TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.680
(461 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI812944.1|AI812944 22G12 Pine Lambda Zap Xylem library ... 140 5e-033
gb|CO162703.1|CO162703 FLD1_37_B04.b1_A029 Root flooded Pin... 140 5e-033
gb|CO162784.1|CO162784 FLD1_37_B04.g1_A029 Root flooded Pin... 140 5e-033
gb|CO164789.1|CO164789 FLD1_50_G08.b1_A029 Root flooded Pin... 140 5e-033
gb|CO164871.1|CO164871 FLD1_50_G08.g1_A029 Root flooded Pin... 140 5e-033
gb|CO167141.1|CO167141 FLD1_67_D01.b1_A029 Root flooded Pin... 140 5e-033
gb|CO170812.1|CO170812 NDL1_17_C09.b1_A029 Needles control ... 140 5e-033
gb|CO198700.1|CO198700 GEO1_15_G10.g1_A029 Root gravitropis... 140 5e-033
gb|CO370312.1|CO370312 RTK1_67_C05.b1_A029 Roots minus pota... 140 5e-033
gb|CX650502.1|CX650502 COLD1_46_D07.b1_A029 Root cold Pinus... 140 5e-033
gb|DR015317.1|DR015317 STRS1_2_F07.g1_A034 Shoot tip pitch ... 140 5e-033
gb|DR015930.1|DR015930 STRS1_6_C10.g1_A034 Shoot tip pitch ... 140 5e-033
gb|DR018826.1|DR018826 STRS1_26_A10.b2_A034 Shoot tip pitch... 140 5e-033
gb|DR018960.1|DR018960 STRS1_27_A10.b1_A034 Shoot tip pitch... 140 5e-033
gb|DR019041.1|DR019041 STRS1_27_A10.g1_A034 Shoot tip pitch... 140 5e-033
gb|DR019434.1|DR019434 STRS1_30_B02.b1_A034 Shoot tip pitch... 140 5e-033
gb|DR019436.1|DR019436 STRS1_30_B05.b1_A034 Shoot tip pitch... 140 5e-033
gb|DR019506.1|DR019506 STRS1_30_B05.g1_A034 Shoot tip pitch... 140 5e-033
gb|DR022357.1|DR022357 STRS1_50_B12.g1_A034 Shoot tip pitch... 140 5e-033
gb|DR023542.1|DR023542 STRS1_58_H07.b1_A034 Shoot tip pitch... 140 5e-033
gb|DR055331.1|DR055331 RTCA1_23_B04.b1_A029 Roots minus cal... 140 5e-033
gb|DR055669.1|DR055669 RTCA1_25_D10.b1_A029 Roots minus cal... 140 5e-033
gb|DR060319.1|DR060319 RTNIT1_27_C12.b1_A029 Roots minus ni... 140 5e-033
gb|DR081289.1|DR081289 RTFEPL1_28_D04.g1_A029 Roots plus ad... 140 5e-033
gb|DR092693.1|DR092693 STRR1_3_E02.b1_A033 Stem Response Re... 140 5e-033
gb|DR109585.1|DR109585 RTS1_3_F11.b1_A029 Roots minus sulfu... 140 5e-033
gb|DR119088.1|DR119088 RTMG1_21_C02.b1_A029 Roots minus mag... 140 5e-033
gb|DR119157.1|DR119157 RTMG1_21_C02.g1_A029 Roots minus mag... 140 5e-033
gb|DR165772.1|DR165772 RTPHOS1_7_F02.b1_A029 Roots minus ph... 140 5e-033
gb|DR165853.1|DR165853 RTPHOS1_7_F02.g1_A029 Roots minus ph... 140 5e-033
gb|DR385328.1|DR385328 RTHG1_8_B04.b1_A029 Roots plus added... 140 5e-033
gb|DR386244.1|DR386244 RTHG1_13_G10.g1_A029 Roots plus adde... 140 5e-033
gb|CF663717.1|CF663717 RTCNT1_4_E08.g1_A029 Root control Pi... 140 6e-033
gb|BX784188.1|BX784188 BX784188 Pinus pinaster differenciat... 140 6e-033
gb|CO198151.1|CO198151 GEO1_11_D06.g1_A029 Root gravitropis... 140 6e-033
gb|CO365340.1|CO365340 RTK1_25_C10.b1_A029 Roots minus pota... 140 6e-033
gb|CO370549.1|CO370549 RTK1_68_D04.g1_A029 Roots minus pota... 140 6e-033
gb|DR049974.1|DR049974 RTBOR1_20_A01.g1_A029 Roots plus add... 140 6e-033
gb|DR050236.1|DR050236 RTBOR1_22_D10.b1_A029 Roots plus add... 140 6e-033
gb|DR050316.1|DR050316 RTBOR1_22_D10.g1_A029 Roots plus add... 140 6e-033
gb|DR117464.1|DR117464 RTMG1_7_D06.b1_A029 Roots minus magn... 140 6e-033
gb|DR117547.1|DR117547 RTMG1_7_D06.g1_A029 Roots minus magn... 140 6e-033
gb|DR385595.1|DR385595 RTHG1_9_D06.g1_A029 Roots plus added... 140 6e-033
gb|DR387015.1|DR387015 RTHG1_18_G07.g1_A029 Roots plus adde... 140 6e-033
gb|DR744291.1|DR744291 RTCU1_21_B02.g1_A029 Roots plus adde... 140 6e-033
gb|CX650615.1|CX650615 COLD1_46_H05.g1_A029 Root cold Pinus... 139 9e-033
gb|CF394023.1|CF394023 RTDS2_2_E04.g1_A021 Drought-stressed... 139 1e-032
gb|CO163180.1|CO163180 FLD1_40_B01.b1_A029 Root flooded Pin... 138 2e-032
