TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716323.2.2
(764 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO201211.1|CO201211 RTCNT2_4_G07.b1_A029 Root control 2 ... 310 6e-084
gb|CX653107.1|CX653107 COLD1_63_A08.g1_A029 Root cold Pinus... 307 8e-083
gb|DR101710.1|DR101710 STRR1_75_F02.b1_A033 Stem Response R... 296 2e-079
gb|DR052644.1|DR052644 RTCA1_5_H11.g1_A029 Roots minus calc... 294 4e-079
gb|CV033633.1|CV033633 RTNACL1_35_E05.g1_A029 Roots plus ad... 290 7e-078
gb|DR052598.1|DR052598 RTCA1_5_D09.g1_A029 Roots minus calc... 290 7e-078
gb|DR024373.1|DR024373 STRS1_64_C04.g1_A034 Shoot tip pitch... 267 5e-071
gb|DR018150.1|DR018150 STRS1_20_F09.g1_A034 Shoot tip pitch... 258 3e-068
gb|DR052520.1|DR052520 RTCA1_5_D09.b1_A029 Roots minus calc... 251 4e-066
gb|DR052557.1|DR052557 RTCA1_5_H11.b1_A029 Roots minus calc... 251 4e-066
gb|DR111859.1|DR111859 RTS1_20_F02.g1_A029 Roots minus sulf... 251 4e-066
gb|BQ107732.1|BQ107732 NXLV103_F06_F NXLV (Nsf Xylem Late w... 250 1e-065
gb|CF473581.1|CF473581 RTWW2_3_F07.g1_A021 Well-watered lob... 244 4e-064
gb|DR017244.1|DR017244 STRS1_15_B04.b1_A034 Shoot tip pitch... 244 4e-064
gb|DR048277.1|DR048277 RTBOR1_7_E05.g2_A029 Roots plus adde... 244 4e-064
gb|DR016509.1|DR016509 STRS1_10_C03.g1_A034 Shoot tip pitch... 242 2e-063
gb|DR079274.1|DR079274 RTFEPL1_10_F01.b1_A029 Roots plus ad... 241 5e-063
gb|CO367090.1|CO367090 RTK1_32_C09.b1_A029 Roots minus pota... 239 2e-062
dbj|BD224542.1| Materials and methods for the modification ... 237 5e-062
gb|CF402601.1|CF402601 RTWW1_21_D04.g1_A015 Well-watered lo... 236 1e-061
gb|CO362125.1|CO362125 RTK1_1_A01.g1_A029 Roots minus potas... 232 3e-060
gb|DR742648.1|DR742648 RTCU1_5_D01.g2_A029 Roots plus added... 230 8e-060
gb|CF402026.1|CF402026 RTWW1_16_B04.g1_A015 Well-watered lo... 229 2e-059
gb|CF473738.1|CF473738 RTWW2_4_E01.g1_A021 Well-watered lob... 229 2e-059
gb|U12013.1|PTU12013 Pinus taeda PT4CL2 4-coumarate-CoA lig... 177 6e-059
dbj|BD224332.1| Materials and methods for the modification ... 177 6e-059
dbj|BD224366.1| Materials and methods for the modification ... 177 6e-059
dbj|BD272988.1| Materials and methods for the modification ... 177 6e-059
gb|DR092999.1|DR092999 STRR1_5_A01.g1_A033 Stem Response Re... 177 6e-059
gb|DR092921.1|DR092921 STRR1_5_A01.b1_A033 Stem Response Re... 177 6e-059
gb|DR069800.1|DR069800 RTDK1_9_B09.g1_A029 Roots, dark Pinu... 177 6e-059
gb|CO201630.1|CO201630 RTCNT2_7_C08.b1_A029 Root control 2 ... 177 6e-059
gb|CO201703.1|CO201703 RTCNT2_7_C08.g1_A029 Root control 2 ... 177 6e-059
gb|CO166419.1|CO166419 FLD1_61_H04.g1_A029 Root flooded Pin... 177 6e-059
gb|DR744549.1|DR744549 RTCU1_23_E12.b1_A029 Roots plus adde... 177 6e-059
gb|DR019282.1|DR019282 STRS1_28_H10.g1_A034 Shoot tip pitch... 177 6e-059
gb|DR101975.1|DR101975 STRR1_77_E04.b1_A033 Stem Response R... 177 6e-059
gb|CO159169.1|CO159169 FLD1_11_H06.g1_A029 Root flooded Pin... 177 6e-059
gb|CF402273.1|CF402273 RTWW1_19_G06.g1_A015 Well-watered lo... 177 6e-059
gb|CF399865.1|CF399865 RTWW1_1_F04.g1_A015 Well-watered lob... 177 6e-059
gb|U12012.1|PTU12012 Pinus taeda PT4CL1 4-coumarate-CoA lig... 177 9e-059
gb|CX645793.1|CX645793 COLD1_5_G11.b1_A029 Root cold Pinus ... 226 1e-058
gb|BX784216.1|BX784216 BX784216 Pinus pinaster differenciat... 176 2e-058
gb|DR079127.1|DR079127 RTFEPL1_9_F05.b1_A029 Roots plus add... 225 3e-058
gb|DR116726.1|DR116726 RTMG1_2_A01.g1_A029 Roots minus magn... 177 3e-058
gb|DR019194.1|DR019194 STRS1_28_H10.b2_A034 Shoot tip pitch... 175 4e-058
gb|CO362045.1|CO362045 NDL2_8_G01.g1_A029 Needles control 2... 174 8e-058
gb|CV032697.1|CV032697 RTNACL1_17_F12.g1_A029 Roots plus ad... 174 8e-058
gb|DR101893.1|DR101893 STRR1_76_C02.g1_A033 Stem Response R... 174 8e-058
gb|CF401996.1|CF401996 RTWW1_16_D03.g1_A015 Well-watered lo... 173 1e-057
gb|DR742979.1|DR742979 RTCU1_8_E11.g2_A029 Roots plus added... 177 2e-057
gb|DR016143.1|DR016143 STRS1_8_A11.b1_A034 Shoot tip pitch ... 219 2e-056
gb|DR094995.1|DR094995 STRR1_18_C12.b1_A033 Stem Response R... 219 2e-056
dbj|BD224541.1| Materials and methods for the modification ... 218 4e-056
gb|DR055128.1|DR055128 RTCA1_21_E12.g2_A029 Roots minus cal... 177 1e-055
gb|DR116666.1|DR116666 RTMG1_2_C01.b1_A029 Roots minus magn... 162 2e-054
gb|BG526919.1|BG526919 NXPV_057_D07_F NXPV (Nsf Xylem Plani... 169 3e-054
gb|CO200758.1|CO200758 RTCNT2_1_G11.b1_A029 Root control 2 ... 160 1e-053
gb|DR177291.1|DR177291 RTMNUT1_4_H11.b1_A029 Roots minus mi... 208 3e-053
gb|BX253310.1|BX253310 BX253310 Pinus pinaster differenciat... 160 5e-053
gb|DR071752.1|DR071752 RTDK1_21_H05.g1_A029 Roots, dark Pin... 177 9e-053
gb|CO200836.1|CO200836 RTCNT2_1_G11.g1_A029 Root control 2 ... 153 1e-051
gb|DR743998.1|DR743998 RTCU1_19_C05.g1_A029 Roots plus adde... 153 1e-051
gb|BI077306.1|BI077306 NXPV_095_D09_F NXPV (Nsf Xylem Plani... 171 1e-051
gb|BF169470.1|BF169470 NXCI_123_A06_F NXCI (Nsf Xylem Compr... 168 8e-051
gb|DR015667.1|DR015667 STRS1_4_H07.g1_A034 Shoot tip pitch ... 199 1e-050
gb|BX784330.1|BX784330 BX784330 Pinus pinaster differenciat... 199 3e-050
gb|DR385194.1|DR385194 RTHG1_7_E08.b1_A029 Roots plus added... 197 1e-049
gb|DR100567.1|DR100567 STRR1_65_D03.b1_A033 Stem Response R... 147 1e-049
gb|CO159104.1|CO159104 FLD1_11_H06.b1_A029 Root flooded Pin... 147 1e-049
gb|CV033545.1|CV033545 RTNACL1_35_E05.b1_A029 Roots plus ad... 196 1e-049
gb|DR096367.1|DR096367 STRR1_27_C01.g1_A033 Stem Response R... 146 1e-049
gb|CF671298.1|CF671298 RTCNT1_56_D06.b1_A029 Root control P... 144 5e-049
gb|CF385606.1|CF385606 RTDR1_5_D06.b1_A015 Loblolly pine ro... 144 5e-049
gb|DR016971.1|DR016971 STRS1_13_F09.b1_A034 Shoot tip pitch... 191 6e-048
gb|DR388548.1|DR388548 RTHG1_29_A02.b1_A029 Roots plus adde... 190 1e-047
gb|BF518234.1|BF518234 NXSI_036_F06_F NXSI (Nsf Xylem Side ... 177 2e-047
gb|DR017313.1|DR017313 STRS1_15_B04.g1_A034 Shoot tip pitch... 189 2e-047
gb|DR181227.1|DR181227 RTMNUT1_37_D03.g2_A029 Roots minus m... 189 2e-047
gb|U39405.1|PTU39405 Pinus taeda xylem 4-coumarate:CoA liga... 124 2e-047
gb|U39404.1|PTU39404 Pinus taeda xylem 4-coumarate:CoA liga... 124 2e-047
gb|DR079994.1|DR079994 RTFEPL1_19_H03.b1_A029 Roots plus ad... 186 2e-046
gb|CX645881.1|CX645881 COLD1_5_G11.g1_A029 Root cold Pinus ... 185 4e-046
dbj|BD224475.1| Materials and methods for the modification ... 184 7e-046
gb|DR102163.1|DR102163 STRR1_79_A04.b1_A033 Stem Response R... 183 1e-045
gb|DR742574.1|DR742574 RTCU1_5_D01.b2_A029 Roots plus added... 183 1e-045
gb|DR388347.1|DR388347 RTHG1_27_E04.g1_A029 Roots plus adde... 182 2e-045
gb|CF393502.1|CF393502 RTDR3_13_D03.g1_A022 Loblolly pine r... 177 6e-044
gb|CX714585.1|CX714585 RTPQ1_23_E02.g1_A032 Roots treated w... 177 6e-044
gb|AW290167.1|AW290167 NXNV015G05F Nsf Xylem Normal wood Ve... 127 1e-043
gb|CD026879.1|CD026879 NXNV015G05 Nsf Xylem Normal wood Ver... 127 1e-043
gb|AI812407.1|AI812407 10A6 Pine Lambda Zap Xylem library P... 124 7e-043
gb|DR098995.1|DR098995 STRR1_50_E02.b1_A033 Stem Response R... 167 6e-041
gb|DR095071.1|DR095071 STRR1_18_C12.g1_A033 Stem Response R... 162 2e-039
gb|DR049100.1|DR049100 RTBOR1_13_H01.b1_A029 Roots plus add... 109 2e-038
gb|DR022275.1|DR022275 STRS1_50_A09.b1_A034 Shoot tip pitch... 158 4e-038
gb|DR018039.1|DR018039 STRS1_20_D02.b1_A034 Shoot tip pitch... 157 7e-038
gb|DR744616.1|DR744616 RTCU1_23_E12.g1_A029 Roots plus adde... 157 7e-038
gb|DR386037.1|DR386037 RTHG1_12_B08.g1_A029 Roots plus adde... 105 2e-037
gb|BQ702559.1|BQ702559 NXSI_130_A02_F NXSI (Nsf Xylem Side ... 155 3e-037
gb|AH014199.1|SEG_AY764396S Pinus taeda isolate 10 4-coumar... 89 3e-036
gb|AH014205.1|SEG_AY764414S Pinus taeda isolate 30 4-coumar... 89 3e-036
gb|AH014212.1|SEG_AY764435S Pinus taeda isolate 11 4-coumar... 89 3e-036
gb|AH014217.1|SEG_AY764450S Pinus taeda isolate 3 4-coumara... 89 3e-036
gb|AH014220.1|SEG_AY764459S Pinus taeda isolate 9 4-coumara... 89 3e-036
gb|AH014226.1|SEG_AY764477S Pinus taeda isolate 21 4-coumar... 89 3e-036
gb|AH014198.1|SEG_AY764393S Pinus taeda isolate 22 4-coumar... 89 3e-036
gb|AH014200.1|SEG_AY764399S Pinus taeda isolate 24 4-coumar... 89 3e-036
gb|AH014201.1|SEG_AY764402S Pinus taeda isolate 15 4-coumar... 89 3e-036
gb|AH014202.1|SEG_AY764405S Pinus taeda isolate 17 4-coumar... 89 3e-036
gb|AH014203.1|SEG_AY764408S Pinus taeda isolate 23 4-coumar... 89 3e-036
gb|AH014204.1|SEG_AY764411S Pinus taeda isolate 16 4-coumar... 89 3e-036
gb|AH014206.1|SEG_AY764417S Pinus taeda isolate 13 4-coumar... 89 3e-036
