TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.76
(854 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX251219.1|BX251219 BX251219 Pinus pinaster differenciat... 303 2e-081
gb|BQ655396.1|BQ655396 NXRV093_G12_F NXRV (Nsf Xylem Root w... 303 2e-081
gb|CF471465.1|CF471465 RTDS1_3_D12.g1_A015 Drought-stressed... 303 2e-081
gb|DR017432.1|DR017432 STRS1_16_F08.b1_A034 Shoot tip pitch... 303 2e-081
gb|BX248887.1|BX248887 BX248887 Pinus pinaster differenciat... 302 2e-081
gb|BX251714.1|BX251714 BX251714 Pinus pinaster differenciat... 302 2e-081
gb|BQ290635.1|BQ290635 NXRV047_G02_F NXRV (Nsf Xylem Root w... 302 2e-081
gb|BX680677.1|BX680677 BX680677 RS Pinus pinaster cDNA clon... 302 2e-081
gb|CX646651.1|CX646651 COLD1_10_D10.g1_A029 Root cold Pinus... 302 2e-081
gb|AI812314.1|AI812314 10G11 Pine Lambda Zap Xylem library ... 302 3e-081
gb|BG040034.1|BG040034 NXSI_105_F01_F NXSI (Nsf Xylem Side ... 302 3e-081
gb|CX646570.1|CX646570 COLD1_10_D10.b1_A029 Root cold Pinus... 300 1e-080
gb|DR099679.1|DR099679 STRR1_57_G07.b1_A033 Stem Response R... 300 1e-080
gb|BF777504.1|BF777504 NXSI_069_D02_F NXSI (Nsf Xylem Side ... 298 3e-080
gb|BQ701703.1|BQ701703 NXSI_118_F02_F NXSI (Nsf Xylem Side ... 297 5e-080
gb|BG040107.1|BG040107 NXSI_106_E05_F NXSI (Nsf Xylem Side ... 297 7e-080
gb|CF393312.1|CF393312 RTDR3_20_F05.g1_A022 Loblolly pine r... 297 7e-080
gb|DR165451.1|DR165451 RTPHOS1_5_E03.b1_A029 Roots minus ph... 297 7e-080
gb|BX681409.1|BX681409 BX681409 RS Pinus pinaster cDNA clon... 295 3e-079
gb|BG040210.1|BG040210 NXSI_109_G05_F NXSI (Nsf Xylem Side ... 294 5e-079
gb|BM493700.1|BM493700 NXLV_069_D07_F NXLV (Nsf Xylem Late ... 294 6e-079
gb|BQ655437.1|BQ655437 NXRV094_E08_F NXRV (Nsf Xylem Root w... 292 2e-078
gb|AW010252.1|AW010252 ST03H04 Pine TriplEx shoot tip libra... 289 2e-077
gb|BF186098.1|BF186098 NXCI_132_F08_F NXCI (Nsf Xylem Compr... 288 4e-077
gb|DR017515.1|DR017515 STRS1_16_F08.g1_A034 Shoot tip pitch... 286 1e-076
gb|DR092418.1|DR092418 STRR1_1_F10.b1_A033 Stem Response Re... 284 7e-076
gb|AW289988.1|AW289988 NXNV009F02F Nsf Xylem Normal wood Ve... 282 2e-075
gb|CD026680.1|CD026680 NXNV009F02 Nsf Xylem Normal wood Ver... 282 2e-075
gb|DR165532.1|DR165532 RTPHOS1_5_E03.g1_A029 Roots minus ph... 275 3e-073
gb|CO161902.1|CO161902 FLD1_31_H08.g1_A029 Root flooded Pin... 271 4e-072
gb|BX678785.1|BX678785 BX678785 RS Pinus pinaster cDNA clon... 269 2e-071
gb|BF169524.1|BF169524 NXCI_123_E10_F NXCI (Nsf Xylem Compr... 260 7e-069
gb|DR092505.1|DR092505 STRR1_1_F10.g1_A033 Stem Response Re... 260 1e-068
gb|DR161363.1|DR161363 RTFE1_11_H04.b1_A029 Roots minus iro... 247 1e-064
gb|BM902671.1|BM902671 NXLV_057_E11_F NXLV (Nsf Xylem Late ... 243 9e-064
gb|DR161452.1|DR161452 RTFE1_11_H04.g1_A029 Roots minus iro... 236 2e-061
gb|DR386126.1|DR386126 RTHG1_13_D02.b1_A029 Roots plus adde... 230 3e-061
gb|BQ290853.1|BQ290853 NXRV050_D12_F NXRV (Nsf Xylem Root w... 221 5e-059
gb|DR079692.1|DR079692 RTFEPL1_12_H12.g1_A029 Roots plus ad... 226 1e-058
gb|BF221431.1|BF221431 NXCI_165_F05_F NXCI (Nsf Xylem Compr... 221 4e-057
gb|DR386206.1|DR386206 RTHG1_13_D02.g1_A029 Roots plus adde... 213 2e-056
gb|BM158593.1|BM158593 NXLV_036_F07_F NXLV (Nsf Xylem Late ... 215 3e-055
gb|DR743078.1|DR743078 RTCU1_13_H11.b1_A029 Roots plus adde... 213 1e-054
gb|AW755225.1|AW755225 PC12F04 Pine TriplEx pollen cone lib... 210 8e-054
gb|BQ698758.1|BQ698758 NXNV_063_C12_F Nsf Xylem Normal wood... 208 4e-053
gb|BX680665.1|BX680665 BX680665 RS Pinus pinaster cDNA clon... 204 9e-052
gb|AA556209.1|AA556209 64 Loblolly pine N Pinus taeda cDNA ... 143 3e-049
gb|BQ700146.1|BQ700146 NXRV101_G05_F NXRV (Nsf Xylem Root w... 192 3e-048
gb|CO160608.1|CO160608 FLD1_22_F04.b1_A029 Root flooded Pin... 177 2e-045
gb|DR080556.1|DR080556 RTFEPL1_23_C02.g1_A029 Roots plus ad... 177 2e-045
gb|DN462611.1|DN462611 EST958410 Sequencing ESTs from loblo... 177 2e-045
gb|DT626880.1|DT626880 EST1159956 Sequencing ESTs from lobl... 177 2e-045
gb|CV146023.1|CV146023 EST857232 Sequencing ESTs from loblo... 177 2e-045
gb|DN448651.1|DN448651 EST944450 Sequencing ESTs from loblo... 177 2e-045
gb|DN461287.1|DN461287 EST957086 Sequencing ESTs from loblo... 177 2e-045
gb|CV143614.1|CV143614 EST854823 Sequencing ESTs from loblo... 177 2e-045
gb|DN449600.1|DN449600 EST945399 Sequencing ESTs from loblo... 177 2e-045
gb|DR021250.1|DR021250 STRS1_43_H08.b1_A034 Shoot tip pitch... 177 2e-045
gb|DR016170.1|DR016170 STRS1_8_E04.b1_A034 Shoot tip pitch ... 177 2e-045
gb|AL750618.1|AL750618 AL750618 RN Pinus pinaster cDNA clon... 177 2e-045
gb|DR016225.1|DR016225 STRS1_8_E04.g1_A034 Shoot tip pitch ... 177 2e-045
gb|DT624768.1|DT624768 EST1158863 Sequencing ESTs from lobl... 177 2e-045
gb|BX784078.1|BX784078 BX784078 Pinus pinaster differenciat... 177 2e-045
gb|AL750482.1|AL750482 AL750482 RN Pinus pinaster cDNA clon... 177 2e-045
gb|BQ702401.1|BQ702401 NXSI_128_C02_F NXSI (Nsf Xylem Side ... 177 2e-045
gb|AW290360.1|AW290360 NXNV018E03F Nsf Xylem Normal wood Ve... 177 2e-045
gb|CD026988.1|CD026988 NXNV018E03 Nsf Xylem Normal wood Ver... 177 2e-045
gb|BF186340.1|BF186340 NXCI_136_F06_F NXCI (Nsf Xylem Compr... 177 2e-045
gb|AW056503.1|AW056503 ST52F05 Pine TriplEx shoot tip libra... 177 3e-045
gb|BE451965.1|BE451965 NXCI_006_H03_F NXCI (Nsf Xylem Compr... 177 5e-045
gb|BX253151.1|BX253151 BX253151 Pinus pinaster differenciat... 177 7e-045
gb|BF609474.1|BF609474 NXSI_043_A07_F NXSI (Nsf Xylem Side ... 177 7e-045
gb|AW587605.1|AW587605 ST60D11 Pine TriplEx shoot tip libra... 177 7e-045
gb|BQ701709.1|BQ701709 NXSI_118_F12_F NXSI (Nsf Xylem Side ... 177 7e-045
gb|DR021328.1|DR021328 STRS1_43_H08.g1_A034 Shoot tip pitch... 175 9e-045
gb|AW984968.1|AW984968 NXNV_106_G05_F Nsf Xylem Normal wood... 180 1e-044
gb|BX678267.1|BX678267 BX678267 RN Pinus pinaster cDNA clon... 180 1e-044
gb|DR020336.1|DR020336 STRS1_36_F01.b1_A034 Shoot tip pitch... 175 1e-044
gb|DR098420.1|DR098420 STRR1_45_H04.b1_A033 Stem Response R... 177 1e-044
gb|CX646203.1|CX646203 COLD1_7_H11.g1_A029 Root cold Pinus ... 177 1e-044
gb|CX648809.1|CX648809 COLD1_31_C07.b1_A029 Root cold Pinus... 177 1e-044
gb|AW226021.1|AW226021 ST76D09 Pine TriplEx shoot tip libra... 180 1e-044
gb|CF391864.1|CF391864 RTDR3_10_A09.g1_A022 Loblolly pine r... 180 1e-044
gb|CF392866.1|CF392866 RTDR3_19_G01.g1_A022 Loblolly pine r... 180 1e-044
gb|CO160764.1|CO160764 FLD1_24_D02.b1_A029 Root flooded Pin... 180 1e-044
gb|CO176545.1|CO176545 NDL1_62_D09.g1_A029 Needles control ... 180 1e-044
gb|CO200355.1|CO200355 GEO2_7_A07.b1_A032 Root gravitropism... 180 1e-044
gb|CO363796.1|CO363796 RTK1_11_G12.g1_A029 Roots minus pota... 180 1e-044
gb|CO367018.1|CO367018 RTK1_31_D09.g1_A029 Roots minus pota... 180 1e-044
gb|CX645914.1|CX645914 COLD1_6_C02.b1_A029 Root cold Pinus ... 180 1e-044
gb|CX646206.1|CX646206 COLD1_8_A02.b1_A029 Root cold Pinus ... 180 1e-044
gb|CX647009.1|CX647009 COLD1_12_H05.g1_A029 Root cold Pinus... 180 1e-044
gb|DN628483.1|DN628483 EST979299 Subtracted pine embryo lib... 180 1e-044
gb|DR093402.1|DR093402 STRR1_8_B12.b1_A033 Stem Response Re... 180 1e-044
gb|DR097730.1|DR097730 STRR1_36_D07.g3_A033 Stem Response R... 177 1e-044
gb|CX713233.1|CX713233 RTPQ1_7_G03.g1_A032 Roots treated wi... 177 1e-044
gb|CX713148.1|CX713148 RTPQ1_7_G03.b1_A032 Roots treated wi... 177 1e-044
gb|CO197258.1|CO197258 GEO1_5_A09.b1_A029 Root gravitropism... 177 2e-044
gb|DR014762.1|DR014762 HEAT1_51_A12.g1_A029 Root at 37 C fo... 177 2e-044
gb|BX249082.1|BX249082 BX249082 Pinus pinaster differenciat... 179 2e-044
gb|BX249089.1|BX249089 BX249089 Pinus pinaster differenciat... 179 2e-044
gb|DR048226.1|DR048226 RTBOR1_7_H10.b2_A029 Roots plus adde... 179 2e-044
gb|DR050081.1|DR050081 RTBOR1_21_D12.b1_A029 Roots plus add... 179 2e-044
gb|AI812308.1|AI812308 10F11 Pine Lambda Zap Xylem library ... 149 2e-044
gb|AI725204.1|AI725204 1223 PtIFG2 Pinus taeda cDNA clone 9... 179 3e-044
gb|AI812688.1|AI812688 17H5 Pine Lambda Zap Xylem library P... 179 3e-044
gb|AI813113.1|AI813113 23B10 Pine Lambda Zap Xylem library ... 179 3e-044
gb|AI920204.1|AI920204 1734 Pine Lambda Zap Xylem library P... 179 3e-044
gb|AW010204.1|AW010204 ST03C11 Pine TriplEx shoot tip libra... 179 3e-044
gb|AW011135.1|AW011135 ST17B04 Pine TriplEx shoot tip libra... 179 3e-044
gb|AL749933.1|AL749933 AL749933 AS Pinus pinaster cDNA clon... 179 3e-044
gb|AL749934.1|AL749934 AL749934 AS Pinus pinaster cDNA clon... 179 3e-044
gb|AL750606.1|AL750606 AL750606 RN Pinus pinaster cDNA clon... 179 3e-044
gb|AL750702.1|AL750702 AL750702 RN Pinus pinaster cDNA clon... 179 3e-044
gb|AL750737.1|AL750737 AL750737 RN Pinus pinaster cDNA clon... 179 3e-044
gb|BX249153.1|BX249153 BX249153 Pinus pinaster differenciat... 179 3e-044
gb|BX249488.1|BX249488 BX249488 Pinus pinaster differenciat... 179 3e-044
gb|BX249844.1|BX249844 BX249844 Pinus pinaster differenciat... 179 3e-044
gb|BX250157.1|BX250157 BX250157 Pinus pinaster differenciat... 179 3e-044
gb|BX250212.1|BX250212 BX250212 Pinus pinaster differenciat... 179 3e-044
gb|BX250278.1|BX250278 BX250278 Pinus pinaster differenciat... 179 3e-044
gb|BX250361.1|BX250361 BX250361 Pinus pinaster differenciat... 179 3e-044
gb|BX251257.1|BX251257 BX251257 Pinus pinaster differenciat... 179 3e-044
gb|BX251860.1|BX251860 BX251860 Pinus pinaster differenciat... 179 3e-044
gb|BX252320.1|BX252320 BX252320 Pinus pinaster differenciat... 179 3e-044
gb|BX252929.1|BX252929 BX252929 Pinus pinaster differenciat... 179 3e-044
gb|BX253024.1|BX253024 BX253024 Pinus pinaster differenciat... 179 3e-044
gb|BX253144.1|BX253144 BX253144 Pinus pinaster differenciat... 179 3e-044
gb|BX253732.1|BX253732 BX253732 Pinus pinaster differenciat... 179 3e-044
gb|BX253826.1|BX253826 BX253826 Pinus pinaster differenciat... 179 3e-044
gb|BX254677.1|BX254677 BX254677 Pinus pinaster differenciat... 179 3e-044
gb|BX255397.1|BX255397 BX255397 Pinus pinaster differenciat... 179 3e-044
gb|BX255585.1|BX255585 BX255585 Pinus pinaster differenciat... 179 3e-044
gb|AW869994.1|AW869994 NXNV_120_G10_F Nsf Xylem Normal wood... 179 3e-044
gb|AW870106.1|AW870106 NXNV_124_B10_F Nsf Xylem Normal wood... 179 3e-044
gb|BE457978.1|BE457978 NXCI_008_G10_F NXCI (Nsf Xylem Compr... 179 3e-044
gb|BE496388.1|BE496388 NXCI_017_C06_F NXCI (Nsf Xylem Compr... 179 3e-044
gb|BE582354.1|BE582354 NXCI_032_D06_F NXCI (Nsf Xylem Compr... 179 3e-044
gb|BF609303.1|BF609303 NXSI_042_G04_F NXSI (Nsf Xylem Side ... 179 3e-044
gb|BF610472.1|BF610472 NXSI_058_H05_F NXSI (Nsf Xylem Side ... 179 3e-044
gb|BG040442.1|BG040442 NXSI_108_C07_F NXSI (Nsf Xylem Side ... 179 3e-044
gb|BG040455.1|BG040455 NXSI_108_D09_F NXSI (Nsf Xylem Side ... 179 3e-044
gb|BG275278.1|BG275278 NXSI_138_H08_F NXSI (Nsf Xylem Side ... 179 3e-044
gb|BG275748.1|BG275748 NXSI_145_D09_F NXSI (Nsf Xylem Side ... 179 3e-044
gb|BG317980.1|BG317980 NXPV_008_B08_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BG318102.1|BG318102 NXPV_010_E06_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BG318242.1|BG318242 NXPV_009_C11_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BG318868.1|BG318868 NXPV_020_H03_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BG673841.1|BG673841 NXPV_075_G08_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BG832495.1|BG832495 NXPV_073_E07_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BG832873.1|BG832873 NXPV_081_G07_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BI077078.1|BI077078 NXPV_087_B10_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BI397697.1|BI397697 NXPV_104_C02_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BM158547.1|BM158547 NXLV_036_A04_F NXLV (Nsf Xylem Late ... 179 3e-044
gb|BM427681.1|BM427681 NXRV_001_D12_F NXRV (Nsf Xylem Root ... 179 3e-044
gb|BM492365.1|BM492365 NXRV_023_C10_F NXRV (Nsf Xylem Root ... 179 3e-044
gb|BM492638.1|BM492638 NXRV_027_F09_F NXRV (Nsf Xylem Root ... 179 3e-044
gb|BM492676.1|BM492676 NXRV_029_F07_F NXRV (Nsf Xylem Root ... 179 3e-044
gb|BQ290509.1|BQ290509 NXRV045_B09_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ290579.1|BQ290579 NXRV047_A03_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ290961.1|BQ290961 NXRV051_H01_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ291199.1|BQ291199 NXRV057_B05_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ634475.1|BQ634475 NXRV069_D08_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ634781.1|BQ634781 NXRV073_B07_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ635227.1|BQ635227 NXRV079_F09_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ635274.1|BQ635274 NXRV078_C12_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ654616.1|BQ654616 NXRV083_A03_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ654917.1|BQ654917 NXRV087_G05_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ654927.1|BQ654927 NXRV087_H05_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ655194.1|BQ655194 NXRV091_C11_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ655421.1|BQ655421 NXRV094_C04_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ655513.1|BQ655513 NXRV095_F03_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ655679.1|BQ655679 NXRV097_G05_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ655841.1|BQ655841 NXRV100_A05_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ655887.1|BQ655887 NXRV100_E06_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ695779.1|BQ695779 NXPV_032_F01_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BQ695890.1|BQ695890 NXPV_033_H03_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BQ696012.1|BQ696012 NXPV_035_D06_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BQ696295.1|BQ696295 NXPV_037_F06_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BQ698029.1|BQ698029 NXPV_063_G02_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BQ698271.1|BQ698271 NXPV_065_F04_F NXPV (Nsf Xylem Plani... 179 3e-044
gb|BQ698889.1|BQ698889 NXRV116_G05_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ698916.1|BQ698916 NXRV117_A12_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ699493.1|BQ699493 NXRV123_A08_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ699529.1|BQ699529 NXRV123_D12_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ700179.1|BQ700179 NXRV102_B10_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ700247.1|BQ700247 NXRV103_B07_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ700575.1|BQ700575 NXRV108_D10_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ700724.1|BQ700724 NXRV110_E01_F NXRV (Nsf Xylem Root w... 179 3e-044
gb|BQ701677.1|BQ701677 NXSI_118_C10_F NXSI (Nsf Xylem Side ... 179 3e-044
gb|BQ703082.1|BQ703082 NXSI_136_C05_F NXSI (Nsf Xylem Side ... 179 3e-044
gb|CF386092.1|CF386092 RTDR1_8_C12.b1_A015 Loblolly pine ro... 179 3e-044
gb|CF388183.1|CF388183 RTDR2_1_E10.g1_A021 Loblolly pine ro... 179 3e-044
