TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.1
(690 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX254201.1|BX254201 BX254201 Pinus pinaster differenciat... 244 4e-064
gb|CR354638.1|CR354638 CR354638 Pinus pinaster differenciat... 244 4e-064
gb|CR354740.1|CR354740 CR354740 Pinus pinaster differenciat... 244 4e-064
gb|BQ290460.1|BQ290460 NXRV046_E07_F NXRV (Nsf Xylem Root w... 243 1e-063
gb|BQ290949.1|BQ290949 NXRV051_G01_F NXRV (Nsf Xylem Root w... 243 1e-063
gb|BQ698941.1|BQ698941 NXRV117_D04_F NXRV (Nsf Xylem Root w... 243 1e-063
gb|BQ702611.1|BQ702611 NXSI_130_E08_F NXSI (Nsf Xylem Side ... 243 1e-063
gb|CX714968.1|CX714968 RTPQ1_28_E12.g1_A032 Roots treated w... 243 1e-063
gb|DR081240.1|DR081240 RTFEPL1_28_G08.b1_A029 Roots plus ad... 243 1e-063
gb|DR096714.1|DR096714 STRR1_29_G01.g1_A033 Stem Response R... 243 1e-063
gb|DR386241.1|DR386241 RTHG1_13_G06.g1_A029 Roots plus adde... 243 1e-063
gb|BQ701629.1|BQ701629 NXSI_111_G08_F NXSI (Nsf Xylem Side ... 240 7e-063
gb|DR687844.1|DR687844 EST1077927 Normalized pine embryo li... 239 1e-062
gb|DT634364.1|DT634364 EST1149295 Normalized pine embryo li... 239 1e-062
gb|AI812834.1|AI812834 19H3 Pine Lambda Zap Xylem library P... 239 2e-062
gb|AL750924.1|AL750924 AL750924 RS Pinus pinaster cDNA clon... 239 2e-062
gb|AL751075.1|AL751075 AL751075 RS Pinus pinaster cDNA clon... 239 2e-062
gb|BX249075.1|BX249075 BX249075 Pinus pinaster differenciat... 239 2e-062
gb|BX249530.1|BX249530 BX249530 Pinus pinaster differenciat... 239 2e-062
gb|BX253410.1|BX253410 BX253410 Pinus pinaster differenciat... 239 2e-062
gb|BX253827.1|BX253827 BX253827 Pinus pinaster differenciat... 239 2e-062
gb|BG040720.1|BG040720 NXSI_114_C09_F NXSI (Nsf Xylem Side ... 239 2e-062
gb|BQ703180.1|BQ703180 NXSI_137_E12_F NXSI (Nsf Xylem Side ... 239 2e-062
gb|CF472547.1|CF472547 RTDS1_10_E04.g1_A015 Drought-stresse... 239 2e-062
gb|CF476158.1|CF476158 RTWW2_21_H04.g1_A021 Well-watered lo... 239 2e-062
gb|CF669131.1|CF669131 RTCNT1_40_G09.g1_A029 Root control P... 239 2e-062
gb|CF670058.1|CF670058 RTCNT1_47_G09.g1_A029 Root control P... 239 2e-062
gb|BX681751.1|BX681751 BX681751 RS Pinus pinaster cDNA clon... 239 2e-062
gb|BX681807.1|BX681807 BX681807 RS Pinus pinaster cDNA clon... 239 2e-062
gb|CR392154.1|CR392154 CR392154 RN Pinus pinaster cDNA clon... 239 2e-062
gb|CR392451.1|CR392451 CR392451 RN Pinus pinaster cDNA clon... 239 2e-062
gb|CX651979.1|CX651979 COLD1_56_D01.b1_A029 Root cold Pinus... 239 2e-062
gb|CX652049.1|CX652049 COLD1_56_D01.g1_A029 Root cold Pinus... 239 2e-062
gb|DR012165.1|DR012165 HEAT1_10_D11.g1_A029 Root at 37 C fo... 239 2e-062
gb|DR119433.1|DR119433 RTMG1_23_F01.b1_A029 Roots minus mag... 239 2e-062
gb|DR119514.1|DR119514 RTMG1_23_F01.g1_A029 Roots minus mag... 239 2e-062
gb|DR742542.1|DR742542 RTCU1_4_G11.g1_A029 Roots plus added... 239 2e-062
gb|BQ701872.1|BQ701872 NXSI_121_F01_F NXSI (Nsf Xylem Side ... 237 4e-062
gb|CF666732.1|CF666732 RTCNT1_25_E11.g1_A029 Root control P... 237 4e-062
gb|BM492300.1|BM492300 NXRV_024_C12_F NXRV (Nsf Xylem Root ... 237 8e-062
gb|BG275750.1|BG275750 NXSI_145_E05_F NXSI (Nsf Xylem Side ... 236 1e-061
gb|CX714867.1|CX714867 RTPQ1_27_E03.g1_A032 Roots treated w... 236 1e-061
gb|BG039583.1|BG039583 NXSI_100_F06_F NXSI (Nsf Xylem Side ... 236 2e-061
gb|AA556860.1|AA556860 702 Loblolly pine C Pinus taeda cDNA... 234 6e-061
gb|AW870058.1|AW870058 NXNV_123_E12_F Nsf Xylem Normal wood... 231 5e-060
gb|DT635114.1|DT635114 EST1150045 Normalized pine embryo li... 231 5e-060
gb|CO172881.1|CO172881 NDL1_32_B08.g1_A029 Needles control ... 230 1e-059
gb|CF667184.1|CF667184 RTCNT1_28_E02.g1_A029 Root control P... 227 5e-059
gb|BF777299.1|BF777299 NXSI_067_E06_F NXSI (Nsf Xylem Side ... 219 1e-056
gb|BG040817.1|BG040817 NXSI_115_D12_F NXSI (Nsf Xylem Side ... 212 2e-054
gb|BX680248.1|BX680248 BX680248 RS Pinus pinaster cDNA clon... 211 3e-054
gb|DR689070.1|DR689070 EST1079156 Normalized pine embryo li... 196 9e-051
gb|CX714815.1|CX714815 RTPQ1_27_E03.b1_A032 Roots treated w... 195 2e-049
gb|BE496277.1|BE496277 NXCI_022_B05_F NXCI (Nsf Xylem Compr... 187 7e-047
gb|DR012095.1|DR012095 HEAT1_10_D11.b1_A029 Root at 37 C fo... 185 2e-046
gb|BX682672.1|BX682672 BX682672 Pinus pinaster differenciat... 184 6e-046
gb|DR168863.1|DR168863 RTPHOS1_28_H04.b1_A029 Roots minus p... 182 2e-045
gb|DR012421.1|DR012421 HEAT1_12_E11.g1_A029 Root at 37 C fo... 181 4e-045
gb|CF667097.1|CF667097 RTCNT1_28_E02.b1_A029 Root control P... 180 1e-044
gb|CO172808.1|CO172808 NDL1_32_B08.b1_A029 Needles control ... 172 2e-042
gb|CF472533.1|CF472533 RTDS1_10_E04.b1_A015 Drought-stresse... 164 5e-040
gb|BG275270.1|BG275270 NXSI_138_F04_F NXSI (Nsf Xylem Side ... 161 4e-039
gb|BQ633914.1|BQ633914 NXRV062_D05_F NXRV (Nsf Xylem Root w... 152 2e-036
gb|AI784911.1|AI784911 1274 PtIFG2 Pinus taeda cDNA clone 9... 147 7e-035
gb|CD027980.1|CD027980 NXNV_143_C09_F Nsf Xylem Normal wood... 147 7e-035
gb|BF609659.1|BF609659 NXSI_047_G06_F NXSI (Nsf Xylem Side ... 146 2e-034
gb|AA739764.1|AA739764 529 PtIFG2 Pinus taeda cDNA clone 88... 145 3e-034
gb|BQ698581.1|BQ698581 NXPV_071_F06_F NXPV (Nsf Xylem Plani... 140 8e-033
gb|AI725054.1|AI725054 953 PtIFG2 Pinus taeda cDNA clone 88... 108 3e-030
gb|AA739890.1|AA739890 655 PtIFG2 Pinus taeda cDNA clone 90... 131 6e-030
gb|BE758746.1|BE758746 NXCI_060_E06_F NXCI (Nsf Xylem Compr... 125 3e-028
gb|BE241224.1|BE241224 NXNV_180_G04_F Nsf Xylem Normal wood... 123 1e-027
gb|BE123630.1|BE123630 NXNV_146_H12_F Nsf Xylem Normal wood... 121 5e-027
gb|BE643949.1|BE643949 NXCI_050_E12_F NXCI (Nsf Xylem Compr... 115 4e-025
gb|CD021455.1|CD021455 NXNV_145_A10_F Nsf Xylem Normal wood... 111 4e-024
>gb|BX254201.1|BX254201 BX254201 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP094G06, mRNA sequence
Length = 677
Score = 244 bits (528), Expect = 4e-064
Identities = 100/126 (79%), Positives = 115/126 (91%)
Frame = +1 / +3
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 90 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 269
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI RVPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 270 KIDIPRVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 449
Query: 424 GAIRQE 441
I++E
Sbjct: 450 TLIKRE 467
Score = 159 bits (341), Expect = 2e-038
