TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.536
(819 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO161923.1|CO161923 FLD1_32_B12.b1_A029 Root flooded Pin... 124 1e-046
gb|DR388986.1|DR388986 RTHG1_31_E09.g1_A029 Roots plus adde... 125 1e-033
gb|BX254307.1|BX254307 BX254307 Pinus pinaster differenciat... 124 2e-033
gb|BX254353.1|BX254353 BX254353 Pinus pinaster differenciat... 124 2e-033
gb|BX255312.1|BX255312 BX255312 Pinus pinaster differenciat... 124 3e-033
gb|DT630651.1|DT630651 EST1155063 Subtracted pine embryo li... 124 5e-033
gb|DN626435.1|DN626435 EST977251 Subtracted pine embryo lib... 124 5e-033
gb|DR165898.1|DR165898 RTPHOS1_8_B08.b1_A029 Roots minus ph... 124 5e-033
gb|DR165976.1|DR165976 RTPHOS1_8_B08.g1_A029 Roots minus ph... 124 5e-033
gb|DN633552.1|DN633552 EST984368 Subtracted pine embryo lib... 124 5e-033
gb|DR021265.1|DR021265 STRS1_43_B01.g1_A034 Shoot tip pitch... 124 5e-033
gb|DR387196.1|DR387196 RTHG1_20_D04.b1_A029 Roots plus adde... 124 5e-033
gb|DR019896.1|DR019896 STRS1_33_E09.b1_A034 Shoot tip pitch... 124 5e-033
gb|DR181034.1|DR181034 RTMNUT1_36_H03.b1_A029 Roots minus m... 124 5e-033
gb|DR388907.1|DR388907 RTHG1_31_E09.b1_A029 Roots plus adde... 124 5e-033
gb|DR021192.1|DR021192 STRS1_43_B01.b1_A034 Shoot tip pitch... 124 5e-033
gb|DR181113.1|DR181113 RTMNUT1_36_H03.g1_A029 Roots minus m... 124 5e-033
gb|DN633423.1|DN633423 EST984239 Subtracted pine embryo lib... 124 5e-033
gb|DR386253.1|DR386253 RTHG1_13_H10.g1_A029 Roots plus adde... 124 5e-033
gb|CX652036.1|CX652036 COLD1_56_B09.g1_A029 Root cold Pinus... 124 5e-033
gb|DR019966.1|DR019966 STRS1_33_E09.g1_A034 Shoot tip pitch... 124 5e-033
gb|DR387267.1|DR387267 RTHG1_20_D04.g1_A029 Roots plus adde... 124 5e-033
gb|BQ634804.1|BQ634804 NXRV073_D07_F NXRV (Nsf Xylem Root w... 124 5e-033
gb|CX649915.1|CX649915 COLD1_42_G03.b1_A029 Root cold Pinus... 124 5e-033
gb|BQ700728.1|BQ700728 NXRV110_E05_F NXRV (Nsf Xylem Root w... 124 5e-033
gb|AI812651.1|AI812651 17E11 Pine Lambda Zap Xylem library ... 124 5e-033
gb|BQ701566.1|BQ701566 NXSI_111_B03_F NXSI (Nsf Xylem Side ... 124 5e-033
gb|DN631700.1|DN631700 EST982516 Subtracted pine embryo lib... 124 7e-033
gb|DN634116.1|DN634116 EST984932 Subtracted pine embryo lib... 123 7e-033
gb|DT629746.1|DT629746 EST1154158 Subtracted pine embryo li... 123 2e-032
gb|DN626815.1|DN626815 EST977631 Subtracted pine embryo lib... 123 2e-032
gb|DN628616.1|DN628616 EST979432 Subtracted pine embryo lib... 123 2e-032
gb|DN630591.1|DN630591 EST981407 Subtracted pine embryo lib... 123 2e-032
gb|DN629655.1|DN629655 EST980471 Subtracted pine embryo lib... 123 5e-032
gb|DN632854.1|DN632854 EST983670 Subtracted pine embryo lib... 122 1e-031
gb|BQ654463.1|BQ654463 NXRV080_F06_F NXRV (Nsf Xylem Root w... 120 3e-031
gb|CO161994.1|CO161994 FLD1_32_B12.g1_A029 Root flooded Pin... 120 5e-030
gb|AI725277.1|AI725277 1143 PtIFG2 Pinus taeda cDNA clone 9... 123 9e-030
gb|BE607171.1|BE607171 NXCI_037_G09_F NXCI (Nsf Xylem Compr... 126 2e-028
gb|CF400294.1|CF400294 RTWW1_4_D02.g1_A015 Well-watered lob... 124 6e-028
gb|BX682595.1|BX682595 BX682595 Pinus pinaster differenciat... 124 6e-028
gb|CV036080.1|CV036080 RTNACL1_44_C01.g1_A029 Roots plus ad... 124 6e-028
gb|CX651965.1|CX651965 COLD1_56_B09.b1_A029 Root cold Pinus... 124 6e-028
gb|DR023173.1|DR023173 STRS1_56_A03.b1_A034 Shoot tip pitch... 124 6e-028
gb|DR023251.1|DR023251 STRS1_56_A03.g1_A034 Shoot tip pitch... 124 6e-028
gb|DR387274.1|DR387274 RTHG1_20_E01.g1_A029 Roots plus adde... 124 6e-028
gb|CF473554.1|CF473554 RTWW2_3_B11.g1_A021 Well-watered lob... 120 1e-027
gb|BF060542.1|BF060542 NXCI_116_E03_F NXCI (Nsf Xylem Compr... 123 2e-027
gb|BF169650.1|BF169650 NXCI_125_G08_F NXCI (Nsf Xylem Compr... 123 2e-027
gb|BF610045.1|BF610045 NXSI_054_B03_F NXSI (Nsf Xylem Side ... 123 2e-027
gb|BG039105.1|BG039105 NXSI_092_G10_F NXSI (Nsf Xylem Side ... 123 2e-027
gb|BG040850.1|BG040850 NXSI_115_H11_F NXSI (Nsf Xylem Side ... 123 2e-027
gb|CO164680.1|CO164680 FLD1_49_C12.g1_A029 Root flooded Pin... 123 2e-027
gb|BF777498.1|BF777498 NXSI_069_C07_F NXSI (Nsf Xylem Side ... 121 6e-027
gb|BF778167.1|BF778167 NXSI_077_H08_F NXSI (Nsf Xylem Side ... 121 6e-027
gb|BG040810.1|BG040810 NXSI_115_D06_F NXSI (Nsf Xylem Side ... 121 6e-027
gb|BQ702891.1|BQ702891 NXSI_133_H09_F NXSI (Nsf Xylem Side ... 121 6e-027
gb|BX254381.1|BX254381 BX254381 Pinus pinaster differenciat... 120 2e-026
gb|AA739976.1|AA739976 741 PtIFG2 Pinus taeda cDNA clone 91... 118 6e-026
gb|BE643877.1|BE643877 NXCI_048_E01_F NXCI (Nsf Xylem Compr... 118 6e-026
gb|CO174470.1|CO174470 NDL1_44_E07.b1_A029 Needles control ... 117 8e-026