gb|CF388312.1|CF388312 RTDR2_2_E05.g1_A021 Loblolly pine ro... 179 3e-044
gb|CF388759.1|CF388759 RTDR2_15_D11.g1_A021 Loblolly pine r... 179 3e-044
gb|CF389448.1|CF389448 RTDR2_7_E12.g1_A021 Loblolly pine ro... 179 3e-044
gb|CF389494.1|CF389494 RTDR2_7_C05.g1_A021 Loblolly pine ro... 179 3e-044
gb|CF389595.1|CF389595 RTDR2_8_H06.g1_A021 Loblolly pine ro... 179 3e-044
gb|CF390155.1|CF390155 RTDR2_12_H04.g1_A021 Loblolly pine r... 179 3e-044
gb|CF390279.1|CF390279 RTDR2_18_G08.g1_A021 Loblolly pine r... 179 3e-044
gb|CF390312.1|CF390312 RTDR2_18_G10.g1_A021 Loblolly pine r... 179 3e-044
gb|CF390466.1|CF390466 RTDR2_19_D07.g1_A021 Loblolly pine r... 179 3e-044
gb|CF390690.1|CF390690 RTDR2_20_H06.g1_A021 Loblolly pine r... 179 3e-044
gb|CF390760.1|CF390760 RTDR2_17_A09.g1_A021 Loblolly pine r... 179 3e-044
gb|CF390766.1|CF390766 RTDR2_17_B11.g1_A021 Loblolly pine r... 179 3e-044
gb|CF390806.1|CF390806 RTDR2_17_D04.g1_A021 Loblolly pine r... 179 3e-044
gb|CF391060.1|CF391060 RTDR3_3_C11.g1_A022 Loblolly pine ro... 179 3e-044
gb|CF391248.1|CF391248 RTDR3_4_G11.g1_A022 Loblolly pine ro... 179 3e-044
gb|CF391295.1|CF391295 RTDR3_1_G09.b1_A022 Loblolly pine ro... 179 3e-044
gb|CF392064.1|CF392064 RTDR3_12_D11.g1_A022 Loblolly pine r... 179 3e-044
gb|CF392524.1|CF392524 RTDR3_6_C09.g1_A022 Loblolly pine ro... 179 3e-044
gb|CF392879.1|CF392879 RTDR3_19_H04.g1_A022 Loblolly pine r... 179 3e-044
gb|CF392894.1|CF392894 RTDR3_19_G10.g1_A022 Loblolly pine r... 179 3e-044
gb|CF393016.1|CF393016 RTDR3_18_G10.g1_A022 Loblolly pine r... 179 3e-044
gb|CF393034.1|CF393034 RTDR3_18_G05.g1_A022 Loblolly pine r... 179 3e-044
gb|CF393366.1|CF393366 RTDR3_20_G11.g1_A022 Loblolly pine r... 179 3e-044
gb|CF393545.1|CF393545 RTDR3_13_C02.g1_A022 Loblolly pine r... 179 3e-044
gb|CF393637.1|CF393637 RTDR3_15_C05.g1_A022 Loblolly pine r... 179 3e-044
gb|CF393995.1|CF393995 RTDS2_2_C05.g1_A021 Drought-stressed... 179 3e-044
gb|CF394012.1|CF394012 RTDS2_2_D01.g1_A021 Drought-stressed... 179 3e-044
gb|CF394431.1|CF394431 RTDS2_5_E12.g1_A021 Drought-stressed... 179 3e-044
gb|CF394673.1|CF394673 RTDS2_6_B09.g1_A021 Drought-stressed... 179 3e-044
gb|CF395279.1|CF395279 RTDS2_10_F11.g1_A021 Drought-stresse... 179 3e-044
gb|CF395591.1|CF395591 RTDS2_12_F10.g1_A021 Drought-stresse... 179 3e-044
gb|CF396228.1|CF396228 RTDS2_15_F10.g1_A021 Drought-stresse... 179 3e-044
gb|CF396369.1|CF396369 RTDS2_21_C04.g1_A021 Drought-stresse... 179 3e-044
gb|CF396434.1|CF396434 RTDS2_22_D11.b1_A021 Drought-stresse... 179 3e-044
gb|CF396534.1|CF396534 RTDS2_22_C08.g1_A021 Drought-stresse... 179 3e-044
gb|CF396707.1|CF396707 RTDS2_23_H11.g1_A021 Drought-stresse... 179 3e-044
gb|CF396787.1|CF396787 RTDS2_24_D10.b1_A021 Drought-stresse... 179 3e-044
gb|CF397019.1|CF397019 RTDS2_25_E08.g1_A021 Drought-stresse... 179 3e-044
gb|CF397441.1|CF397441 RTDS3_3_C12.g1_A022 Drought-stressed... 179 3e-044
gb|CF397447.1|CF397447 RTDS3_3_G06.g1_A022 Drought-stressed... 179 3e-044
gb|CF397613.1|CF397613 RTDS3_4_H12.g1_A022 Drought-stressed... 179 3e-044
gb|CF397783.1|CF397783 RTDS3_1_H11.g1_A022 Drought-stressed... 179 3e-044
gb|CF398112.1|CF398112 RTDS3_21_D03.b1_A022 Drought-stresse... 179 3e-044
gb|CF398288.1|CF398288 RTDS3_24_A11.g1_A022 Drought-stresse... 179 3e-044
gb|CF398299.1|CF398299 RTDS3_24_A12.g1_A022 Drought-stresse... 179 3e-044
gb|CF398545.1|CF398545 RTDS3_15_B08.g1_A022 Drought-stresse... 179 3e-044
gb|CF398588.1|CF398588 RTDS3_15_A11.g1_A022 Drought-stresse... 179 3e-044
gb|CF399118.1|CF399118 RTDS3_9_H10.g1_A022 Drought-stressed... 179 3e-044
gb|CF399765.1|CF399765 RTDS3_25_H11.g1_A022 Drought-stresse... 179 3e-044
gb|CF400464.1|CF400464 RTWW1_5_H09.g1_A015 Well-watered lob... 179 3e-044
gb|CF403026.1|CF403026 RTWW1_24_H05.g1_A015 Well-watered lo... 179 3e-044
gb|CF470586.1|CF470586 RTDS1_13_C05.g1_A015 Drought-stresse... 179 3e-044
gb|CF470751.1|CF470751 RTDS1_14_H11.g1_A015 Drought-stresse... 179 3e-044
gb|CF470777.1|CF470777 RTDS1_14_G11.g1_A015 Drought-stresse... 179 3e-044
gb|CF471799.1|CF471799 RTDS1_6_A07.g1_A015 Drought-stressed... 179 3e-044
gb|CF471906.1|CF471906 RTDS1_7_C03.g1_A015 Drought-stressed... 179 3e-044
gb|CF472127.1|CF472127 RTDS1_8_G05.g1_A015 Drought-stressed... 179 3e-044
gb|CF472258.1|CF472258 RTDS1_5_E03.g1_A015 Drought-stressed... 179 3e-044
gb|CF472746.1|CF472746 RTDS1_11_D08.g1_A015 Drought-stresse... 179 3e-044
gb|CF472771.1|CF472771 RTDS1_11_C08.g1_A015 Drought-stresse... 179 3e-044
gb|CF472910.1|CF472910 RTDS1_12_E07.g1_A015 Drought-stresse... 179 3e-044
gb|CF473109.1|CF473109 RTDS1_1_F12.g1_A015 Drought-stressed... 179 3e-044
gb|CF473282.1|CF473282 RTWW2_1_H11.g1_A021 Well-watered lob... 179 3e-044
gb|CF473396.1|CF473396 RTWW2_2_D11.g1_A021 Well-watered lob... 179 3e-044
gb|CF473407.1|CF473407 RTWW2_2_G04.g1_A021 Well-watered lob... 179 3e-044
gb|CF473936.1|CF473936 RTWW2_19_E02.g1_A021 Well-watered lo... 179 3e-044
gb|CF473941.1|CF473941 RTWW2_19_D04.g1_A021 Well-watered lo... 179 3e-044
gb|CF474270.1|CF474270 RTWW2_17_E12.g1_A021 Well-watered lo... 179 3e-044
gb|CF474430.1|CF474430 RTWW2_20_E03.g1_A021 Well-watered lo... 179 3e-044
gb|CF474557.1|CF474557 RTWW2_9_A04.g1_A021 Well-watered lob... 179 3e-044
gb|CF475065.1|CF475065 RTWW2_5_H12.g1_A021 Well-watered lob... 179 3e-044
gb|CF475158.1|CF475158 RTWW2_14_G03.b1_A021 Well-watered lo... 179 3e-044
gb|CF475224.1|CF475224 RTWW2_14_A07.g1_A021 Well-watered lo... 179 3e-044
gb|CF475370.1|CF475370 RTWW2_13_H05.g1_A021 Well-watered lo... 179 3e-044
gb|CF475703.1|CF475703 RTWW2_11_G03.g1_A021 Well-watered lo... 179 3e-044
gb|CF476005.1|CF476005 RTWW2_16_F08.g1_A021 Well-watered lo... 179 3e-044
gb|CF476120.1|CF476120 RTWW2_21_B10.b1_A021 Well-watered lo... 179 3e-044
gb|CF476175.1|CF476175 RTWW2_21_D08.g1_A021 Well-watered lo... 179 3e-044
gb|CF476468.1|CF476468 RTWW3_1_D05.g1_A022 Well-watered lob... 179 3e-044
gb|CF476623.1|CF476623 RTWW3_2_B02.g1_A022 Well-watered lob... 179 3e-044
gb|CF476763.1|CF476763 RTWW3_3_A07.g1_A022 Well-watered lob... 179 3e-044
gb|CF476959.1|CF476959 RTWW3_4_D01.g1_A022 Well-watered lob... 179 3e-044
gb|CF477112.1|CF477112 RTWW3_5_C03.g1_A022 Well-watered lob... 179 3e-044
gb|CF478493.1|CF478493 RTWW3_20_G07.g1_A022 Well-watered lo... 179 3e-044
gb|CF479053.1|CF479053 RTWW3_21_D04.g1_A022 Well-watered lo... 179 3e-044
gb|CF479558.1|CF479558 RTWW3_22_E10.g1_A022 Well-watered lo... 179 3e-044
gb|CF479610.1|CF479610 RTWW3_11_H02.b1_A022 Well-watered lo... 179 3e-044
gb|CF479701.1|CF479701 RTWW3_11_G03.g1_A022 Well-watered lo... 179 3e-044
gb|CF479858.1|CF479858 RTWW3_12_G06.g1_A022 Well-watered lo... 179 3e-044
gb|CF663308.1|CF663308 RTCNT1_2_C03.b1_A029 Root control Pi... 179 3e-044
gb|CF663984.1|CF663984 RTCNT1_6_A09.g1_A029 Root control Pi... 179 3e-044
gb|CF663990.1|CF663990 RTCNT1_6_B07.g1_A029 Root control Pi... 179 3e-044
gb|CF664147.1|CF664147 RTCNT1_7_E06.g1_A029 Root control Pi... 179 3e-044
gb|CF665032.1|CF665032 RTCNT1_13_A09.g1_A029 Root control P... 179 3e-044
gb|CF665340.1|CF665340 RTCNT1_15_H11.b1_A029 Root control P... 179 3e-044
gb|CF665369.1|CF665369 RTCNT1_15_C08.g1_A029 Root control P... 179 3e-044
gb|CF665698.1|CF665698 RTCNT1_17_G10.g1_A029 Root control P... 179 3e-044
gb|CF665911.1|CF665911 RTCNT1_19_H02.b1_A029 Root control P... 179 3e-044
gb|CF665994.1|CF665994 RTCNT1_20_B02.b1_A029 Root control P... 179 3e-044
gb|CF666091.1|CF666091 RTCNT1_20_D12.g1_A029 Root control P... 179 3e-044
gb|CF666341.1|CF666341 RTCNT1_22_C09.g1_A029 Root control P... 179 3e-044
gb|CF666359.1|CF666359 RTCNT1_22_E10.g1_A029 Root control P... 179 3e-044
gb|CF666520.1|CF666520 RTCNT1_23_H10.g1_A029 Root control P... 179 3e-044
gb|CF666706.1|CF666706 RTCNT1_25_B10.g1_A029 Root control P... 179 3e-044
gb|CF666986.1|CF666986 RTCNT1_27_B03.g1_A029 Root control P... 179 3e-044
gb|CF667041.1|CF667041 RTCNT1_27_G07.g1_A029 Root control P... 179 3e-044
gb|CF667514.1|CF667514 RTCNT1_30_G09.g1_A029 Root control P... 179 3e-044
gb|CF667578.1|CF667578 RTCNT1_31_F05.b1_A029 Root control P... 179 3e-044
gb|CF667954.1|CF667954 RTCNT1_33_B10.g1_A029 Root control P... 179 3e-044
gb|CF668009.1|CF668009 RTCNT1_33_G09.g1_A029 Root control P... 179 3e-044
gb|CF668022.1|CF668022 RTCNT1_33_H12.g1_A029 Root control P... 179 3e-044
gb|CF668687.1|CF668687 RTCNT1_38_C02.b1_A029 Root control P... 179 3e-044
gb|CF669564.1|CF669564 RTCNT1_44_B09.g1_A029 Root control P... 179 3e-044
gb|CF670322.1|CF670322 RTCNT1_49_B05.g1_A029 Root control P... 179 3e-044
gb|CF670618.1|CF670618 RTCNT1_51_A05.g1_A029 Root control P... 179 3e-044
gb|CF671680.1|CF671680 RTCNT1_58_C12.g1_A029 Root control P... 179 3e-044
gb|CF671718.1|CF671718 RTCNT1_58_G08.g1_A029 Root control P... 179 3e-044
gb|CF672207.1|CF672207 RTCNT1_62_C06.b1_A029 Root control P... 179 3e-044
gb|CF672273.1|CF672273 RTCNT1_62_B05.g1_A029 Root control P... 179 3e-044
gb|CF672343.1|CF672343 RTCNT1_62_H10.g1_A029 Root control P... 179 3e-044
gb|CF672561.1|CF672561 RTCNT1_64_A08.g1_A029 Root control P... 179 3e-044
gb|CF672566.1|CF672566 RTCNT1_64_B02.g1_A029 Root control P... 179 3e-044
gb|CF672897.1|CF672897 RTCNT1_74_E05.g1_A029 Root control P... 179 3e-044
gb|BX677509.1|BX677509 BX677509 RN Pinus pinaster cDNA clon... 179 3e-044
gb|BX678233.1|BX678233 BX678233 RN Pinus pinaster cDNA clon... 179 3e-044
gb|BX679925.1|BX679925 BX679925 RS Pinus pinaster cDNA clon... 179 3e-044
gb|BX680370.1|BX680370 BX680370 RS Pinus pinaster cDNA clon... 179 3e-044
gb|BX680501.1|BX680501 BX680501 RS Pinus pinaster cDNA clon... 179 3e-044
gb|BX681429.1|BX681429 BX681429 RS Pinus pinaster cDNA clon... 179 3e-044
gb|BX683037.1|BX683037 BX683037 Pinus pinaster differenciat... 179 3e-044
gb|BX784056.1|BX784056 BX784056 Pinus pinaster differenciat... 179 3e-044
gb|CR392384.1|CR392384 CR392384 RN Pinus pinaster cDNA clon... 179 3e-044
gb|CR393244.1|CR393244 CR393244 RN Pinus pinaster cDNA clon... 179 3e-044
gb|CR393384.1|CR393384 CR393384 RN Pinus pinaster cDNA clon... 179 3e-044
gb|CR394302.1|CR394302 CR394302 RN Pinus pinaster cDNA clon... 179 3e-044
gb|CN783796.1|CN783796 EST782487 Sequencing ESTs from loblo... 179 3e-044
gb|CO157694.1|CO157694 FLD1_1_A07.g1_A029 Root flooded Pinu... 179 3e-044
gb|CO157760.1|CO157760 FLD1_1_H10.g1_A029 Root flooded Pinu... 179 3e-044
gb|CO158985.1|CO158985 FLD1_10_C06.g1_A029 Root flooded Pin... 179 3e-044
gb|CO159138.1|CO159138 FLD1_11_D09.g1_A029 Root flooded Pin... 179 3e-044
gb|CO160364.1|CO160364 FLD1_20_B05.g1_A029 Root flooded Pin... 179 3e-044
gb|CO161745.1|CO161745 FLD1_30_H06.g1_A029 Root flooded Pin... 179 3e-044
gb|CO162143.1|CO162143 FLD1_33_A07.g1_A029 Root flooded Pin... 179 3e-044
gb|CO163146.1|CO163146 FLD1_39_F03.g1_A029 Root flooded Pin... 179 3e-044
gb|CO163272.1|CO163272 FLD1_40_C02.g1_A029 Root flooded Pin... 179 3e-044
gb|CO163349.1|CO163349 FLD1_41_B08.b1_A029 Root flooded Pin... 179 3e-044
gb|CO163435.1|CO163435 FLD1_41_D07.g1_A029 Root flooded Pin... 179 3e-044
gb|CO167180.1|CO167180 FLD1_67_H09.b1_A029 Root flooded Pin... 179 3e-044
gb|CO167425.1|CO167425 FLD1_68_H04.g1_A029 Root flooded Pin... 179 3e-044
gb|CO168015.1|CO168015 FLD1_72_E09.g1_A029 Root flooded Pin... 179 3e-044
gb|CO168778.1|CO168778 NDL1_2_B01.g1_A029 Needles control P... 179 3e-044
gb|CO169056.1|CO169056 NDL1_4_A01.g1_A029 Needles control P... 179 3e-044
gb|CO169533.1|CO169533 NDL1_7_E05.g1_A029 Needles control P... 179 3e-044
gb|CO169629.1|CO169629 NDL1_8_A06.g1_A029 Needles control P... 179 3e-044
gb|CO170103.1|CO170103 NDL1_11_E07.g1_A029 Needles control ... 179 3e-044
gb|CO170117.1|CO170117 NDL1_11_F11.g1_A029 Needles control ... 179 3e-044
gb|CO170785.1|CO170785 NDL1_16_H04.g1_A029 Needles control ... 179 3e-044
gb|CO171422.1|CO171422 NDL1_21_B10.g1_A029 Needles control ... 179 3e-044
gb|CO172411.1|CO172411 NDL1_29_C05.g1_A029 Needles control ... 179 3e-044
gb|CO172448.1|CO172448 NDL1_29_F12.g1_A029 Needles control ... 179 3e-044
gb|CO173218.1|CO173218 NDL1_34_F07.g1_A029 Needles control ... 179 3e-044
gb|CO173345.1|CO173345 NDL1_35_D01.g1_A029 Needles control ... 179 3e-044
gb|CO173397.1|CO173397 NDL1_36_A05.b1_A029 Needles control ... 179 3e-044
gb|CO173769.1|CO173769 NDL1_39_D07.b1_A029 Needles control ... 179 3e-044
gb|CO174274.1|CO174274 NDL1_42_H09.g1_A029 Needles control ... 179 3e-044
gb|CO174535.1|CO174535 NDL1_44_D02.g1_A029 Needles control ... 179 3e-044
gb|CO174817.1|CO174817 NDL1_46_B04.g1_A029 Needles control ... 179 3e-044
gb|CO174822.1|CO174822 NDL1_46_B10.g1_A029 Needles control ... 179 3e-044
gb|CO174889.1|CO174889 NDL1_46_H10.g1_A029 Needles control ... 179 3e-044
gb|CO174972.1|CO174972 NDL1_47_B07.g1_A029 Needles control ... 179 3e-044
gb|CO175140.1|CO175140 NDL1_48_E07.g1_A029 Needles control ... 179 3e-044
gb|CO175444.1|CO175444 NDL1_54_F09.g1_A029 Needles control ... 179 3e-044
gb|CO176350.1|CO176350 NDL1_61_A08.g1_A029 Needles control ... 179 3e-044
gb|CO197034.1|CO197034 GEO1_3_A07.g1_A029 Root gravitropism... 179 3e-044
gb|CO197335.1|CO197335 GEO1_5_C07.g1_A029 Root gravitropism... 179 3e-044
gb|CO197616.1|CO197616 GEO1_7_F04.g1_A029 Root gravitropism... 179 3e-044
gb|CO197689.1|CO197689 GEO1_8_G04.b1_A029 Root gravitropism... 179 3e-044
gb|CO198520.1|CO198520 GEO1_14_G08.b1_A029 Root gravitropis... 179 3e-044
gb|CO198772.1|CO198772 GEO1_16_H08.b1_A029 Root gravitropis... 179 3e-044
gb|CO198856.1|CO198856 GEO1_17_C07.b1_A029 Root gravitropis... 179 3e-044
gb|CO199229.1|CO199229 GEO1_19_E10.g1_A029 Root gravitropis... 179 3e-044
gb|CO199347.1|CO199347 GEO1_20_B08.g1_A029 Root gravitropis... 179 3e-044
gb|CO200319.1|CO200319 GEO2_6_F01.g1_A032 Root gravitropism... 179 3e-044
gb|CO200469.1|CO200469 GEO2_7_D09.g1_A032 Root gravitropism... 179 3e-044
gb|CO200574.1|CO200574 GEO2_8_F04.b1_A032 Root gravitropism... 179 3e-044
gb|CO200647.1|CO200647 GEO2_8_E03.g1_A032 Root gravitropism... 179 3e-044
gb|CO200790.1|CO200790 RTCNT2_1_C05.g1_A029 Root control 2 ... 179 3e-044
gb|CO411095.1|CO411095 EST841480 Sequencing ESTs from loblo... 179 3e-044
gb|CO411657.1|CO411657 EST842042 Sequencing ESTs from loblo... 179 3e-044
gb|CO411675.1|CO411675 EST842060 Sequencing ESTs from loblo... 179 3e-044
gb|CO412696.1|CO412696 EST843081 Sequencing ESTs from loblo... 179 3e-044
gb|CO361216.1|CO361216 NDL2_3_B05.g1_A029 Needles control 2... 179 3e-044
gb|CO361674.1|CO361674 NDL2_6_G09.b1_A029 Needles control 2... 179 3e-044
gb|CO362019.1|CO362019 NDL2_8_D01.g1_A029 Needles control 2... 179 3e-044
gb|CO362210.1|CO362210 RTK1_2_C06.b1_A029 Roots minus potas... 179 3e-044
gb|CO363912.1|CO363912 RTK1_12_C03.g1_A029 Roots minus pota... 179 3e-044
gb|CO364399.1|CO364399 RTK1_15_B03.g1_A029 Roots minus pota... 179 3e-044
gb|CO365634.1|CO365634 RTK1_18_F06.b1_A029 Roots minus pota... 179 3e-044
gb|CO365864.1|CO365864 RTK1_19_E04.g1_A029 Roots minus pota... 179 3e-044