Identities = 76/124 (61%), Positives = 90/124 (72%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 457 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 278
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 277 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 98
Query: 71 ILAA 60
++A+
Sbjct: 97 MVAS 86
>gb|CR354638.1|CR354638 CR354638 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 124C07, mRNA sequence
Length = 638
Score = 244 bits (528), Expect = 4e-064
Identities = 100/126 (79%), Positives = 115/126 (91%)
Frame = +1 / +2
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 92 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 271
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI RVPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 272 KIDIPRVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 451
Query: 424 GAIRQE 441
I++E
Sbjct: 452 TLIKRE 469
Score = 159 bits (341), Expect = 2e-038
Identities = 76/124 (61%), Positives = 90/124 (72%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 459 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 280
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 279 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 100
Query: 71 ILAA 60
++A+
Sbjct: 99 MVAS 88
>gb|CR354740.1|CR354740 CR354740 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 125G11, mRNA sequence
Length = 631
Score = 244 bits (528), Expect = 4e-064
Identities = 100/126 (79%), Positives = 115/126 (91%)
Frame = +1 / +3
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 90 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 269
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI RVPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 270 KIDIPRVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 449
Query: 424 GAIRQE 441
I++E
Sbjct: 450 TLIKRE 467
Score = 159 bits (341), Expect = 2e-038
Identities = 76/124 (61%), Positives = 90/124 (72%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 457 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 278
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 277 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 98
Query: 71 ILAA 60
++A+
Sbjct: 97 MVAS 86
>gb|BQ290460.1|BQ290460 NXRV046_E07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV046_E07 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 540
Score = 243 bits (525), Expect = 1e-063
Identities = 99/126 (78%), Positives = 115/126 (91%)
Frame = +1 / +1
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 49 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 228
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 229 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 408
Query: 424 GAIRQE 441
I++E
Sbjct: 409 TLIKRE 426
Score = 158 bits (340), Expect = 3e-038
Identities = 76/123 (61%), Positives = 89/123 (72%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 416 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 237
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 236 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 57
Query: 71 ILA 63
++A
Sbjct: 56 MVA 48
>gb|BQ290949.1|BQ290949 NXRV051_G01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV051_G01 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 536
Score = 243 bits (525), Expect = 1e-063
Identities = 99/126 (78%), Positives = 115/126 (91%)
Frame = +1 / +1
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 49 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 228
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 229 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 408
Query: 424 GAIRQE 441
I++E
Sbjct: 409 TLIKRE 426
Score = 159 bits (341), Expect = 2e-038
Identities = 76/124 (61%), Positives = 90/124 (72%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 416 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 237
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 236 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 57
Query: 71 ILAA 60
++A+
Sbjct: 56 MVAS 45
>gb|BQ698941.1|BQ698941 NXRV117_D04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV117_D04 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 512
Score = 243 bits (525), Expect = 1e-063
Identities = 99/126 (78%), Positives = 115/126 (91%)
Frame = +1 / +3
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 51 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 230
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 231 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 410
Query: 424 GAIRQE 441
I++E
Sbjct: 411 TLIKRE 428
Score = 159 bits (341), Expect = 2e-038
Identities = 76/124 (61%), Positives = 90/124 (72%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 418 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 239
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 238 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 59
Query: 71 ILAA 60
++A+
Sbjct: 58 MVAS 47
>gb|BQ702611.1|BQ702611 NXSI_130_E08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_130_E08 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 479
Score = 243 bits (525), Expect = 1e-063
Identities = 99/126 (78%), Positives = 115/126 (91%)
Frame = +1 / +3
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 60 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 239
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 240 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 419
Query: 424 GAIRQE 441
I++E
Sbjct: 420 TLIKRE 437
Score = 159 bits (341), Expect = 2e-038
Identities = 76/124 (61%), Positives = 90/124 (72%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 427 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 248
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 247 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 68
Query: 71 ILAA 60
++A+
Sbjct: 67 MVAS 56
>gb|CX714968.1|CX714968 RTPQ1_28_E12.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_28_E12_A032 5', mRNA sequence
Length = 847
Score = 243 bits (525), Expect = 1e-063
Identities = 99/126 (78%), Positives = 115/126 (91%)
Frame = +1 / +3
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 42 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 221
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 222 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 401
Query: 424 GAIRQE 441
I++E
Sbjct: 402 TLIKRE 419