gb|DR015725.1|DR015725 STRS1_5_F07.b1_A034 Shoot tip pitch ... 138 2e-032
gb|BQ634287.1|BQ634287 NXRV067_A07_F NXRV (Nsf Xylem Root w... 138 3e-032
gb|BQ634709.1|BQ634709 NXRV072_C12_F NXRV (Nsf Xylem Root w... 138 3e-032
gb|DR089774.1|DR089774 RTAL1_10_E12.g1_A029 Roots plus adde... 138 3e-032
gb|DR072361.1|DR072361 RTDK1_25_F11.g1_A029 Roots, dark Pin... 137 6e-032
gb|DR742023.1|DR742023 RTCU1_1_E12.b1_A029 Roots plus added... 136 8e-032
gb|DR742100.1|DR742100 RTCU1_1_E12.g1_A029 Roots plus added... 136 8e-032
gb|DR742109.1|DR742109 RTCU1_1_F12.g1_A029 Roots plus added... 136 8e-032
gb|DR745129.1|DR745129 RTCU1_27_E11.b1_A029 Roots plus adde... 136 8e-032
gb|DR745200.1|DR745200 RTCU1_27_E11.g1_A029 Roots plus adde... 136 8e-032
gb|DR101356.1|DR101356 STRR1_72_G11.b1_A033 Stem Response R... 135 2e-031
gb|BF610148.1|BF610148 NXSI_055_C08_F NXSI (Nsf Xylem Side ... 135 2e-031
gb|CF664953.1|CF664953 RTCNT1_13_A06.b1_A029 Root control P... 135 2e-031
gb|DR090601.1|DR090601 RTAL1_16_E05.b1_A029 Roots plus adde... 135 2e-031
gb|BQ634195.1|BQ634195 NXRV064_H09_F NXRV (Nsf Xylem Root w... 134 3e-031
gb|CF667646.1|CF667646 RTCNT1_31_D11.g1_A029 Root control P... 133 5e-031
gb|DR015050.1|DR015050 STRS1_1_E06.b1_A034 Shoot tip pitch ... 133 1e-030
gb|DR015133.1|DR015133 STRS1_1_E06.g1_A034 Shoot tip pitch ... 133 1e-030
gb|DR090676.1|DR090676 RTAL1_16_E05.g1_A029 Roots plus adde... 132 2e-030
gb|DR088873.1|DR088873 RTAL1_5_E05.b1_A029 Roots plus added... 130 5e-030
gb|CF665508.1|CF665508 RTCNT1_16_A06.g1_A029 Root control P... 130 7e-030
gb|CV036552.1|CV036552 RTNACL1_60_B12.b1_A029 Roots plus ad... 130 7e-030
gb|CV036619.1|CV036619 RTNACL1_60_B12.g1_A029 Roots plus ad... 130 7e-030
gb|BQ634283.1|BQ634283 NXRV067_A03_F NXRV (Nsf Xylem Root w... 129 1e-029
gb|CF667489.1|CF667489 RTCNT1_30_D03.g1_A029 Root control P... 129 1e-029
gb|BX249370.1|BX249370 BX249370 Pinus pinaster differenciat... 128 2e-029
gb|CF395120.1|CF395120 RTDS2_9_A02.g1_A021 Drought-stressed... 87 4e-029
gb|DR385514.1|DR385514 RTHG1_9_D06.b1_A029 Roots plus added... 127 5e-029
gb|DT625022.1|DT625022 EST1159297 Sequencing ESTs from lobl... 127 5e-029
gb|BF517646.1|BF517646 NXSI_028_C04_F NXSI (Nsf Xylem Side ... 126 1e-028
gb|BG040865.1|BG040865 NXSI_116_A11_F NXSI (Nsf Xylem Side ... 126 1e-028
gb|BQ106776.1|BQ106776 NXLV089_C10_F NXLV (Nsf Xylem Late w... 125 2e-028
gb|DR092259.1|DR092259 RTAL1_28_A09.b1_A029 Roots plus adde... 125 2e-028
gb|CO369362.1|CO369362 RTK1_46_D01.g1_A029 Roots minus pota... 125 2e-028
gb|BQ634246.1|BQ634246 NXRV066_E11_F NXRV (Nsf Xylem Root w... 124 4e-028
gb|DR102019.1|DR102019 STRR1_77_C01.g1_A033 Stem Response R... 124 4e-028
gb|CO163260.1|CO163260 FLD1_40_B01.g1_A029 Root flooded Pin... 123 6e-028
gb|CF391267.1|CF391267 RTDR3_4_H08.g1_A022 Loblolly pine ro... 123 8e-028
gb|CO363287.1|CO363287 RTK1_8_F11.g1_A029 Roots minus potas... 123 8e-028
gb|CO367254.1|CO367254 RTK1_33_E04.b1_A029 Roots minus pota... 123 8e-028
gb|CV135705.1|CV135705 EST846914 Sequencing ESTs from loblo... 121 4e-027
gb|CF396120.1|CF396120 RTDS2_13_H06.g1_A021 Drought-stresse... 97 1e-026
gb|CX648487.1|CX648487 COLD1_29_A11.b1_A029 Root cold Pinus... 119 1e-026
gb|BQ634579.1|BQ634579 NXRV070_F11_F NXRV (Nsf Xylem Root w... 117 4e-026
gb|BQ634705.1|BQ634705 NXRV072_C08_F NXRV (Nsf Xylem Root w... 117 4e-026
gb|CO198640.1|CO198640 GEO1_15_G10.b1_A029 Root gravitropis... 117 5e-026
gb|CO370335.1|CO370335 RTK1_67_E10.b1_A029 Roots minus pota... 117 5e-026
gb|DR022286.1|DR022286 STRS1_50_B12.b1_A034 Shoot tip pitch... 117 5e-026
gb|DR094847.1|DR094847 STRR1_17_D09.b1_A033 Stem Response R... 117 5e-026
gb|CF667418.1|CF667418 RTCNT1_30_D03.b1_A029 Root control P... 116 7e-026
