TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.3
(801 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX254201.1|BX254201 BX254201 Pinus pinaster differenciat... 253 1e-066
gb|CR354638.1|CR354638 CR354638 Pinus pinaster differenciat... 253 1e-066
gb|CR354740.1|CR354740 CR354740 Pinus pinaster differenciat... 253 1e-066
gb|BQ290460.1|BQ290460 NXRV046_E07_F NXRV (Nsf Xylem Root w... 252 2e-066
gb|CX714968.1|CX714968 RTPQ1_28_E12.g1_A032 Roots treated w... 252 3e-066
gb|DR081240.1|DR081240 RTFEPL1_28_G08.b1_A029 Roots plus ad... 252 3e-066
gb|DR386241.1|DR386241 RTHG1_13_G06.g1_A029 Roots plus adde... 252 3e-066
gb|BQ698941.1|BQ698941 NXRV117_D04_F NXRV (Nsf Xylem Root w... 249 2e-065
gb|BQ701629.1|BQ701629 NXSI_111_G08_F NXSI (Nsf Xylem Side ... 249 2e-065
gb|DR687844.1|DR687844 EST1077927 Normalized pine embryo li... 248 4e-065
gb|DT634364.1|DT634364 EST1149295 Normalized pine embryo li... 248 4e-065
gb|DR096714.1|DR096714 STRR1_29_G01.g1_A033 Stem Response R... 248 5e-065
gb|AI812834.1|AI812834 19H3 Pine Lambda Zap Xylem library P... 247 7e-065
gb|AL750924.1|AL750924 AL750924 RS Pinus pinaster cDNA clon... 247 7e-065
gb|AL751075.1|AL751075 AL751075 RS Pinus pinaster cDNA clon... 247 7e-065
gb|BX249075.1|BX249075 BX249075 Pinus pinaster differenciat... 247 7e-065
gb|BX249530.1|BX249530 BX249530 Pinus pinaster differenciat... 247 7e-065
gb|BX253410.1|BX253410 BX253410 Pinus pinaster differenciat... 247 7e-065
gb|BX253827.1|BX253827 BX253827 Pinus pinaster differenciat... 247 7e-065
gb|BG040720.1|BG040720 NXSI_114_C09_F NXSI (Nsf Xylem Side ... 247 7e-065
gb|BQ703180.1|BQ703180 NXSI_137_E12_F NXSI (Nsf Xylem Side ... 247 7e-065
gb|CF472547.1|CF472547 RTDS1_10_E04.g1_A015 Drought-stresse... 247 7e-065
gb|CF476158.1|CF476158 RTWW2_21_H04.g1_A021 Well-watered lo... 247 7e-065
gb|CF669131.1|CF669131 RTCNT1_40_G09.g1_A029 Root control P... 247 7e-065
gb|CF670058.1|CF670058 RTCNT1_47_G09.g1_A029 Root control P... 247 7e-065
gb|BX681751.1|BX681751 BX681751 RS Pinus pinaster cDNA clon... 247 7e-065
gb|BX681807.1|BX681807 BX681807 RS Pinus pinaster cDNA clon... 247 7e-065
gb|CR392451.1|CR392451 CR392451 RN Pinus pinaster cDNA clon... 247 7e-065
gb|CX651979.1|CX651979 COLD1_56_D01.b1_A029 Root cold Pinus... 247 7e-065
gb|CX652049.1|CX652049 COLD1_56_D01.g1_A029 Root cold Pinus... 247 7e-065
gb|DR012165.1|DR012165 HEAT1_10_D11.g1_A029 Root at 37 C fo... 247 7e-065
gb|DR119433.1|DR119433 RTMG1_23_F01.b1_A029 Roots minus mag... 247 7e-065
gb|DR119514.1|DR119514 RTMG1_23_F01.g1_A029 Roots minus mag... 247 7e-065
gb|DR742542.1|DR742542 RTCU1_4_G11.g1_A029 Roots plus added... 247 7e-065
gb|BQ290949.1|BQ290949 NXRV051_G01_F NXRV (Nsf Xylem Root w... 247 9e-065
gb|BQ701872.1|BQ701872 NXSI_121_F01_F NXSI (Nsf Xylem Side ... 246 1e-064
gb|BQ702611.1|BQ702611 NXSI_130_E08_F NXSI (Nsf Xylem Side ... 246 1e-064
gb|CF666732.1|CF666732 RTCNT1_25_E11.g1_A029 Root control P... 246 2e-064
gb|AA556860.1|AA556860 702 Loblolly pine C Pinus taeda cDNA... 242 2e-063
gb|BG039583.1|BG039583 NXSI_100_F06_F NXSI (Nsf Xylem Side ... 242 3e-063
gb|CO172881.1|CO172881 NDL1_32_B08.g1_A029 Needles control ... 238 4e-062
gb|BG275750.1|BG275750 NXSI_145_E05_F NXSI (Nsf Xylem Side ... 237 7e-062
gb|CR392154.1|CR392154 CR392154 RN Pinus pinaster cDNA clon... 235 4e-061
gb|BM492300.1|BM492300 NXRV_024_C12_F NXRV (Nsf Xylem Root ... 232 2e-060
gb|CX714867.1|CX714867 RTPQ1_27_E03.g1_A032 Roots treated w... 232 2e-060
gb|AW870058.1|AW870058 NXNV_123_E12_F Nsf Xylem Normal wood... 228 4e-059
gb|BF777299.1|BF777299 NXSI_067_E06_F NXSI (Nsf Xylem Side ... 227 6e-059
gb|DT635114.1|DT635114 EST1150045 Normalized pine embryo li... 226 1e-058
gb|CF667184.1|CF667184 RTCNT1_28_E02.g1_A029 Root control P... 223 1e-057
gb|BX680248.1|BX680248 BX680248 RS Pinus pinaster cDNA clon... 220 1e-056
gb|BG040817.1|BG040817 NXSI_115_D12_F NXSI (Nsf Xylem Side ... 209 2e-053
gb|CX714815.1|CX714815 RTPQ1_27_E03.b1_A032 Roots treated w... 202 3e-051
gb|DR689070.1|DR689070 EST1079156 Normalized pine embryo li... 196 4e-050
gb|DR012095.1|DR012095 HEAT1_10_D11.b1_A029 Root at 37 C fo... 192 3e-048
gb|DR168863.1|DR168863 RTPHOS1_28_H04.b1_A029 Roots minus p... 189 2e-047
gb|BE496277.1|BE496277 NXCI_022_B05_F NXCI (Nsf Xylem Compr... 187 8e-047
gb|CF667097.1|CF667097 RTCNT1_28_E02.b1_A029 Root control P... 186 2e-046
gb|DR012421.1|DR012421 HEAT1_12_E11.g1_A029 Root at 37 C fo... 181 5e-045
gb|BX682672.1|BX682672 BX682672 Pinus pinaster differenciat... 178 5e-044
gb|CF472533.1|CF472533 RTDS1_10_E04.b1_A015 Drought-stresse... 171 7e-042
gb|CO172808.1|CO172808 NDL1_32_B08.b1_A029 Needles control ... 169 2e-041
gb|BG275270.1|BG275270 NXSI_138_F04_F NXSI (Nsf Xylem Side ... 161 4e-039
gb|BQ633914.1|BQ633914 NXRV062_D05_F NXRV (Nsf Xylem Root w... 159 3e-038
gb|AI784911.1|AI784911 1274 PtIFG2 Pinus taeda cDNA clone 9... 154 9e-037
gb|BQ698581.1|BQ698581 NXPV_071_F06_F NXPV (Nsf Xylem Plani... 149 2e-035
gb|CD027980.1|CD027980 NXNV_143_C09_F Nsf Xylem Normal wood... 148 4e-035
gb|BF609659.1|BF609659 NXSI_047_G06_F NXSI (Nsf Xylem Side ... 146 2e-034
gb|AA739764.1|AA739764 529 PtIFG2 Pinus taeda cDNA clone 88... 145 3e-034
gb|AA739890.1|AA739890 655 PtIFG2 Pinus taeda cDNA clone 90... 139 2e-032
gb|AI725054.1|AI725054 953 PtIFG2 Pinus taeda cDNA clone 88... 116 4e-032
gb|BE758746.1|BE758746 NXCI_060_E06_F NXCI (Nsf Xylem Compr... 125 3e-028
gb|BE123630.1|BE123630 NXNV_146_H12_F Nsf Xylem Normal wood... 121 6e-027
gb|BE241224.1|BE241224 NXNV_180_G04_F Nsf Xylem Normal wood... 121 6e-027
gb|BE643949.1|BE643949 NXCI_050_E12_F NXCI (Nsf Xylem Compr... 115 5e-025
gb|CD021455.1|CD021455 NXNV_145_A10_F Nsf Xylem Normal wood... 112 3e-024
>gb|BX254201.1|BX254201 BX254201 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP094G06, mRNA sequence
Length = 677
Score = 253 bits (547), Expect = 1e-066
Identities = 106/140 (75%), Positives = 124/140 (88%)
Frame = +2 / +3
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 90 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 269
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI RVPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 270 KIDIPRVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 449
Query: 449 GAIRQELSKLKKASTA*VPF 508
I++ELSKLKK + * F
Sbjct: 450 TLIKRELSKLKKENPV*QCF 509
Score = 151 bits (324), Expect = 6e-036
Identities = 74/134 (55%), Positives = 85/134 (63%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FFS ESS L++ PLLILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 487 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 308
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 307 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 128
Query: 126 RPISTNLLNGILAA 85
RPIS L G++A+
Sbjct: 127 RPISIKRLKGMVAS 86
>gb|CR354638.1|CR354638 CR354638 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 124C07, mRNA sequence
Length = 638
Score = 253 bits (547), Expect = 1e-066
Identities = 106/140 (75%), Positives = 124/140 (88%)
Frame = +2 / +2
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 92 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 271