Score = 159 bits (341), Expect = 2e-038
Identities = 76/124 (61%), Positives = 90/124 (72%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 409 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 230
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 229 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 50
Query: 71 ILAA 60
++A+
Sbjct: 49 MVAS 38
>gb|DR081240.1|DR081240 RTFEPL1_28_G08.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_28_G08_A029 3', mRNA sequence
Length = 669
Score = 243 bits (525), Expect = 1e-063
Identities = 99/126 (78%), Positives = 115/126 (91%)
Frame = +1 / -3
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 529 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 350
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 349 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 170
Query: 424 GAIRQE 441
I++E
Sbjct: 169 TLIKRE 152
Score = 159 bits (341), Expect = 2e-038
Identities = 76/124 (61%), Positives = 90/124 (72%)
Frame = -2 / +3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 162 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 341
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 342 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 521
Query: 71 ILAA 60
++A+
Sbjct: 522 MVAS 533
>gb|DR096714.1|DR096714 STRR1_29_G01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_29_G01_A033 5', mRNA sequence
Length = 708
Score = 243 bits (525), Expect = 1e-063
Identities = 99/126 (78%), Positives = 115/126 (91%)
Frame = +1 / +2
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 2 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 181
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 182 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 361
Query: 424 GAIRQE 441
I++E
Sbjct: 362 TLIKRE 379
Score = 158 bits (340), Expect = 3e-038
Identities = 76/123 (61%), Positives = 89/123 (72%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 369 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 190
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 189 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 10
Query: 71 ILA 63
++A
Sbjct: 9 MVA 1
>gb|DR386241.1|DR386241 RTHG1_13_G06.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_G06_A029 5', mRNA sequence
Length = 713
Score = 243 bits (525), Expect = 1e-063
Identities = 99/126 (78%), Positives = 115/126 (91%)
Frame = +1 / +3
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 15 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 194
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 195 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRG 374
Query: 424 GAIRQE 441
I++E
Sbjct: 375 TLIKRE 392
Score = 159 bits (341), Expect = 2e-038
Identities = 76/124 (61%), Positives = 90/124 (72%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 382 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 203
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 202 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 23
Query: 71 ILAA 60
++A+
Sbjct: 22 MVAS 11
>gb|BQ701629.1|BQ701629 NXSI_111_G08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_111_G08 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 541
Score = 240 bits (519), Expect = 7e-063
Identities = 98/126 (77%), Positives = 114/126 (90%)
Frame = +1 / +3
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 48 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 227
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIK G
Sbjct: 228 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKXG 407
Query: 424 GAIRQE 441
I++E
Sbjct: 408 TLIKRE 425
Score = 156 bits (336), Expect = 1e-037
Identities = 75/124 (60%), Positives = 89/124 (71%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ P LI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 415 MSVPXLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 236
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 235 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 56
Query: 71 ILAA 60
++A+
Sbjct: 55 MVAS 44
>gb|DR687844.1|DR687844 EST1077927 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABX25 3' end, mRNA sequence
Length = 841
Score = 239 bits (517), Expect = 1e-062
Identities = 97/123 (78%), Positives = 113/123 (91%)
Frame = +1 / +3
Query: 73 PFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKID 252
PF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDIKID
Sbjct: 159 PFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDIKID 338
Query: 253 IKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAI 432
I +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG I
Sbjct: 339 IPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTLI 518
Query: 433 RQE 441
++E
Sbjct: 519 KRE 527
Score = 155 bits (334), Expect = 2e-037
Identities = 75/120 (62%), Positives = 86/120 (71%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 517 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 338
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 337 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 158
>gb|DT634364.1|DT634364 EST1149295 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG518 3' end, mRNA sequence
Length = 803
Score = 239 bits (517), Expect = 1e-062
Identities = 97/123 (78%), Positives = 113/123 (91%)
Frame = +1 / +2
Query: 73 PFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKID 252
PF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDIKID
Sbjct: 167 PFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDIKID 346
Query: 253 IKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAI 432
I +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG I
Sbjct: 347 IPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTLI 526
Query: 433 RQE 441
++E
Sbjct: 527 KRE 535
Score = 155 bits (334), Expect = 2e-037
Identities = 75/120 (62%), Positives = 86/120 (71%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ PLLI A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 525 MSVPLLILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 346
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 345 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 166
>gb|AI812834.1|AI812834 19H3 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 573
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +1