gb|AH014208.1|SEG_AY764423S Pinus taeda isolate 7 4-coumara... 89 3e-036
gb|AH014209.1|SEG_AY764426S Pinus taeda isolate 31 4-coumar... 89 3e-036
gb|AH014213.1|SEG_AY764438S Pinus taeda isolate 27 4-coumar... 89 3e-036
gb|AH014214.1|SEG_AY764441S Pinus taeda isolate 8 4-coumara... 89 3e-036
gb|AH014215.1|SEG_AY764444S Pinus taeda isolate 26 4-coumar... 89 3e-036
gb|AH014218.1|SEG_AY764453S Pinus taeda isolate 4 4-coumara... 89 3e-036
gb|AH014221.1|SEG_AY764462S Pinus taeda isolate 1 4-coumara... 89 3e-036
gb|AH014222.1|SEG_AY764465S Pinus taeda isolate 19 4-coumar... 89 3e-036
gb|AH014223.1|SEG_AY764468S Pinus taeda isolate 29 4-coumar... 89 3e-036
gb|AH014224.1|SEG_AY764471S Pinus taeda isolate 18 4-coumar... 89 3e-036
gb|AH014225.1|SEG_AY764474S Pinus taeda isolate 20 4-coumar... 89 3e-036
gb|AH014227.1|SEG_AY764480S Pinus taeda isolate 12 4-coumar... 89 3e-036
gb|AH014228.1|SEG_AY764483S Pinus taeda isolate 2 4-coumara... 89 3e-036
gb|AH014229.1|SEG_AY764486S Pinus taeda isolate 14 4-coumar... 89 3e-036
gb|AH014207.1|SEG_AY764420S Pinus taeda isolate 28 4-coumar... 89 3e-036
gb|AH014210.1|SEG_AY764429S Pinus taeda isolate 32 4-coumar... 89 3e-036
gb|AH014216.1|SEG_AY764447S Pinus taeda isolate 5 4-coumara... 89 3e-036
gb|AH014219.1|SEG_AY764456S Pinus taeda isolate 6 4-coumara... 89 3e-036
gb|AH014211.1|SEG_AY764432S Pinus taeda isolate 25 4-coumar... 89 3e-036
gb|DR687196.1|DR687196 EST1077275 Normalized pine embryo li... 125 6e-036
gb|DR116749.1|DR116749 RTMG1_2_C01.g1_A029 Roots minus magn... 148 4e-035
gb|AW985299.1|AW985299 NXNV_135_E09_F Nsf Xylem Normal wood... 141 5e-033
gb|BG317657.1|BG317657 NXPV_004_C07_F NXPV (Nsf Xylem Plani... 91 6e-033
gb|BQ698042.1|BQ698042 NXPV_063_H04_F NXPV (Nsf Xylem Plani... 91 6e-033
gb|BI643841.1|BI643841 NXPV_123_F05_F NXPV (Nsf Xylem Plani... 91 6e-033
gb|DR102397.1|DR102397 STRR1_80_G02.g1_A033 Stem Response R... 91 6e-033
gb|CF671894.1|CF671894 RTCNT1_60_A12.b1_A029 Root control P... 87 1e-031
gb|CF669432.1|CF669432 RTCNT1_43_G10.b1_A029 Root control P... 85 4e-031
gb|CF398551.1|CF398551 RTDS3_15_H06.g1_A022 Drought-stresse... 119 5e-031
gb|CF401087.1|CF401087 RTWW1_10_F02.b1_A015 Well-watered lo... 82 2e-030
gb|CF390990.1|CF390990 RTDR3_3_G03.b1_A022 Loblolly pine ro... 82 2e-030
gb|AW985215.1|AW985215 NXNV_132_E10_F Nsf Xylem Normal wood... 130 1e-029
gb|CO163929.1|CO163929 FLD1_44_E06.g1_A029 Root flooded Pin... 129 2e-029
gb|DR070573.1|DR070573 RTDK1_14_E04.b1_A029 Roots, dark Pin... 124 3e-029
gb|BX251844.1|BX251844 BX251844 Pinus pinaster differenciat... 78 6e-029
gb|DR070641.1|DR070641 RTDK1_14_E04.g1_A029 Roots, dark Pin... 124 1e-028
gb|DR081795.1|DR081795 RTFEPL1_32_G09.b1_A029 Roots plus ad... 126 2e-028
gb|DN459906.1|DN459906 EST955705 Sequencing ESTs from loblo... 114 5e-028
gb|CF471805.1|CF471805 RTDS1_6_F03.g1_A015 Drought-stressed... 114 5e-028
gb|CF402048.1|CF402048 RTWW1_16_D09.g1_A015 Well-watered lo... 114 5e-028
gb|CF479036.1|CF479036 RTWW3_21_H08.g1_A022 Well-watered lo... 114 1e-027
gb|DR181181.1|DR181181 RTMNUT1_37_G09.b2_A029 Roots minus m... 112 2e-027
gb|CX650544.1|CX650544 COLD1_46_A02.g1_A029 Root cold Pinus... 112 2e-027
gb|CX650475.1|CX650475 COLD1_46_A02.b1_A029 Root cold Pinus... 112 2e-027
gb|DR055040.1|DR055040 RTCA1_21_E01.b1_A029 Roots minus cal... 112 2e-027
gb|DR011839.1|DR011839 HEAT1_8_E11.b1_A029 Root at 37 C for... 114 2e-027
gb|DR099509.1|DR099509 STRR1_56_D05.b1_A033 Stem Response R... 114 9e-027
gb|DR025301.1|DR025301 STRS1_70_G02.g1_A034 Shoot tip pitch... 114 9e-027
gb|BF010576.1|BF010576 NXCI_086_C09_F NXCI (Nsf Xylem Compr... 120 1e-026
gb|CX650696.1|CX650696 COLD1_47_B03.g1_A029 Root cold Pinus... 113 1e-026
gb|CF666715.1|CF666715 RTCNT1_25_C12.g1_A029 Root control P... 113 1e-026
gb|CX651105.1|CX651105 COLD1_50_D11.b1_A029 Root cold Pinus... 113 1e-026
gb|CX650629.1|CX650629 COLD1_47_B03.b1_A029 Root cold Pinus... 113 1e-026
gb|DR101826.1|DR101826 STRR1_76_D03.b1_A033 Stem Response R... 113 1e-026
gb|DR101858.1|DR101858 STRR1_76_G10.b1_A033 Stem Response R... 113 1e-026
gb|CF665290.1|CF665290 RTCNT1_15_D01.b1_A029 Root control P... 113 1e-026
gb|AW754726.1|AW754726 PC07B01 Pine TriplEx pollen cone lib... 95 1e-026
gb|CF670357.1|CF670357 RTCNT1_49_E06.g1_A029 Root control P... 114 2e-026
gb|CF472804.1|CF472804 RTDS1_11_G11.g1_A015 Drought-stresse... 112 3e-026
gb|DR011828.1|DR011828 HEAT1_8_D11.b1_A029 Root at 37 C for... 114 3e-026
gb|CX645292.1|CX645292 COLD1_1_F03.g1_A029 Root cold Pinus ... 113 3e-026
gb|DR025459.1|DR025459 STRS1_71_F02.g1_A034 Shoot tip pitch... 115 5e-025
gb|BQ696109.1|BQ696109 NXPV_036_D12_F NXPV (Nsf Xylem Plani... 70 5e-025
gb|CF476523.1|CF476523 RTWW3_2_B10.b1_A022 Well-watered lob... 114 6e-025
gb|CX647084.1|CX647084 COLD1_13_A02.g1_A029 Root cold Pinus... 114 6e-025
gb|BM157962.1|BM157962 NXLV_027_F08_F NXLV (Nsf Xylem Late ... 113 1e-024
gb|CF387004.1|CF387004 RTDR1_10_B07.b1_A015 Loblolly pine r... 113 1e-024
gb|CF472765.1|CF472765 RTDS1_11_E04.g1_A015 Drought-stresse... 67 1e-024
gb|DR095657.1|DR095657 STRR1_22_E09.g1_A033 Stem Response R... 110 2e-023
gb|DR095802.1|DR095802 STRR1_23_E10.g1_A033 Stem Response R... 110 2e-023
gb|CF386372.1|CF386372 RTDR1_14_C07.b1_A015 Loblolly pine r... 103 2e-023
gb|DR181149.1|DR181149 RTMNUT1_37_D03.b2_A029 Roots minus m... 108 4e-023
gb|DR385972.1|DR385972 RTHG1_12_B08.b1_A029 Roots plus adde... 70 4e-023
gb|AA740006.1|AA740006 771 PtIFG2 Pinus taeda cDNA clone 92... 70 8e-023
gb|AY764394.1|AY764393S2 Pinus taeda isolate 22 4-coumarate... 89 1e-022
gb|AY764397.1|AY764396S2 Pinus taeda isolate 10 4-coumarate... 89 1e-022
gb|AY764400.1|AY764399S2 Pinus taeda isolate 24 4-coumarate... 89 1e-022
gb|AY764403.1|AY764402S2 Pinus taeda isolate 15 4-coumarate... 89 1e-022
gb|AY764406.1|AY764405S2 Pinus taeda isolate 17 4-coumarate... 89 1e-022
gb|AY764409.1|AY764408S2 Pinus taeda isolate 23 4-coumarate... 89 1e-022
gb|AY764412.1|AY764411S2 Pinus taeda isolate 16 4-coumarate... 89 1e-022
gb|AY764415.1|AY764414S2 Pinus taeda isolate 30 4-coumarate... 89 1e-022
gb|AY764418.1|AY764417S2 Pinus taeda isolate 13 4-coumarate... 89 1e-022
gb|AY764421.1|AY764420S2 Pinus taeda isolate 28 4-coumarate... 89 1e-022
gb|AY764424.1|AY764423S2 Pinus taeda isolate 7 4-coumarate:... 89 1e-022
gb|AY764427.1|AY764426S2 Pinus taeda isolate 31 4-coumarate... 89 1e-022
gb|AY764430.1|AY764429S2 Pinus taeda isolate 32 4-coumarate... 89 1e-022
gb|AY764433.1|AY764432S2 Pinus taeda isolate 25 4-coumarate... 89 1e-022
gb|AY764436.1|AY764435S2 Pinus taeda isolate 11 4-coumarate... 89 1e-022
gb|AY764439.1|AY764438S2 Pinus taeda isolate 27 4-coumarate... 89 1e-022
gb|AY764442.1|AY764441S2 Pinus taeda isolate 8 4-coumarate:... 89 1e-022
gb|AY764445.1|AY764444S2 Pinus taeda isolate 26 4-coumarate... 89 1e-022
gb|AY764448.1|AY764447S2 Pinus taeda isolate 5 4-coumarate:... 89 1e-022
gb|AY764451.1|AY764450S2 Pinus taeda isolate 3 4-coumarate:... 89 1e-022
gb|AY764454.1|AY764453S2 Pinus taeda isolate 4 4-coumarate:... 89 1e-022
gb|AY764457.1|AY764456S2 Pinus taeda isolate 6 4-coumarate:... 89 1e-022
gb|AY764460.1|AY764459S2 Pinus taeda isolate 9 4-coumarate:... 89 1e-022
gb|AY764463.1|AY764462S2 Pinus taeda isolate 1 4-coumarate:... 89 1e-022
gb|AY764466.1|AY764465S2 Pinus taeda isolate 19 4-coumarate... 89 1e-022
gb|AY764469.1|AY764468S2 Pinus taeda isolate 29 4-coumarate... 89 1e-022
gb|AY764472.1|AY764471S2 Pinus taeda isolate 18 4-coumarate... 89 1e-022
gb|AY764475.1|AY764474S2 Pinus taeda isolate 20 4-coumarate... 89 1e-022
gb|AY764478.1|AY764477S2 Pinus taeda isolate 21 4-coumarate... 89 1e-022
gb|AY764481.1|AY764480S2 Pinus taeda isolate 12 4-coumarate... 89 1e-022
gb|AY764484.1|AY764483S2 Pinus taeda isolate 2 4-coumarate:... 89 1e-022
gb|AY764487.1|AY764486S2 Pinus taeda isolate 14 4-coumarate... 89 1e-022
gb|AW289536.1|AW289536 NXNV002B02F Nsf Xylem Normal wood Ve... 105 3e-022
gb|AL751078.1|AL751078 AL751078 RS Pinus pinaster cDNA clon... 105 3e-022
gb|CD028108.1|CD028108 NXNV002B02 Nsf Xylem Normal wood Ver... 105 3e-022
gb|CF474012.1|CF474012 RTWW2_18_G04.b1_A021 Well-watered lo... 105 5e-022
gb|CX645226.1|CX645226 COLD1_1_F03.b1_A029 Root cold Pinus ... 97 1e-021
gb|CF402515.1|CF402515 RTWW1_21_D04.b1_A015 Well-watered lo... 103 2e-021
gb|CF479281.1|CF479281 RTWW3_23_E04.b1_A022 Well-watered lo... 103 2e-021
>gb|CO201211.1|CO201211 RTCNT2_4_G07.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_4_G07_A029 3', mRNA sequence
Length = 703
Score = 310 bits (672), Expect = 6e-084