gb|BF220421.1|BF220421 NXCI_146_B01_F NXCI (Nsf Xylem Compr... 116 1e-025
gb|BF221055.1|BF221055 NXCI_162_G04_F NXCI (Nsf Xylem Compr... 116 1e-025
gb|BX255085.1|BX255085 BX255085 Pinus pinaster differenciat... 107 2e-025
gb|CD027973.1|CD027973 NXNV_142_H03_F Nsf Xylem Normal wood... 106 2e-025
gb|BF517233.1|BF517233 NXSI_012_A02_F NXSI (Nsf Xylem Side ... 109 4e-025
gb|BF517234.1|BF517234 NXSI_012_A01_F NXSI (Nsf Xylem Side ... 111 5e-024
gb|CO164603.1|CO164603 FLD1_49_C12.b1_A029 Root flooded Pin... 109 2e-023
gb|BF609609.1|BF609609 NXSI_047_B11_F NXSI (Nsf Xylem Side ... 102 3e-021
gb|BQ701479.1|BQ701479 NXSI_064_H05_F NXSI (Nsf Xylem Side ... 102 3e-021
>gb|CO161923.1|CO161923 FLD1_32_B12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_32_B12_A029 3', mRNA sequence
Length = 788
Score = 124 bits (266), Expect(2) = 1e-046
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 264 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 443
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 444 LSAVHKSLRVAKAGGKKKSK 503
Score = 92.7 bits (196), Expect(2) = 2e-029
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 496 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 317
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 316 FSFFVFVVASTTARSSPA 263
Score = 82.6 bits (174), Expect(2) = 1e-046
Identities = 30/44 (68%), Positives = 40/44 (90%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNV 603
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+
Sbjct: 79 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNL 210
Score = 57.0 bits (118), Expect(2) = 2e-029
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +1 / -1
Query: 607 L*RLLGSLVNCTLALPLPNCFTRKELFFLTICQIRSPGTV 726
L*RLLGSL+N TLAL LP C TRK+LFF TI PG V
Sbjct: 206 L*RLLGSLLN*TLALLLPFCLTRKQLFFFTISHNSCPGKV 87
>gb|DR388986.1|DR388986 RTHG1_31_E09.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_31_E09_A029 5', mRNA sequence
Length = 720
Score = 125 bits (268), Expect(2) = 1e-033
Identities = 50/79 (63%), Positives = 64/79 (81%)
Frame = -2 / +1
Query: 737 REMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVT 558
R+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+
Sbjct: 7 RKMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVS 186
Query: 557 IQPAAGKDSAVVLSTTKTK 501
I PA + V+ +T K
Sbjct: 187 ITPAGEDLAVVLATTKTKK 243
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +1
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 196 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 375
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 376 LSAVHKSLRVAKAGGKKKSK 435
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 428 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 249
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 248 FSFFVFVVASTTARSSPA 195
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 230 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 51
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 50 TISHNSCPGKV 18
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 93 AVAVLSHKETVVLLHDLP*QLPW*GCH 13
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 346 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 233
Score = 38.2 bits (77), Expect(2) = 1e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +2
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 287 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 427
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +2
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 11 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 103
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 157 NTCMSASCKDC*VLC*TEP*RCCCRS 80
>gb|BX254307.1|BX254307 BX254307 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP096E08 similar to 60S RIBOSOMAL PROTEIN
L28, mRNA sequence
Length = 678
Score = 124 bits (266), Expect(2) = 6e-032
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +1
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 238 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 417
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 418 LSAVHKSLRVAKAGGKKKSK 477
Score = 123 bits (263), Expect(2) = 2e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 52 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 231
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 232 TPAGEDLAVVLATTKTKK 285
Score = 92.7 bits (196), Expect(2) = 2e-024
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 470 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 291
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 290 FSFFVFVVASTTARSSPA 237