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 34 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 213
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 214 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 393
Query: 430 IRQE 441
I++E
Sbjct: 394 IKRE 405
Score = 160 bits (343), Expect = 1e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 386 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 207
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 206 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 27
>gb|AL750924.1|AL750924 AL750924 RS Pinus pinaster cDNA clone RS02A09 similar to RP L14,
mRNA sequence
Length = 596
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +1
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 112 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 291
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 292 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 471
Query: 430 IRQE 441
I++E
Sbjct: 472 IKRE 483
Score = 160 bits (343), Expect = 1e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -1
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 464 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 285
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 284 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 105
>gb|AL751075.1|AL751075 AL751075 RS Pinus pinaster cDNA clone RS03G08 similar to RP L14,
mRNA sequence
Length = 605
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +3
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 102 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 281
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 282 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 461
Query: 430 IRQE 441
I++E
Sbjct: 462 IKRE 473
Score = 158 bits (339), Expect = 4e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 454 PLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 275
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 274 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 95
>gb|BX249075.1|BX249075 BX249075 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP015C05 similar to 60S RIBOSOMAL PROTEIN
L14, mRNA sequence
Length = 651
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +2
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 107 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 286
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 287 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 466
Query: 430 IRQE 441
I++E
Sbjct: 467 IKRE 478
Score = 158 bits (339), Expect = 4e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -1
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 459 PLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 280
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 279 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 100
>gb|BX249530.1|BX249530 BX249530 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP025B05 similar to 60S RIBOSOMAL PROTEIN
L14, mRNA sequence
Length = 673
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +2
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 161 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 340
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 341 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 520
Query: 430 IRQE 441
I++E
Sbjct: 521 IKRE 532
Score = 158 bits (339), Expect = 4e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 513 PLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 334
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 333 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 154
>gb|BX253410.1|BX253410 BX253410 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP083B09 similar to 60S RIBOSOMAL PROTEIN
L14, mRNA sequence
Length = 688
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +3
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 75 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 254
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 255 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 434
Query: 430 IRQE 441
I++E
Sbjct: 435 IKRE 446
Score = 158 bits (339), Expect = 4e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -1
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 427 PLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 248
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 247 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 68
>gb|BX253827.1|BX253827 BX253827 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP089B08 similar to 60S RIBOSOMAL PROTEIN
L14, mRNA sequence
Length = 686
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +3
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 108 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 287
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 288 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAQLNDFERFKIMLAKIKRGTL 467
Query: 430 IRQE 441
I++E
Sbjct: 468 IKRE 479
Score = 158 bits (339), Expect = 4e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 460 PLLILASMILNLSKSFN*ALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 281
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 280 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 101
>gb|BG040720.1|BG040720 NXSI_114_C09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_114_C09 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 537
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +3
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 33 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 212
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 213 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 392
Query: 430 IRQE 441
I++E
Sbjct: 393 IKRE 404
Score = 160 bits (343), Expect = 1e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -3
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 385 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 206
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 205 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 26
>gb|BQ703180.1|BQ703180 NXSI_137_E12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_137_E12 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 539
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +3
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 33 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 212