Identities = 122/180 (67%), Positives = 155/180 (86%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+ G LA+ +EAK+VD TG+ L P +GELW+RGP +MKGY G+DEATA+T+DSEGWLKT
Sbjct: 11 TTGLLAATMEAKVVDTVTGKALPPNHKGELWLRGPTIMKGYFGNDEATASTLDSEGWLKT 190
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCY +EDG L++VDRLKELIKYKG+QV PAELE +L S+P+I DAAVIPYPD++AGQ+
Sbjct: 191 GDLCYIDEDGFLFVVDRLKELIKYKGFQVAPAELEELLLSNPEITDAAVIPYPDKEAGQV 370
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PM+F+VRKPGSNL E+ V FVAKQV+ YKK+RRVAFV++IPKSP+GKILR++L+ +S
Sbjct: 371 PMSFVVRKPGSNLCEEDVKKFVAKQVSSYKKIRRVAFVTSIPKSPSGKILRKDLIYQLLS 550
Score = 114 bits (244), Expect(2) = 3e-030
Identities = 60/113 (53%), Positives = 64/113 (56%)
Frame = -2 / -2
Query: 511 KIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXXXXX 332
KIFP GD GI T ATRR FL TCLAT +T S R PGFLT IG+ P
Sbjct: 519 KIFPDGDFGIEVTNATRRIFLYDETCLATNFLTSSSHRLLPGFLTTNDIGT*PASLSGYG 340
Query: 331 XXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
G E S+SAG T* PLY INSFN ST NPSS *HRSPVF+
Sbjct: 339 ITAASVISGFERSNSSNSAGAT*NPLYLINSFNLSTTKRNPSSSM*HRSPVFS 181
Score = 107 bits (228), Expect = 1e-022
Identities = 56/157 (35%), Positives = 83/157 (52%)
Frame = -1 / -1
Query: 485 NCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWELPGVFVWIRNNCCVHDIR 306
N +K HST FLV +LF ++ D+LL ++ PH K HW L + +R+N C+ ++
Sbjct: 493 N*SHKCHSTYFLVR*NLFGNKFFDILLAQIATRLPHNK*HWYLTCFLIRVRDNSCISNLW 314
Query: 305 MRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVA*VTGFQPAF*IHCCCSSLVVTD 126
+ + L F L S VL QLF ++N + PIL+ V *+ GFQP F + CS ++T
Sbjct: 313 V*EEQFL*FCWSNLKSFVLDQLF*SVHNKKEPILINVT*IPGFQPPFRVQS*CSCFIITK 134
Query: 125 ITFHDDWSSDPELAALPWPKHLAGGGIDDLCLQVRCQ 15
ITFH S P+LA + + A + CQ
Sbjct: 133 ITFHYCRSPQPKLAFMVGWQRFASDCVHHFGFHGSCQ 23
Score = 37.3 bits (75), Expect(2) = 3e-030
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -2 / -2
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+ GPR+QSSP G S PV ST AS AS P
Sbjct: 126 FIIVGPRSQSSPLWLGGSALPVTVSTTLASMVAASKP 16
>gb|CX653107.1|CX653107 COLD1_63_A08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_63_A08_A029 5', mRNA sequence
Length = 766
Score = 307 bits (664), Expect = 8e-083
Identities = 121/180 (67%), Positives = 154/180 (85%)
Frame = +3 / -2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+ G LA+ +EAK+VD TG+ L P +GELW+RGP +MKGY G+DEATA+T+DSE WLKT
Sbjct: 681 TTGLLAATMEAKVVDTVTGKALPPNHKGELWLRGPTIMKGYFGNDEATASTLDSERWLKT 502
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCY +EDG L++VDRLKELIKYKG+QV PAELE +L S+P+I DAAVIPYPD++AGQ+
Sbjct: 501 GDLCYIDEDGFLFVVDRLKELIKYKGFQVAPAELEELLLSNPEITDAAVIPYPDKEAGQV 322
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PM+F+VRKPGSNL E+ V FVAKQV+ YKK+RRVAFV++IPKSP+GKILR++L+ +S
Sbjct: 321 PMSFVVRKPGSNLCEEDVKKFVAKQVSSYKKIRRVAFVTSIPKSPSGKILRKDLIYQLLS 142
Score = 112 bits (240), Expect(2) = 1e-029
Identities = 59/113 (52%), Positives = 63/113 (55%)
Frame = -2 / +2
Query: 511 KIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXXXXX 332
KIFP GD GI T ATRR FL TC AT +T S R PGFLT IG+ P
Sbjct: 173 KIFPDGDFGIEVTNATRRIFLYDETCFATNFLTSSSHRLLPGFLTTNDIGT*PASLSGYG 352
Query: 331 XXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
G E S+SAG T* PLY INSFN ST NPSS *HRSPVF+
Sbjct: 353 ITAASVISGFERSNSSNSAGAT*NPLYLINSFNLSTTKRNPSSSM*HRSPVFS 511
Score = 106 bits (227), Expect = 1e-022
Identities = 56/157 (35%), Positives = 83/157 (52%)
Frame = -1 / +1
Query: 485 NCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHWELPGVFVWIRNNCCVHDIR 306
N +K HST FLV +LF ++ D+LL ++ PH K HW L + +R+N C+ ++
Sbjct: 199 N*SHKCHSTYFLVR*NLFCNKFFDILLAQIATRLPHNK*HWYLTCFLIRVRDNSCISNLW 378
Query: 305 MRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVA*VTGFQPAF*IHCCCSSLVVTD 126
+ + L F L S VL QLF ++N + PIL+ V *+ GFQP F + CS ++T
Sbjct: 379 V*EEQFL*FCWSNLKSFVLDQLF*SVHNKKEPILINVT*IPGFQPPFRVQS*CSCFIITK 558
Query: 125 ITFHDDWSSDPELAALPWPKHLAGGGIDDLCLQVRCQ 15
ITFH S P+LA + + A + CQ
Sbjct: 559 ITFHYCRSPQPKLAFMVGWQRFASDCVHHFGFHGSCQ 669
Score = 37.3 bits (75), Expect(2) = 1e-029
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -2 / +2
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
F+ GPR+QSSP G S PV ST AS AS P
Sbjct: 566 FIIVGPRSQSSPLWLGGSALPVTVSTTLASMVAASKP 676
>gb|DR101710.1|DR101710 STRR1_75_F02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_75_F02_A033 3', mRNA sequence
Length = 871
Score = 296 bits (640), Expect = 2e-079
Identities = 117/180 (65%), Positives = 152/180 (84%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+ G LA+++EAK+VD ++G+ + P +GELW+RGP +MKGY +DE TA+T+DSEGWLKT
Sbjct: 105 TAGLLAANVEAKVVDTASGKAMPPNHKGELWLRGPTIMKGYFRNDEETASTLDSEGWLKT 284
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCY +E+G L+IVDR+KELIKYK YQV PAELE +L S+ +I DAAVIPYPD +AGQ+
Sbjct: 285 GDLCYIDEEGFLFIVDRIKELIKYKAYQVTPAELEELLLSNLEISDAAVIPYPDVEAGQI 464
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMAFIVRK SNL+E+ V FVAKQV+PYK++RRVAFV++IPKSP GKILR++L+ A+S
Sbjct: 465 PMAFIVRKSDSNLSEEDVKKFVAKQVSPYKRIRRVAFVNSIPKSPMGKILRKDLIHQALS 644
Score = 104 bits (221), Expect(2) = 3e-026
Identities = 57/113 (50%), Positives = 59/113 (52%)
Frame = -2 / -1
Query: 511 KIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXXXXX 332
KI P GDLGI T ATRR L G TC AT T S R FLTI AIG P
Sbjct: 613 KILPMGDLGIELTNATRRILLYGETCFATNFFTSSSERLLSDFLTINAIGI*PASTSGYG 434
Query: 331 XXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
E S+SAG T*Y LY INSF STM PSS *HRSPVF+
Sbjct: 433 ITAASLISRFERSNSSNSAGVT*YALYLINSFILSTMKRKPSSSM*HRSPVFS 275
Score = 34.5 bits (69), Expect(2) = 3e-026
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = -2 / -1
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFP 8
FM GPR QSSP G P+ ST AS AS P
Sbjct: 220 FMIVGPRNQSSPLWLGGIALPLAVSTTLASTLAASNP 110
>gb|DR052644.1|DR052644 RTCA1_5_H11.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_5_H11_A029 5', mRNA sequence
Length = 803
Score = 294 bits (637), Expect = 4e-079
Identities = 115/180 (63%), Positives = 152/180 (84%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+ G L+ + EAKI++P +G L P Q+GELW+RGP VMKGY + EAT +T++S+GWL+T
Sbjct: 57 TAGLLSPNTEAKIIEPISGTPLPPNQQGELWLRGPYVMKGYFSNTEATTSTLNSDGWLRT 236
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCY +++G +++VDRLKELIKYKGYQV PAELE +L+SHP+IMD AVIP+PD++AGQ+
Sbjct: 237 GDLCYVDDEGYIFVVDRLKELIKYKGYQVAPAELEALLHSHPEIMDVAVIPFPDKEAGQV 416
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
PMA+IVRKPG L+E V++FVA+QVAPYKKVR VAFVS IPK+ AGKILR++L++ A S
Sbjct: 417 PMAYIVRKPGGTLSESSVINFVAQQVAPYKKVRHVAFVSEIPKNAAGKILRKDLIKLATS 596
Score = 112 bits (239), Expect(2) = 2e-028
Identities = 66/143 (46%), Positives = 77/143 (53%)
Frame = -2 / -2
Query: 598 LLDFDVSINFKLQSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKS 419
+L F+ + L + ++ A S IFPA GI+ TKAT RTFL GATC ATK
Sbjct: 652 ILFFNKQMKPILPQMHQSLEVASLIKSFLNIFPAAFFGISLTKAT*RTFLYGATC*ATKL 473
Query: 418 MTCCSVRFDPGFLTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINS 239
+T S PGFLTI AIG+ P G*E R S+SAG T PLY INS
Sbjct: 472 ITLLSDSVPPGFLTIYAIGTWPASLSGNGITATSIISG*ECRSASNSAGATW*PLYLINS 293
Query: 238 FNRSTM*SNPSSLK*HRSPVFNQ 170
FN ST PSS * RSPV +Q
Sbjct: 292 FNLSTTKM*PSSST*QRSPVRSQ 224
Score = 33.6 bits (67), Expect(2) = 2e-028
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = -2 / -2
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFAS 29
FMT GPR+ SSP G P GS IFAS
Sbjct: 172 FMTYGPRSHSSPCWFGGRGVPEIGSIIFAS 83
>gb|CV033633.1|CV033633 RTNACL1_35_E05.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_35_E05_A029 5', mRNA sequence
Length = 772
Score = 290 bits (628), Expect = 7e-078
Identities = 112/176 (63%), Positives = 151/176 (85%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+VG L+ +EAK+VDP + + L P RGEL +RGP +MKGY G++ ATA+T+DSEGWL+T
Sbjct: 107 TVGLLSDVVEAKVVDPDSAKPLPPNHRGELLLRGPTIMKGYFGNEHATASTLDSEGWLRT 286
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCYF+E+G L++VDRLK+LIKYK YQV PAELE +L SHP+I +AAVIPYPD++AGQ+
Sbjct: 287 GDLCYFDEEGFLFVVDRLKDLIKYKAYQVAPAELEELLLSHPEISEAAVIPYPDQEAGQI 466
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVE 530
PMAF+VR PGS+L+E+ V++FVA+QV YKK+RRVAF ++IPK+ +GKILR++L+E
Sbjct: 467 PMAFVVRSPGSSLSERDVINFVAEQVIHYKKIRRVAFTNSIPKNASGKILRKDLIE 634
Score = 62.5 bits (130), Expect(3) = 2e-022
Identities = 32/59 (54%), Positives = 34/59 (57%)
Frame = -2 / -2
Query: 529 STSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCP 353
S S KI P LGI ATRR FL* TC ATK +T S+R PG LT AIG CP
Sbjct: 633 SIRSFLKILPDAFLGIEFVNATRRIFL*CITCSATKFITSLSLRLLPGLLTTNAIGICP 457
Score = 47.8 bits (98), Expect(3) = 2e-022