Score = 85.4 bits (180), Expect(2) = 2e-023
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 272 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 93
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 92 TISHNNCPGKV 60
Score = 43.7 bits (89), Expect(2) = 2e-023
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = +2 / -3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQPG QPWP CGT + G + CSAS S
Sbjct: 388 ADNSSRQPGL*QPWPFCGTLSSELIYGQNPQACSASLS 275
Score = 40.0 bits (81), Expect(2) = 2e-024
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E V+L H+LP Q+PW G H
Sbjct: 135 AVAVLSHEETVILLHDLP*QLPW*GCH 55
Score = 39.6 bits (80), Expect(2) = 2e-033
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = -3 / +2
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL TRL TI G+ * + L G LC LV R+
Sbjct: 329 KSSAKWPRLS*TRLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 469
Score = 33.1 bits (66), Expect(2) = 6e-032
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +2
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * R T S * ATA PR
Sbjct: 53 RWQPYQGSCYGRS*RRITVSS*DRTATAAPR 145
>gb|BX254353.1|BX254353 BX254353 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP097D02 similar to 60S RIBOSOMAL PROTEIN
L28, mRNA sequence
Length = 658
Score = 124 bits (266), Expect(2) = 6e-032
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +2
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 227 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 406
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 407 LSAVHKSLRVAKAGGKKKSK 466
Score = 123 bits (263), Expect(2) = 2e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 41 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 220
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 221 TPAGEDLAVVLATTKTKK 274
Score = 92.7 bits (196), Expect(2) = 2e-024
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 459 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 280
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 279 FSFFVFVVASTTARSSPA 226
Score = 85.4 bits (180), Expect(2) = 2e-023
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 261 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 82
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 81 TISHNNCPGKV 49
Score = 43.7 bits (89), Expect(2) = 2e-023
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = +2 / -3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQPG QPWP CGT + G + CSAS S
Sbjct: 377 ADNSSRQPGL*QPWPFCGTLSSELIYGQNPQACSASLS 264
Score = 40.0 bits (81), Expect(2) = 2e-024
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E V+L H+LP Q+PW G H
Sbjct: 124 AVAVLSHEETVILLHDLP*QLPW*GCH 44
Score = 39.6 bits (80), Expect(2) = 2e-033
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = -3 / +3
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL TRL TI G+ * + L G LC LV R+
Sbjct: 318 KSSAKWPRLS*TRLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 458
Score = 33.1 bits (66), Expect(2) = 6e-032
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +3
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * R T S * ATA PR
Sbjct: 42 RWQPYQGSCYGRS*RRITVSS*DRTATAAPR 134
>gb|BX255312.1|BX255312 BX255312 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP004C08 similar to 60S RIBOSOMAL PROTEIN
L28, mRNA sequence
Length = 575
Score = 124 bits (266), Expect(2) = 9e-033
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 231 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 410
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 411 LSAVHKSLRVAKAGGKKKSK 470
Score = 123 bits (263), Expect(2) = 3e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 45 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 224
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 225 TPAGEDLAVVLATTKTKK 278
Score = 92.7 bits (196), Expect(3) = 4e-030
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 463 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 284
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 283 FSFFVFVVASTTARSSPA 230
Score = 84.9 bits (179), Expect(2) = 2e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 265 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 86
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 85 TISHNSCPGKV 53
Score = 41.4 bits (84), Expect(2) = 2e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS QPG QPWP CGT + G + CSAS S
Sbjct: 381 ADNSSHQPGL*QPWPFCGTLSSELIYGQNPQACSASLS 268
Score = 40.5 bits (82), Expect(3) = 4e-030
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 128 AVAVLSHEETVVLLHDLP*QLPW*GCH 48