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 213 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 392
Query: 430 IRQE 441
I++E
Sbjct: 393 IKRE 404
Score = 160 bits (343), Expect = 1e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 385 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 206
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 205 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 26
>gb|CF472547.1|CF472547 RTDS1_10_E04.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_10_E04_A015 5', mRNA sequence
Length = 772
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +1
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 160 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 339
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 340 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 519
Query: 430 IRQE 441
I++E
Sbjct: 520 IKRE 531
Score = 158 bits (340), Expect = 3e-038
Identities = 78/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -3
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA S+A I FFGT MSIL
Sbjct: 512 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASIKTFFFGTLGMSIL 333
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 332 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 153
>gb|CF476158.1|CF476158 RTWW2_21_H04.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_21_H04_A021 5', mRNA sequence
Length = 767
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +1
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 79 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 258
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 259 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 438
Query: 430 IRQE 441
I++E
Sbjct: 439 IKRE 450
Score = 158 bits (340), Expect = 3e-038
Identities = 78/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -1
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA S+A I FFGT MSIL
Sbjct: 431 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASIKTFFFGTLGMSIL 252
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 251 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 72
>gb|CF669131.1|CF669131 RTCNT1_40_G09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_40_G09_A029 5', mRNA sequence
Length = 755
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +1
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 145 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 324
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 325 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 504
Query: 430 IRQE 441
I++E
Sbjct: 505 IKRE 516
Score = 158 bits (340), Expect = 3e-038
Identities = 78/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -1
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA S+A I FFGT MSIL
Sbjct: 497 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASIKTFFFGTLGMSIL 318
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 317 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 138
>gb|CF670058.1|CF670058 RTCNT1_47_G09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_47_G09_A029 5', mRNA sequence
Length = 730
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +2
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 116 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 295
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 296 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 475
Query: 430 IRQE 441
I++E
Sbjct: 476 IKRE 487
Score = 158 bits (340), Expect = 3e-038
Identities = 78/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA S+A I FFGT MSIL
Sbjct: 468 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASIKTFFFGTLGMSIL 289
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 288 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 109
>gb|BX681751.1|BX681751 BX681751 RS Pinus pinaster cDNA clone RS63H06, mRNA sequence
Length = 601
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +2
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 23 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 202
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 203 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 382
Query: 430 IRQE 441
I++E
Sbjct: 383 IKRE 394
Score = 160 bits (343), Expect = 1e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 375 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 196
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 195 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 16
>gb|BX681807.1|BX681807 BX681807 RS Pinus pinaster cDNA clone RS65B08, mRNA sequence
Length = 522
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +3
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 108 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 287
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 288 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 467
Query: 430 IRQE 441
I++E
Sbjct: 468 IKRE 479
Score = 160 bits (343), Expect = 1e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -3
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 460 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 281
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 280 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 101
>gb|CR392154.1|CR392154 CR392154 RN Pinus pinaster cDNA clone RN27C03, mRNA sequence
Length = 483
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +2
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 110 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 289
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 290 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 469
Query: 430 IRQE 441
I++E
Sbjct: 470 IKRE 481
Score = 160 bits (343), Expect = 1e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -1
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 462 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 283
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 282 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 103
>gb|CR392451.1|CR392451 CR392451 RN Pinus pinaster cDNA clone RN32C02, mRNA sequence
Length = 537
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +1
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 112 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 291