gb|CO366786.1|CO366786 RTK1_30_C05.b1_A029 Roots minus pota... 179 3e-044
gb|CO366989.1|CO366989 RTK1_31_A12.g1_A029 Roots minus pota... 179 3e-044
gb|CO367841.1|CO367841 RTK1_37_B05.b1_A029 Roots minus pota... 179 3e-044
gb|CO369077.1|CO369077 RTK1_44_F11.g1_A029 Roots minus pota... 179 3e-044
gb|CO369635.1|CO369635 RTK1_48_A10.g1_A029 Roots minus pota... 179 3e-044
gb|CO370120.1|CO370120 RTK1_65_D05.g1_A029 Roots minus pota... 179 3e-044
gb|CO370454.1|CO370454 RTK1_68_B01.b1_A029 Roots minus pota... 179 3e-044
gb|CV031412.1|CV031412 RTNACL1_1_A05.g1_A029 Roots plus add... 179 3e-044
gb|CV031731.1|CV031731 RTNACL1_3_H03.b1_A029 Roots plus add... 179 3e-044
gb|CV032064.1|CV032064 RTNACL1_5_C02.g2_A029 Roots plus add... 179 3e-044
gb|CV032177.1|CV032177 RTNACL1_6_H10.b1_A029 Roots plus add... 179 3e-044
gb|CV032196.1|CV032196 RTNACL1_6_C03.g2_A029 Roots plus add... 179 3e-044
gb|CV032344.1|CV032344 RTNACL1_7_B04.g2_A029 Roots plus add... 179 3e-044
gb|CV032438.1|CV032438 RTNACL1_8_D08.b1_A029 Roots plus add... 179 3e-044
gb|CV032997.1|CV032997 RTNACL1_19_C11.g1_A029 Roots plus ad... 179 3e-044
gb|CV033353.1|CV033353 RTNACL1_34_B04.b1_A029 Roots plus ad... 179 3e-044
gb|CV033757.1|CV033757 RTNACL1_36_A09.g1_A029 Roots plus ad... 179 3e-044
gb|CV033925.1|CV033925 RTNACL1_37_A10.g1_A029 Roots plus ad... 179 3e-044
gb|CV034644.1|CV034644 RTNACL1_10_D02.g1_A029 Roots plus ad... 179 3e-044
gb|CV034940.1|CV034940 RTNACL1_12_D01.g1_A029 Roots plus ad... 179 3e-044
gb|CV035254.1|CV035254 RTNACL1_14_G04.g1_A029 Roots plus ad... 179 3e-044
gb|CV035686.1|CV035686 RTNACL1_41_F01.g1_A029 Roots plus ad... 179 3e-044
gb|CV035947.1|CV035947 RTNACL1_43_C09.g1_A029 Roots plus ad... 179 3e-044
gb|CV136991.1|CV136991 EST848200 Sequencing ESTs from loblo... 179 3e-044
gb|CV139230.1|CV139230 EST850439 Sequencing ESTs from loblo... 179 3e-044
gb|CV143711.1|CV143711 EST854920 Sequencing ESTs from loblo... 179 3e-044
gb|CV143713.1|CV143713 EST854922 Sequencing ESTs from loblo... 179 3e-044
gb|CV144326.1|CV144326 EST855535 Sequencing ESTs from loblo... 179 3e-044
gb|CV146261.1|CV146261 EST857470 Sequencing ESTs from loblo... 179 3e-044
gb|CV147615.1|CV147615 EST858824 Sequencing ESTs from loblo... 179 3e-044
gb|CX645434.1|CX645434 COLD1_2_F08.g1_A029 Root cold Pinus ... 179 3e-044
gb|CX645736.1|CX645736 COLD1_5_B06.b1_A029 Root cold Pinus ... 179 3e-044
gb|CX646273.1|CX646273 COLD1_8_H03.b1_A029 Root cold Pinus ... 179 3e-044
gb|CX646442.1|CX646442 COLD1_9_H07.b1_A029 Root cold Pinus ... 179 3e-044
gb|CX646451.1|CX646451 COLD1_9_A06.g1_A029 Root cold Pinus ... 179 3e-044
gb|CX646457.1|CX646457 COLD1_9_B01.g1_A029 Root cold Pinus ... 179 3e-044
gb|CX647442.1|CX647442 COLD1_16_H11.b1_A029 Root cold Pinus... 179 3e-044
gb|CX648287.1|CX648287 COLD1_27_E08.g1_A029 Root cold Pinus... 179 3e-044
gb|CX648299.1|CX648299 COLD1_27_F08.g1_A029 Root cold Pinus... 179 3e-044
gb|CX648417.1|CX648417 COLD1_28_B11.g1_A029 Root cold Pinus... 179 3e-044
gb|CX648741.1|CX648741 COLD1_30_D03.g1_A029 Root cold Pinus... 179 3e-044
gb|CX649132.1|CX649132 COLD1_33_E05.b1_A029 Root cold Pinus... 179 3e-044
gb|CX649156.1|CX649156 COLD1_33_G11.b1_A029 Root cold Pinus... 179 3e-044
gb|CX649234.1|CX649234 COLD1_33_H06.g1_A029 Root cold Pinus... 179 3e-044
gb|CX649733.1|CX649733 COLD1_41_D08.b1_A029 Root cold Pinus... 179 3e-044
gb|CX650116.1|CX650116 COLD1_43_D02.g1_A029 Root cold Pinus... 179 3e-044
gb|CX650462.1|CX650462 COLD1_45_G10.g1_A029 Root cold Pinus... 179 3e-044
gb|CX650564.1|CX650564 COLD1_46_C04.g1_A029 Root cold Pinus... 179 3e-044
gb|CX650612.1|CX650612 COLD1_46_H01.g1_A029 Root cold Pinus... 179 3e-044
gb|CX650745.1|CX650745 COLD1_47_G05.g1_A029 Root cold Pinus... 179 3e-044
gb|CX712400.1|CX712400 RTPQ1_2_G01.b2_A032 Roots treated wi... 179 3e-044
gb|CX712795.1|CX712795 RTPQ1_4_G09.g2_A032 Roots treated wi... 179 3e-044
gb|CX712999.1|CX712999 RTPQ1_6_G06.b1_A032 Roots treated wi... 179 3e-044
gb|CX713042.1|CX713042 RTPQ1_6_D04.g1_A032 Roots treated wi... 179 3e-044
gb|CX713674.1|CX713674 RTPQ1_11_G06.g1_A032 Roots treated w... 179 3e-044
gb|CX714603.1|CX714603 RTPQ1_23_G01.g1_A032 Roots treated w... 179 3e-044
gb|CX714677.1|CX714677 RTPQ1_24_E04.g1_A032 Roots treated w... 179 3e-044
gb|CX715150.1|CX715150 RTPQ1_31_H09.g1_A032 Roots treated w... 179 3e-044
gb|CX715479.1|CX715479 RTPQ1_34_A09.g1_A032 Roots treated w... 179 3e-044
gb|CX716075.1|CX716075 RTPQ1_40_H03.b1_A032 Roots treated w... 179 3e-044
gb|DN447102.1|DN447102 EST942901 Sequencing ESTs from loblo... 179 3e-044
gb|DN447333.1|DN447333 EST943132 Sequencing ESTs from loblo... 179 3e-044
gb|DN447384.1|DN447384 EST943183 Sequencing ESTs from loblo... 179 3e-044
gb|DN449934.1|DN449934 EST945733 Sequencing ESTs from loblo... 179 3e-044
gb|DN450320.1|DN450320 EST946119 Sequencing ESTs from loblo... 179 3e-044
gb|DN451138.1|DN451138 EST946937 Sequencing ESTs from loblo... 179 3e-044
gb|DN451740.1|DN451740 EST947539 Sequencing ESTs from loblo... 179 3e-044
gb|DN452209.1|DN452209 EST948008 Sequencing ESTs from loblo... 179 3e-044
gb|DN453160.1|DN453160 EST948959 Sequencing ESTs from loblo... 179 3e-044
gb|DN459982.1|DN459982 EST955781 Sequencing ESTs from loblo... 179 3e-044
gb|DN460132.1|DN460132 EST955931 Sequencing ESTs from loblo... 179 3e-044
gb|DN460619.1|DN460619 EST956418 Sequencing ESTs from loblo... 179 3e-044
gb|DN462657.1|DN462657 EST958456 Sequencing ESTs from loblo... 179 3e-044
gb|DN613328.1|DN613328 EST966378 Subtracted pine embryo lib... 179 3e-044
gb|DN626704.1|DN626704 EST977520 Subtracted pine embryo lib... 179 3e-044
gb|DN628654.1|DN628654 EST979470 Subtracted pine embryo lib... 179 3e-044
gb|DN629222.1|DN629222 EST980038 Subtracted pine embryo lib... 179 3e-044
gb|DN630570.1|DN630570 EST981386 Subtracted pine embryo lib... 179 3e-044
gb|DN630753.1|DN630753 EST981569 Subtracted pine embryo lib... 179 3e-044
gb|DN631603.1|DN631603 EST982419 Subtracted pine embryo lib... 179 3e-044
gb|DN632313.1|DN632313 EST983129 Subtracted pine embryo lib... 179 3e-044
gb|DN634081.1|DN634081 EST984897 Subtracted pine embryo lib... 179 3e-044
gb|DN634252.1|DN634252 EST985068 Subtracted pine embryo lib... 179 3e-044
gb|DR011241.1|DR011241 HEAT1_4_B03.g1_A029 Root at 37 C for... 179 3e-044
gb|DR011770.1|DR011770 HEAT1_7_G01.g1_A029 Root at 37 C for... 179 3e-044
gb|DR012518.1|DR012518 HEAT1_13_H03.b1_A029 Root at 37 C fo... 179 3e-044
gb|DR012529.1|DR012529 HEAT1_13_A04.g1_A029 Root at 37 C fo... 179 3e-044
gb|DR013442.1|DR013442 HEAT1_19_H02.b1_A029 Root at 37 C fo... 179 3e-044
gb|DR013625.1|DR013625 HEAT1_20_B02.g1_A029 Root at 37 C fo... 179 3e-044
gb|DR013853.1|DR013853 HEAT1_22_A04.b1_A029 Root at 37 C fo... 179 3e-044
gb|DR014323.1|DR014323 HEAT1_24_F12.g1_A029 Root at 37 C fo... 179 3e-044
gb|DR014438.1|DR014438 HEAT1_49_B04.g1_A029 Root at 37 C fo... 179 3e-044
gb|DR015379.1|DR015379 STRS1_3_D09.b1_A034 Shoot tip pitch ... 179 3e-044
gb|DR015840.1|DR015840 STRS1_6_A07.b1_A034 Shoot tip pitch ... 179 3e-044
gb|DR016501.1|DR016501 STRS1_10_B06.g1_A034 Shoot tip pitch... 179 3e-044
gb|DR016760.1|DR016760 STRS1_12_B05.b1_A034 Shoot tip pitch... 179 3e-044
gb|DR016878.1|DR016878 STRS1_12_E12.g1_A034 Shoot tip pitch... 179 3e-044
gb|DR017096.1|DR017096 STRS1_14_B12.b1_A034 Shoot tip pitch... 179 3e-044
gb|DR017404.1|DR017404 STRS1_16_C07.b1_A034 Shoot tip pitch... 179 3e-044
gb|DR019946.1|DR019946 STRS1_33_C09.g1_A034 Shoot tip pitch... 179 3e-044
gb|DR020085.1|DR020085 STRS1_34_B12.g1_A034 Shoot tip pitch... 179 3e-044
gb|DR021308.1|DR021308 STRS1_43_F04.g1_A034 Shoot tip pitch... 179 3e-044
gb|DR022690.1|DR022690 STRS1_52_G03.g1_A034 Shoot tip pitch... 179 3e-044
gb|DR022801.1|DR022801 STRS1_53_C09.g1_A034 Shoot tip pitch... 179 3e-044
gb|DR022964.1|DR022964 STRS1_54_D08.g1_A034 Shoot tip pitch... 179 3e-044
gb|DR023092.1|DR023092 STRS1_55_A07.g1_A034 Shoot tip pitch... 179 3e-044
gb|DR023559.1|DR023559 STRS1_58_B04.g1_A034 Shoot tip pitch... 179 3e-044
gb|DR023644.1|DR023644 STRS1_59_C09.b1_A034 Shoot tip pitch... 179 3e-044
>gb|BX251219.1|BX251219 BX251219 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP046H05, mRNA sequence
Length = 646
Score = 303 bits (655), Expect = 2e-081
Identities = 127/131 (96%), Positives = 129/131 (98%)
Frame = -2 / +1
Query: 748 SNKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 569
++KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct: 10 ASKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 189
Query: 568 DYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 389
DYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH
Sbjct: 190 DYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 369
Query: 388 SNQLRAKKKIK 356
SNQLR KKKIK
Sbjct: 370 SNQLRPKKKIK 402
Score = 204 bits (440), Expect = 7e-052
Identities = 89/131 (67%), Positives = 94/131 (71%)
Frame = +3 / -3
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 404 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 225
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA P
Sbjct: 224 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTSKVMVLP 45
Query: 714 VSVFTKICILL 746
V VFTKICILL
Sbjct: 44 VRVFTKICILL 12
Score = 122 bits (262), Expect = 2e-027
Identities = 54/113 (47%), Positives = 73/113 (64%)
Frame = -1 / +3
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 63 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 242
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 243 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQ 401
Score = 108 bits (230), Expect = 6e-023
Identities = 58/142 (40%), Positives = 80/142 (56%)
Frame = +2 / -2
Query: 317 TLSMKLTRSSTSVLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQ 496
TL + +++ +LD LL PQ D RVQ+ IAF+A+HLVLVVL + Q
Sbjct: 441 TLEI*NLNAASHLLDFLLWPQLVTMPTLLFPAVDCSRVQTSIAFSANHLVLVVLPGQCHQ 262
Query: 497 RGLNDSTAEPKHEVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXX 676
R L ++ +P+H+V+ L L+V++R+ A+I QLL K Q LLV RDPF
Sbjct: 261 RRLYNTPTKPQHKVQG*LFLNVVIRQSASIFQLLARKYQTLLVGRDPFFVLDFGLHIVDC 82
Query: 677 XAALDLEGDGLPCQRLHEDLHL 742
AA + GL Q L+EDLHL
Sbjct: 81 IAAFNF*SYGLARQGLYEDLHL 16
>gb|BQ655396.1|BQ655396 NXRV093_G12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV093_G12 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 722
Score = 303 bits (655), Expect = 2e-081
Identities = 127/131 (96%), Positives = 129/131 (98%)
Frame = -2 / +1
Query: 748 SNKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 569
++KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct: 73 ASKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 252
Query: 568 DYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 389
DYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH
Sbjct: 253 DYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 432
Query: 388 SNQLRAKKKIK 356
SNQLR KKKIK
Sbjct: 433 SNQLRPKKKIK 465
Score = 204 bits (440), Expect = 7e-052
Identities = 89/131 (67%), Positives = 94/131 (71%)
Frame = +3 / -1
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 467 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 288
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA P
Sbjct: 287 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTSKVMVLP 108
Query: 714 VSVFTKICILL 746
V VFTKICILL
Sbjct: 107 VRVFTKICILL 75
Score = 122 bits (262), Expect = 2e-027
Identities = 54/113 (47%), Positives = 73/113 (64%)
Frame = -1 / +3
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 126 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 305
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 306 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQ 464
Score = 109 bits (232), Expect = 3e-023
Identities = 57/130 (43%), Positives = 75/130 (57%)
Frame = +2 / -3
Query: 353 VLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDSTAEPKH 532
+LD LL PQ D RVQ+ IAF+A+HLVLVVL + QR L ++ +P+H
Sbjct: 468 LLDFLLWPQLVTMPTLLFPAVDCSRVQTSIAFSANHLVLVVLPGQCHQRRLYNTPTKPQH 289
Query: 533 EVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDLEGDGLP 712
+V+ L L+V++R+ A+I QLL K Q LLV RDPF AA + G GL
Sbjct: 288 KVQG*LFLNVVIRQSASIFQLLARKYQTLLVGRDPFFVLDFGLHIVDCIAAFNF*GYGLA 109
Query: 713 CQRLHEDLHL 742
Q L+EDLHL
Sbjct: 108 RQGLYEDLHL 79
>gb|CF471465.1|CF471465 RTDS1_3_D12.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_3_D12_A015 5', mRNA sequence
Length = 596
Score = 303 bits (655), Expect = 2e-081
Identities = 127/131 (96%), Positives = 129/131 (98%)
Frame = -2 / +3
Query: 748 SNKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 569
++KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct: 21 ASKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 200
Query: 568 DYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 389
DYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH
Sbjct: 201 DYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 380
Query: 388 SNQLRAKKKIK 356
SNQLR KKKIK
Sbjct: 381 SNQLRPKKKIK 413
Score = 204 bits (440), Expect = 7e-052
Identities = 89/131 (67%), Positives = 94/131 (71%)
Frame = +3 / -2
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 415 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 236
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA P
Sbjct: 235 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTSKVMVLP 56
Query: 714 VSVFTKICILL 746
V VFTKICILL
Sbjct: 55 VRVFTKICILL 23
Score = 122 bits (262), Expect = 2e-027
Identities = 54/113 (47%), Positives = 73/113 (64%)
Frame = -1 / +2
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 74 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 253
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 254 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQ 412
Score = 109 bits (232), Expect = 3e-023
Identities = 57/130 (43%), Positives = 75/130 (57%)
Frame = +2 / -1
Query: 353 VLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDSTAEPKH 532
+LD LL PQ D RVQ+ IAF+A+HLVLVVL + QR L ++ +P+H
Sbjct: 416 LLDFLLWPQLVTMPTLLFPAVDCSRVQTSIAFSANHLVLVVLPGQCHQRRLYNTPTKPQH 237
Query: 533 EVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDLEGDGLP 712
+V+ L L+V++R+ A+I QLL K Q LLV RDPF AA + G GL
Sbjct: 236 KVQG*LFLNVVIRQSASIFQLLARKYQTLLVGRDPFFVLDFGLHIVDCIAAFNF*GYGLA 57
Query: 713 CQRLHEDLHL 742
Q L+EDLHL
Sbjct: 56 RQGLYEDLHL 27
>gb|DR017432.1|DR017432 STRS1_16_F08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_16_F08_A034 3', mRNA sequence
Length = 745
Score = 303 bits (655), Expect = 2e-081
Identities = 127/131 (96%), Positives = 129/131 (98%)
Frame = -2 / +2
Query: 748 SNKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 569
++KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct: 11 ASKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 190
Query: 568 DYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 389
DYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH