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI RVPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 272 KIDIPRVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 451
Query: 449 GAIRQELSKLKKASTA*VPF 508
I++ELSKLKK + * F
Sbjct: 452 TLIKRELSKLKKENPV*QCF 511
Score = 151 bits (324), Expect = 6e-036
Identities = 74/134 (55%), Positives = 85/134 (63%)
Frame = -1 / -3
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FFS ESS L++ PLLILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 489 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 310
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 309 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 130
Query: 126 RPISTNLLNGILAA 85
RPIS L G++A+
Sbjct: 129 RPISIKRLKGMVAS 88
>gb|CR354740.1|CR354740 CR354740 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 125G11, mRNA sequence
Length = 631
Score = 253 bits (547), Expect = 1e-066
Identities = 106/140 (75%), Positives = 124/140 (88%)
Frame = +2 / +3
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 90 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 269
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI RVPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 270 KIDIPRVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 449
Query: 449 GAIRQELSKLKKASTA*VPF 508
I++ELSKLKK + * F
Sbjct: 450 TLIKRELSKLKKENPV*QCF 509
Score = 151 bits (324), Expect = 6e-036
Identities = 74/134 (55%), Positives = 85/134 (63%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FFS ESS L++ PLLILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 487 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 308
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 307 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 128
Query: 126 RPISTNLLNGILAA 85
RPIS L G++A+
Sbjct: 127 RPISIKRLKGMVAS 86
>gb|BQ290460.1|BQ290460 NXRV046_E07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV046_E07 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 540
Score = 252 bits (545), Expect = 2e-066
Identities = 105/142 (73%), Positives = 125/142 (88%)
Frame = +2 / +1
Query: 83 TAARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLT 262
+ A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLT
Sbjct: 43 SXATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLT 222
Query: 263 DIKIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIK 442
DIKIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IK
Sbjct: 223 DIKIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIK 402
Query: 443 RGGAIRQELSKLKKASTA*VPF 508
RG I++ELSKLKK + * F
Sbjct: 403 RGTLIKRELSKLKKENPV*QCF 468
Score = 150 bits (323), Expect = 9e-036
Identities = 74/133 (55%), Positives = 84/133 (63%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FFS ESS L++ PLLILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 446 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 267
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 266 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 87
Query: 126 RPISTNLLNGILA 88
RPIS L G++A
Sbjct: 86 RPISIKRLKGMVA 48
>gb|CX714968.1|CX714968 RTPQ1_28_E12.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_28_E12_A032 5', mRNA sequence
Length = 847
Score = 252 bits (544), Expect = 3e-066
Identities = 105/140 (75%), Positives = 124/140 (88%)
Frame = +2 / +3
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 42 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 221
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 222 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 401
Query: 449 GAIRQELSKLKKASTA*VPF 508
I++ELSKLKK + * F
Sbjct: 402 TLIKRELSKLKKENPV*QCF 461
Score = 151 bits (324), Expect = 6e-036
Identities = 74/134 (55%), Positives = 85/134 (63%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FFS ESS L++ PLLILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 439 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 260
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 259 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 80
Query: 126 RPISTNLLNGILAA 85
RPIS L G++A+
Sbjct: 79 RPISIKRLKGMVAS 38
>gb|DR081240.1|DR081240 RTFEPL1_28_G08.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_28_G08_A029 3', mRNA sequence
Length = 669
Score = 252 bits (544), Expect = 3e-066
Identities = 105/140 (75%), Positives = 124/140 (88%)
Frame = +2 / -3
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 529 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 350
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 349 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 170
Query: 449 GAIRQELSKLKKASTA*VPF 508
I++ELSKLKK + * F
Sbjct: 169 TLIKRELSKLKKENPV*QCF 110
Score = 151 bits (324), Expect = 6e-036
Identities = 74/134 (55%), Positives = 85/134 (63%)
Frame = -1 / +3
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FFS ESS L++ PLLILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 132 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 311
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 312 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 491
Query: 126 RPISTNLLNGILAA 85
RPIS L G++A+
Sbjct: 492 RPISIKRLKGMVAS 533
>gb|DR386241.1|DR386241 RTHG1_13_G06.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_G06_A029 5', mRNA sequence
Length = 713
Score = 252 bits (544), Expect = 3e-066
Identities = 105/140 (75%), Positives = 124/140 (88%)
Frame = +2 / +3
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 15 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 194
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 195 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 374
Query: 449 GAIRQELSKLKKASTA*VPF 508
I++ELSKLKK + * F
Sbjct: 375 TLIKRELSKLKKENPV*QCF 434
Score = 151 bits (324), Expect = 6e-036
Identities = 74/134 (55%), Positives = 85/134 (63%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FFS ESS L++ PLLILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 412 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 233
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 232 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 53
Query: 126 RPISTNLLNGILAA 85
RPIS L G++A+
Sbjct: 52 RPISIKRLKGMVAS 11
>gb|BQ698941.1|BQ698941 NXRV117_D04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV117_D04 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 512
Score = 249 bits (538), Expect = 2e-065
Identities = 102/131 (77%), Positives = 120/131 (91%)
Frame = +2 / +3
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 51 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 230
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 231 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 410
Query: 449 GAIRQELSKLK 481
I++ELSKLK
Sbjct: 411 TLIKRELSKLK 443
Score = 152 bits (327), Expect = 2e-036
Identities = 75/133 (56%), Positives = 85/133 (63%)
Frame = -1 / -2
Query: 483 FFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIK 304
FFSLESS L++ PLLILASM F TI+F PHEL SHL TSA+S+A IK
Sbjct: 445 FFSLESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIK 266