gb|BQ634282.1|BQ634282 NXRV067_A02_F NXRV (Nsf Xylem Root w... 116 9e-026
gb|CF394977.1|CF394977 RTDS2_8_B01.g1_A021 Drought-stressed... 115 2e-025
gb|DR181355.1|DR181355 RTMNUT1_38_H12.b2_A029 Roots minus m... 115 2e-025
gb|CF663638.1|CF663638 RTCNT1_4_E08.b1_A029 Root control Pi... 115 2e-025
gb|CF474863.1|CF474863 RTWW2_8_E08.g1_A021 Well-watered lob... 113 9e-025
gb|CF672828.1|CF672828 RTCNT1_74_E08.b1_A029 Root control P... 113 9e-025
gb|DR100799.1|DR100799 STRR1_68_D06.b1_A033 Stem Response R... 112 1e-024
gb|DR095881.1|DR095881 STRR1_24_F04.b1_A033 Stem Response R... 111 3e-024
gb|DR388036.1|DR388036 RTHG1_25_F08.g1_A029 Roots plus adde... 111 4e-024
gb|DR742910.1|DR742910 RTCU1_7_F11.g2_A029 Roots plus added... 111 4e-024
gb|DR049913.1|DR049913 RTBOR1_20_A01.b1_A029 Roots plus add... 110 6e-024
gb|BX253436.1|BX253436 BX253436 Pinus pinaster differenciat... 109 1e-023
gb|DN457387.1|DN457387 EST953186 Sequencing ESTs from loblo... 109 1e-023
gb|DN631750.1|DN631750 EST982566 Subtracted pine embryo lib... 109 2e-023
gb|DR072378.1|DR072378 RTDK1_26_A04.b1_A029 Roots, dark Pin... 108 2e-023
gb|CO174346.1|CO174346 NDL1_43_A11.g1_A029 Needles control ... 108 3e-023
gb|BQ634601.1|BQ634601 NXRV070_H12_F NXRV (Nsf Xylem Root w... 107 4e-023
gb|CX651399.1|CX651399 COLD1_52_D06.b1_A029 Root cold Pinus... 106 7e-023
gb|BF049640.1|BF049640 NXCI_108_D04_F NXCI (Nsf Xylem Compr... 105 1e-022
gb|BF778720.1|BF778720 NXSI_086_C06_F NXSI (Nsf Xylem Side ... 105 3e-022
gb|BF169906.1|BF169906 NXCI_127_H07_F NXCI (Nsf Xylem Compr... 104 5e-022
gb|DN465628.1|DN465628 EST961427 Sequencing ESTs from loblo... 104 5e-022
gb|DR054424.1|DR054424 RTCA1_17_F04.b1_A029 Roots minus cal... 103 7e-022
gb|DR386162.1|DR386162 RTHG1_13_G10.b1_A029 Roots plus adde... 103 7e-022
gb|BQ634588.1|BQ634588 NXRV070_G09_F NXRV (Nsf Xylem Root w... 80 3e-021
gb|CX648563.1|CX648563 COLD1_29_A11.g1_A029 Root cold Pinus... 101 3e-021
gb|DN451745.1|DN451745 EST947544 Sequencing ESTs from loblo... 101 3e-021
gb|DN460975.1|DN460975 EST956774 Sequencing ESTs from loblo... 101 3e-021
gb|DR742032.1|DR742032 RTCU1_1_F12.b1_A029 Roots plus added... 101 3e-021
>gb|AI812944.1|AI812944 22G12 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 580
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 160 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 339
Query: 261 LY 256
LY
Sbjct: 340 LY 345
>gb|CO162703.1|CO162703 FLD1_37_B04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_37_B04_A029 3', mRNA sequence
Length = 857
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 81 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 260
Query: 261 LY 256
LY
Sbjct: 261 LY 266
>gb|CO162784.1|CO162784 FLD1_37_B04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_37_B04_A029 5', mRNA sequence
Length = 878
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 154 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 333
Query: 261 LY 256
LY
Sbjct: 334 LY 339
>gb|CO164789.1|CO164789 FLD1_50_G08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_G08_A029 3', mRNA sequence
Length = 813
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 37 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 216
Query: 261 LY 256
LY
Sbjct: 217 LY 222
>gb|CO164871.1|CO164871 FLD1_50_G08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_G08_A029 5', mRNA sequence
Length = 839
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 241 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 420
Query: 261 LY 256
LY
Sbjct: 421 LY 426
>gb|CO167141.1|CO167141 FLD1_67_D01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_D01_A029 3', mRNA sequence
Length = 872
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 449 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 628
