3', mRNA sequence
Length = 837
Score = 149 bits (321), Expect = 2e-035
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = -3 / -2
Query: 819 YASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFWSYAKLFFNCWLVLPQ 640
Y+S+RAIE+ S +DDQQWLTYWV YSFITLFEL+F+ +LEWLPFW Y KL CWLVLP
Sbjct: 329 YSSIRAIESPSRLDDQQWLTYWVPYSFITLFELSFSRLLEWLPFWPYVKLIATCWLVLPV 150
Query: 639 FNGAAHVYEHFVRPMIVN 586
FNGAA+VYE+FVR M++N
Sbjct: 149 FNGAAYVYENFVRQMLLN 96
Score = 103 bits (220), Expect = 2e-021
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = +2 / +1
Query: 587 FTIIGLTKCSYTCAAPLNCGNTNQQLKNSFA*DQKGSHSSTGAKVSSNRVINEYSTQYVS 766
F I LTK SYT AAPLN G+T+QQ+ S * Q G+HSS K SSN V+NEY TQYVS
Sbjct: 97 FRSICLTKFSYT*AAPLNTGSTSQQVAISLT*GQNGNHSSRREKESSNSVMNEYGTQYVS 276
Query: 767 HC*SSTADFVSIALTEAY 820
HC*SS+ D +SIAL E Y
Sbjct: 277 HC*SSSRDGLSIALMEEY 330
>gb|CX712484.1|CX712484 RTPQ1_2_G01.g2_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_2_G01_A032 5', mRNA sequence
Length = 903
Score = 149 bits (321), Expect = 2e-035
Identities = 59/109 (54%), Positives = 78/109 (71%)
Frame = -3 / -1
Query: 879 VLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLE 700
V+ ++ +A P V L YPLYAS+RA+ + S +DDQQWLTYWVLYS ITLFELTF +L
Sbjct: 870 VVXKHIIKVAWPTVMLIYPLYASIRAMXSPSELDDQQWLTYWVLYSLITLFELTFYKILA 691
Query: 699 WLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVNQQVVNIWYIPK 553
W+P W Y KL WLVLP FNGAA++YE++VR +V ++ + +PK
Sbjct: 690 WIPIWPYVKLVLLFWLVLPMFNGAAYIYENYVRRFVVAKEQPSSPELPK 544
>gb|DR744595.1|DR744595 RTCU1_23_C03.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_C03_A029 5', mRNA sequence
Length = 599
Score = 149 bits (320), Expect = 3e-035
Identities = 56/77 (72%), Positives = 67/77 (87%)
Frame = -3 / -2
Query: 816 ASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFWSYAKLFFNCWLVLPQF 637
+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+ +LEWLPFW Y KL CWLVLP F
Sbjct: 598 SSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVF 419
Query: 636 NGAAHVYEHFVRPMIVN 586
NGAA+VYE+FVR M++N
Sbjct: 418 NGAAYVYENFVRQMLLN 368
>gb|BX253625.1|BX253625 BX253625 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP086B03 similar to POLYPOSIS LOCUS PROTEIN,
mRNA sequence
Length = 500
Score = 148 bits (317), Expect = 9e-035
Identities = 54/79 (68%), Positives = 67/79 (84%)
Frame = -3 / +2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 263 SFLKTVLYNIDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 442
Query: 711 PVLEWLPFWSYAKLFFNCW 655
+LEWLPFW Y KL CW
Sbjct: 443 RLLEWLPFWPYVKLIATCW 499
>gb|CF475707.1|CF475707 RTWW2_11_G10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_11_G10_A021 5', mRNA sequence
Length = 731
Score = 147 bits (315), Expect = 2e-034
Identities = 55/75 (73%), Positives = 65/75 (86%)
Frame = -3 / -3
Query: 810 VRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFWSYAKLFFNCWLVLPQFNG 631
+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+ +LEWLPFW Y KL CWLVLP FNG
Sbjct: 729 IRAIESPSRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNG 550
Query: 630 AAHVYEHFVRPMIVN 586
AA+VYE+FVR M++N
Sbjct: 549 AAYVYENFVRQMLLN 505
>gb|CO199374.1|CO199374 GEO1_20_F02.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_20_F02_A029 5', mRNA sequence
Length = 660
Score = 143 bits (306), Expect = 3e-033
Identities = 54/73 (73%), Positives = 63/73 (86%)
Frame = -3 / -2
Query: 807 RAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFWSYAKLFFNCWLVLPQFNGA 628
RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+ +LEWLPFW Y KL CWLVLP FNGA
Sbjct: 659 RAIESPSRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGA 480
Query: 627 AHVYEHFVRPMIV 589
A+VYE+FVR M++
Sbjct: 479 AYVYENFVRQMLL 441
>gb|DR058638.1|DR058638 RTNIT1_13_B05.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_B05_A029 3', mRNA sequence
Length = 659
Score = 142 bits (305), Expect = 4e-033
Identities = 54/74 (72%), Positives = 63/74 (85%)
Frame = -3 / +1
Query: 807 RAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFWSYAKLFFNCWLVLPQFNGA 628
RAIE+ S +DDQQWLTYWVLYSFITL EL+F+ +LEWLPFW Y KL CWLVLP FNGA