Query: 303 VDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATR 124
F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RATR
Sbjct: 265 TFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATR 86
Query: 123 PISTNLLNGILAA 85
PIS L G++A+
Sbjct: 85 PISIKRLKGMVAS 47
>gb|BQ701629.1|BQ701629 NXSI_111_G08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_111_G08 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 541
Score = 249 bits (538), Expect = 2e-065
Identities = 104/140 (74%), Positives = 123/140 (87%)
Frame = +2 / +3
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 48 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 227
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IK G
Sbjct: 228 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKXG 407
Query: 449 GAIRQELSKLKKASTA*VPF 508
I++ELSKLKK + * F
Sbjct: 408 TLIKRELSKLKKENPV*QCF 467
Score = 149 bits (319), Expect = 3e-035
Identities = 73/134 (54%), Positives = 84/134 (62%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FFS ESS L++ P LILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 445 SFFSFESSRLMSVPXLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 266
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 265 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 86
Query: 126 RPISTNLLNGILAA 85
RPIS L G++A+
Sbjct: 85 RPISIKRLKGMVAS 44
>gb|DR687844.1|DR687844 EST1077927 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABX25 3' end, mRNA sequence
Length = 841
Score = 248 bits (536), Expect = 4e-065
Identities = 103/137 (75%), Positives = 122/137 (89%)
Frame = +2 / +3
Query: 98 PFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKID 277
PF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDIKID
Sbjct: 159 PFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDIKID 338
Query: 278 IKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAI 457
I +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG I
Sbjct: 339 IPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTLI 518
Query: 458 RQELSKLKKASTA*VPF 508
++ELSKLKK + * F
Sbjct: 519 KRELSKLKKENPV*QCF 569
Score = 148 bits (317), Expect = 6e-035
Identities = 73/130 (56%), Positives = 81/130 (62%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FFS ESS L++ PLLILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 547 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 368
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 367 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 188
Query: 126 RPISTNLLNG 97
RPIS L G
Sbjct: 187 RPISIKRLKG 158
>gb|DT634364.1|DT634364 EST1149295 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG518 3' end, mRNA sequence
Length = 803
Score = 248 bits (536), Expect = 4e-065
Identities = 103/137 (75%), Positives = 122/137 (89%)
Frame = +2 / +2
Query: 98 PFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKID 277
PF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDIKID
Sbjct: 167 PFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDIKID 346
Query: 278 IKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAI 457
I +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG I
Sbjct: 347 IPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTLI 526
Query: 458 RQELSKLKKASTA*VPF 508
++ELSKLKK + * F
Sbjct: 527 KRELSKLKKENPV*QCF 577
Score = 148 bits (317), Expect = 6e-035
Identities = 73/130 (56%), Positives = 81/130 (62%)
Frame = -1 / -3
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FFS ESS L++ PLLILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 555 SFFSFESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 376
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 375 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 196
Query: 126 RPISTNLLNG 97
RPIS L G
Sbjct: 195 RPISIKRLKG 166
>gb|DR096714.1|DR096714 STRR1_29_G01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_29_G01_A033 5', mRNA sequence
Length = 708
Score = 248 bits (535), Expect = 5e-065
Identities = 104/140 (74%), Positives = 123/140 (87%)
Frame = +2 / +2
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 2 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 181
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 182 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 361
Query: 449 GAIRQELSKLKKASTA*VPF 508
I++ELS LKK + * F
Sbjct: 362 TLIKRELS*LKKENPV*QCF 421
Score = 150 bits (322), Expect = 1e-035
Identities = 74/133 (55%), Positives = 84/133 (63%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FFS ESS L++ PLLILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 399 SFFSYESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 220
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 219 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 40
Query: 126 RPISTNLLNGILA 88
RPIS L G++A
Sbjct: 39 RPISIKRLKGMVA 1
>gb|AI812834.1|AI812834 19H3 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 573
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +1
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 34 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 213
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 214 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 393
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 394 IKRELSKLKK 423
Score = 148 bits (318), Expect = 4e-035
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 425 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 246
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 245 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 66
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 65 RPIST*RLKGMMS 27
>gb|AL750924.1|AL750924 AL750924 RS Pinus pinaster cDNA clone RS02A09 similar to RP L14,
mRNA sequence
Length = 596
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +1
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 112 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 291
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 292 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 471
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 472 IKRELSKLKK 501
Score = 148 bits (318), Expect = 4e-035
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 503 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 324
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 323 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 144
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 143 RPIST*RLKGMMS 105
>gb|AL751075.1|AL751075 AL751075 RS Pinus pinaster cDNA clone RS03G08 similar to RP L14,
mRNA sequence
Length = 605
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +3
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 102 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 281
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 282 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 461
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 462 IKRELSKLKK 491
Score = 146 bits (314), Expect = 2e-034
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 493 SFFNFESSRLISVPLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASI 314