Query: 261 LY 256
LY
Sbjct: 629 LY 634
>gb|CO170812.1|CO170812 NDL1_17_C09.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_17_C09_A029 3', mRNA sequence
Length = 737
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 2 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 181
Query: 261 LY 256
LY
Sbjct: 182 LY 187
>gb|CO198700.1|CO198700 GEO1_15_G10.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_15_G10_A029 5', mRNA sequence
Length = 754
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 97 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 276
Query: 261 LY 256
LY
Sbjct: 277 LY 282
>gb|CO370312.1|CO370312 RTK1_67_C05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_67_C05_A029 3', mRNA sequence
Length = 863
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 91 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 270
Query: 261 LY 256
LY
Sbjct: 271 LY 276
>gb|CX650502.1|CX650502 COLD1_46_D07.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_46_D07_A029 3', mRNA sequence
Length = 779
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 4 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 183
Query: 261 LY 256
LY
Sbjct: 184 LY 189
>gb|DR015317.1|DR015317 STRS1_2_F07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_F07_A034 5', mRNA sequence
Length = 900
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / -1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 753 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 574
Query: 261 LY 256
LY
Sbjct: 573 LY 568
>gb|DR015930.1|DR015930 STRS1_6_C10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_6_C10_A034 5', mRNA sequence
Length = 860
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 25 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 204
Query: 261 LY 256
LY
Sbjct: 205 LY 210
>gb|DR018826.1|DR018826 STRS1_26_A10.b2_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_26_A10_A034 3', mRNA sequence
Length = 810
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 36 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 215
Query: 261 LY 256
LY
Sbjct: 216 LY 221
>gb|DR018960.1|DR018960 STRS1_27_A10.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_27_A10_A034 3', mRNA sequence
Length = 812
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 36 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 215
Query: 261 LY 256
LY
Sbjct: 216 LY 221
>gb|DR019041.1|DR019041 STRS1_27_A10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_27_A10_A034 5', mRNA sequence
Length = 852
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 376 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 555
Query: 261 LY 256
LY
Sbjct: 556 LY 561
>gb|DR019434.1|DR019434 STRS1_30_B02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_30_B02_A034 3', mRNA sequence
Length = 789
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 14 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 193
Query: 261 LY 256
LY
Sbjct: 194 LY 199
>gb|DR019436.1|DR019436 STRS1_30_B05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_30_B05_A034 3', mRNA sequence
Length = 861
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / -2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 728 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 549
Query: 261 LY 256
LY
Sbjct: 548 LY 543
>gb|DR019506.1|DR019506 STRS1_30_B05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_30_B05_A034 5', mRNA sequence
Length = 774
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / -3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 742 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 563
Query: 261 LY 256
LY
Sbjct: 562 LY 557