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL TRL TI G+ * + L G LC LV R+
Sbjct: 322 KSSAKWPRLS*TRLMRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 462
Score = 36.3 bits (73), Expect(3) = 4e-030
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2 / -3
Query: 578 LSQSTCRSVHCRGCWAPW*TAPWHCRCQT 664
L +TC S C+ C A *T PW C C++
Sbjct: 201 LDLNTCMSASCKDC*ALC*TEPWRCCCRS 115
Score = 35.9 bits (72), Expect(2) = 9e-033
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA PR
Sbjct: 46 RWQPYQGSCYGRS*RRTTVSS*DRTATAAPR 138
>gb|DT630651.1|DT630651 EST1155063 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PIMEB45, mRNA sequence
Length = 829
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 453 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 632
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 633 LSAVHKSLRVAKAGGKKKSK 692
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 267 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 446
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 447 TPAGEDLAVVLATTKTKK 500
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 685 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 506
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 505 FSFFVFVVASTTARSSPA 452
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 487 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 308
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 307 TISHNSCPGKV 275
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 350 AVAVLSHKETVVLLHDLP*QLPW*GCH 270
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 603 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 490
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 544 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 684
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 268 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 360
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 414 NTCMSASCKDC*VLC*TEP*RCCCRS 337
>gb|DN626435.1|DN626435 EST977251 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAA243, mRNA sequence
Length = 819
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 432 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 611
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 612 LSAVHKSLRVAKAGGKKKSK 671
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 246 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 425
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 426 TPAGEDLAVVLATTKTKK 479
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -3
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 664 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 485
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 484 FSFFVFVVASTTARSSPA 431
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -3
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 466 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 287
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 286 TISHNSCPGKV 254
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -2
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 329 AVAVLSHKETVVLLHDLP*QLPW*GCH 249
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 582 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 469
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 523 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 663
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 247 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 339
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -1
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 393 NTCMSASCKDC*VLC*TEP*RCCCRS 316
>gb|DR165898.1|DR165898 RTPHOS1_8_B08.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_8_B08_A029 3', mRNA sequence
Length = 816
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 276 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 455
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 456 LSAVHKSLRVAKAGGKKKSK 515
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 90 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 269
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 270 TPAGEDLAVVLATTKTKK 323
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -3
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 508 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 329
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 328 FSFFVFVVASTTARSSPA 275
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -3
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 310 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 131
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 130 TISHNSCPGKV 98