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 313 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 134
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 133 RPIST*RLKGMMS 95
>gb|BX249075.1|BX249075 BX249075 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP015C05 similar to 60S RIBOSOMAL PROTEIN
L14, mRNA sequence
Length = 651
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 107 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 286
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 287 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 466
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 467 IKRELSKLKK 496
Score = 146 bits (314), Expect = 2e-034
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 498 SFFNFESSRLISVPLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASI 319
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 318 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 139
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 138 RPIST*RLKGMMS 100
>gb|BX249530.1|BX249530 BX249530 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP025B05 similar to 60S RIBOSOMAL PROTEIN
L14, mRNA sequence
Length = 673
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 161 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 340
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 341 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 520
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 521 IKRELSKLKK 550
Score = 146 bits (314), Expect = 2e-034
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 552 SFFNFESSRLISVPLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASI 373
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 372 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 193
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 192 RPIST*RLKGMMS 154
>gb|BX253410.1|BX253410 BX253410 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP083B09 similar to 60S RIBOSOMAL PROTEIN
L14, mRNA sequence
Length = 688
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +3
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 75 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 254
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 255 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 434
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 435 IKRELSKLKK 464
Score = 146 bits (314), Expect = 2e-034
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 466 SFFNFESSRLISVPLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASI 287
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 286 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 107
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 106 RPIST*RLKGMMS 68
>gb|BX253827.1|BX253827 BX253827 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP089B08 similar to 60S RIBOSOMAL PROTEIN
L14, mRNA sequence
Length = 686
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +3
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 108 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 287
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 288 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 467
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 468 IKRELSKLKK 497
Score = 146 bits (314), Expect = 2e-034
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 499 SFFNFESSRLISVPLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASI 320
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 319 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 140
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 139 RPIST*RLKGMMS 101
>gb|BG040720.1|BG040720 NXSI_114_C09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_114_C09 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 537
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +3
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 33 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 212
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 213 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 392
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 393 IKRELSKLKK 422
Score = 148 bits (318), Expect = 4e-035
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -3
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 424 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 245
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 244 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 65
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 64 RPIST*RLKGMMS 26
>gb|BQ703180.1|BQ703180 NXSI_137_E12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_137_E12 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 539
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +3
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 33 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 212
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 213 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 392
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 393 IKRELSKLKK 422
Score = 148 bits (318), Expect = 4e-035
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 424 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 245
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 244 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 65
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 64 RPIST*RLKGMMS 26
>gb|CF472547.1|CF472547 RTDS1_10_E04.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_10_E04_A015 5', mRNA sequence
Length = 772
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +1
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 160 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 339
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 340 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 519
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 520 IKRELSKLKK 549
Score = 149 bits (319), Expect = 3e-035
Identities = 76/133 (57%), Positives = 86/133 (64%)
Frame = -1 / -3
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+LESS LI+ PLLILASM F TI+F PHELFSHL TSA S+A I
Sbjct: 551 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 372
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 371 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 192
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 191 RPIST*RLKGMMS 153
>gb|CF476158.1|CF476158 RTWW2_21_H04.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_21_H04_A021 5', mRNA sequence
Length = 767
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +1
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 79 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 258
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 259 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 438
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 439 IKRELSKLKK 468
Score = 149 bits (319), Expect = 3e-035
Identities = 76/133 (57%), Positives = 86/133 (64%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+LESS LI+ PLLILASM F TI+F PHELFSHL TSA S+A I