>gb|DR022357.1|DR022357 STRS1_50_B12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_50_B12_A034 5', mRNA sequence
Length = 686
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 125 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 304
Query: 261 LY 256
LY
Sbjct: 305 LY 310
>gb|DR023542.1|DR023542 STRS1_58_H07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_58_H07_A034 3', mRNA sequence
Length = 779
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 17 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 196
Query: 261 LY 256
LY
Sbjct: 197 LY 202
>gb|DR055331.1|DR055331 RTCA1_23_B04.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_B04_A029 3', mRNA sequence
Length = 812
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / -3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 525 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 346
Query: 261 LY 256
LY
Sbjct: 345 LY 340
>gb|DR055669.1|DR055669 RTCA1_25_D10.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_25_D10_A029 3', mRNA sequence
Length = 805
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 21 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 200
Query: 261 LY 256
LY
Sbjct: 201 LY 206
>gb|DR060319.1|DR060319 RTNIT1_27_C12.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_27_C12_A029 3', mRNA sequence
Length = 739
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 21 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 200
Query: 261 LY 256
LY
Sbjct: 201 LY 206
>gb|DR081289.1|DR081289 RTFEPL1_28_D04.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_28_D04_A029 5', mRNA sequence
Length = 674
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 166 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 345
Query: 261 LY 256
LY
Sbjct: 346 LY 351
>gb|DR092693.1|DR092693 STRR1_3_E02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_3_E02_A033 3', mRNA sequence
Length = 763
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 36 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 215
Query: 261 LY 256
LY
Sbjct: 216 LY 221
>gb|DR109585.1|DR109585 RTS1_3_F11.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_3_F11_A029 3', mRNA sequence
Length = 803
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 20 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 199
Query: 261 LY 256
LY
Sbjct: 200 LY 205
>gb|DR119088.1|DR119088 RTMG1_21_C02.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_21_C02_A029 3', mRNA sequence
Length = 876
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / -2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 356 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 177
Query: 261 LY 256
LY
Sbjct: 176 LY 171
>gb|DR119157.1|DR119157 RTMG1_21_C02.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_21_C02_A029 5', mRNA sequence
Length = 814
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / -3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 734 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 555
Query: 261 LY 256
LY
Sbjct: 554 LY 549
>gb|DR165772.1|DR165772 RTPHOS1_7_F02.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_7_F02_A029 3', mRNA sequence
Length = 864
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 90 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 269
Query: 261 LY 256
LY
Sbjct: 270 LY 275
>gb|DR165853.1|DR165853 RTPHOS1_7_F02.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_7_F02_A029 5', mRNA sequence
Length = 890
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 448 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 627
Query: 261 LY 256
LY
Sbjct: 628 LY 633
>gb|DR385328.1|DR385328 RTHG1_8_B04.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_B04_A029 3', mRNA sequence