Sbjct: 191 DYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 370
Query: 388 SNQLRAKKKIK 356
SNQLR KKKIK
Sbjct: 371 SNQLRPKKKIK 403
Score = 209 bits (451), Expect = 2e-053
Identities = 92/137 (67%), Positives = 97/137 (70%)
Frame = +3 / -2
Query: 336 LGAAPQFLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIP 515
L AA +LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IP
Sbjct: 423 LNAASHYLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIP 244
Query: 516 PRSLSTRWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXX 695
PRSLSTR VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA
Sbjct: 243 PRSLSTRCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTS 64
Query: 696 XXXXFPVSVFTKICILL 746
PV VFTKICILL
Sbjct: 63 KVMVLPVRVFTKICILL 13
Score = 123 bits (264), Expect = 1e-027
Identities = 55/117 (47%), Positives = 75/117 (64%)
Frame = -1 / +1
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 64 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 243
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQELRC 345
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q + C
Sbjct: 244 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQL*EKEVWA**PAAAKEENQVM*C 414
Score = 111 bits (237), Expect = 7e-024
Identities = 58/136 (42%), Positives = 78/136 (57%)
Frame = +2 / -1
Query: 335 TRSSTSVLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDS 514
T+ ++LD LL PQ D RVQ+ IAF+A+HLVLVVL + QR L ++
Sbjct: 424 TQCGITLLDFLLWPQLVTMPTLLFPTVDCSRVQTSIAFSANHLVLVVLPGQCHQRRLYNT 245
Query: 515 TAEPKHEVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDL 694
+P+H+V+ L L+V++R+ A+I QLL K Q LLV RDPF AA +
Sbjct: 244 PTKPQHKVQG*LFLNVVIRQSASIFQLLARKYQTLLVGRDPFFVLDFGLHIVDCIAAFNF 65
Query: 695 EGDGLPCQRLHEDLHL 742
G GL Q L+EDLHL
Sbjct: 64 *GYGLARQGLYEDLHL 17
>gb|BX248887.1|BX248887 BX248887 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP002C05 similar to UBIQUITIN, mRNA sequence
Length = 671
Score = 302 bits (654), Expect = 2e-081
Identities = 127/130 (97%), Positives = 128/130 (98%)
Frame = -2 / +2
Query: 745 NKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 566
+KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 8 DKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 187
Query: 565 YNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 386
YNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS
Sbjct: 188 YNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 367
Query: 385 NQLRAKKKIK 356
NQLR KKKIK
Sbjct: 368 NQLRPKKKIK 397
Score = 199 bits (429), Expect = 2e-050
Identities = 90/130 (69%), Positives = 94/130 (72%)
Frame = +3 / -3
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A +EGS+IPPRSL T
Sbjct: 399 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIKEGSIIPPRSLKT 220
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLS ILA P
Sbjct: 219 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLS*ILAFTLSIVSLLSTSRVMVLP 40
Query: 714 VSVFTKICIL 743
V VFTKICIL
Sbjct: 39 VRVFTKICIL 10
Score = 103 bits (219), Expect = 2e-021
Identities = 51/132 (38%), Positives = 72/132 (54%)
Frame = +2 / -2
Query: 350 SVLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDSTAEPK 529
++ D LL PQ P +Q+ I +A+HLVLVVL + QR N+ + +P+
Sbjct: 403 ALFDFLLRPQLITMSALLFPAVYCPGMQTGITLSANHLVLVVLPCQSHQRRFNNPSTKPQ 224
Query: 530 HEVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDLEGDGL 709
++V RRL L+++V K I QL ++Q LLVR +PF AALDL+G G
Sbjct: 223 NKV*RRLFLNIVVSKSTPIFQLFSSENQTLLVRWNPFLVLNLGLHIIDRIAALDLKGYGF 44
Query: 710 PCQRLHEDLHLV 745
+ HEDLHLV
Sbjct: 43 ASKGFHEDLHLV 8
Score = 101 bits (216), Expect = 5e-021
Identities = 52/114 (45%), Positives = 68/114 (59%)
Frame = -1 / +1
Query: 698 PRGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*AP 519
P GREQR+ R C+GQD GQGRD PAA D + AG W + C L + + VYA P A
Sbjct: 55 P*GREQRYDR*CEGQDSGQGRDST*PAAFDFRWKTAGRWAYSC*LQYSERVYATPCFEAS 234
Query: 518 RWNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
++* G +VQPGQDDL ++LC A G +L ++EV + AE EE+Q
Sbjct: 235 WRDY*TFFDGFGKEVQPGQDDLQKVLCPFASQGSKLQEKEVRT**SAEA*EENQ 396
>gb|BX251714.1|BX251714 BX251714 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP054C10 similar to UBIQUITIN, mRNA sequence
Length = 649
Score = 302 bits (654), Expect = 2e-081
Identities = 127/130 (97%), Positives = 128/130 (98%)
Frame = -2 / +1
Query: 745 NKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 566
+KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 4 DKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 183
Query: 565 YNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 386
YNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS
Sbjct: 184 YNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 363
Query: 385 NQLRAKKKIK 356
NQLR KKKIK
Sbjct: 364 NQLRPKKKIK 393
Score = 199 bits (430), Expect = 2e-050
Identities = 90/130 (69%), Positives = 95/130 (73%)
Frame = +3 / -3
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A +EGS+IPPRSL+T
Sbjct: 395 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIKEGSIIPPRSLNT 216
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLS ILA P
Sbjct: 215 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLS*ILAFTLSIVSLLSTSRVMVLP 36
Query: 714 VSVFTKICIL 743
V VFTKICIL
Sbjct: 35 VRVFTKICIL 6
Score = 107 bits (229), Expect = 9e-023
Identities = 53/134 (39%), Positives = 73/134 (54%)
Frame = +2 / -2
Query: 344 STSVLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDSTAE 523
S ++ D LL PQ P +Q+ I +A+HLVLVVL + QR N+ + +
Sbjct: 405 SDALFDFLLRPQLITMSALLFPAVYCPGMQTGITLSANHLVLVVLPCQSHQRRFNNPSTK 226
Query: 524 PKHEVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDLEGD 703
P+H+V RRL L+++V K I QL ++Q LLVR +PF AALDL+G
Sbjct: 225 PQHKV*RRLFLNIVVSKSTPIFQLFSSENQTLLVRWNPFLVLNLGLHIIDRIAALDLKGY 46
Query: 704 GLPCQRLHEDLHLV 745
G + HEDLHLV
Sbjct: 45 GFASKGFHEDLHLV 4
Score = 102 bits (218), Expect = 3e-021
Identities = 52/114 (45%), Positives = 68/114 (59%)
Frame = -1 / +3
Query: 698 PRGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*AP 519
P GREQR+ R C+GQD GQGRD PAA D + AG W + C L + + VYA P A
Sbjct: 51 P*GREQRYDR*CEGQDSGQGRDST*PAAFDFRWKTAGRWAYSC*LQYSERVYATPCVEAS 230
Query: 518 RWNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
++* G +VQPGQDDL ++LC A G +L ++EV + AE EE+Q
Sbjct: 231 WRDY*TFFDGFGKEVQPGQDDLQKVLCPFASQGSKLQEKEVRT**SAEA*EENQ 392
>gb|BQ290635.1|BQ290635 NXRV047_G02_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV047_G02 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 664
Score = 302 bits (654), Expect = 2e-081
Identities = 127/130 (97%), Positives = 128/130 (98%)
Frame = -2 / +1
Query: 745 NKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 566
+KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 7 DKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 186
Query: 565 YNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 386
YNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS
Sbjct: 187 YNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 366
Query: 385 NQLRAKKKIK 356
NQLR KKKIK
Sbjct: 367 NQLRPKKKIK 396
Score = 208 bits (449), Expect = 4e-053
Identities = 92/130 (70%), Positives = 95/130 (73%)
Frame = +3 / -3
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A REGS+IPPRSL T
Sbjct: 398 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIREGSIIPPRSLKT 219
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLSWILA P
Sbjct: 218 RCSVDSFCIL*SARVRPSSSCFPAKIKRCWSGGIPSLSWILAFTLSIVSLLSTSRVMVLP 39
Query: 714 VSVFTKICIL 743
V VFTKICIL
Sbjct: 38 VRVFTKICIL 9
Score = 104 bits (222), Expect = 8e-022
Identities = 53/114 (46%), Positives = 69/114 (60%)
Frame = -1 / +3
Query: 698 PRGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*AP 519
P GREQR+ R C+GQDPGQ RD PAA D + AG W + C L + + VYA P A
Sbjct: 54 P*GREQRYDR*CEGQDPGQRRDST*PAAFDFRWKTAGRWAYSC*LQYTERVYATPCFEAS 233
Query: 518 RWNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
++* S G +VQPGQDDL ++LC A G +L ++EV + AE EE+Q
Sbjct: 234 WRDY*TFSDGFGKEVQPGQDDLQKVLCPFASQGSKLQEKEVRT**SAEA*EENQ 395
Score = 101 bits (216), Expect = 5e-021
Identities = 52/134 (38%), Positives = 72/134 (53%)
Frame = +2 / -2
Query: 344 STSVLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDSTAE 523
S ++ D LL PQ P +Q+ I +A+HLVLVVL + QR N+ + +
Sbjct: 408 SDALFDFLLRPQLITMSALLFPAVYCPGMQTGITLSANHLVLVVLPCQSHQRRFNNPSTK 229
Query: 524 PKHEVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDLEGD 703
P+++V RRL L ++V K I QL ++Q LLVR +PF AALDL+G
Sbjct: 228 PQNKV*RRLFLYIVVSKSTPIFQLFSSENQTLLVRWNPFFVLDLGLHIIDRIAALDLKGY 49
Query: 704 GLPCQRLHEDLHLV 745
G + HEDLHLV
Sbjct: 48 GFAGKGFHEDLHLV 7
>gb|BX680677.1|BX680677 BX680677 RS Pinus pinaster cDNA clone RS47B05, mRNA sequence
Length = 642
Score = 302 bits (654), Expect = 2e-081
Identities = 127/130 (97%), Positives = 128/130 (98%)
Frame = -2 / +3
Query: 745 NKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 566
+KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 6 DKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 185
Query: 565 YNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 386
YNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS
Sbjct: 186 YNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 365
Query: 385 NQLRAKKKIK 356
NQLR KKKIK
Sbjct: 366 NQLRPKKKIK 395
Score = 199 bits (429), Expect = 2e-050
Identities = 90/130 (69%), Positives = 94/130 (72%)
Frame = +3 / -3
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A +EGS+IPPRSL T
Sbjct: 397 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIKEGSIIPPRSLKT 218
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLS ILA P
Sbjct: 217 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLS*ILAFTLSIVSLLSTSRVMVLP 38
Query: 714 VSVFTKICIL 743
V VFTKICIL
Sbjct: 37 VRVFTKICIL 8
Score = 104 bits (222), Expect = 8e-022
Identities = 52/134 (38%), Positives = 73/134 (54%)
Frame = +2 / -2
Query: 344 STSVLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDSTAE 523
S ++ D LL PQ P +Q+ I +A+HLVLVVL + QR N+ + +
Sbjct: 407 SDALFDFLLRPQLITMSALLFPAVYCPGMQTGITLSANHLVLVVLPCQSHQRRFNNPSTK 228
Query: 524 PKHEVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDLEGD 703
P+++V RRL L+++V K I QL ++Q LLVR +PF AALDL+G
Sbjct: 227 PQNKV*RRLFLNIVVSKSTPIFQLFSSENQTLLVRWNPFLVLNLGLHIIDRIAALDLKGY 48
Query: 704 GLPCQRLHEDLHLV 745
G + HEDLHLV
Sbjct: 47 GFASKGFHEDLHLV 6
Score = 101 bits (216), Expect = 5e-021
Identities = 52/114 (45%), Positives = 68/114 (59%)
Frame = -1 / +2
Query: 698 PRGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*AP 519
P GREQR+ R C+GQD GQGRD PAA D + AG W + C L + + VYA P A
Sbjct: 53 P*GREQRYDR*CEGQDSGQGRDST*PAAFDFRWKTAGRWAYSC*LQYSERVYATPCFEAS 232
Query: 518 RWNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
++* G +VQPGQDDL ++LC A G +L ++EV + AE EE+Q
Sbjct: 233 WRDY*TFFDGFGKEVQPGQDDLQKVLCPFASQGSKLQEKEVRT**SAEA*EENQ 394
>gb|CX646651.1|CX646651 COLD1_10_D10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_10_D10_A029 5', mRNA sequence
Length = 778
Score = 302 bits (654), Expect = 2e-081
Identities = 127/130 (97%), Positives = 128/130 (98%)
Frame = -2 / -2
Query: 745 NKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 566
+KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 774 DKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 595
Query: 565 YNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 386
YNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS
Sbjct: 594 YNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 415
Query: 385 NQLRAKKKIK 356
NQLR KKKIK
Sbjct: 414 NQLRPKKKIK 385
Score = 206 bits (444), Expect = 2e-052
Identities = 91/130 (70%), Positives = 95/130 (73%)
Frame = +3 / +2
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A +EGS+IPPRSL T
Sbjct: 383 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIKEGSIIPPRSLKT 562
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLSWILA P
Sbjct: 563 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLSWILAFTLSIVSLLSTSRVMVLP 742
Query: 714 VSVFTKICIL 743
V VFTKICIL
Sbjct: 743 VRVFTKICIL 772
Score = 102 bits (218), Expect = 3e-021
Identities = 51/134 (38%), Positives = 73/134 (54%)
Frame = +2 / +1
Query: 344 STSVLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDSTAE 523
S ++ D LL PQ P +Q+ I +A+HLVLVVL + QR N+ + +
Sbjct: 373 SDALFDFLLRPQLITMSALLFPAVYCPGMQTGITLSANHLVLVVLPCQSHQRRFNNPSTK 552
Query: 524 PKHEVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDLEGD 703
+++V+RRL L+++V K I QL ++Q LLVR +PF AALDL+G
Sbjct: 553 SQNKVQRRLFLNIVVSKSTPIFQLFSSENQTLLVRWNPFFVLDLGLHIIDRIAALDLKGY 732
Query: 704 GLPCQRLHEDLHLV 745
G + HEDLHLV
Sbjct: 733 GFAGKGFHEDLHLV 774
>gb|AI812314.1|AI812314 10G11 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 571
Score = 302 bits (653), Expect = 3e-081
Identities = 127/129 (98%), Positives = 127/129 (98%)
Frame = -2 / +3
Query: 742 KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 563
KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY
Sbjct: 3 KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 182
Query: 562 NIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN 383
NIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN
Sbjct: 183 NIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN 362
Query: 382 QLRAKKKIK 356
QLR KKKIK
Sbjct: 363 QLRPKKKIK 389
Score = 202 bits (436), Expect = 2e-051
Identities = 88/130 (67%), Positives = 93/130 (71%)
Frame = +3 / -1
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 391 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 212
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA P
Sbjct: 211 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTSKVMVLP 32
Query: 714 VSVFTKICIL 743
V VFTKICIL
Sbjct: 31 VRVFTKICIL 2
Score = 122 bits (262), Expect = 2e-027
Identities = 54/113 (47%), Positives = 73/113 (64%)
Frame = -1 / +2
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 50 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 229
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 230 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQ 388
Score = 109 bits (232), Expect = 3e-023
Identities = 57/130 (43%), Positives = 75/130 (57%)
Frame = +2 / -3
Query: 353 VLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDSTAEPKH 532
+LD LL PQ D RVQ+ IAF+A+HLVLVVL + QR L ++ +P+H
Sbjct: 392 LLDFLLWPQLVTMPTLLFPAVDCSRVQTSIAFSANHLVLVVLPGQCHQRRLYNTPTKPQH 213
Query: 533 EVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDLEGDGLP 712
+V+ L L+V++R+ A+I QLL K Q LLV RDPF AA + G GL
Sbjct: 212 KVQG*LFLNVVIRQSASIFQLLARKYQTLLVGRDPFFVLDFGLHIVDCIAAFNF*GYGLA 33
Query: 713 CQRLHEDLHL 742
Q L+EDLHL
Sbjct: 32 RQGLYEDLHL 3
>gb|BG040034.1|BG040034 NXSI_105_F01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_105_F01 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 532
Score = 302 bits (653), Expect = 3e-081
Identities = 127/129 (98%), Positives = 127/129 (98%)
Frame = -2 / +2
Query: 742 KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 563
KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY
Sbjct: 2 KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 181
Query: 562 NIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN 383
NIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN
Sbjct: 182 NIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN 361
Query: 382 QLRAKKKIK 356
QLR KKKIK
Sbjct: 362 QLRPKKKIK 388
Score = 207 bits (447), Expect = 7e-053
Identities = 91/136 (66%), Positives = 96/136 (70%)
Frame = +3 / -2
Query: 336 LGAAPQFLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIP 515
L AA +LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IP
Sbjct: 408 LNAASHYLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIP 229
Query: 516 PRSLSTRWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXX 695
PRSLSTR VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA
Sbjct: 228 PRSLSTRCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTS 49
Query: 696 XXXXFPVSVFTKICIL 743
PV VFTKICIL
Sbjct: 48 KVMVLPVRVFTKICIL 1
Score = 125 bits (267), Expect = 5e-028
Identities = 55/117 (47%), Positives = 75/117 (64%)
Frame = -1 / +1
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 49 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 228
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQELRC 345
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q + C
Sbjct: 229 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQVM*C 399
Score = 111 bits (237), Expect = 7e-024
Identities = 58/136 (42%), Positives = 78/136 (57%)
Frame = +2 / -1
Query: 335 TRSSTSVLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDS 514
T+ ++LD LL PQ D RVQ+ IAF+A+HLVLVVL + QR L ++
Sbjct: 409 TQCGITLLDFLLWPQLVTMPTLLFPAVDCSRVQTSIAFSANHLVLVVLPGQCHQRRLYNT 230
Query: 515 TAEPKHEVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDL 694
+P+H+V+ L L+V++R+ A+I QLL K Q LLV RDPF AA +
Sbjct: 229 PTKPQHKVQG*LFLNVVIRQSASIFQLLARKYQTLLVGRDPFFVLDFGLHIVDCIAAFNF 50
Query: 695 EGDGLPCQRLHEDLHL 742
G GL Q L+EDLHL
Sbjct: 49 *GYGLARQGLYEDLHL 2
>gb|CX646570.1|CX646570 COLD1_10_D10.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_10_D10_A029 3', mRNA sequence
Length = 802
Score = 300 bits (649), Expect = 1e-080
Identities = 126/129 (97%), Positives = 127/129 (98%)
Frame = -2 / -2
Query: 742 KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 563
+MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY
Sbjct: 792 QMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 613
Query: 562 NIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN 383
NIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN
Sbjct: 612 NIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN 433
Query: 382 QLRAKKKIK 356
QLR KKKIK
Sbjct: 432 QLRPKKKIK 406
Score = 204 bits (440), Expect = 7e-052
Identities = 90/129 (69%), Positives = 94/129 (72%)
Frame = +3 / +2
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A +EGS+IPPRSL T
Sbjct: 404 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIKEGSIIPPRSLKT 583
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLSWILA P
Sbjct: 584 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLSWILAFTLSIVSLLSTSRVMVLP 763
Query: 714 VSVFTKICI 740
V VFTKICI
Sbjct: 764 VRVFTKICI 790
>gb|DR099679.1|DR099679 STRR1_57_G07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_57_G07_A033 3', mRNA sequence
Length = 756
Score = 300 bits (649), Expect = 1e-080
Identities = 126/129 (97%), Positives = 127/129 (98%)
Frame = -2 / -3
Query: 742 KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 563
+MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY
Sbjct: 745 QMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 566
Query: 562 NIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN 383
NIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN
Sbjct: 565 NIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN 386
Query: 382 QLRAKKKIK 356
QLR KKKIK
Sbjct: 385 QLRPKKKIK 359
Score = 204 bits (440), Expect = 7e-052
Identities = 90/129 (69%), Positives = 94/129 (72%)
Frame = +3 / +3
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A +EGS+IPPRSL T
Sbjct: 357 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIKEGSIIPPRSLKT 536
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLSWILA P
Sbjct: 537 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLSWILAFTLSIVSLLSTSRVMVLP 716
Query: 714 VSVFTKICI 740
V VFTKICI
Sbjct: 717 VRVFTKICI 743
>gb|BF777504.1|BF777504 NXSI_069_D02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_069_D02 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 432
Score = 298 bits (646), Expect = 3e-080
Identities = 125/131 (95%), Positives = 127/131 (96%)
Frame = -2 / +3
Query: 748 SNKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 569
++KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct: 21 ASKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 200
Query: 568 DYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 389
DYNIQKESTLHLVLRLRGGIIEPSL AL RKYNQDKMICRKCYARLHPRAVNCRKKKCGH
Sbjct: 201 DYNIQKESTLHLVLRLRGGIIEPSLMALXRKYNQDKMICRKCYARLHPRAVNCRKKKCGH 380
Query: 388 SNQLRAKKKIK 356
SNQL KKKIK
Sbjct: 381 SNQLXXKKKIK 413
Score = 201 bits (434), Expect = 5e-051
Identities = 88/130 (67%), Positives = 92/130 (70%)
Frame = +3 / -3
Query: 357 LIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLSTR 536
LIFF SWLL PHFF QLTA GC RA*H QIILSWLY +A +EGS+IPPRSLSTR
Sbjct: 412 LIFFFXXSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLXNAIKEGSIIPPRSLSTR 233
Query: 537 WSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFPV 716
VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA PV
Sbjct: 232 CKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTSKVMVLPV 53
Query: 717 SVFTKICILL 746
VFTKICILL
Sbjct: 52 RVFTKICILL 23
Score = 122 bits (261), Expect = 3e-027
Identities = 54/113 (47%), Positives = 73/113 (64%)
Frame = -1 / +2
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 74 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 253
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 254 GYYRAFFDGIGXEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAXKEENQ 412
Score = 105 bits (223), Expect = 6e-022
Identities = 56/129 (43%), Positives = 73/129 (56%)
Frame = +2 / -2
Query: 356 LDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDSTAEPKHE 535
LD LL Q D RVQ+ IAF+A+HLVLVVL + QR L ++ +P+H+
Sbjct: 413 LDFLLXXQLVTMPTLLFPAVDCSRVQTSIAFSANHLVLVVLPXQCHQRRLYNTPTKPQHK 234
Query: 536 VERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDLEGDGLPC 715
V+ L L+V++R+ A+I QLL K Q LLV RDPF AA + G GL
Sbjct: 233 VQG*LFLNVVIRQSASIFQLLARKYQTLLVGRDPFFVLDFGLHIVDCIAAFNF*GYGLAR 54
Query: 716 QRLHEDLHL 742
Q L+EDLHL
Sbjct: 53 QGLYEDLHL 27
>gb|BQ701703.1|BQ701703 NXSI_118_F02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_118_F02 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 549
Score = 297 bits (644), Expect = 5e-080
Identities = 125/131 (95%), Positives = 127/131 (96%)
Frame = -2 / +1
Query: 748 SNKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 569
++KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct: 7 ASKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 186
Query: 568 DYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 389
DYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH
Sbjct: 187 DYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 366
Query: 388 SNQLRAKKKIK 356
SNQL KKIK
Sbjct: 367 SNQLXXXKKIK 399
Score = 204 bits (440), Expect = 7e-052
Identities = 89/131 (67%), Positives = 94/131 (71%)
Frame = +3 / -2
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 401 YLIFFXXXSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 222
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA P
Sbjct: 221 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTSKVMVLP 42
Query: 714 VSVFTKICILL 746
V VFTKICILL
Sbjct: 41 VRVFTKICILL 9
Score = 121 bits (259), Expect = 6e-027
Identities = 54/113 (47%), Positives = 72/113 (63%)
Frame = -1 / +3
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 60 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 239
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA EE+Q
Sbjct: 240 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAXXEENQ 398
Score = 103 bits (219), Expect = 2e-021
Identities = 55/130 (42%), Positives = 73/130 (56%)
Frame = +2 / -1
Query: 353 VLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDSTAEPKH 532
+LD L Q D RVQ+ IAF+A+HLVLVVL + QR L ++ +P+H
Sbjct: 402 LLDFLXXXQLVTMPTLLFPAVDCSRVQTSIAFSANHLVLVVLPGQCHQRRLYNTPTKPQH 223
Query: 533 EVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDLEGDGLP 712
+V+ L L+V++R+ A+I QLL K Q LLV RDPF AA + G GL
Sbjct: 222 KVQG*LFLNVVIRQSASIFQLLARKYQTLLVGRDPFFVLDFGLHIVDCIAAFNF*GYGLA 43
Query: 713 CQRLHEDLHL 742
Q L+EDLHL
Sbjct: 42 RQGLYEDLHL 13
>gb|BG040107.1|BG040107 NXSI_106_E05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_106_E05 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 549
Score = 297 bits (643), Expect = 7e-080
Identities = 125/127 (98%), Positives = 125/127 (98%)
Frame = -2 / +1
Query: 736 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 557
QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI
Sbjct: 1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 180
Query: 556 QKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL 377
QKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL
Sbjct: 181 QKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL 360
Query: 376 RAKKKIK 356
R KKKIK
Sbjct: 361 RPKKKIK 381
Score = 198 bits (427), Expect = 4e-050
Identities = 88/127 (69%), Positives = 92/127 (72%)
Frame = +3 / -2
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A +EGS+IPPRSL T
Sbjct: 383 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIKEGSIIPPRSLKT 204
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLSWILA P
Sbjct: 203 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLSWILAFTLSIVSLLSTSRVMVLP 24
Query: 714 VSVFTKI 734
V VFTKI
Sbjct: 23 VRVFTKI 3
>gb|CF393312.1|CF393312 RTDR3_20_F05.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_20_F05_A022 5', mRNA
sequence
Length = 727
Score = 297 bits (643), Expect = 7e-080
Identities = 125/127 (98%), Positives = 125/127 (98%)
Frame = -2 / +3
Query: 736 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 557
QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI
Sbjct: 3 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 182
Query: 556 QKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL 377
QKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL
Sbjct: 183 QKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL 362
Query: 376 RAKKKIK 356
R KKKIK
Sbjct: 363 RPKKKIK 383
Score = 199 bits (428), Expect = 3e-050
Identities = 86/128 (67%), Positives = 91/128 (71%)
Frame = +3 / -1
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 385 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 206
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA P
Sbjct: 205 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTSKVMVLP 26
Query: 714 VSVFTKIC 737
V VFTKIC
Sbjct: 25 VRVFTKIC 2
Score = 122 bits (262), Expect = 2e-027
Identities = 54/113 (47%), Positives = 73/113 (64%)
Frame = -1 / +2
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 44 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 223
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 224 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQ 382
Score = 103 bits (220), Expect = 2e-021
Identities = 55/128 (42%), Positives = 73/128 (57%)
Frame = +2 / -3
Query: 353 VLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDSTAEPKH 532
+LD LL PQ D RVQ+ IAF+A+HLVLVVL + QR L ++ +P+H
Sbjct: 386 LLDFLLWPQLVTMPTLLFPAVDCSRVQTSIAFSANHLVLVVLPGQCHQRRLYNTPTKPQH 207
Query: 533 EVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDLEGDGLP 712
+V+ L L+V++R+ A+I QLL K Q LLV RDPF AA + G GL
Sbjct: 206 KVQG*LFLNVVIRQSASIFQLLARKYQTLLVGRDPFFVLDFGLHIVDCIAAFNF*GYGLA 27
Query: 713 CQRLHEDL 736
Q L+EDL
Sbjct: 26 RQGLYEDL 3
>gb|DR165451.1|DR165451 RTPHOS1_5_E03.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_5_E03_A029 3', mRNA sequence
Length = 742
Score = 297 bits (643), Expect = 7e-080
Identities = 125/127 (98%), Positives = 125/127 (98%)
Frame = -2 / +1
Query: 736 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 557
QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI
Sbjct: 1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 180
Query: 556 QKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL 377
QKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL
Sbjct: 181 QKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL 360
Query: 376 RAKKKIK 356
R KKKIK
Sbjct: 361 RPKKKIK 381
Score = 194 bits (419), Expect = 5e-049
Identities = 85/127 (66%), Positives = 90/127 (70%)
Frame = +3 / -3
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 383 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 204
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA P
Sbjct: 203 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTSKVMVLP 24
Query: 714 VSVFTKI 734
V VFTKI
Sbjct: 23 VRVFTKI 3
Score = 122 bits (262), Expect = 2e-027
Identities = 54/113 (47%), Positives = 73/113 (64%)
Frame = -1 / +3
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 42 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 221
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 222 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQ 380
Score = 105 bits (224), Expect = 4e-022
Identities = 57/140 (40%), Positives = 79/140 (56%)
Frame = +2 / -2
Query: 317 TLSMKLTRSSTSVLDLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQ 496
TL + +++ +LD LL PQ D RVQ+ IAF+A+HLVLVVL + Q
Sbjct: 420 TLEI*NLNAASHLLDFLLWPQLVTMPTLLFPAVDCSRVQTSIAFSANHLVLVVLPGQCHQ 241
Query: 497 RGLNDSTAEPKHEVERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXX 676
R L ++ +P+H+V+ L L+V++R+ A+I QLL K Q LLV RDPF
Sbjct: 240 RRLYNTPTKPQHKVQG*LFLNVVIRQSASIFQLLARKYQTLLVGRDPFFVLDFGLHIVDC 61
Query: 677 XAALDLEGDGLPCQRLHEDL 736
AA + G GL Q L+EDL
Sbjct: 60 IAAFNF*GYGLARQGLYEDL 1
>gb|BX681409.1|BX681409 BX681409 RS Pinus pinaster cDNA clone RS58G02, mRNA sequence
Length = 608
Score = 295 bits (638), Expect = 3e-079
Identities = 124/126 (98%), Positives = 124/126 (98%)
Frame = -2 / +1
Query: 733 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 554
IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ
Sbjct: 1 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 180
Query: 553 KESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR 374
KESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR
Sbjct: 181 KESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR 360
Query: 373 AKKKIK 356
KKKIK
Sbjct: 361 PKKKIK 378
Score = 189 bits (408), Expect = 2e-047
Identities = 86/126 (68%), Positives = 90/126 (71%)
Frame = +3 / -1