Sbjct: 470 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 291
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 290 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 111
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 110 RPIST*RLKGMMS 72
>gb|CF669131.1|CF669131 RTCNT1_40_G09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_40_G09_A029 5', mRNA sequence
Length = 755
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +1
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 145 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 324
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 325 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 504
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 505 IKRELSKLKK 534
Score = 149 bits (319), Expect = 3e-035
Identities = 76/133 (57%), Positives = 86/133 (64%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+LESS LI+ PLLILASM F TI+F PHELFSHL TSA S+A I
Sbjct: 536 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 357
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 356 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 177
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 176 RPIST*RLKGMMS 138
>gb|CF670058.1|CF670058 RTCNT1_47_G09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_47_G09_A029 5', mRNA sequence
Length = 730
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 116 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 295
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 296 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 475
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 476 IKRELSKLKK 505
Score = 149 bits (319), Expect = 3e-035
Identities = 76/133 (57%), Positives = 86/133 (64%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+LESS LI+ PLLILASM F TI+F PHELFSHL TSA S+A I
Sbjct: 507 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 328
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 327 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 148
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 147 RPIST*RLKGMMS 109
>gb|BX681751.1|BX681751 BX681751 RS Pinus pinaster cDNA clone RS63H06, mRNA sequence
Length = 601
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 23 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 202
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 203 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 382
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 383 IKRELSKLKK 412
Score = 148 bits (318), Expect = 4e-035
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 414 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 235
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 234 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 55
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 54 RPIST*RLKGMMS 16
>gb|BX681807.1|BX681807 BX681807 RS Pinus pinaster cDNA clone RS65B08, mRNA sequence
Length = 522
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +3
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 108 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 287
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 288 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 467
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 468 IKRELSKLKK 497
Score = 148 bits (318), Expect = 4e-035
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -3
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 499 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 320
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 319 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 140
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 139 RPIST*RLKGMMS 101
>gb|CR392451.1|CR392451 CR392451 RN Pinus pinaster cDNA clone RN32C02, mRNA sequence
Length = 537
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +1
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 112 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 291
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 292 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 471
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 472 IKRELSKLKK 501
Score = 148 bits (318), Expect = 4e-035
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 503 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 324
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 323 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 144
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 143 RPIST*RLKGMMS 105
>gb|CX651979.1|CX651979 COLD1_56_D01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_D01_A029 3', mRNA sequence
Length = 693
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / -2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 572 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 393
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 392 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 213
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 212 IKRELSKLKK 183
Score = 149 bits (319), Expect = 3e-035
Identities = 76/133 (57%), Positives = 86/133 (64%)
Frame = -1 / +1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+LESS LI+ PLLILASM F TI+F PHELFSHL TSA S+A I
Sbjct: 181 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 360
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 361 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 540
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 541 RPIST*RLKGMMS 579
>gb|CX652049.1|CX652049 COLD1_56_D01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_D01_A029 5', mRNA sequence
Length = 762
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / -1
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 654 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 475
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 474 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 295
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 294 IKRELSKLKK 265
Score = 149 bits (319), Expect = 3e-035
Identities = 76/133 (57%), Positives = 86/133 (64%)
Frame = -1 / +2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+LESS LI+ PLLILASM F TI+F PHELFSHL TSA S+A I
Sbjct: 263 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 442
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 443 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 622
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 623 RPIST*RLKGMMS 661
>gb|DR012165.1|DR012165 HEAT1_10_D11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_10_D11_A029 5', mRNA sequence
Length = 775
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +3
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 240 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 419
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 420 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 599
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 600 IKRELSKLKK 629
Score = 148 bits (318), Expect = 4e-035
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 631 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 452