Length = 812
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 37 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 216
Query: 261 LY 256
LY
Sbjct: 217 LY 222
>gb|DR386244.1|DR386244 RTHG1_13_G10.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_G10_A029 5', mRNA sequence
Length = 793
Score = 140 bits (301), Expect = 5e-033
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 473 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 652
Query: 261 LY 256
LY
Sbjct: 653 LY 658
>gb|CF663717.1|CF663717 RTCNT1_4_E08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_4_E08_A029 5', mRNA sequence
Length = 784
Score = 140 bits (300), Expect = 6e-033
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 559 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 738
Query: 261 LY 256
LY
Sbjct: 739 LY 744
>gb|BX784188.1|BX784188 BX784188 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 130D05 similar to ADP,ATP carrier protein,
mRNA sequence
Length = 475
Score = 140 bits (300), Expect = 6e-033
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY KTLKSDGIAGLYRGFNISCVGIIVYRG
Sbjct: 207 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYXKTLKSDGIAGLYRGFNISCVGIIVYRG 386
Query: 261 LY 256
LY
Sbjct: 387 LY 392
>gb|CO198151.1|CO198151 GEO1_11_D06.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_11_D06_A029 5', mRNA sequence
Length = 762
Score = 140 bits (300), Expect = 6e-033
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / -3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 742 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 563
Query: 261 LY 256
LY
Sbjct: 562 LY 557
>gb|CO365340.1|CO365340 RTK1_25_C10.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_25_C10_A029 3', mRNA sequence
Length = 858
Score = 140 bits (300), Expect = 6e-033
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 82 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 261
Query: 261 LY 256
LY
Sbjct: 262 LY 267
>gb|CO370549.1|CO370549 RTK1_68_D04.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_68_D04_A029 5', mRNA sequence
Length = 746
Score = 140 bits (300), Expect = 6e-033
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / -2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 745 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 566
Query: 261 LY 256
LY
Sbjct: 565 LY 560
>gb|DR049974.1|DR049974 RTBOR1_20_A01.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_20_A01_A029 5', mRNA sequence
Length = 778
Score = 140 bits (300), Expect = 6e-033
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 39 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 218
Query: 261 LY 256
LY
Sbjct: 219 LY 224
>gb|DR050236.1|DR050236 RTBOR1_22_D10.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_22_D10_A029 3', mRNA sequence
Length = 861
Score = 140 bits (300), Expect = 6e-033
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 84 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 263
Query: 261 LY 256
LY
Sbjct: 264 LY 269
>gb|DR050316.1|DR050316 RTBOR1_22_D10.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_22_D10_A029 5', mRNA sequence
Length = 790
Score = 140 bits (300), Expect = 6e-033
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 279 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 458
Query: 261 LY 256
LY
Sbjct: 459 LY 464
>gb|DR117464.1|DR117464 RTMG1_7_D06.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_D06_A029 3', mRNA sequence
Length = 907
Score = 140 bits (300), Expect = 6e-033
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 124 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 303
Query: 261 LY 256
LY
Sbjct: 304 LY 309