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 292 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 471
Query: 430 IRQE 441
I++E
Sbjct: 472 IKRE 483
Score = 160 bits (343), Expect = 1e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 464 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 285
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 284 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 105
>gb|CX651979.1|CX651979 COLD1_56_D01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_D01_A029 3', mRNA sequence
Length = 693
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / -2
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 572 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 393
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 392 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 213
Query: 430 IRQE 441
I++E
Sbjct: 212 IKRE 201
Score = 158 bits (340), Expect = 3e-038
Identities = 78/120 (65%), Positives = 88/120 (73%)
Frame = -2 / +1
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA S+A I FFGT MSIL
Sbjct: 220 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASIKTFFFGTLGMSIL 399
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 400 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 579
>gb|CX652049.1|CX652049 COLD1_56_D01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_D01_A029 5', mRNA sequence
Length = 762
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / -1
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 654 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 475
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 474 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 295
Query: 430 IRQE 441
I++E
Sbjct: 294 IKRE 283
Score = 158 bits (340), Expect = 3e-038
Identities = 78/120 (65%), Positives = 88/120 (73%)
Frame = -2 / +2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA S+A I FFGT MSIL
Sbjct: 302 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASIKTFFFGTLGMSIL 481
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 482 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 661
>gb|DR012165.1|DR012165 HEAT1_10_D11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_10_D11_A029 5', mRNA sequence
Length = 775
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +3
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 240 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 419
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 420 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 599
Query: 430 IRQE 441
I++E
Sbjct: 600 IKRE 611
Score = 160 bits (343), Expect = 1e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -1
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 592 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 413
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 412 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 233
>gb|DR119433.1|DR119433 RTMG1_23_F01.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_F01_A029 3', mRNA sequence
Length = 762
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +3
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 54 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 233
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 234 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 413
Query: 430 IRQE 441
I++E
Sbjct: 414 IKRE 425
Score = 158 bits (340), Expect = 3e-038
Identities = 78/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -3
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA S+A I FFGT MSIL
Sbjct: 406 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASIKTFFFGTLGMSIL 227
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 226 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 47
>gb|DR119514.1|DR119514 RTMG1_23_F01.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_F01_A029 5', mRNA sequence
Length = 770
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / +2
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 122 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 301
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 302 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 481
Query: 430 IRQE 441
I++E
Sbjct: 482 IKRE 493
Score = 158 bits (340), Expect = 3e-038
Identities = 78/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -3
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA S+A I FFGT MSIL
Sbjct: 474 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASIKTFFFGTLGMSIL 295
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 294 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 115
>gb|DR742542.1|DR742542 RTCU1_4_G11.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_4_G11_A029 5', mRNA sequence
Length = 806
Score = 239 bits (516), Expect = 2e-062
Identities = 100/124 (80%), Positives = 112/124 (90%)
Frame = +1 / -3
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 714 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 535
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 534 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 355
Query: 430 IRQE 441
I++E
Sbjct: 354 IKRE 343
Score = 160 bits (343), Expect = 1e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / +2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 362 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 541
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 542 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 721
>gb|BQ701872.1|BQ701872 NXSI_121_F01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_121_F01 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 552
Score = 237 bits (513), Expect = 4e-062
Identities = 97/126 (76%), Positives = 113/126 (89%)
Frame = +1 / +1
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 58 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 237
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKI G
Sbjct: 238 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIXXG 417
Query: 424 GAIRQE 441
I++E
Sbjct: 418 TLIKRE 435
Score = 154 bits (331), Expect = 6e-037
Identities = 74/124 (59%), Positives = 88/124 (70%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ P I A+M LN SKS + AL F TI+F PHEL SHL TSA+S+A I FFGT +
Sbjct: 425 MSVPXXILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGI 246
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 245 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 66