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 451 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 272
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 271 RPIST*RLKGMMS 233
>gb|DR119433.1|DR119433 RTMG1_23_F01.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_F01_A029 3', mRNA sequence
Length = 762
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +3
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 54 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 233
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 234 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 413
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 414 IKRELSKLKK 443
Score = 149 bits (319), Expect = 3e-035
Identities = 76/133 (57%), Positives = 86/133 (64%)
Frame = -1 / -3
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+LESS LI+ PLLILASM F TI+F PHELFSHL TSA S+A I
Sbjct: 445 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 266
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 265 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 86
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 85 RPIST*RLKGMMS 47
>gb|DR119514.1|DR119514 RTMG1_23_F01.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_F01_A029 5', mRNA sequence
Length = 770
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 122 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 301
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 302 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 481
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 482 IKRELSKLKK 511
Score = 149 bits (319), Expect = 3e-035
Identities = 76/133 (57%), Positives = 86/133 (64%)
Frame = -1 / -3
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+LESS LI+ PLLILASM F TI+F PHELFSHL TSA S+A I
Sbjct: 513 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 334
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 333 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 154
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 153 RPIST*RLKGMMS 115
>gb|DR742542.1|DR742542 RTCU1_4_G11.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_4_G11_A029 5', mRNA sequence
Length = 806
Score = 247 bits (534), Expect = 7e-065
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +2 / -3
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 714 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 535
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 534 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 355
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 354 IKRELSKLKK 325
Score = 148 bits (318), Expect = 4e-035
Identities = 76/133 (57%), Positives = 85/133 (63%)
Frame = -1 / +2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 323 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 502
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 503 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 682
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 683 RPIST*RLKGMMS 721
>gb|BQ290949.1|BQ290949 NXRV051_G01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV051_G01 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 536
Score = 247 bits (533), Expect = 9e-065
Identities = 101/132 (76%), Positives = 119/132 (90%)
Frame = +2 / +1
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 49 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 228
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 229 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 408
Query: 449 GAIRQELSKLKK 484
I++EL LKK
Sbjct: 409 TLIKRELXXLKK 444
Score = 146 bits (313), Expect = 2e-034
Identities = 72/134 (53%), Positives = 83/134 (61%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF SS L++ PLLILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 446 SFFXXXSSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 267
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 266 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 87
Query: 126 RPISTNLLNGILAA 85
RPIS L G++A+
Sbjct: 86 RPISIKRLKGMVAS 45
>gb|BQ701872.1|BQ701872 NXSI_121_F01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_121_F01 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 552
Score = 246 bits (532), Expect = 1e-064
Identities = 103/140 (73%), Positives = 122/140 (87%)
Frame = +2 / +1
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 58 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 237
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+I G
Sbjct: 238 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIXXG 417
Query: 449 GAIRQELSKLKKASTA*VPF 508
I++ELSKLKK + * F
Sbjct: 418 TLIKRELSKLKKENPV*QCF 477
Score = 146 bits (314), Expect = 2e-034
Identities = 72/134 (53%), Positives = 83/134 (61%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FFS ESS L++ P ILASM F TI+F PHEL SHL TSA+S+A I
Sbjct: 455 SFFSFESSRLMSVPXXILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASI 276
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RAT
Sbjct: 275 KTFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRAT 96
Query: 126 RPISTNLLNGILAA 85
RPIS L G++A+
Sbjct: 95 RPISIKRLKGMVAS 54
>gb|BQ702611.1|BQ702611 NXSI_130_E08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_130_E08 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 479
Score = 246 bits (532), Expect = 1e-064
Identities = 101/131 (77%), Positives = 119/131 (90%)
Frame = +2 / +3
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 60 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 239
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 240 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 419
Query: 449 GAIRQELSKLK 481
I++ELS LK
Sbjct: 420 TLIKRELSXLK 452
Score = 150 bits (322), Expect = 1e-035
Identities = 74/133 (55%), Positives = 84/133 (63%)
Frame = -1 / -2
Query: 483 FFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIK 304
FFS ESS L++ PLLILASM F TI+F PHEL SHL TSA+S+A IK
Sbjct: 454 FFSXESSRLMSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIK 275
Query: 303 VDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATR 124
F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RATR
Sbjct: 274 TFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATR 95
Query: 123 PISTNLLNGILAA 85
PIS L G++A+
Sbjct: 94 PISIKRLKGMVAS 56
>gb|CF666732.1|CF666732 RTCNT1_25_E11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_25_E11_A029 5', mRNA sequence
Length = 727
Score = 246 bits (531), Expect = 2e-064
Identities = 103/130 (79%), Positives = 118/130 (90%)
Frame = +2 / +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDI+I
Sbjct: 140 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIRI 319
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 320 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 499
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 500 IKRELSKLKK 529
Score = 149 bits (319), Expect = 3e-035
Identities = 76/133 (57%), Positives = 86/133 (64%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+LESS LI+ PLLILASM F TI+F PHELFSHL TSA S+A I