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A +EGS+IPPRSL T
Sbjct: 380 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIKEGSIIPPRSLKT 201
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLS ILA P
Sbjct: 200 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLS*ILAFTLSIVSLLSTSRVMVLP 21
Query: 714 VSVFTK 731
V VFTK
Sbjct: 20 VRVFTK 3
Score = 101 bits (216), Expect = 5e-021
Identities = 52/114 (45%), Positives = 68/114 (59%)
Frame = -1 / +3
Query: 698 PRGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*AP 519
P GREQR+ R C+GQD GQGRD PAA D + AG W + C L + + VYA P A
Sbjct: 36 P*GREQRYDR*CEGQDSGQGRDST*PAAFDFRWKTAGRWAYSC*LQYSERVYATPCFEAS 215
Query: 518 RWNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
++* G +VQPGQDDL ++LC A G +L ++EV + AE EE+Q
Sbjct: 216 WRDY*TFFDGFGKEVQPGQDDLQKVLCPFASQGSKLQEKEVRT**SAEA*EENQ 377
>gb|BG040210.1|BG040210 NXSI_109_G05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_109_G05 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 548
Score = 294 bits (637), Expect = 5e-079
Identities = 124/127 (97%), Positives = 124/127 (97%)
Frame = -2 / +1
Query: 736 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 557
QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI
Sbjct: 1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 180
Query: 556 QKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL 377
QKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL
Sbjct: 181 QKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL 360
Query: 376 RAKKKIK 356
KKKIK
Sbjct: 361 XPKKKIK 381
Score = 199 bits (430), Expect = 2e-050
Identities = 89/127 (70%), Positives = 92/127 (72%)
Frame = +3 / -1
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A REGS+IPPRSL T
Sbjct: 383 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIREGSIIPPRSLKT 204
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLSWILA P
Sbjct: 203 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLSWILAFTLSIVSLLSTSRVMVLP 24
Query: 714 VSVFTKI 734
V VFTKI
Sbjct: 23 VRVFTKI 3
Score = 104 bits (221), Expect = 1e-021
Identities = 53/114 (46%), Positives = 69/114 (60%)
Frame = -1 / +3
Query: 698 PRGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*AP 519
P GREQR+ R C+GQDPGQ RD PAA D + AG W + C L + + VYA P A
Sbjct: 39 P*GREQRYDR*CEGQDPGQRRDST*PAAFDFRWKTAGRWAYSC*LQYSERVYATPCFEAS 218
Query: 518 RWNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
++* S G +VQPGQDDL ++LC A G +L ++EV + AE EE+Q
Sbjct: 219 WRDY*TFSDGFGKEVQPGQDDLQKVLCPFASQGSKLQEKEVRT**SAEX*EENQ 380
>gb|BM493700.1|BM493700 NXLV_069_D07_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_069_D07 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 551
Score = 294 bits (636), Expect = 6e-079
Identities = 124/130 (95%), Positives = 125/130 (96%)
Frame = -2 / +2
Query: 745 NKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 566
+KM IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 38 DKM*IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 217
Query: 565 YNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 386
YNIQKESTLHLVLRLRGGIIEP L ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS
Sbjct: 218 YNIQKESTLHLVLRLRGGIIEPXLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 397
Query: 385 NQLRAKKKIK 356
NQL KKKIK
Sbjct: 398 NQLXXKKKIK 427
Score = 194 bits (419), Expect = 5e-049
Identities = 88/130 (67%), Positives = 91/130 (70%)
Frame = +3 / -3
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL S LL PHFF Q TALGC RA*H QIILSWLY A A GS+IPPRSL T
Sbjct: 429 YLIFFLXXS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIXXGSIIPPRSLKT 250
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLSWILA P
Sbjct: 249 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLSWILAFTLSIVSLLSTSRVMVLP 70
Query: 714 VSVFTKICIL 743
V VFTKI IL
Sbjct: 69 VRVFTKIYIL 40
>gb|BQ655437.1|BQ655437 NXRV094_E08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV094_E08 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 425
Score = 292 bits (633), Expect = 2e-078
Identities = 123/130 (94%), Positives = 125/130 (96%)
Frame = -2 / +2
Query: 748 SNKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 569
++KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct: 11 ASKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 190
Query: 568 DYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 389
DYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNC KKKCGH
Sbjct: 191 DYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCXKKKCGH 370
Query: 388 SNQLRAKKKI 359
SN LR K KI
Sbjct: 371 SNXLRXKXKI 400
Score = 190 bits (410), Expect = 9e-048
Identities = 85/130 (65%), Positives = 90/130 (69%)
Frame = +3 / -3
Query: 357 LIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLSTR 536
+IF LL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLSTR
Sbjct: 402 MIFXXXRXXLLCPHFFXXQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLSTR 223
Query: 537 WSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFPV 716
VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA PV
Sbjct: 222 CKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTSKVMVLPV 43
Query: 717 SVFTKICILL 746
VFTKICILL
Sbjct: 42 RVFTKICILL 13
Score = 113 bits (241), Expect = 2e-024
Identities = 51/112 (45%), Positives = 68/112 (60%)
Frame = -1 / +1
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 64 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 243
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEED 360
+ A G +VQP QDDL +MLC++AP QL +EVW+ P E+
Sbjct: 244 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLXXKEVWA**PXAAXXEN 399
Score = 105 bits (224), Expect = 4e-022
Identities = 57/128 (44%), Positives = 74/128 (57%)
Frame = +2 / -2
Query: 359 DLLLGPQXXXXXXXXXXXXDSPRVQSCIAFAADHLVLVVLASERLQRGLNDSTAEPKHEV 538
D L PQ D RVQ+ IAF+A+HLVLVVL + QR L ++ +P+H+V
Sbjct: 400 DFXLXPQXVTMPTLLFXAVDCSRVQTSIAFSANHLVLVVLPGQCHQRRLYNTPTKPQHKV 221
Query: 539 ERRLLLDVIVRKGAAILQLLPGKDQPLLVRRDPFXXXXXXXXXXXXXAALDLEGDGLPCQ 718
+ L L+V++R+ A+I QLL K Q LLV RDPF AA + G GL Q
Sbjct: 220 QG*LFLNVVIRQSASIFQLLARKYQTLLVGRDPFFVLDFGLHIVDCIAAFNF*GYGLARQ 41
Query: 719 RLHEDLHL 742
L+EDLHL
Sbjct: 40 GLYEDLHL 17
>gb|AW010252.1|AW010252 ST03H04 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST03H04, mRNA sequence
Length = 726
Score = 289 bits (626), Expect = 2e-077
Identities = 122/128 (95%), Positives = 124/128 (96%)
Frame = -2 / +3
Query: 745 NKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 566
+KMQIFVKTLTGKTITLE ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 42 DKMQIFVKTLTGKTITLEGESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 221
Query: 565 YNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHS 386
YNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHP AVNCRKKKCGHS
Sbjct: 222 YNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPXAVNCRKKKCGHS 401
Query: 385 NQLRAKKK 362
QLRAKK+
Sbjct: 402 XQLRAKKE 425
Score = 194 bits (419), Expect = 5e-049
Identities = 87/126 (69%), Positives = 90/126 (71%)
Frame = +3 / -3
Query: 366 FLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLSTRWSV 545
FLALS L PHFF Q TA GC RA*H QIILSWLY A A +EGS+IPPRSL TR SV
Sbjct: 421 FLALS*XLXPHFFFLQFTAXGCKRA*HFLQIILSWLYFLAKAIKEGSIIPPRSLKTRCSV 242
Query: 546 DSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFPVSVF 725
DSF +L*SARVRPSSSCFPAKI RCWSGGIPSLSWILA PV VF
Sbjct: 241 DSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLSWILAFTLSIVSLLSPSRVMVLPVRVF 62
Query: 726 TKICIL 743
TKICIL
Sbjct: 61 TKICIL 44
>gb|BF186098.1|BF186098 NXCI_132_F08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_132_F08 5' similar to Arabidopsis
thaliana sequence At3g52590 ubiquitin / ribosomal
protein CEP52 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 525
Score = 288 bits (623), Expect = 4e-077
Identities = 121/125 (96%), Positives = 121/125 (96%)
Frame = -2 / +2
Query: 730 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 551
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 2 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 181
Query: 550 ESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRA 371
ESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL
Sbjct: 182 ESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLXX 361
Query: 370 KKKIK 356
KK IK
Sbjct: 362 KKXIK 376
Score = 190 bits (409), Expect = 1e-047
Identities = 85/126 (67%), Positives = 88/126 (69%)
Frame = +3 / -1
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+L FL S LL PHFF Q TALGC RA*H QIILSWLY A A REGS+IPPRSL T
Sbjct: 378 YLXXFLXXS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIREGSIIPPRSLKT 199
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLSWILA P
Sbjct: 198 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLSWILAFTLSIVSLLSTSRVMVLP 19
Query: 714 VSVFTK 731
V VFTK
Sbjct: 18 VRVFTK 1
>gb|DR017515.1|DR017515 STRS1_16_F08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_16_F08_A034 5', mRNA sequence
Length = 709
Score = 286 bits (619), Expect = 1e-076
Identities = 120/122 (98%), Positives = 120/122 (98%)
Frame = -2 / +2
Query: 721 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 542
TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
Sbjct: 2 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 181
Query: 541 LHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAKKK 362
LHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR KKK
Sbjct: 182 LHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 361
Query: 361 IK 356
IK
Sbjct: 362 IK 367
Score = 190 bits (410), Expect = 9e-048
Identities = 84/129 (65%), Positives = 89/129 (68%)
Frame = +3 / -2
Query: 336 LGAAPQFLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIP 515
L AA +LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IP
Sbjct: 387 LNAASHYLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIP 208
Query: 516 PRSLSTRWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXX 695
PRSLSTR VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA
Sbjct: 207 PRSLSTRCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTS 28
Query: 696 XXXXFPVSV 722
PV V
Sbjct: 27 KVMVLPVRV 1
Score = 123 bits (264), Expect = 1e-027
Identities = 55/117 (47%), Positives = 75/117 (64%)
Frame = -1 / +1
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 28 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 207
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQELRC 345
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q + C
Sbjct: 208 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQL*EKEVWA**PAAAKEENQVM*C 378
>gb|DR092418.1|DR092418 STRR1_1_F10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_F10_A033 3', mRNA sequence
Length = 563
Score = 284 bits (614), Expect = 7e-076
Identities = 119/121 (98%), Positives = 119/121 (98%)
Frame = -2 / +1
Query: 718 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 539
LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL
Sbjct: 1 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 180
Query: 538 HLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAKKKI 359
HLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR KKKI
Sbjct: 181 HLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKI 360
Query: 358 K 356
K
Sbjct: 361 K 363
Score = 184 bits (396), Expect = 8e-046
Identities = 80/121 (66%), Positives = 85/121 (70%)
Frame = +3 / -1
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 365 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 186
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA P
Sbjct: 185 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTSKVMVLP 6
Query: 714 V 716
V
Sbjct: 5 V 3
Score = 122 bits (262), Expect = 2e-027
Identities = 54/113 (47%), Positives = 73/113 (64%)
Frame = -1 / +3
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 24 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 203
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 204 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQ 362
>gb|AW289988.1|AW289988 NXNV009F02F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV009F02 5', mRNA sequence
Length = 476
Score = 282 bits (610), Expect = 2e-075
Identities = 118/120 (98%), Positives = 118/120 (98%)
Frame = -2 / +3
Query: 715 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 536
TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH
Sbjct: 3 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 182
Query: 535 LVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
LVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR KKKIK
Sbjct: 183 LVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 362
Score = 184 bits (396), Expect = 8e-046
Identities = 80/121 (66%), Positives = 85/121 (70%)
Frame = +3 / -2
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 364 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 185
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA P
Sbjct: 184 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTSKVMVLP 5
Query: 714 V 716
V
Sbjct: 4 V 2
Score = 122 bits (262), Expect = 2e-027
Identities = 54/113 (47%), Positives = 73/113 (64%)
Frame = -1 / +2
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 23 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 202
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 203 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQ 361
>gb|CD026680.1|CD026680 NXNV009F02 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV009F02 5' similar to Arabidopsis thaliana sequence
At3g52590 ubiquitin / ribosomal protein CEP52 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 476
Score = 282 bits (610), Expect = 2e-075
Identities = 118/120 (98%), Positives = 118/120 (98%)
Frame = -2 / +3
Query: 715 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 536
TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH
Sbjct: 3 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 182
Query: 535 LVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
LVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR KKKIK
Sbjct: 183 LVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 362
Score = 184 bits (396), Expect = 8e-046
Identities = 80/121 (66%), Positives = 85/121 (70%)
Frame = +3 / -2
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 364 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 185
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFP 713
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA P
Sbjct: 184 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSTSKVMVLP 5
Query: 714 V 716
V
Sbjct: 4 V 2
Score = 122 bits (262), Expect = 2e-027
Identities = 54/113 (47%), Positives = 73/113 (64%)
Frame = -1 / +2
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 23 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 202
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 203 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQ 361