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = -2 / -2
Query: 286 SSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
S+SAG T Y LY I SFN ST PSS K* RSPV +
Sbjct: 390 SNSAGATWYALYLIKSFNLSTTKRKPSSSK*QRSPVLS 277
Score = 33.1 bits (66), Expect(3) = 2e-022
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -2 / -2
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFPT 5
FM GPR SSP G GST FAS + PT
Sbjct: 222 FMIVGPRNNSSPLWFGGRGFAESGSTTFASTTSLNNPT 109
>gb|DR052598.1|DR052598 RTCA1_5_D09.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_5_D09_A029 5', mRNA sequence
Length = 862
Score = 290 bits (628), Expect = 7e-078
Identities = 112/176 (63%), Positives = 151/176 (85%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
+VG L+ +EAK+VDP + + L P RGEL +RGP +MKGY G++ ATA+T+DSEGWL+T
Sbjct: 153 TVGLLSDVVEAKVVDPDSAKPLPPNHRGELLLRGPTIMKGYFGNEHATASTLDSEGWLRT 332
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCYF+E+G L++VDRLK+LIKYK YQV PAELE +L SHP+I +AAVIPYPD++AGQ+
Sbjct: 333 GDLCYFDEEGFLFVVDRLKDLIKYKAYQVAPAELEELLLSHPEISEAAVIPYPDQEAGQI 512
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVE 530
PMAF+VR PGS+L+E+ V++FVA+QV YKK+RRVAF ++IPK+ +GKILR++L+E
Sbjct: 513 PMAFVVRSPGSSLSERDVINFVAEQVIHYKKIRRVAFTNSIPKNASGKILRKDLIE 680
Score = 62.5 bits (130), Expect(3) = 2e-022
Identities = 32/59 (54%), Positives = 34/59 (57%)
Frame = -2 / -1
Query: 529 STSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCP 353
S S KI P LGI ATRR FL* TC ATK +T S+R PG LT AIG CP
Sbjct: 679 SIRSFLKILPDAFLGIEFVNATRRIFL*CITCSATKFITSLSLRLLPGLLTTNAIGICP 503
Score = 47.8 bits (98), Expect(3) = 2e-022
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = -2 / -1
Query: 286 SSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFN 173
S+SAG T Y LY I SFN ST PSS K* RSPV +
Sbjct: 436 SNSAGATWYALYLIKSFNLSTTKRKPSSSK*QRSPVLS 323
Score = 33.1 bits (66), Expect(3) = 2e-022
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -2 / -1
Query: 118 FMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFPT 5
FM GPR SSP G GST FAS + PT
Sbjct: 268 FMIVGPRNNSSPLWFGGRGFAESGSTTFASTTSLNNPT 155
>gb|DR024373.1|DR024373 STRS1_64_C04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_64_C04_A034 5', mRNA sequence
Length = 880
Score = 267 bits (578), Expect = 5e-071
Identities = 111/180 (61%), Positives = 140/180 (77%)
Frame = +3 / -1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G L LEAKIV+ TG+ L P QRGE+W+RGP +M GY + AT T+D+EGWL T
Sbjct: 778 SAGALVPGLEAKIVNLKTGKPLPPNQRGEVWLRGPNIMTGYFNNPSATKITLDTEGWLHT 599
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ YF+E+G L+IVDR+KELIKYKG+QV PAELE IL +HP I DA VIP PD AG++
Sbjct: 598 GDMGYFDEEGGLFIVDRIKELIKYKGFQVAPAELEGILLTHPQIADAGVIPLPDLKAGEV 419
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
P+A++VR PGS+LTE+ MD+VAKQVAP+K++ RV FV +IPKS +GKILRREL+ A S
Sbjct: 418 PIAYVVRTPGSSLTEKDAMDYVAKQVAPFKRLHRVNFVDSIPKSASGKILRRELIAKAKS 239
Score = 70.3 bits (147), Expect(3) = 2e-021
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = -2 / +3
Query: 541 DTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIG 362
D A + SSRR+IFP DLGI TK T L GATCLAT SM SV+ PG T AIG
Sbjct: 240 DLALAISSRRRIFPEADLGIESTKLTLCNLLNGATCLAT*SMASFSVKELPGVRTTYAIG 419
Query: 361 SCP 353
+ P
Sbjct: 420 TSP 428
Score = 40.0 bits (81), Expect(3) = 2e-021
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = -2 / +3
Query: 286 SSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPV 179
S+SAG T PLY I+S RST+ + PSS K* SPV
Sbjct: 495 SNSAGATWKPLYLISSLIRSTINNPPSSSK*PISPV 602
Score = 29.9 bits (59), Expect(3) = 2e-021
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2 / +3
Query: 106 GPRTQSSPRCPGPSTSPVEGSTIFASKCDASFPTE 2
GPR+ +SPR G PV TIFAS + P +
Sbjct: 675 GPRSHTSPR*LGGRGFPVFRFTIFASSPGTNAPAD 779
>gb|DR018150.1|DR018150 STRS1_20_F09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_20_F09_A034 5', mRNA sequence
Length = 693
Score = 258 bits (558), Expect = 3e-068
Identities = 106/171 (61%), Positives = 134/171 (78%)
Frame = +3 / +2
Query: 30 EAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNED 209
EAK+V TG L P QRGELW RGP +M GY + AT +T+D EGWL TGD+ YF+ED
Sbjct: 2 EAKVVSLKTGRPLPPNQRGELWFRGPNIMPGYFNNPSATKSTLDEEGWLHTGDMGYFDED 181
Query: 210 GLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKP 389
G LYIVDR+KE+IK KGYQV PAELE +L +H I+DA VIP+PD ++G++P+A++VR
Sbjct: 182 GGLYIVDRIKEIIKVKGYQVSPAELEALLLTHSQIVDAGVIPFPDPNSGEVPIAYVVRSL 361
Query: 390 GSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
GS+LTE+ VMD+VAKQVAPYK++ + FV++IPKS AGKILRRELV A S
Sbjct: 362 GSSLTEKDVMDYVAKQVAPYKRLHGINFVNSIPKSSAGKILRRELVAKAKS 514
>gb|DR052520.1|DR052520 RTCA1_5_D09.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_5_D09_A029 3', mRNA sequence
Length = 830
Score = 251 bits (543), Expect = 4e-066
Identities = 95/142 (66%), Positives = 127/142 (89%)
Frame = +3 / +1
Query: 105 PVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAEL 284
P +MKGY G++ ATA+T+DSEGWL+TGDLCYF+E+G L++VDRLK+LIKYK YQV PAEL
Sbjct: 1 PTIMKGYFGNEHATASTLDSEGWLRTGDLCYFDEEGFLFVVDRLKDLIKYKAYQVAPAEL 180
Query: 285 EHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRR 464
E +L SHP+I +AAVIPYPD++AGQ+PMAF+VR PGS+L+E+ V++FVA+QV YKK+RR
Sbjct: 181 EELLLSHPEISEAAVIPYPDQEAGQIPMAFVVRSPGSSLSERDVINFVAEQVIHYKKIRR 360
Query: 465 VAFVSAIPKSPAGKILRRELVE 530
VAF ++IPK+ +GKILR++L+E
Sbjct: 361 VAFTNSIPKNASGKILRKDLIE 426
>gb|DR052557.1|DR052557 RTCA1_5_H11.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_5_H11_A029 3', mRNA sequence
Length = 847
Score = 251 bits (543), Expect = 4e-066
Identities = 98/146 (67%), Positives = 127/146 (86%)
Frame = +3 / +3
Query: 105 PVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAEL 284
P VMKGY + EAT +T++S+GWL+TGDLCY +++G +++VDRLKELIKYKGYQV PAEL
Sbjct: 3 PYVMKGYFSNTEATTSTLNSDGWLRTGDLCYVDDEGYIFVVDRLKELIKYKGYQVAPAEL 182
Query: 285 EHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRR 464
E +L+SHP+IMD AVIP+PD++AGQ+PMA+IVRKPG L+E V++FVA+QVAPYKKVR
Sbjct: 183 EALLHSHPEIMDVAVIPFPDKEAGQVPMAYIVRKPGGTLSESSVINFVAQQVAPYKKVRH 362
Query: 465 VAFVSAIPKSPAGKILRRELVEXAVS 542
VAFVS IPK+ AGKILR++L++ A S
Sbjct: 363 VAFVSEIPKNAAGKILRKDLIKLATS 440
Score = 112 bits (239), Expect = 3e-024
Identities = 66/143 (46%), Positives = 77/143 (53%)
Frame = -2 / -1
Query: 598 LLDFDVSINFKLQSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKS 419
+L F+ + L + ++ A S IFPA GI+ TKAT RTFL GATC ATK
Sbjct: 496 ILFFNKQMKPILPQMHQSLEVASLIKSFLNIFPAAFFGISLTKAT*RTFLYGATC*ATKL 317
Query: 418 MTCCSVRFDPGFLTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINS 239
+T S PGFLTI AIG+ P G*E R S+SAG T PLY INS
Sbjct: 316 ITLLSDSVPPGFLTIYAIGTWPASLSGNGITATSIISG*ECRSASNSAGATW*PLYLINS 137
Query: 238 FNRSTM*SNPSSLK*HRSPVFNQ 170
FN ST PSS * RSPV +Q
Sbjct: 136 FNLSTTKM*PSSST*QRSPVRSQ 68
>gb|DR111859.1|DR111859 RTS1_20_F02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_20_F02_A029 5', mRNA sequence
Length = 816
Score = 251 bits (543), Expect = 4e-066
Identities = 102/174 (58%), Positives = 133/174 (76%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI DP TG L Q GE+ +RGP +MKGY+ D E+TA T+D +GWL T
Sbjct: 92 SCGTVVRNAQMKIADPDTGVSLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 271
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDRLKE+IKYKG+QVPPAELE IL +HP I DAAV+P DE+AG++
Sbjct: 272 GDIGYIDDDDEVFIVDRLKEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEEAGEV 451
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
P+AF+VR G +LTE ++ FVAKQV YKK+R+V F+ AIPKSPAGKILR+EL
Sbjct: 452 PVAFVVRSNGFDLTEDEIKQFVAKQVVFYKKLRKVYFIPAIPKSPAGKILRKEL 613
Score = 115 bits (245), Expect = 5e-025
Identities = 69/163 (42%), Positives = 82/163 (50%)
Frame = -2 / -1
Query: 523 SSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXX 344
+S R IFPAGDLGIA K T R+FL* TCLAT + SVR +P LT A G+ P
Sbjct: 612 NSFRSIFPAGDLGIAGMKYTLRSFL*NTTCLATNCLISSSVRSNPFDLTTNATGTSPASS 433
Query: 343 XXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFNQXX 164
G R+ S+SAGGT* PLY I SF+ STM ++ SS * SPV +
Sbjct: 432 SF*GTTAASAMDGWVMRMASNSAGGT*KPLYLIISFSLSTMKTSSSSSI*PISPVCSHPS 253
Query: 163 XXXXXXXXXXXXXXPFMTTGPRTQSSPRCPGPSTSPVEGSTIF 35
PF+ GP Q SP +PV GS IF
Sbjct: 252 SSIVLAVDSASFRYPFIIWGPLMQISPGWL*GRDTPVSGSAIF 124
>gb|BQ107732.1|BQ107732 NXLV103_F06_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV103_F06 5' similar to Arabidopsis thaliana
sequence At1g20510 putative 4-coumarate:CoA ligase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 725
Score = 250 bits (540), Expect = 1e-065