Sbjct: 531 SFFNLESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASI 352
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 351 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 172
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 171 RPIST*RLKGMMS 133
>gb|AA556860.1|AA556860 702 Loblolly pine C Pinus taeda cDNA clone 6C7E, mRNA sequence
Length = 589
Score = 242 bits (523), Expect = 2e-063
Identities = 102/130 (78%), Positives = 116/130 (89%)
Frame = +2 / +3
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 96 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 275
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+I +G
Sbjct: 276 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIXKGXL 455
Query: 455 IRQELSKLKK 484
I +ELSKLKK
Sbjct: 456 IXRELSKLKK 485
Score = 142 bits (304), Expect = 4e-033
Identities = 73/133 (54%), Positives = 82/133 (61%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS I+ P ILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 487 SFFNFESSRXISXPFXILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 308
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 307 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 128
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 127 RPIST*RLKGMMS 89
>gb|BG039583.1|BG039583 NXSI_100_F06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_100_F06 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 500
Score = 242 bits (522), Expect = 3e-063
Identities = 99/131 (75%), Positives = 117/131 (89%)
Frame = +2 / +1
Query: 89 ARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDI 268
A MPF+RF+EIGRVAL+NYG DYG+LVVIVDVVDQNRALVDAP MVRCQ+NFKRLSLTDI
Sbjct: 37 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 216
Query: 269 KIDIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRG 448
KIDI +VPKK LI+ ME A+V+ +W+NSSWG+KLIVQKRRA L+DF+RFK+MLA+I G
Sbjct: 217 KIDIPKVPKKKVLIEXMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIXXG 396
Query: 449 GAIRQELSKLK 481
I++ELSKLK
Sbjct: 397 TLIKRELSKLK 429
Score = 144 bits (309), Expect = 7e-034
Identities = 71/133 (53%), Positives = 81/133 (60%)
Frame = -1 / -1
Query: 483 FFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIK 304
FFS ESS L++ P ILASM F TI+F PHEL SHL TSA+S+ IK
Sbjct: 431 FFSFESSRLMSVPXXILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMXSIK 252
Query: 303 VDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATR 124
F GT +SIL+SVSES LK IWHLTI GAST A FW P*S P* RATR
Sbjct: 251 TFFFGTLGISILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATR 72
Query: 123 PISTNLLNGILAA 85
PIS L G++A+
Sbjct: 71 PISIKRLKGMVAS 33
>gb|CO172881.1|CO172881 NDL1_32_B08.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_32_B08_A029 5', mRNA sequence
Length = 767
Score = 238 bits (514), Expect = 4e-062
Identities = 101/126 (80%), Positives = 114/126 (90%)
Frame = +2 / +3
Query: 107 RFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKIDIKR 286
R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKIDI R
Sbjct: 3 RYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKIDIPR 182
Query: 287 VPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQE 466
VPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG I++E
Sbjct: 183 VPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTLIKRE 362
Query: 467 LSKLKK 484
LSKLKK
Sbjct: 363 LSKLKK 380
Score = 144 bits (310), Expect = 5e-034
Identities = 74/125 (59%), Positives = 80/125 (64%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 382 SFFNFESSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASI 203
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 202 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 23
Query: 126 RPIST 112
RPIST
Sbjct: 22 RPIST 8
>gb|BG275750.1|BG275750 NXSI_145_E05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_145_E05 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 509
Score = 237 bits (512), Expect = 7e-062
Identities = 100/129 (77%), Positives = 114/129 (88%)
Frame = +2 / +3
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 108 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 287
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IK G
Sbjct: 288 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKXGTL 467
Query: 455 IRQELSKLK 481
I++ELS K
Sbjct: 468 IKRELSXXK 494
Score = 140 bits (301), Expect = 9e-033
Identities = 73/131 (55%), Positives = 81/131 (61%)
Frame = -1 / -2
Query: 480 FSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKV 301
F ESS LI+ P LILASM F TI+F PHELFSHL TSA S+A IK
Sbjct: 493 FXXESSRLISVPXLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASIKT 314
Query: 300 DFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRP 121
F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRATRP
Sbjct: 313 FFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRP 134
Query: 120 ISTNLLNGILA 88
IST L G+++
Sbjct: 133 IST*RLKGMMS 101
>gb|CR392154.1|CR392154 CR392154 RN Pinus pinaster cDNA clone RN27C03, mRNA sequence
Length = 483
Score = 235 bits (507), Expect = 4e-061
Identities = 98/124 (79%), Positives = 112/124 (90%)
Frame = +2 / +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 110 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 289
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 290 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 469
Query: 455 IRQE 466
I++E
Sbjct: 470 IKRE 481
Score = 139 bits (299), Expect = 2e-032
Identities = 73/127 (57%), Positives = 80/127 (62%)
Frame = -1 / -1
Query: 468 SSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLG 289
SS LI+ PLLILASM F TI+F PHELFSHL TSA SIA IK F G
Sbjct: 483 SSRLISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFG 304
Query: 288 TRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTN 109
T MSIL+SVSES LK I LTI GAST+A FW P*S P* TRATRPIST
Sbjct: 303 TLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST* 124
Query: 108 LLNGILA 88
L G+++
Sbjct: 123 RLKGMMS 103
>gb|BM492300.1|BM492300 NXRV_024_C12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_024_C12 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 538
Score = 232 bits (502), Expect = 2e-060
Identities = 97/123 (78%), Positives = 111/123 (90%)
Frame = +2 / +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 170 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 349
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 350 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 529
Query: 455 IRQ 463
I++
Sbjct: 530 IKR 538
Score = 137 bits (294), Expect = 9e-032
Identities = 71/124 (57%), Positives = 78/124 (62%)
Frame = -1 / -2
Query: 459 LIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGTRL 280
LI+ PLLILASM F TI+F PHELFSHL TSA SIA IK F GT
Sbjct: 534 LISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLG 355
Query: 279 MSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLN 100
MSIL+SVSES LK I LTI GAST+A FW P*S P* TRATRPIST L
Sbjct: 354 MSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLK 175
Query: 99 GILA 88
G+++
Sbjct: 174 GMMS 163
>gb|CX714867.1|CX714867 RTPQ1_27_E03.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_27_E03_A032 5', mRNA sequence