Query: 71 ILAA 60
++A+
Sbjct: 65 MVAS 54
>gb|CF666732.1|CF666732 RTCNT1_25_E11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_25_E11_A029 5', mRNA sequence
Length = 727
Score = 237 bits (513), Expect = 4e-062
Identities = 99/124 (79%), Positives = 112/124 (90%)
Frame = +1 / +2
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDI+I
Sbjct: 140 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIRI 319
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 320 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 499
Query: 430 IRQE 441
I++E
Sbjct: 500 IKRE 511
Score = 158 bits (340), Expect = 3e-038
Identities = 78/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA S+A I FFGT MSIL
Sbjct: 492 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASIKTFFFGTLGMSIL 313
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 312 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 133
>gb|BM492300.1|BM492300 NXRV_024_C12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_024_C12 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 538
Score = 237 bits (511), Expect = 8e-062
Identities = 99/123 (80%), Positives = 111/123 (90%)
Frame = +1 / +2
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 170 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 349
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 350 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 529
Query: 430 IRQ 438
I++
Sbjct: 530 IKR 538
Score = 160 bits (343), Expect = 1e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 522 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 343
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 342 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 163
>gb|BG275750.1|BG275750 NXSI_145_E05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_145_E05 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 509
Score = 236 bits (510), Expect = 1e-061
Identities = 99/124 (79%), Positives = 111/124 (89%)
Frame = +1 / +3
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 108 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 287
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIK G
Sbjct: 288 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKXGTL 467
Query: 430 IRQE 441
I++E
Sbjct: 468 IKRE 479
Score = 156 bits (335), Expect = 2e-037
Identities = 77/120 (64%), Positives = 87/120 (72%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
P LI A+M LNLSKS + AL F TI+F PHELFSHL TSA S+A I FFGT MSIL
Sbjct: 460 PXLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSMASIKTFFFGTLGMSIL 281
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 280 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 101
>gb|CX714867.1|CX714867 RTPQ1_27_E03.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_27_E03_A032 5', mRNA sequence
Length = 427
Score = 236 bits (510), Expect = 1e-061
Identities = 99/122 (81%), Positives = 110/122 (90%)
Frame = +1 / +2
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 62 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 241
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG
Sbjct: 242 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTL 421
Query: 430 IR 435
I+
Sbjct: 422 IK 427
Score = 160 bits (343), Expect = 1e-038
Identities = 79/120 (65%), Positives = 88/120 (73%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 414 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 235
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 234 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 55
>gb|BG039583.1|BG039583 NXSI_100_F06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_100_F06 5' similar to Arabidopsis thaliana
sequence At2g20450 60S ribosomal protein L14 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 500
Score = 236 bits (509), Expect = 2e-061
Identities = 96/126 (76%), Positives = 112/126 (88%)
Frame = +1 / +1
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 37 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 216
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRG 423
KIDI +VPKK LI+ ME A+V+ +W+NSSWG+KLIVQKRRA LNDF+RFK+MLAKI G
Sbjct: 217 KIDIPKVPKKKVLIEXMEAAEVQKRWDNSSWGRKLIVQKRRAELNDFERFKIMLAKIXXG 396
Query: 424 GAIRQE 441
I++E
Sbjct: 397 TLIKRE 414
Score = 152 bits (327), Expect = 2e-036
Identities = 73/124 (58%), Positives = 87/124 (70%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
M+ P I A+M LN SKS + AL F TI+F PHEL SHL TSA+S+ I FFGT +
Sbjct: 404 MSVPXXILASMILNRSKSFNSALRFCTINFRPHELLSHLF*TSAASMXSIKTFFFGTLGI 225
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFIW T+ GAST+A FWSTTST+TT P S P* RATRPIS L G
Sbjct: 224 SILISVSESLLKFIWHLTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKG 45
Query: 71 ILAA 60
++A+
Sbjct: 44 MVAS 33
>gb|AA556860.1|AA556860 702 Loblolly pine C Pinus taeda cDNA clone 6C7E, mRNA sequence
Length = 589
Score = 234 bits (505), Expect = 6e-061
Identities = 98/124 (79%), Positives = 110/124 (88%)
Frame = +1 / +3
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 96 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 275
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKI +G
Sbjct: 276 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIXKGXL 455
Query: 430 IRQE 441
I +E
Sbjct: 456 IXRE 467
Score = 155 bits (334), Expect = 2e-037
Identities = 77/123 (62%), Positives = 88/123 (71%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
++ P I A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT M
Sbjct: 457 ISXPFXILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGM 278
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SIL+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G
Sbjct: 277 SILISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKG 98
Query: 71 ILA 63
+++
Sbjct: 97 MMS 89
>gb|AW870058.1|AW870058 NXNV_123_E12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_123_E12 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 384
Score = 231 bits (498), Expect = 5e-060
Identities = 97/124 (78%), Positives = 109/124 (87%)
Frame = +1 / +2
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 8 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 187
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LND +RFK+MLA IK G
Sbjct: 188 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDXERFKIMLAXIKXGXL 367
Query: 430 IRQE 441
I++E
Sbjct: 368 IKRE 379
Score = 154 bits (331), Expect = 6e-037
Identities = 77/120 (64%), Positives = 86/120 (71%)
Frame = -2 / -1
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
P LI A+M LNLS S + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 360 PXLIXASMILNLSXSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 181
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 180 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 1
>gb|DT635114.1|DT635114 EST1150045 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGD33 3' end, mRNA sequence
Length = 836
Score = 231 bits (498), Expect = 5e-060
Identities = 97/117 (82%), Positives = 106/117 (90%)
Frame = +1 / +1
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 484 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 663
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
DI RVPKK LI AME A V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKR
Sbjct: 664 DIPRVPKKKVLIDAMESAKVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKR 834
Score = 155 bits (334), Expect = 2e-037
Identities = 77/120 (64%), Positives = 87/120 (72%)
Frame = -2 / -1
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL T A S+A I FFGT MSIL
Sbjct: 836 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TFADSMASIKTFFFGTLGMSIL 657
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 656 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 477
>gb|CO172881.1|CO172881 NDL1_32_B08.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_32_B08_A029 5', mRNA sequence
Length = 767
Score = 230 bits (496), Expect = 1e-059
Identities = 97/120 (80%), Positives = 108/120 (90%)
Frame = +1 / +3
Query: 82 RFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKIDIKR 261
R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKIDI R
Sbjct: 3 RYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKIDIPR 182
Query: 262 VPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQE 441
VPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKIKRG I++E
Sbjct: 183 VPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKIKRGTLIKRE 362
Score = 156 bits (335), Expect = 2e-037
Identities = 77/112 (68%), Positives = 83/112 (74%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL
Sbjct: 343 PLLILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSIL 164
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPIST 87
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST
Sbjct: 163 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST 8
>gb|CF667184.1|CF667184 RTCNT1_28_E02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_28_E02_A029 5', mRNA sequence
Length = 619
Score = 227 bits (491), Expect = 5e-059
Identities = 95/115 (82%), Positives = 105/115 (91%)
Frame = +1 / +1
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 274 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 453
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
DI RVPKK LI AME A+V+ +WENSSWG+KLIVQKRRA LNDF+RFK+MLAKI
Sbjct: 454 DIPRVPKKKVLIDAMESAEVQKRWENSSWGRKLIVQKRRAELNDFERFKIMLAKI 618
Score = 153 bits (328), Expect = 1e-036
Identities = 76/117 (64%), Positives = 85/117 (72%)
Frame = -2 / -3
Query: 413 IFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSV 234
I A+M LNLSKS + AL F TI+F PHELFSHL TSA SIA I FFGT MSIL+SV
Sbjct: 617 ILASMILNLSKSFNSALRFCTINFRPHELFSHLF*TSADSIASIKTFFFGTLGMSILISV 438
Query: 233 RESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 437 SESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 267
>gb|BF777299.1|BF777299 NXSI_067_E06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_067_E06 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 515
Score = 219 bits (473), Expect = 1e-056
Identities = 93/124 (75%), Positives = 104/124 (83%)
Frame = +1 / +3
Query: 70 MPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDIKI 249
MPF+R+VEIGRVALVNYG +YG+LVVIVDVVDQNRALVDAP MVR QMNFKRLSLTDIKI
Sbjct: 105 MPFRRYVEIGRVALVNYGPDYGKLVVIVDVVDQNRALVDAPKMVRSQMNFKRLSLTDIKI 284
Query: 250 DIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGA 429
DI RVPKK LI AME A+V+ +WENS WG+KLIVQK RA LN F +ML KIKRG
Sbjct: 285 DIPRVPKKKVLIDAMESAEVQKRWENSXWGRKLIVQKXRAELNXXXXFXIMLXKIKRGTL 464
Query: 430 IRQE 441
I++E
Sbjct: 465 IKRE 476
Score = 147 bits (315), Expect = 9e-035
Identities = 73/120 (60%), Positives = 82/120 (68%)
Frame = -2 / -2
Query: 422 PLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSIL 243
PLLI +M N S + AL F TI+F PH LFSHL TSA SIA I FFGT MSIL
Sbjct: 457 PLLILXSMXXNXXXSFNSALXFCTINFRPHXLFSHLF*TSADSIASIKTFFFGTLGMSIL 278
Query: 242 MSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILA 63
+SV ES LKFI T+ GAST A FWSTTST+TT P S P* TRATRPIST L G+++
Sbjct: 277 ISVSESLLKFI*DLTIFGASTNARFWSTTSTITTSFP*SGP*LTRATRPIST*RLKGMMS 98
>gb|BG040817.1|BG040817 NXSI_115_D12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_115_D12 5' similar to Arabidopsis thaliana
sequence At4g27090 ribosomal protein L14 -like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 388
Score = 212 bits (457), Expect = 2e-054
Identities = 86/107 (80%), Positives = 98/107 (91%)
Frame = +1 / +3
Query: 64 AKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTDI 243
A MPF+RF+EIGRVAL+NYG +YG+LVVIVDVVDQNRALVDAP MVRCQMNFKRLSLTDI
Sbjct: 48 ATMPFRRFIEIGRVALINYGPDYGKLVVIVDVVDQNRALVDAPKMVRCQMNFKRLSLTDI 227
Query: 244 KIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDF 384
KIDI +VPKK LI+AME A+V+ +W+NSSWG+KLIVQKRRA LNDF
Sbjct: 228 KIDIPKVPKKKVLIEAMEAAEVQKRWDNSSWGRKLIVQKRRAELNDF 368
Score = 138 bits (297), Expect = 3e-032
Identities = 66/108 (61%), Positives = 78/108 (72%)
Frame = -2 / -1
Query: 383 KSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLMSILMSVRESRLKFIWQ 204
KS + AL F TI+F PHEL SHL TSA+S+A I FFGT +SIL+SV ES LKFIW
Sbjct: 367 KSFNSALRFCTINFRPHELLSHLF*TSAASMASIKTFFFGTLGISILISVSESLLKFIWH 188
Query: 203 RTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNGILAA 60
T+ GAST+A FWSTTST+TT P S P* RATRPIS L G++A+
Sbjct: 187 LTILGASTKARFWSTTSTITTSFP*SGP*LMRATRPISIKRLKGMVAS 44
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 311,166,984
Number of Sequences: 355925
Number of extensions: 3502731
Number of successful extensions: 25706
Number of sequences better than 1.0e-020: 106
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9543423165
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)