Identities = 104/170 (61%), Positives = 131/170 (77%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG L ++EAK+VD TG+ L P +RGEL RGP+VMK Y + EAT++ +DSEGWL +
Sbjct: 205 SVGILVPNVEAKVVDIVTGKPLPPNRRGELCFRGPMVMKEYYKNKEATSSAIDSEGWLHS 384
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+C NE+G +YIVDRLKELIKYKG Q+ PAELE +L +P I D+AVIPYPDE+AG++
Sbjct: 385 GDICRINEEGHVYIVDRLKELIKYKGLQIAPAELEELLLRNPXIEDSAVIPYPDEEAGEV 564
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKIL 512
PMAFI RKP SNLT V++FV QVAPYK + VAFV IP++ +GKIL
Sbjct: 565 PMAFIARKPASNLTXXXVIEFVGXQVAPYKXIXXVAFVXXIPRTESGKIL 714
Score = 101 bits (215), Expect = 6e-021
Identities = 66/170 (38%), Positives = 76/170 (44%)
Frame = -2 / -1
Query: 511 KIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXXXXX 332
+IFP G T AT L GAT T S+T VR GFL I AIG+ P
Sbjct: 713 RIFPDSVRGXXXTNATXXIXLYGATXXPTNSITXXXVRLLAGFLAINAIGTSPASSSGYG 534
Query: 331 XXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFNQXXXXXX 152
G R S+SAG PLY ++SF+ ST+ + PSSL SP NQ
Sbjct: 533 ITAESSXXGLRRRSSSNSAGAIWSPLYLMSSFSLSTIYTCPSSLIRQISPECNQPSESMA 354
Query: 151 XXXXXXXXXXPFMTTGPRTQSSPRCPGPSTSPVEGSTIFASKCDASFPTE 2
FMT GPR +SP G PV ST AS S PTE
Sbjct: 353 DDVASLFL*YSFMTIGPRKHNSPLLLGGKGFPVTISTTLASTLGTSMPTE 204
>gb|CF473581.1|CF473581 RTWW2_3_F07.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_3_F07_A021 5', mRNA sequence
Length = 703
Score = 244 bits (528), Expect = 4e-064
Identities = 98/174 (56%), Positives = 132/174 (75%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+DP TG L Q GE+ +RGP +MKGY+ D E+TA T+D +GWL T
Sbjct: 106 SCGTVVRNAQMKIIDPDTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 285
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QVPPAELE IL +HP I DAAV+P DE AG++
Sbjct: 286 GDIGYIDDDEEVFIVDRVKEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEV 465
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
P+AF+VR G +LTE ++ FVAKQV YKK+ +V F+ AIPKSP+GKILR++L
Sbjct: 466 PVAFVVRSNGFDLTEDEIKQFVAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDL 627
Score = 107 bits (228), Expect = 1e-022
Identities = 64/146 (43%), Positives = 73/146 (50%)
Frame = -2 / -3
Query: 520 SRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXX 341
S R IFP GDLGIA K T +FL* TCLAT + SVR +P LT KA G+ P
Sbjct: 623 SFRSIFPEGDLGIAWMKYTLCSFL*NTTCLATNCLISSSVRSNPFDLTTKATGTSPATSS 444
Query: 340 XXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFNQXXX 161
G R+ S+SAGGT* PLYFI SF STM ++ SS * SPV N
Sbjct: 443 F*GTTAASAIDGWVMRMASNSAGGT*KPLYFIISFTLSTMKTSSSSSI*PISPVCNHPSS 264
Query: 160 XXXXXXXXXXXXXPFMTTGPRTQSSP 83
PF+ GP Q SP
Sbjct: 263 SIVLAVDSASFRYPFIIWGPLMQISP 186
>gb|DR017244.1|DR017244 STRS1_15_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_15_B04_A034 3', mRNA sequence
Length = 847
Score = 244 bits (528), Expect = 4e-064
Identities = 98/174 (56%), Positives = 132/174 (75%)
Frame = +3 / -3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+DP TG L Q GE+ +RGP +MKGY+ D E+TA T+D +GWL T
Sbjct: 686 SCGTVVRNAQMKIIDPDTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 507
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QVPPAELE IL +HP I DAAV+P DE AG++
Sbjct: 506 GDIGYIDDDEEVFIVDRVKEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEV 327
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
P+AF+VR G +LTE ++ FVAKQV YKK+ +V F+ AIPKSP+GKILR++L
Sbjct: 326 PVAFVVRSNGFDLTEDEIKQFVAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDL 165
Score = 106 bits (226), Expect = 2e-022
Identities = 64/146 (43%), Positives = 73/146 (50%)
Frame = -2 / +1
Query: 520 SRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXX 341
S R IFP GDLGIA K T +FL* TCLAT + SVR +P LT KA G+ P
Sbjct: 169 SFRSIFPEGDLGIAWMK*TLCSFL*NTTCLATNCLISSSVRSNPFDLTTKATGTSPATSS 348
Query: 340 XXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFNQXXX 161
G R+ S+SAGGT* PLYFI SF STM ++ SS * SPV N
Sbjct: 349 F*GTTAASAIDGWVMRMASNSAGGT*KPLYFIISFTLSTMKTSSSSSI*PISPVCNHPSS 528
Query: 160 XXXXXXXXXXXXXPFMTTGPRTQSSP 83
PF+ GP Q SP
Sbjct: 529 SIVLAVDSASFRYPFIIWGPLMQISP 606
>gb|DR048277.1|DR048277 RTBOR1_7_E05.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_7_E05_A029 5', mRNA sequence
Length = 740
Score = 244 bits (528), Expect = 4e-064
Identities = 98/174 (56%), Positives = 132/174 (75%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+DP TG L Q GE+ +RGP +MKGY+ D E+TA T+D +GWL T
Sbjct: 51 SCGTVVRNAQMKIIDPDTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 230
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QVPPAELE IL +HP I DAAV+P DE AG++
Sbjct: 231 GDIGYIDDDEEVFIVDRVKEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEV 410
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
P+AF+VR G +LTE ++ FVAKQV YKK+ +V F+ AIPKSP+GKILR++L
Sbjct: 411 PVAFVVRSNGFDLTEDEIKQFVAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDL 572
Score = 107 bits (228), Expect = 1e-022
Identities = 64/146 (43%), Positives = 73/146 (50%)
Frame = -2 / -2
Query: 520 SRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXX 341
S R IFP GDLGIA K T +FL* TCLAT + SVR +P LT KA G+ P
Sbjct: 568 SFRSIFPEGDLGIAWMKYTLCSFL*NTTCLATNCLISSSVRSNPFDLTTKATGTSPATSS 389
Query: 340 XXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFNQXXX 161
G R+ S+SAGGT* PLYFI SF STM ++ SS * SPV N
Sbjct: 388 F*GTTAASAIDGWVMRMASNSAGGT*KPLYFIISFTLSTMKTSSSSSI*PISPVCNHPSS 209
Query: 160 XXXXXXXXXXXXXPFMTTGPRTQSSP 83
PF+ GP Q SP
Sbjct: 208 SIVLAVDSASFRYPFIIWGPLMQISP 131
>gb|DR016509.1|DR016509 STRS1_10_C03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_10_C03_A034 5', mRNA sequence
Length = 892
Score = 242 bits (523), Expect = 2e-063
Identities = 94/141 (66%), Positives = 123/141 (87%)
Frame = +3 / +1
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILN 299
GY + EAT +T++S+GWL+TGDLCY +++G +++VDRLKELIKYKGYQV PAELE +L+
Sbjct: 187 GYFSNPEATTSTLNSDGWLRTGDLCYVDDEGYIFVVDRLKELIKYKGYQVAPAELEALLH 366
Query: 300 SHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVS 479
SHP+IMD AVIP+PD++AGQ+PMA+IVRKPG L+E V++FVA+QVAPYKKVR VAFVS
Sbjct: 367 SHPEIMDVAVIPFPDKEAGQVPMAYIVRKPGGTLSESSVINFVAQQVAPYKKVRHVAFVS 546
Query: 480 AIPKSPAGKILRRELVEXAVS 542
IPK+ AGKILR++L++ A S
Sbjct: 547 EIPKNAAGKILRKDLIKLATS 609
Score = 112 bits (239), Expect = 3e-024
Identities = 66/143 (46%), Positives = 77/143 (53%)
Frame = -2 / -3
Query: 598 LLDFDVSINFKLQSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKS 419
+L F+ + L + ++ A S IFPA GI+ TKAT RTFL GATC ATK
Sbjct: 665 ILFFNKQMKPILPQIHQSLEVASLIKSFLNIFPAAFFGISLTKAT*RTFLYGATC*ATKL 486
Query: 418 MTCCSVRFDPGFLTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINS 239
+T S PGFLTI AIG+ P G*E R S+SAG T PLY INS
Sbjct: 485 ITLLSDSVPPGFLTIYAIGTWPASLSGNGITATSIISG*ECRSASNSAGATW*PLYLINS 306
Query: 238 FNRSTM*SNPSSLK*HRSPVFNQ 170
FN ST PSS * RSPV +Q
Sbjct: 305 FNLSTTKM*PSSST*QRSPVRSQ 237
>gb|DR079274.1|DR079274 RTFEPL1_10_F01.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_10_F01_A029 3', mRNA sequence
Length = 880
Score = 241 bits (520), Expect = 5e-063
Identities = 96/165 (58%), Positives = 128/165 (77%)
Frame = +3 / +3
Query: 30 EAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNED 209
+ KI+DP TG L Q GE+ +RGP +MKGY+ D E+TA T+D +GWL TGD+ Y ++D
Sbjct: 3 QMKIIDPDTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHTGDIGYIDDD 182
Query: 210 GLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKP 389
++IVDR+KE+IKYKG+QVPPAELE IL +HP I DAAV+P DE AG++P+AF+VR
Sbjct: 183 EEVFIVDRVKEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEVPVAFVVRSN 362
Query: 390 GSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
G +LTE ++ FVAKQV YKK+ +V F+ AIPKSP+GKILR++L
Sbjct: 363 GFDLTEDEIKQFVAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDL 497
Score = 107 bits (228), Expect = 1e-022
Identities = 64/146 (43%), Positives = 73/146 (50%)
Frame = -2 / -1
Query: 520 SRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXX 341
S R IFP GDLGIA K T +FL* TCLAT + SVR +P LT KA G+ P
Sbjct: 493 SFRSIFPEGDLGIAWMKYTLCSFL*NTTCLATNCLISSSVRSNPFDLTTKATGTSPATSS 314
Query: 340 XXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFNQXXX 161
G R+ S+SAGGT* PLYFI SF STM ++ SS * SPV N
Sbjct: 313 F*GTTAASAIDGWVMRMASNSAGGT*KPLYFIISFTLSTMKTSSSSSI*PISPVCNHPSS 134
Query: 160 XXXXXXXXXXXXXPFMTTGPRTQSSP 83
PF+ GP Q SP
Sbjct: 133 SIVLAVDSASFRYPFIIWGPLMQISP 56
>gb|CO367090.1|CO367090 RTK1_32_C09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_C09_A029 3', mRNA sequence
Length = 834
Score = 239 bits (516), Expect = 2e-062
Identities = 98/174 (56%), Positives = 128/174 (73%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI P TG L Q GE+ +RGP +MKGY+ D E+TA T+D +GWL T