Length = 427
Score = 232 bits (501), Expect = 2e-060
Identities = 97/122 (79%), Positives = 110/122 (90%)
Frame = +2 / +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 62 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 241
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG
Sbjct: 242 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 421
Query: 455 IR 460
I+
Sbjct: 422 IK 427
Score = 137 bits (294), Expect = 9e-032
Identities = 71/124 (57%), Positives = 78/124 (62%)
Frame = -1 / -2
Query: 459 LIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGTRL 280
LI+ PLLILASM F TI+F PHELFSHL TSA SIA IK F GT
Sbjct: 426 LISVPLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLG 247
Query: 279 MSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLN 100
MSIL+SVSES LK I LTI GAST+A FW P*S P* TRATRPIST L
Sbjct: 246 MSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLK 67
Query: 99 GILA 88
G+++
Sbjct: 66 GMMS 55
>gb|AW870058.1|AW870058 NXNV_123_E12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_123_E12 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 384
Score = 228 bits (492), Expect = 4e-059
Identities = 96/124 (77%), Positives = 109/124 (87%)
Frame = +2 / +2
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 8 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 187
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+D +RFK+MLA IK G
Sbjct: 188 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDXERFKIMLAXIKXGXL 367
Query: 455 IRQE 466
I++E
Sbjct: 368 IKRE 379
Score = 133 bits (285), Expect = 2e-030
Identities = 71/126 (56%), Positives = 78/126 (61%)
Frame = -1 / -1
Query: 465 SCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGT 286
S LI+ P LI ASM F TI+F PHELFSHL TSA SIA IK F GT
Sbjct: 378 SRLISXPXLIXASMILNLSXSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGT 199
Query: 285 RLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTNL 106
MSIL+SVSES LK I LTI GAST+A FW P*S P* TRATRPIST
Sbjct: 198 LGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*R 19
Query: 105 LNGILA 88
L G+++
Sbjct: 18 LKGMMS 1
>gb|BF777299.1|BF777299 NXSI_067_E06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_067_E06 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 515
Score = 227 bits (491), Expect = 6e-059
Identities = 97/130 (74%), Positives = 110/130 (84%)
Frame = +2 / +3
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 105 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 284
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGA 454
DI RVPKK LI AME A+V+ +WENS WG+KLIVQK RA L+ F +ML +IKRG
Sbjct: 285 DIPRVPKKKVLIDAMESAEVQKRWENSXWGRKLIVQKXRAELNXXXXFXIMLXKIKRGTL 464
Query: 455 IRQELSKLKK 484
I++ELSKLKK
Sbjct: 465 IKRELSKLKK 494
Score = 144 bits (308), Expect = 1e-033
Identities = 78/133 (58%), Positives = 87/133 (65%)
Frame = -1 / -2
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLIL SM F TI+F PH LFSHL TSA SIA I
Sbjct: 496 SFFNFESSRLISVPLLILXSMXXNXXXSFNSALXFCTINFRPHXLFSHLF*TSADSIASI 317
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRAT 127
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TRAT
Sbjct: 316 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRAT 137
Query: 126 RPISTNLLNGILA 88
RPIST L G+++
Sbjct: 136 RPIST*RLKGMMS 98
>gb|DT635114.1|DT635114 EST1150045 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGD33 3' end, mRNA sequence
Length = 836
Score = 226 bits (489), Expect = 1e-058
Identities = 95/117 (81%), Positives = 106/117 (90%)
Frame = +2 / +1
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 484 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 663
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKR 445
DI RVPKK LI AME A V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKR
Sbjct: 664 DIPRVPKKKVLIDAMESAKVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKR 834
Score = 130 bits (278), Expect = 1e-029
Identities = 67/120 (55%), Positives = 74/120 (61%)
Frame = -1 / -1
Query: 447 PLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSIL 268
PLLILASM F TI+F PHELFSHL T A S+A IK F GT MSIL
Sbjct: 836 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TFADSMASIKTFFFGTLGMSIL 657
Query: 267 MSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILA 88
+SVSES LK I LTI GAST+A FW P*S P* TRATRPIST L G+++
Sbjct: 656 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 477
>gb|CF667184.1|CF667184 RTCNT1_28_E02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_28_E02_A029 5', mRNA sequence
Length = 619
Score = 223 bits (482), Expect = 1e-057
Identities = 93/115 (80%), Positives = 105/115 (91%)
Frame = +2 / +1
Query: 95 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKI 274
MPF+R+VEIGRVALVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKI
Sbjct: 274 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 453
Query: 275 DIKRVPKKSTLIKAMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARI 439
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+I
Sbjct: 454 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKI 618
Score = 127 bits (272), Expect = 9e-029
Identities = 66/117 (56%), Positives = 72/117 (61%)
Frame = -1 / -3
Query: 438 ILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALIKVDFLGTRLMSILMSV 259
ILASM F TI+F PHELFSHL TSA SIA IK F GT MSIL+SV
Sbjct: 617 ILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSILISV 438
Query: 258 SESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTRATRPISTNLLNGILA 88
SES LK I LTI GAST+A FW P*S P* TRATRPIST L G+++
Sbjct: 437 SESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 267
>gb|BX680248.1|BX680248 BX680248 RS Pinus pinaster cDNA clone RS41B10, mRNA sequence
Length = 616
Score = 220 bits (474), Expect = 1e-056
Identities = 93/117 (79%), Positives = 105/117 (89%)
Frame = +2 / +3
Query: 134 LVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQINFKRLSLTDIKIDIKRVPKKSTLIK 313
LVNYG DYG+LVVIVDVVDQNRALVDAP MVR Q+NFKRLSLTDIKIDI RVPKK LI
Sbjct: 39 LVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKIDIPRVPKKKVLID 218
Query: 314 AMEEADVKTKWENSSWGKKLIVQKRRAALSDFDRFKVMLARIKRGGAIRQELSKLKK 484
AME A+V+ +WENSSWG+KLIVQKRRA L+DF+RFK+MLA+IKRG I++ELSKLKK
Sbjct: 219 AMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTLIKRELSKLKK 389
Score = 127 bits (272), Expect = 9e-029
Identities = 67/118 (56%), Positives = 73/118 (61%)
Frame = -1 / -1
Query: 486 AFFSLESSCLIAPPLLILASMTXXXXXXXXXXXLFWTISFLPHELFSHLVFTSASSIALI 307
+FF+ ESS LI+ PLLILASM F TI+F PHELFSHL TSA SIA I
Sbjct: 391 SFFNFESSRLISVPLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASI 212
Query: 306 KVDFLGTRLMSILMSVSESRLKLIWHLTISGASTSALFWXXXXXXXXXRP*SLP*FTR 133
K F GT MSIL+SVSES LK I LTI GAST+A FW P*S P* TR
Sbjct: 211 KTFFFGTLGMSILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTR 38
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 399,773,684
Number of Sequences: 355925
Number of extensions: 5468752
Number of successful extensions: 30184
Number of sequences better than 1.0e-020: 106
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 11538376030
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)