Sbjct: 1 RAIESPSRLDDQQWLTYWVLYSFITLXELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGA 180
Query: 627 AHVYEHFVRPMIVN 586
A+VYE+FVR M++N
Sbjct: 181 AYVYENFVRQMLLN 222
>gb|DR682839.1|DR682839 EST1072914 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAC56 3' end, mRNA sequence
Length = 803
Score = 140 bits (301), Expect = 1e-032
Identities = 52/74 (70%), Positives = 66/74 (89%)
Frame = -3 / +2
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 581 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 760
Query: 711 PVLEWLPFWSYAKL 670
+LEWLPFW+Y KL
Sbjct: 761 RLLEWLPFWAYLKL 802
>gb|DN632101.1|DN632101 EST982917 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACJ76, mRNA sequence
Length = 777
Score = 140 bits (300), Expect = 2e-032
Identities = 52/96 (54%), Positives = 69/96 (71%)
Frame = -3 / +1
Query: 876 LVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEW 697
+V+ + L GP + L YPLYAS+RAIE+ S VDD+QWLTYW+LYSF+TL E+ A + W
Sbjct: 106 IVSYLQSLTGPGLMLLYPLYASIRAIESPSKVDDEQWLTYWILYSFLTLVEMAAATLFSW 285
Query: 696 LPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIV 589
+PFW KL F WLVLPQF GA+ +Y+ FV ++
Sbjct: 286 IPFWHPVKLAFIAWLVLPQFRGASFIYQRFVGEQLI 393
>gb|DT630456.1|DT630456 EST1154868 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PIME915, mRNA sequence
Length = 830
Score = 140 bits (300), Expect = 2e-032
Identities = 52/96 (54%), Positives = 69/96 (71%)
Frame = -3 / +2
Query: 876 LVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFAPVLEW 697
+V+ + L GP + L YPLYAS+RAIE+ S VDD+QWLTYW+LYSF+TL E+ A + W
Sbjct: 128 IVSYLQSLTGPGLMLLYPLYASIRAIESPSKVDDEQWLTYWILYSFLTLVEMAAATLFSW 307
Query: 696 LPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIV 589
+PFW KL F WLVLPQF GA+ +Y+ FV ++
Sbjct: 308 IPFWHPVKLAFIAWLVLPQFRGASFIYQRFVGEQLI 415
>gb|BX252707.1|BX252707 BX252707 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP069D07 similar to POLYPOSIS LOCUS PROTEIN,
mRNA sequence
Length = 676
Score = 138 bits (295), Expect = 1e-031
Identities = 51/68 (75%), Positives = 59/68 (86%)
Frame = -3 / +2
Query: 789 SAVDDQQWLTYWVLYSFITLFELTFAPVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEH 610
S +DDQQWLTYWVLYSFITLFEL+F+ +LEWLPFW Y KL CWLVLP FNGAA+VYE+
Sbjct: 5 SRLDDQQWLTYWVLYSFITLFELSFSRLLEWLPFWPYVKLIATCWLVLPVFNGAAYVYEN 184
Query: 609 FVRPMIVN 586
FVR M++N
Sbjct: 185 FVRQMLLN 208
>gb|BG318905.1|BG318905 NXPV_021_C11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_021_C11 5' similar to Arabidopsis
thaliana sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 503
Score = 137 bits (294), Expect = 1e-031
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 246 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 425
Query: 711 PVLEWLPFWSYAKLFFNCWLVLPQF 637
+LEWLP Y L C LVL F
Sbjct: 426 RLLEWLPXXXYLXLIATCXLVLXXF 500
>gb|DR012588.1|DR012588 HEAT1_13_G02.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_13_G02_A029 5', mRNA sequence
Length = 722
Score = 133 bits (285), Expect = 2e-030
Identities = 49/69 (71%), Positives = 62/69 (89%)
Frame = -3 / +3
Query: 891 SFLKVLVNNMDVLAGPLVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFA 712
SFLK ++ N+D+ AGP+V+L YPLY+S+RAIE+ S +DDQQWLTYWVLYSFITLFEL+F+
Sbjct: 516 SFLKAVLYNLDIFAGPVVTLLYPLYSSIRAIESPSRLDDQQWLTYWVLYSFITLFELSFS 695
Query: 711 PVLEWLPFW 685
+LEWLPFW
Sbjct: 696 RLLEWLPFW 722
>gb|DN612978.1|DN612978 EST966028 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABM55, mRNA sequence
Length = 424
Score = 110 bits (235), Expect = 2e-023
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = -3 / +3
Query: 756 WVLYSFITLFELTFAPVLEWLPFWSYAKLFFNCWLVLPQFNGAAHVYEHFVRPMIVN 586
WVLYSFITLFEL+F+ +LEWLPFW Y KL CWLVLP FNGAA+VYE+ VR M++N
Sbjct: 3 WVLYSFITLFELSFSRLLEWLPFWPYLKLIATCWLVLPVFNGAAYVYENLVRQMLLN 173
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 586,037,297
Number of Sequences: 355925
Number of extensions: 8699273
Number of successful extensions: 47021
Number of sequences better than 1.0e-020: 59
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 17461120720
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)