Sbjct: 79 SCGTVVRNAQMKIAHPDTGASLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 258
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDRLKE+IKYKG+QVPPAELE IL +HP I DAAVIP DE AG++
Sbjct: 259 GDIGYIDDDDEVFIVDRLKEIIKYKGFQVPPAELEDILITHPSIADAAVIPQRDEVAGEV 438
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
P+AF+VR G ++TE + FVAKQV YKK+ +V F+ IPKSPAGKILR++L
Sbjct: 439 PVAFVVRSNGFDVTEDDIKQFVAKQVVFYKKLHKVYFIHGIPKSPAGKILRKDL 600
>dbj|BD224542.1| Materials and methods for the modification of plant lignin content
Length = 2043
Score = 237 bits (513), Expect = 5e-062
Identities = 96/172 (55%), Positives = 129/172 (75%)
Frame = +3 / +2
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGD 188
G + + E KIVDP TG L Q GE+ +RG +MKGY+ D EATA T+D EGWL TGD
Sbjct: 1169 GTVVRNAEMKIVDPETGASLPRNQAGEICIRGHQIMKGYLNDAEATANTIDKEGWLHTGD 1348
Query: 189 LCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPM 368
+ Y ++D L+IVDRLKELIKYKG+QV PAELE +L +HP I DAAV+P DE AG++P+
Sbjct: 1349 IGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPSISDAAVVPMKDEVAGEVPV 1528
Query: 369 AFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
AF+V+ GS +TE ++ +++KQV YK+++RV F AIPK+P+GKILR++L
Sbjct: 1529 AFVVKSNGSVITEDEIKQYISKQVVFYKRIKRVFFTDAIPKAPSGKILRKDL 1684
>gb|CF402601.1|CF402601 RTWW1_21_D04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_21_D04_A015 5', mRNA sequence
Length = 771
Score = 236 bits (510), Expect = 1e-061
Identities = 95/172 (55%), Positives = 127/172 (73%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+DP TG L Q GE+ +RGP +MKGY+ D E+TA T+D +GWL T
Sbjct: 187 SCGTVVRNAQMKIIDPDTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 366
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QVPPAELE IL +HP I DAAV+P DE AG++
Sbjct: 367 GDIGYIDDDEEVFIVDRVKEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEV 546
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRR 518
P+AF+VR G +LTE ++ FVAKQV YKK+ +V F+ AIPKSP+GK R
Sbjct: 547 PVAFVVRSNGFDLTEDEIKQFVAKQVVFYKKLHKVYFIHAIPKSPSGKYCER 702
Score = 101 bits (216), Expect = 5e-021
Identities = 61/141 (43%), Positives = 70/141 (49%)
Frame = -2 / -2
Query: 505 FPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXXXXXXX 326
FP GDLGIA K T +FL* TCLAT + SVR +P LT KA G+ P
Sbjct: 689 FPEGDLGIAWMK*TLCSFL*NTTCLATNCLISSSVRSNPFDLTTKATGTSPATSSF*GTT 510
Query: 325 XXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFNQXXXXXXXX 146
G R+ S+SAGGT* PLYFI SF STM ++ SS * SPV N
Sbjct: 509 AASAIDGWVMRMASNSAGGT*KPLYFIISFTLSTMKTSSSSSI*PISPVCNHPSSSIVLA 330
Query: 145 XXXXXXXXPFMTTGPRTQSSP 83
PF+ GP Q SP
Sbjct: 329 VDSASFRYPFIIWGPLMQISP 267
>gb|CO362125.1|CO362125 RTK1_1_A01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_1_A01_A029 5', mRNA sequence
Length = 529
Score = 232 bits (500), Expect = 3e-060
Identities = 93/150 (62%), Positives = 120/150 (80%)
Frame = +3 / +3
Query: 93 WVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVP 272
W+RGP +M GY + AT T+D+EGWL TGD+ YF+E+G L+IVDR+KELIKYKG+QV
Sbjct: 3 WLRGPNIMTGYFNNPSATKITLDTEGWLHTGDMGYFDEEGGLFIVDRIKELIKYKGFQVA 182
Query: 273 PAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYK 452
PAELE IL +HP I DA VIP PD AG++P+A++VR PGS+LTE+ MD+VAKQVAP+K
Sbjct: 183 PAELEGILLTHPQIADAGVIPLPDLKAGEVPIAYVVRTPGSSLTEKDAMDYVAKQVAPFK 362
Query: 453 KVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
++ RV F+ +IPKS +GKILRREL+ A S
Sbjct: 363 RLHRVNFMDSIPKSSSGKILRRELIAKAKS 452
>gb|DR742648.1|DR742648 RTCU1_5_D01.g2_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_5_D01_A029 5', mRNA sequence
Length = 748
Score = 230 bits (497), Expect = 8e-060
Identities = 91/143 (63%), Positives = 117/143 (81%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG LA + EAKIVDP +G L P +RGELW+RG VMKGY + EATA+ ++ GWL+T
Sbjct: 320 SVGMLAPNTEAKIVDPESGTPLPPNKRGELWLRGQFVMKGYFNNPEATASALNVHGWLRT 499
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GDLCY +++G L++VDRLKELIKYKGYQV PAELE +L SHP+I +AAVIP+PD++AGQ+
Sbjct: 500 GDLCYIDDEGYLFVVDRLKELIKYKGYQVAPAELEALLLSHPEIAEAAVIPFPDKEAGQV 679
Query: 363 PMAFIVRKPGSNLTEQQVMDFVA 431
PMA+IV+KPG ++E V+DFVA
Sbjct: 680 PMAYIVQKPGKTVSETNVIDFVA 748
Score = 103 bits (220), Expect = 1e-021
Identities = 62/143 (43%), Positives = 71/143 (49%)
Frame = -2 / -2
Query: 430 ATKSMTCCSVRFDPGFLTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLY 251
ATKS+T S PGF T+ A+G+ P G*E R SSSAG T PLY
Sbjct: 747 ATKSITLVSDTVLPGFCTMYAMGTWPASLSGNGITAASAISG*ESRSASSSAGATW*PLY 568
Query: 250 FINSFNRSTM*SNPSSLK*HRSPVFNQXXXXXXXXXXXXXXXXPFMTTGPRTQSSPRCPG 71
INSFN ST PSS *HRSPV +Q PF+T PR+ +SP G
Sbjct: 567 LINSFNLSTTKR*PSSSM*HRSPVRSQPCTFRAEAVASGLLKYPFITNWPRSHNSPLLFG 388
Query: 70 PSTSPVEGSTIFASKCDASFPTE 2
P GSTI AS A+ PTE
Sbjct: 387 GRGVPDSGSTILASVFGANMPTE 319
>gb|CF402026.1|CF402026 RTWW1_16_B04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_16_B04_A015 5', mRNA sequence
Length = 734
Score = 229 bits (495), Expect = 2e-059
Identities = 92/165 (55%), Positives = 123/165 (74%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+DP TG L Q GE+ +RGP +MKGY+ D E+TA T+D +GWL T
Sbjct: 239 SCGTVVRNAQMKIIDPDTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 418
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QVPPAELE IL +HP I DAAV+P DE AG++
Sbjct: 419 GDIGYIDDDEEVFIVDRVKEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEV 598
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSP 497
P+AF+VR G +LTE ++ FVAKQV YKK+ +V F+ AIPKSP
Sbjct: 599 PVAFVVRSNGFDLTEDEIKQFVAKQVVFYKKLHKVYFIHAIPKSP 733
>gb|CF473738.1|CF473738 RTWW2_4_E01.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_4_E01_A021 5', mRNA sequence
Length = 623
Score = 229 bits (495), Expect = 2e-059
Identities = 92/165 (55%), Positives = 123/165 (74%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+DP TG L Q GE+ +RGP +MKGY+ D E+TA T+D +GWL T
Sbjct: 129 SCGTVVRNAQMKIIDPDTGTCLPYNQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHT 308
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QVPPAELE IL +HP I DAAV+P DE AG++
Sbjct: 309 GDIGYIDDDEEVFIVDRVKEIIKYKGFQVPPAELEAILITHPSIADAAVVPQKDEVAGEV 488
Query: 363 PMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSP 497
P+AF+VR G +LTE ++ FVAKQV YKK+ +V F+ AIPKSP
Sbjct: 489 PVAFVVRSNGFDLTEDEIKQFVAKQVVFYKKLHKVYFIHAIPKSP 623
>gb|U12013.1|PTU12013 Pinus taeda PT4CL2 4-coumarate-CoA ligase enzyme mRNA, complete cds
Length = 1972
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 1217 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 1396
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 1397 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 1576
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 1577 PVAFVVK 1597
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +2
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 1601 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 1732
>dbj|BD224332.1| Materials and methods for the modification of plant lignin content
Length = 1961
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 1176 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 1355
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 1356 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 1535
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 1536 PVAFVVK 1556
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +3
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 1560 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 1691
>dbj|BD224366.1| Materials and methods for the modification of plant lignin content
Length = 1960
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 1175 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 1354
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 1355 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 1534
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 1535 PVAFVVK 1555
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +2
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 1559 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 1690
>dbj|BD272988.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 1961
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 1176 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 1355
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 1356 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 1535
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 1536 PVAFVVK 1556
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +3
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 1560 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 1691