>gb|DR165532.1|DR165532 RTPHOS1_5_E03.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_5_E03_A029 5', mRNA sequence
Length = 743
Score = 275 bits (595), Expect = 3e-073
Identities = 115/119 (96%), Positives = 116/119 (97%)
Frame = -2 / +2
Query: 712 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 533
G+ ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL
Sbjct: 2 GQDITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 181
Query: 532 VLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
VLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR KKKIK
Sbjct: 182 VLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 358
Score = 183 bits (395), Expect = 1e-045
Identities = 78/102 (76%), Positives = 83/102 (81%)
Frame = +3 / -3
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 360 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 181
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILA 659
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA
Sbjct: 180 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILA 55
Score = 122 bits (262), Expect = 2e-027
Identities = 54/113 (47%), Positives = 73/113 (64%)
Frame = -1 / +1
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
R +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 19 RS*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 198
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+ A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 199 GYYRAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQ 357
>gb|CO161902.1|CO161902 FLD1_31_H08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_31_H08_A029 5', mRNA sequence
Length = 629
Score = 271 bits (587), Expect = 4e-072
Identities = 114/118 (96%), Positives = 115/118 (97%)
Frame = -2 / +3
Query: 709 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 530
+TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG TLADYNIQKESTLHLV
Sbjct: 12 QTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGCTLADYNIQKESTLHLV 191
Query: 529 LRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
LRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR KKKIK
Sbjct: 192 LRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 365
Score = 187 bits (403), Expect(2) = 5e-054
Identities = 81/102 (79%), Positives = 84/102 (82%)
Frame = +3 / -2
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A REGS+IPPRSL T
Sbjct: 367 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIREGSIIPPRSLKT 188
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILA 659
R SVDSF +L*SARV PSSSCFPAKI RCWSGGIPSLSWILA
Sbjct: 187 RCSVDSFCIL*SARVHPSSSCFPAKIKRCWSGGIPSLSWILA 62
Score = 104 bits (221), Expect = 1e-021
Identities = 53/114 (46%), Positives = 69/114 (60%)
Frame = -1 / +2
Query: 698 PRGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*AP 519
P GREQR+ R C+GQDPGQ RD PAA D + AG W + C L + + VYA P A
Sbjct: 23 P*GREQRYDR*CEGQDPGQRRDST*PAAFDFRWKTAGRWVYSC*LQYTERVYATPCFEAS 202
Query: 518 RWNH*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
++* S G +VQPGQDDL ++LC A G +L ++EV + AE EE+Q
Sbjct: 203 WRDY*TFSDGFGKEVQPGQDDLQKVLCPFASQGSKLQEKEVRT**SAEA*EENQ 364
Score = 44.6 bits (91), Expect(2) = 5e-054
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +1 / -3
Query: 637 LPCPGSWP*HCRWCRCSRPRG*W 705
L CPGSWP H R RCSRP+G W
Sbjct: 84 LLCPGSWPSHYRSYRCSRPQGLW 16
>gb|BX678785.1|BX678785 BX678785 RS Pinus pinaster cDNA clone RS15A11, mRNA sequence
Length = 493
Score = 269 bits (582), Expect = 2e-071
Identities = 115/129 (89%), Positives = 117/129 (90%)
Frame = -2 / +1
Query: 742 KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 563
K++ K L K L VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY
Sbjct: 1 KIRFS*KPLLAKP*PLSVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 180
Query: 562 NIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN 383
NIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN
Sbjct: 181 NIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN 360
Query: 382 QLRAKKKIK 356
QLR KKKIK
Sbjct: 361 QLRPKKKIK 387
Score = 180 bits (388), Expect(2) = 2e-049
Identities = 80/102 (78%), Positives = 84/102 (82%)
Frame = +3 / -3
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A +EGS+IPPRSL T
Sbjct: 389 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIKEGSIIPPRSLKT 210
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILA 659
R SVDSF +L*SARVRPSSSCFPAKI RCWSGGIPSLS ILA
Sbjct: 209 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGIPSLS*ILA 84
Score = 97.7 bits (207), Expect(2) = 1e-024
Identities = 50/111 (45%), Positives = 66/111 (59%)
Frame = -1 / +3
Query: 689 REQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APRWN 510
REQR+ R C+GQD GQGRD PAA D + AG W + C L + + VYA P A +
Sbjct: 54 REQRYDR*CEGQDSGQGRDST*PAAFDFRWKTAGRWAYSC*LQYSERVYATPCFEASWRD 233
Query: 509 H*ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+* G +VQPGQDDL ++LC A G +L ++EV + AE EE+Q
Sbjct: 234 Y*TFFDGFGKEVQPGQDDLQKVLCPFASQGSKLQEKEVRT**SAEA*EENQ 386
Score = 35.9 bits (72), Expect(2) = 2e-049
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +1 / -1
Query: 637 LPCPGSWP*HCRWCRCSR 690
LPCP SWP H R RCSR
Sbjct: 106 LPCPESWPSHYRSYRCSR 53
Score = 35.9 bits (72), Expect(2) = 1e-024
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2 / +3
Query: 736 QIFVKTLTGKTITLE 692
QIFVKTLTGKTITLE
Sbjct: 6 QIFVKTLTGKTITLE 50
>gb|BF169524.1|BF169524 NXCI_123_E10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_123_E10 5' similar to Arabidopsis
thaliana sequence At3g52590 ubiquitin / ribosomal
protein CEP52 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 356
Score = 260 bits (563), Expect = 7e-069
Identities = 110/118 (93%), Positives = 110/118 (93%)
Frame = -2 / +1
Query: 736 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 557
QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI
Sbjct: 1 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 180
Query: 556 QKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSN 383
QKESTLHLVL RGGI EPSL ALA KYNQDKMICRKCYARLH AVNC KKKCGHSN
Sbjct: 181 QKESTLHLVLXXRGGIXEPSLMALAXKYNQDKMICRKCYARLHXXAVNCXKKKCGHSN 354
Score = 177 bits (382), Expect = 7e-044
Identities = 79/117 (67%), Positives = 81/117 (69%)
Frame = +3 / -1
Query: 384 LL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLSTRWSVDSFWML 563
LL PHFF Q TA C RA*H QIILSWLY A A REGS+IPPR L TR SVDSF +L
Sbjct: 353 LLCPHFFXXQFTAXXCKRA*HFLQIILSWLYXLAKAIREGSIIPPRXLKTRCSVDSF*IL 174
Query: 564 *SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFPVSVFTKI 734
*SARVRPSSSCFPAKI RCWSGGIPSLSWILA PV VFTKI
Sbjct: 173 *SARVRPSSSCFPAKIKRCWSGGIPSLSWILAFTLSIVSLLSTSRVMVLPVRVFTKI 3
>gb|DR092505.1|DR092505 STRR1_1_F10.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_F10_A033 5', mRNA sequence
Length = 569
Score = 260 bits (562), Expect = 1e-068
Identities = 108/110 (98%), Positives = 108/110 (98%)
Frame = -2 / +2
Query: 685 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGII 506
SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGII
Sbjct: 17 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGII 196
Query: 505 EPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
EPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR KKKIK
Sbjct: 197 EPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 346
Score = 183 bits (395), Expect = 1e-045
Identities = 78/102 (76%), Positives = 83/102 (81%)
Frame = +3 / -3
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 348 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 169
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILA 659
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA
Sbjct: 168 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILA 43
Score = 122 bits (261), Expect = 3e-027
Identities = 53/110 (48%), Positives = 72/110 (65%)
Frame = -1 / +1
Query: 686 EQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APRWNH 507
+QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A +
Sbjct: 16 KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASWGYY 195
Query: 506 *ALSAGARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
A G +VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 196 RAFFDGIGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQ 345
>gb|DR161363.1|DR161363 RTFE1_11_H04.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_11_H04_A029 3', mRNA sequence
Length = 556
Score = 247 bits (533), Expect = 1e-064
Identities = 102/104 (98%), Positives = 102/104 (98%)
Frame = -2 / +2
Query: 667 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQA 488
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL A
Sbjct: 2 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMA 181
Query: 487 LARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
LARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR KKKIK
Sbjct: 182 LARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 313
Score = 183 bits (395), Expect = 1e-045
Identities = 78/102 (76%), Positives = 83/102 (81%)
Frame = +3 / -2
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 315 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 136
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILA 659
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA
Sbjct: 135 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILA 10
Score = 113 bits (242), Expect = 1e-024
Identities = 50/104 (48%), Positives = 66/104 (63%)
Frame = -1 / +1
Query: 668 QCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APRWNH*ALSAG 489
QC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A + A G
Sbjct: 1 QCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASWGYYRAFFDG 180
Query: 488 ARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+VQP QDDL +MLC++AP QL ++EVW+ PA +EE+Q
Sbjct: 181 IGQEVQPRQDDLQKMLCSSAPSSSQLQEKEVWA**PAAAKEENQ 312
>gb|BM902671.1|BM902671 NXLV_057_E11_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_057_E11 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 481
Score = 243 bits (526), Expect = 9e-064
Identities = 100/105 (95%), Positives = 101/105 (96%)
Frame = -2 / +3
Query: 670 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQ 491
DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL
Sbjct: 18 DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLM 197
Query: 490 ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
ALARKYNQDKMIC KCYARLHPRA+NC KKKCGHSNQLR KKKIK
Sbjct: 198 ALARKYNQDKMICXKCYARLHPRAINCXKKKCGHSNQLRPKKKIK 332
Score = 180 bits (387), Expect = 1e-044
Identities = 77/102 (75%), Positives = 82/102 (80%)
Frame = +3 / -1
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QL A GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 334 YLIFFFGRSWLLCPHFFXLQLIARGCRRA*HXLQIILSWLYFLANAIKEGSIIPPRSLST 155
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILA 659
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSWILA
Sbjct: 154 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSWILA 29
Score = 112 bits (239), Expect = 4e-024
Identities = 50/104 (48%), Positives = 64/104 (61%)
Frame = -1 / +2
Query: 668 QCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APRWNH*ALSAG 489
QC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A AP + A G
Sbjct: 20 QCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEAPWGYYRAFFDG 199
Query: 488 ARSQVQPGQDDLPQMLCTTAP*GCQLPQEEVWSQQPAEGQEEDQ 357
+VQP QDDL MLC++AP QL +EVW+ P +EE+Q
Sbjct: 200 IGQEVQPRQDDLQXMLCSSAPSSNQLQXKEVWA**PTAAKEENQ 331
>gb|DR161452.1|DR161452 RTFE1_11_H04.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_11_H04_A029 5', mRNA sequence
Length = 543
Score = 236 bits (509), Expect = 2e-061
Identities = 97/99 (97%), Positives = 97/99 (97%)
Frame = -2 / +1
Query: 652 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQALARKY 473
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL ALARKY
Sbjct: 1 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKY 180
Query: 472 NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR KKKIK
Sbjct: 181 NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 297
Score = 178 bits (383), Expect = 5e-044
Identities = 75/99 (75%), Positives = 80/99 (80%)
Frame = +3 / -2
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 299 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 120
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSW 650
R VDSF ML*SARVRPSS+C PA I RCWSGGIPSLSW
Sbjct: 119 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPSLSW 3
>gb|DR386126.1|DR386126 RTHG1_13_D02.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_D02_A029 3', mRNA sequence
Length = 427
Score = 230 bits (496), Expect(2) = 3e-061
Identities = 94/108 (87%), Positives = 100/108 (92%)
Frame = -2 / +3
Query: 679 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEP 500
DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGIIEP
Sbjct: 3 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEP 182
Query: 499 SLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
SL+ LA KYN +K ICRKCYARL PRA NCRK+ CGHS+QLR KKK+K
Sbjct: 183 SLKVLASKYNCEKQICRKCYARLPPRATNCRKRSCGHSSQLRPKKKLK 326
Score = 137 bits (294), Expect(2) = 7e-032
Identities = 62/83 (74%), Positives = 64/83 (77%)
Frame = +3 / -1
Query: 411 QLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLSTRWSVDSFWML*SARVRPSS 590
QL A G RA*H RQI S LYL A REGSM+PPR ST+ VDSFWML*S RVRPSS
Sbjct: 271 QLVARGGRRA*HFRQICFSQLYLEARTFREGSMMPPRRRSTK*RVDSFWML*SERVRPSS 92
Query: 591 SCFPAKISRCWSGGIPSLSWILA 659
SCFPAKI RC SGGIPSLSWILA
Sbjct: 91 SCFPAKIKRC*SGGIPSLSWILA 23
Score = 26.3 bits (51), Expect(2) = 3e-061
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3 / +3
Query: 309 YCCVVVEPCLFTQHLGL 259
YCCVVV P L T + L
Sbjct: 369 YCCVVVSPQLETSNTSL 419
Score = 21.7 bits (41), Expect(2) = 7e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2 / -1
Query: 275 VNKHGSTTTQQY 310
V+ G TTTQQY
Sbjct: 403 VSSWGETTTQQY 368
>gb|BQ290853.1|BQ290853 NXRV050_D12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV050_D12 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 544
Score = 221 bits (478), Expect(2) = 5e-059
Identities = 91/93 (97%), Positives = 91/93 (97%)
Frame = -2 / +3
Query: 634 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMI 455
IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMI
Sbjct: 30 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMI 209
Query: 454 CRKCYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
CRKCYARLHPRAVNCRKKKCGHSNQLR KKKIK
Sbjct: 210 CRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 308
Score = 164 bits (353), Expect(2) = 1e-040
Identities = 70/94 (74%), Positives = 75/94 (79%)
Frame = +3 / -1
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 310 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 131
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGI 635
R VDSF ML*SARVRPSS+C PA I RCWSGGI
Sbjct: 130 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGI 29