>gb|DR117547.1|DR117547 RTMG1_7_D06.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_D06_A029 5', mRNA sequence
Length = 837
Score = 140 bits (300), Expect = 6e-033
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 490 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 669
Query: 261 LY 256
LY
Sbjct: 670 LY 675
>gb|DR385595.1|DR385595 RTHG1_9_D06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_9_D06_A029 5', mRNA sequence
Length = 731
Score = 140 bits (300), Expect = 6e-033
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 386 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 565
Query: 261 LY 256
LY
Sbjct: 566 LY 571
>gb|DR387015.1|DR387015 RTHG1_18_G07.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_18_G07_A029 5', mRNA sequence
Length = 756
Score = 140 bits (300), Expect = 6e-033
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 180 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 359
Query: 261 LY 256
LY
Sbjct: 360 LY 365
>gb|DR744291.1|DR744291 RTCU1_21_B02.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_21_B02_A029 5', mRNA sequence
Length = 834
Score = 140 bits (300), Expect = 6e-033
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGL+DVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 97 YSLDYARTRLANDNKAAKKGGERQFNGLIDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 276
Query: 261 LY 256
LY
Sbjct: 277 LY 282
>gb|CX650615.1|CX650615 COLD1_46_H05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_46_H05_A029 5', mRNA sequence
Length = 295
Score = 139 bits (299), Expect = 9e-033
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 1 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYNKTLKTDGIAGLYRGFNISCVGIIVYRG 180
Query: 261 LY 256
LY
Sbjct: 181 LY 186
>gb|CF394023.1|CF394023 RTDS2_2_E04.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_2_E04_A021 5', mRNA sequence
Length = 724
Score = 139 bits (298), Expect = 1e-032
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGI+VYRG
Sbjct: 509 YSLDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIMVYRG 688
Query: 261 LY 256
LY
Sbjct: 689 LY 694
>gb|CO163180.1|CO163180 FLD1_40_B01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_40_B01_A029 3', mRNA sequence
Length = 858
Score = 138 bits (296), Expect = 2e-032
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YS DYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 82 YSXDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 261
Query: 261 LY 256
LY
Sbjct: 262 LY 267
>gb|DR015725.1|DR015725 STRS1_5_F07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_F07_A034 3', mRNA sequence
Length = 924
Score = 138 bits (296), Expect = 2e-032
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YS DYARTRLAND KAAK GGERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 141 YSXDYARTRLANDNKAAKKGGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 320
Query: 261 LY 256
LY
Sbjct: 321 LY 326
>gb|BQ634287.1|BQ634287 NXRV067_A07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_A07 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 800
Score = 138 bits (295), Expect = 3e-032
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND KAAK GERQFNGLVDVY+KTLK+DGIAGLYRGFNISCVGIIVYRG
Sbjct: 514 YSLDYARTRLANDNKAAKXXGERQFNGLVDVYKKTLKTDGIAGLYRGFNISCVGIIVYRG 693
Query: 261 LY 256
LY
Sbjct: 694 LY 699
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 289,302,802
Number of Sequences: 355925
Number of extensions: 4512530
Number of successful extensions: 82256
Number of sequences better than 1.0e-020: 155
length of database: 72,425,745
effective HSP length: 50
effective length of database: 54,629,495
effective search space used: 5626837985
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)