>gb|DR092999.1|DR092999 STRR1_5_A01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_A01_A033 5', mRNA sequence
Length = 920
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 235 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 414
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 415 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 594
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 595 PVAFVVK 615
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 619 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 750
>gb|DR092921.1|DR092921 STRR1_5_A01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_A01_A033 3', mRNA sequence
Length = 858
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 116 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 295
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 296 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 475
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 476 PVAFVVK 496
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +2
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 500 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 631
>gb|DR069800.1|DR069800 RTDK1_9_B09.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_9_B09_A029 5', mRNA sequence
Length = 854
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 76 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 255
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 256 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 435
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 436 PVAFVVK 456
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 460 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 591
>gb|CO201630.1|CO201630 RTCNT2_7_C08.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_7_C08_A029 3', mRNA sequence
Length = 852
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 78 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 257
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 258 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 437
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 438 PVAFVVK 458
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +3
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 462 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 593
>gb|CO201703.1|CO201703 RTCNT2_7_C08.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_7_C08_A029 5', mRNA sequence
Length = 845
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 158 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 337
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 338 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 517
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 518 PVAFVVK 538
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +2
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 542 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 673
>gb|CO166419.1|CO166419 FLD1_61_H04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_61_H04_A029 5', mRNA sequence
Length = 843
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 184 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 363
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 364 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 543
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 544 PVAFVVK 564
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 568 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 699
>gb|DR744549.1|DR744549 RTCU1_23_E12.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_E12_A029 3', mRNA sequence
Length = 799
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 126 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 305
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 306 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 485
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 486 PVAFVVK 506
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +3
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 510 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 641
>gb|DR019282.1|DR019282 STRS1_28_H10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_H10_A034 5', mRNA sequence
Length = 791
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 274 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 453
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 454 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 633
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 634 PVAFVVK 654
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 658 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 789
>gb|DR101975.1|DR101975 STRR1_77_E04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_77_E04_A033 3', mRNA sequence
Length = 784
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 32 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 211
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 212 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 391
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 392 PVAFVVK 412
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +2
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 416 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 547
>gb|CO159169.1|CO159169 FLD1_11_H06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_11_H06_A029 5', mRNA sequence
Length = 781
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 38 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 217
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 218 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 397
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 398 PVAFVVK 418
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +2
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 422 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 553
>gb|CF402273.1|CF402273 RTWW1_19_G06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_19_G06_A015 5', mRNA sequence
Length = 738
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 117 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 296
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 297 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 476
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 477 PVAFVVK 497
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +3
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 501 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 632
>gb|CF399865.1|CF399865 RTWW1_1_F04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_1_F04_A015 5', mRNA sequence
Length = 728
Score = 177 bits (382), Expect(2) = 6e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 64 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 243
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 244 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 423
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 424 PVAFVVK 444
Score = 70.3 bits (147), Expect(2) = 6e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 448 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 579
>gb|U12012.1|PTU12012 Pinus taeda PT4CL1 4-coumarate-CoA ligase enzyme mRNA, complete cds
Length = 1969
Score = 177 bits (381), Expect(2) = 9e-059
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 1217 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 1396
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 1397 GDVEYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 1576
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 1577 PVAFVVK 1597
Score = 70.3 bits (147), Expect(2) = 9e-059
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +2
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 1601 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 1732
>gb|CX645793.1|CX645793 COLD1_5_G11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_5_G11_A029 3', mRNA sequence
Length = 821
Score = 226 bits (489), Expect = 1e-058
Identities = 90/135 (66%), Positives = 118/135 (87%)
Frame = +3 / +1
Query: 138 EATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIM 317
EAT +T++S+ L+TGDLCY +++G +++VDRLKELIKYKGYQV PAELE +L+SHP+IM
Sbjct: 10 EATTSTLNSDVXLRTGDLCYVDDEGYIFVVDRLKELIKYKGYQVAPAELEALLHSHPEIM 189
Query: 318 DAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSP 497
D AVIP+PD++AGQ+PMA+IVRKPG L+E V++FVA+QVAPYKKVR VAFVS IPK+
Sbjct: 190 DVAVIPFPDKEAGQVPMAYIVRKPGGTLSESSVINFVAQQVAPYKKVRHVAFVSEIPKNA 369
Query: 498 AGKILRRELVEXAVS 542
AGKILR++L++ A S