Score = 26.7 bits (52), Expect(2) = 5e-059
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +1
Query: 664 VKAKIQDKEGIPP 626
VKAKIQDKEG P
Sbjct: 1 VKAKIQDKEGSRP 39
Score = 22.6 bits (43), Expect(2) = 1e-040
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -3
Query: 627 GGIPSLSWILA 659
G PSLSWILA
Sbjct: 38 GRDPSLSWILA 6
>gb|DR079692.1|DR079692 RTFEPL1_12_H12.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_12_H12_A029 5', mRNA sequence
Length = 666
Score = 226 bits (489), Expect = 1e-058
Identities = 93/95 (97%), Positives = 93/95 (97%)
Frame = -2 / +2
Query: 640 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDK 461
EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDK
Sbjct: 2 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDK 181
Query: 460 MICRKCYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
MICRKCYARLHPRAVNCRKKKCGHSNQLR KKKIK
Sbjct: 182 MICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
Score = 169 bits (364), Expect = 2e-041
Identities = 72/96 (75%), Positives = 77/96 (80%)
Frame = +3 / -1
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFF SWLL PHFF QLTA GC RA*H QIILSWLY A+A +EGS+IPPRSLST
Sbjct: 288 YLIFFFGRSWLLCPHFFFLQLTARGCRRA*HFLQIILSWLYFLANAIKEGSIIPPRSLST 109
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPS 641
R VDSF ML*SARVRPSS+C PA I RCWSGGIPS
Sbjct: 108 RCKVDSF*ML*SARVRPSSNCLPANIRRCWSGGIPS 1
>gb|BF221431.1|BF221431 NXCI_165_F05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_165_F05 5' similar to Arabidopsis
thaliana sequence At3g52590 ubiquitin / ribosomal
protein CEP52 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 306
Score = 221 bits (478), Expect = 4e-057
Identities = 95/102 (93%), Positives = 95/102 (93%)
Frame = -2 / +1
Query: 733 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 554
IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ
Sbjct: 1 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 180
Query: 553 KESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLH 428
KESTLHLVL RGGIIEPSL LA NQDKMICRKCYARLH
Sbjct: 181 KESTLHLVLXXRGGIIEPSLMXLAXXXNQDKMICRKCYARLH 306
Score = 151 bits (325), Expect = 5e-036
Identities = 67/101 (66%), Positives = 69/101 (68%)
Frame = +3 / -2
Query: 429 CSRA*HLRQIILSWLYLRASACREGSMIPPRSLSTRWSVDSFWML*SARVRPSSSCFPAK 608
C RA*H QIILSWL A REGS+IPPR L TR SVDSF +L*SARVRPSSSCFPAK
Sbjct: 305 CKRA*HFLQIILSWLXXLAXXIREGSIIPPRXLKTRCSVDSF*IL*SARVRPSSSCFPAK 126
Query: 609 ISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFPVSVFTK 731
I RCWSGGIPSLSWILA PV VFTK
Sbjct: 125 IKRCWSGGIPSLSWILAFTLSIVSLLSTSRVMVLPVRVFTK 3
>gb|DR386206.1|DR386206 RTHG1_13_D02.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_D02_A029 5', mRNA sequence
Length = 434
Score = 213 bits (460), Expect(2) = 2e-056
Identities = 87/101 (86%), Positives = 93/101 (92%)
Frame = -2 / +3
Query: 658 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQALAR 479
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGIIEPSL+ LA
Sbjct: 12 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKVLAS 191
Query: 478 KYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
KYN +K ICRKCYARL PRA NCRK+ CGHS+QLR KKK+K
Sbjct: 192 KYNCEKQICRKCYARLPPRATNCRKRSCGHSSQLRPKKKLK 314
Score = 137 bits (294), Expect(2) = 7e-032
Identities = 62/83 (74%), Positives = 64/83 (77%)
Frame = +3 / -2
Query: 411 QLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLSTRWSVDSFWML*SARVRPSS 590
QL A G RA*H RQI S LYL A REGSM+PPR ST+ VDSFWML*S RVRPSS
Sbjct: 259 QLVARGGRRA*HFRQICFSQLYLEARTFREGSMMPPRRRSTK*RVDSFWML*SERVRPSS 80
Query: 591 SCFPAKISRCWSGGIPSLSWILA 659
SCFPAKI RC SGGIPSLSWILA
Sbjct: 79 SCFPAKIKRC*SGGIPSLSWILA 11
Score = 26.3 bits (51), Expect(2) = 2e-056
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3 / +3
Query: 309 YCCVVVEPCLFTQHLGL 259
YCCVVV P L T + L
Sbjct: 357 YCCVVVSPQLETSNTSL 407
Score = 21.7 bits (41), Expect(2) = 7e-032
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2 / -2
Query: 275 VNKHGSTTTQQY 310
V+ G TTTQQY
Sbjct: 391 VSSWGETTTQQY 356
>gb|BM158593.1|BM158593 NXLV_036_F07_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_036_F07 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 340
Score = 215 bits (464), Expect = 3e-055
Identities = 90/92 (97%), Positives = 91/92 (98%)
Frame = -2 / +3
Query: 691 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 512
VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 18 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 197
Query: 511 IIEPSLQALARKYNQDKMICRKCYARLHPRAV 416
IIEPSL ALARKYNQDKMICRKCYAR+HPRAV
Sbjct: 198 IIEPSLMALARKYNQDKMICRKCYARMHPRAV 293
Score = 149 bits (320), Expect = 2e-035
Identities = 64/81 (79%), Positives = 68/81 (83%)
Frame = +3 / -1
Query: 417 TALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLSTRWSVDSFWML*SARVRPSSSC 596
TA GC RA*H QIILSWLY A+A +EGS+IPPRSLSTR VDSF ML*SARVRPSS+C
Sbjct: 292 TARGCIRA*HFLQIILSWLYFLANAIKEGSIIPPRSLSTRCKVDSF*ML*SARVRPSSNC 113
Query: 597 FPAKISRCWSGGIPSLSWILA 659
PA I RCWSGGIPSLSWILA
Sbjct: 112 LPANIRRCWSGGIPSLSWILA 50
Score = 103 bits (219), Expect = 2e-021
Identities = 45/90 (50%), Positives = 58/90 (64%)
Frame = -1 / +2
Query: 695 RGREQRHHRQCQGQDPGQGRDPAGPAAADLCREAAGGWPHPCGL*HPKGVYAPPRA*APR 516
RG +QR++RQC+GQ+PGQ RDPA PA +D+C +A G W H GL H + V P A A
Sbjct: 14 RG*KQRYNRQCEGQNPGQRRDPARPATSDICGQAVGRWTHSGGLQHSERVNLAPCAEASW 193
Query: 515 WNH*ALSAGARSQVQPGQDDLPQMLCTTAP 426
+ A G +VQP QDDL +MLC+ AP
Sbjct: 194 GYYRAFFDGIGQEVQPRQDDLQKMLCSYAP 283
>gb|DR743078.1|DR743078 RTCU1_13_H11.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_13_H11_A029 3', mRNA sequence
Length = 603
Score = 213 bits (460), Expect = 1e-054
Identities = 88/90 (97%), Positives = 88/90 (97%)
Frame = -2 / -1
Query: 625 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRK 446
DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRK
Sbjct: 576 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRK 397
Query: 445 CYARLHPRAVNCRKKKCGHSNQLRAKKKIK 356
CYARLHPRAVNCRKKKCGHSNQLR KKKIK
Sbjct: 396 CYARLHPRAVNCRKKKCGHSNQLRPKKKIK 307
Score = 160 bits (345), Expect = 9e-039
Identities = 70/91 (76%), Positives = 74/91 (81%)
Frame = +3 / +2
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A +EGS+IPPRSL T
Sbjct: 305 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIKEGSIIPPRSLKT 484
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKISRCWS 626
R SVDSF +L*SARVRPSSSCFPAKI RCWS
Sbjct: 485 RCSVDSF*IL*SARVRPSSSCFPAKIKRCWS 577
>gb|AW755225.1|AW755225 PC12F04 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC12F04, mRNA sequence
Length = 332
Score = 210 bits (454), Expect = 8e-054
Identities = 91/103 (88%), Positives = 94/103 (91%)
Frame = -2 / +1
Query: 739 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 560
MQIFVKTLTGKTIT EVESSDTIDNVK+KIQDKEGIPP RLIFAGKQLED TL+DYN
Sbjct: 22 MQIFVKTLTGKTITFEVESSDTIDNVKSKIQDKEGIPPXXXRLIFAGKQLEDXXTLSDYN 201
Query: 559 IQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARL 431
IQKESTLHLVLRLRGGIIEPSL+ALA KYN DKMICR CYARL
Sbjct: 202 IQKESTLHLVLRLRGGIIEPSLKALASKYNCDKMICRXCYARL 330
Score = 119 bits (254), Expect = 3e-026
Identities = 59/102 (57%), Positives = 62/102 (60%)
Frame = +3 / -1
Query: 435 RA*HLRQIILSWLYLRASACREGSMIPPRSLSTRWSVDSFWML*SARVRPSSSCFPAKIS 614
RA* RQIILS LY A A EGSMIPPR T+ VDSF ML*S RV SSSCFPAKI+
Sbjct: 326 RA*XXRQIILSQLYFEARALSEGSMIPPRRRRTK*RVDSF*ML*SLRVXXSSSCFPAKIN 147
Query: 615 RCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFPVSVFTKICI 740
R GG+PSLSWIL PV V TKICI
Sbjct: 146 RXXXGGMPSLSWILLLTLSMVSLDSTSKVMVLPVRVLTKICI 21
>gb|BQ698758.1|BQ698758 NXNV_063_C12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_063_C12 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 290
Score = 208 bits (449), Expect = 4e-053
Identities = 91/96 (94%), Positives = 91/96 (94%)
Frame = -2 / +3
Query: 742 KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 563
KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY
Sbjct: 3 KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 182
Query: 562 NIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMI 455
NIQKESTLHLVL LRGGI EPSL ALA KYNQD MI
Sbjct: 183 NIQKESTLHLVLXLRGGIXEPSLMALAXKYNQDXMI 290
Score = 145 bits (311), Expect = 4e-034
Identities = 64/96 (66%), Positives = 65/96 (67%)
Frame = +3 / -2
Query: 456 IILSWLYLRASACREGSMIPPRSLSTRWSVDSFWML*SARVRPSSSCFPAKISRCWSGGI 635
I SWLY A A REGS IPPR TR SVDSF +L*SARVRPSSSCFPAKI RCWSGGI
Sbjct: 289 IXXSWLYXLAKAIREGSXIPPRXXKTRCSVDSF*IL*SARVRPSSSCFPAKIKRCWSGGI 110
Query: 636 PSLSWILAXXXXXXXXXXXXXXXXFPVSVFTKICIL 743
PSLSWILA PV VFTKICIL
Sbjct: 109 PSLSWILAFTLSIVSLLSTSRVMVLPVRVFTKICIL 2
>gb|BX680665.1|BX680665 BX680665 RS Pinus pinaster cDNA clone RS47A01, mRNA sequence
Length = 520
Score = 204 bits (439), Expect = 9e-052
Identities = 84/86 (97%), Positives = 84/86 (97%)
Frame = -2 / +1
Query: 613 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYAR 434
LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYAR
Sbjct: 16 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYAR 195
Query: 433 LHPRAVNCRKKKCGHSNQLRAKKKIK 356
LHPRAVNCRKKKCGHSNQLR KKKIK
Sbjct: 196 LHPRAVNCRKKKCGHSNQLRPKKKIK 273
Score = 148 bits (317), Expect = 6e-035
Identities = 66/87 (75%), Positives = 71/87 (81%)
Frame = +3 / -3
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A +EGS+IPPRSL T
Sbjct: 275 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIKEGSIIPPRSLKT 96
Query: 534 RWSVDSFWML*SARVRPSSSCFPAKIS 614
R SVDSF +L*SARVRPSSSCFPAKI+
Sbjct: 95 RCSVDSF*IL*SARVRPSSSCFPAKIN 15
>gb|AA556209.1|AA556209 64 Loblolly pine N Pinus taeda cDNA clone 2N9F, mRNA sequence
Length = 524
Score = 143 bits (306), Expect(3) = 3e-049
Identities = 61/67 (91%), Positives = 64/67 (95%)
Frame = -2 / +3
Query: 748 SNKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 569
++ MQIFVKTLTGKTITLE ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE GRTLA
Sbjct: 15 ASXMQIFVKTLTGKTITLEXESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLA 194
Query: 568 DYNIQKE 548
DYNIQK+
Sbjct: 195 DYNIQKD 215
Score = 94.1 bits (199), Expect(3) = 9e-028
Identities = 42/66 (63%), Positives = 43/66 (65%)
Frame = +3 / -2
Query: 549 SFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXXXXXXXXXFPVSVFT 728
SF ML*SARVRP S+C PA I RCWSGGIPSLSWILA PV VFT
Sbjct: 214 SF*ML*SARVRPXSNCLPANIRRCWSGGIPSLSWILAFTLSIVSLLSXSKVMVLPVRVFT 35
Query: 729 KICILL 746
KIC LL
Sbjct: 34 KICXLL 17
Score = 51.0 bits (105), Expect(3) = 3e-049
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -2 / +2
Query: 553 KESTLHLVLRLRGGIIEPSLQALAR 479
+ STLHLVLRLRGGIIEPSL ALAR
Sbjct: 209 ERSTLHLVLRLRGGIIEPSLMALAR 283
Score = 40.5 bits (82), Expect(3) = 3e-049
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -2 / +3
Query: 472 NQDKMICRKCYARLH 428
+QDKMICRKCYARLH
Sbjct: 288 HQDKMICRKCYARLH 332
Score = 39.1 bits (79), Expect(3) = 9e-028
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / -3
Query: 483 ASACREGSMIPPRSLSTRWSVD 548
A+A +EGS+IPPRSLSTR VD
Sbjct: 279 ANAIKEGSIIPPRSLSTRCKVD 214
Score = 28.6 bits (56), Expect(3) = 9e-028
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3 / -2
Query: 429 CSRA*HLRQIILSW 470
C RA*H QIILSW
Sbjct: 331 CRRA*HFLQIILSW 290
>gb|BQ700146.1|BQ700146 NXRV101_G05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV101_G05 5' similar to Arabidopsis thaliana
sequence At3g52590 ubiquitin / ribosomal protein CEP52
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 557
Score = 192 bits (414), Expect = 3e-048
Identities = 79/82 (96%), Positives = 79/82 (96%)
Frame = -2 / +1
Query: 601 GKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPR 422
GKQLE GRTLADYNIQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPR
Sbjct: 4 GKQLEXGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPR 183
Query: 421 AVNCRKKKCGHSNQLRAKKKIK 356
AVNCRKKKCGHSNQLR KKKIK
Sbjct: 184 AVNCRKKKCGHSNQLRPKKKIK 249
Score = 142 bits (304), Expect = 4e-033
Identities = 63/83 (75%), Positives = 66/83 (79%)
Frame = +3 / -1
Query: 354 FLIFFLALSWLL*PHFFLRQLTALGCSRA*HLRQIILSWLYLRASACREGSMIPPRSLST 533
+LIFFL LS LL PHFF Q TALGC RA*H QIILSWLY A A REGS+IPPRSL T
Sbjct: 251 YLIFFLGLS*LLCPHFFFLQFTALGCKRA*HFLQIILSWLYFLAKAIREGSIIPPRSLKT 72
Query: 534 RWSVDSFWML*SARVRPSSSCFP 602
R SVDSF +L*SARVRP SSCFP
Sbjct: 71 RCSVDSFCIL*SARVRPXSSCFP 3
>gb|CO160608.1|CO160608 FLD1_22_F04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_22_F04_A029 3', mRNA sequence
Length = 823
Score = 177 bits (382), Expect(2) = 2e-045
Identities = 76/78 (97%), Positives = 78/78 (100%)
Frame = -2 / +3
Query: 745 NKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 566
+KMQIFVKTLTGKTITLEVE+SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 105 SKMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 284
Query: 565 YNIQKESTLHLVLRLRGG 512
YNIQKESTLHLVLRLRGG
Sbjct: 285 YNIQKESTLHLVLRLRGG 338
Score = 112 bits (239), Expect = 4e-024
Identities = 49/79 (62%), Positives = 51/79 (64%)
Frame = +3 / -1
Query: 507 MIPPRSLSTRWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXX 686
+ PP S TR VDSF ML*SA VRPSSSCFPA I RCWSGGIPSLSWILA
Sbjct: 343 LAPPLSRRTRCRVDSF*ML*SANVRPSSSCFPANIRRCWSGGIPSLSWILALTLSIVSEA 164
Query: 687 XXXXXXXFPVSVFTKICIL 743
PV+VFT ICIL
Sbjct: 163 STSSVIVLPVNVFTNICIL 107
Score = 25.4 bits (49), Expect(2) = 2e-045
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1 / +2
Query: 407 QEEVWSQQPAEGQEEDQELRC 345
+E++ Q A+ QEE+ + RC
Sbjct: 353 EEDLHEAQEAQAQEEEDQARC 415
>gb|DR080556.1|DR080556 RTFEPL1_23_C02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_23_C02_A029 5', mRNA sequence
Length = 764
Score = 177 bits (382), Expect(2) = 2e-045
Identities = 76/78 (97%), Positives = 78/78 (100%)
Frame = -2 / +2
Query: 745 NKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 566
+KMQIFVKTLTGKTITLEVE+SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 14 SKMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 193
Query: 565 YNIQKESTLHLVLRLRGG 512
YNIQKESTLHLVLRLRGG
Sbjct: 194 YNIQKESTLHLVLRLRGG 247
Score = 112 bits (239), Expect = 4e-024
Identities = 49/79 (62%), Positives = 51/79 (64%)
Frame = +3 / -3
Query: 507 MIPPRSLSTRWSVDSFWML*SARVRPSSSCFPAKISRCWSGGIPSLSWILAXXXXXXXXX 686
+ PP S TR VDSF ML*SA VRPSSSCFPA I RCWSGGIPSLSWILA
Sbjct: 252 LAPPLSRRTRCRVDSF*ML*SANVRPSSSCFPANIRRCWSGGIPSLSWILALTLSIVSEA 73
Query: 687 XXXXXXXFPVSVFTKICIL 743
PV+VFT ICIL
Sbjct: 72 STSSVIVLPVNVFTNICIL 16
Score = 25.4 bits (49), Expect(2) = 2e-045
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1 / +1
Query: 407 QEEVWSQQPAEGQEEDQELRC 345
+E++ Q A+ QEE+ + RC
Sbjct: 262 EEDLHEAQEAQAQEEEDQARC 324
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 447,695,487
Number of Sequences: 355925
Number of extensions: 7177060
Number of successful extensions: 80934
Number of sequences better than 1.0e-020: 2720
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 12508893640
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)