Sbjct: 370 AGKILRKDLIKLATS 414
Score = 110 bits (235), Expect = 1e-023
Identities = 65/140 (46%), Positives = 75/140 (53%)
Frame = -2 / -1
Query: 598 LLDFDVSINFKLQSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKS 419
+L F+ + L + ++ A S IFPA GI+ TKAT RTFL GATC ATK
Sbjct: 470 ILFFNKQMKPILPHMHQSLEVASLIKSFLNIFPAAFFGISLTKAT*RTFLYGATC*ATKL 291
Query: 418 MTCCSVRFDPGFLTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINS 239
+T S PGFLTI AIG+ P G*E R S+SAG T PLY INS
Sbjct: 290 ITLLSDSVPPGFLTIYAIGTWPASLSGNGITATSIISG*ECRSASNSAGATW*PLYLINS 111
Query: 238 FNRSTM*SNPSSLK*HRSPV 179
FN ST PSS * RSPV
Sbjct: 110 FNLSTTKM*PSSST*QRSPV 51
>gb|BX784216.1|BX784216 BX784216 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 130G11 similar to 4-coumarate--CoA ligase (EC
6.2.1.12), mRNA sequence
Length = 707
Score = 176 bits (378), Expect(2) = 2e-058
Identities = 68/127 (53%), Positives = 95/127 (74%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 7 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 186
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+ G++
Sbjct: 187 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEETGEV 366
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 367 PVAFVVK 387
Score = 70.3 bits (147), Expect(2) = 2e-058
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 391 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 522
>gb|DR079127.1|DR079127 RTFEPL1_9_F05.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_F05_A029 3', mRNA sequence
Length = 895
Score = 225 bits (486), Expect = 3e-058
Identities = 91/159 (57%), Positives = 121/159 (76%)
Frame = +3 / -2
Query: 48 PSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIV 227
P G V Q GE+ +RGP +MKGY+ D E+TA T+D +GWL TGD+ Y ++D ++IV
Sbjct: 864 PRHGHVSSLHQPGEICIRGPQIMKGYLNDAESTARTIDEDGWLHTGDIGYIDDDEEVFIV 685
Query: 228 DRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTE 407
DR+KE+IKYK +QVPPAELE IL +HP I DAAV+P DE AG++P+AF+VR G +LTE
Sbjct: 684 DRVKEIIKYKDFQVPPAELEAILITHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFDLTE 505
Query: 408 QQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
++ FVAKQV YKK+ +V F+ AIPKSP+GKILR++L
Sbjct: 504 DEIKQFVAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDL 388
Score = 105 bits (224), Expect = 4e-022
Identities = 66/158 (41%), Positives = 75/158 (47%)
Frame = -2 / +2
Query: 520 SRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCPXXXX 341
S R IFP GDLGIA K T +FL* TCLAT + SVR +P LT KA G+ P
Sbjct: 392 SFRSIFPEGDLGIAWMK*TLCSFL*NTTCLATNCLISSSVRSNPFDLTTKATGTSPATSS 571
Query: 340 XXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRSTM*SNPSSLK*HRSPVFNQXXX 161
G R+ S+SAGGT* LYFI SF STM ++ SS * SPV N
Sbjct: 572 F*GTTAASAIDGWVMRMASNSAGGT*KSLYFIISFTLSTMKTSSSSSI*PISPVCNHPSS 751
Query: 160 XXXXXXXXXXXXXPFMTTGPRTQSSPRCPGPSTSPVEG 47
PF+ GP Q SP T P G
Sbjct: 752 SIVLAVDSASFRYPFIIWGPLMQISPGWCREDTCPCRG 865
>gb|DR116726.1|DR116726 RTMG1_2_A01.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_2_A01_A029 5', mRNA sequence
Length = 753
Score = 177 bits (382), Expect(2) = 3e-058
Identities = 69/127 (54%), Positives = 96/127 (75%)
Frame = +3 / +2
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 92 SCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHT 271
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 272 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 451
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 452 PVAFVVK 472
Score = 68.0 bits (142), Expect(2) = 3e-058
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = +3 / +2
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAK V YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 476 SEISEQEIKEFVAKHVIFYKKIHRVYFVDAIPKSPSGKILRKDL 607
>gb|DR019194.1|DR019194 STRS1_28_H10.b2_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_H10_A034 3', mRNA sequence
Length = 836
Score = 175 bits (376), Expect(2) = 4e-058
Identities = 68/127 (53%), Positives = 95/127 (74%)
Frame = +3 / +1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
S G + + + KI+D TGE L Q G + +RGP +MKGY+ D E+TAAT+D EGWL T
Sbjct: 88 SCGTVVRNAQIKILDTETGESLPHNQAGXICIRGPEIMKGYINDPESTAATIDEEGWLHT 267
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQL 362
GD+ Y ++D ++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++
Sbjct: 268 GDVGYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEV 447
Query: 363 PMAFIVR 383
P+AF+V+
Sbjct: 448 PVAFVVK 468
Score = 70.3 bits (147), Expect(2) = 4e-058
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 472 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 603
>gb|CO362045.1|CO362045 NDL2_8_G01.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_G01_A029 5', mRNA sequence
Length = 749
Score = 174 bits (374), Expect(2) = 8e-058
Identities = 67/118 (56%), Positives = 92/118 (77%)
Frame = +3 / -3
Query: 30 EAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNED 209
+ KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL TGD+ Y ++D
Sbjct: 729 QIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVGYIDDD 550
Query: 210 GLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVR 383
++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++P+AF+V+
Sbjct: 549 EEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVK 376
Score = 70.3 bits (147), Expect(2) = 8e-058
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / -3
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 372 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 241
>gb|CV032697.1|CV032697 RTNACL1_17_F12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_17_F12_A029 5', mRNA sequence
Length = 733
Score = 174 bits (374), Expect(2) = 8e-058
Identities = 67/118 (56%), Positives = 92/118 (77%)
Frame = +3 / -1
Query: 30 EAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNED 209
+ KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL TGD+ Y ++D
Sbjct: 721 QIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVGYIDDD 542
Query: 210 GLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVR 383
++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++P+AF+V+
Sbjct: 541 EEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVK 368
Score = 70.3 bits (147), Expect(2) = 8e-058
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / -1
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 364 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 233
>gb|DR101893.1|DR101893 STRR1_76_C02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_76_C02_A033 5', mRNA sequence
Length = 664
Score = 174 bits (374), Expect(2) = 8e-058
Identities = 67/118 (56%), Positives = 92/118 (77%)
Frame = +3 / -2
Query: 30 EAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNED 209
+ KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL TGD+ Y ++D
Sbjct: 654 QIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVGYIDDD 475
Query: 210 GLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVR 383
++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++P+AF+V+
Sbjct: 474 EEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVK 301
Score = 70.3 bits (147), Expect(2) = 8e-058
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / -2
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 297 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 166
>gb|CF401996.1|CF401996 RTWW1_16_D03.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_16_D03_A015 5', mRNA sequence
Length = 718
Score = 173 bits (373), Expect(2) = 1e-057
Identities = 67/116 (57%), Positives = 91/116 (78%)
Frame = +3 / +1
Query: 36 KIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGL 215
KI+D TGE L Q GE+ +RGP +MKGY+ D E+TAAT+D EGWL TGD+ Y ++D
Sbjct: 4 KILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVGYIDDDEE 183
Query: 216 LYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVR 383
++IVDR+KE+IKYKG+QV PAELE +L +HP I DAAV+P E+AG++P+AF+V+
Sbjct: 184 IFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVK 351
Score = 70.3 bits (147), Expect(2) = 1e-057
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 393 SNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
S ++EQ++ +FVAKQV YKK+ RV FV AIPKSP+GKILR++L
Sbjct: 355 SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDL 486
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 367,687,277
Number of Sequences: 355925
Number of extensions: 4641339
Number of successful extensions: 33568
Number of sequences better than 1.0e-020: 256
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 10891364290
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)