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -2
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 173 AVAVLSHKETVVLLHDLP*QLPW*GCH 93
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 426 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 313
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 367 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 507
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 91 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 183
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -1
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 237 NTCMSASCKDC*VLC*TEP*RCCCRS 160
>gb|DR165976.1|DR165976 RTPHOS1_8_B08.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_8_B08_A029 5', mRNA sequence
Length = 816
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +2
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 257 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 436
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 437 LSAVHKSLRVAKAGGKKKSK 496
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 71 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 250
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 251 TPAGEDLAVVLATTKTKK 304
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 489 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 310
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 309 FSFFVFVVASTTARSSPA 256
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 291 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 112
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 111 TISHNSCPGKV 79
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 154 AVAVLSHKETVVLLHDLP*QLPW*GCH 74
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 407 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 294
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +3
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 348 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 488
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +3
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 72 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 164
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 218 NTCMSASCKDC*VLC*TEP*RCCCRS 141
>gb|DN633552.1|DN633552 EST984368 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAD835, mRNA sequence
Length = 811
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 432 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 611
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 612 LSAVHKSLRVAKAGGKKKSK 671
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 246 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 425
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 426 TPAGEDLAVVLATTKTKK 479
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 664 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 485
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 484 FSFFVFVVASTTARSSPA 431
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 466 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 287
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 286 TISHNSCPGKV 254
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 329 AVAVLSHKETVVLLHDLP*QLPW*GCH 249
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 582 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 469
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 523 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 663
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 247 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 339
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 393 NTCMSASCKDC*VLC*TEP*RCCCRS 316
>gb|DR021265.1|DR021265 STRS1_43_B01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_43_B01_A034 5', mRNA sequence
Length = 810
Score = 124 bits (265), Expect(2) = 1e-032
Identities = 53/80 (66%), Positives = 68/80 (85%)
Frame = -2 / +2
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQ+ +NYYR DL K+AL R
Sbjct: 266 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQIDENYYRRDLKKAALAR 445
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 446 LSAVHKSLRVAKAGGKKKSK 505
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 80 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 259
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 260 TPAGEDLAVVLATTKTKK 313
Score = 90.0 bits (190), Expect(3) = 1e-028
Identities = 46/78 (58%), Positives = 47/78 (60%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S WF TALAILRNS TDLW AG+
Sbjct: 498 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSIWFMTALAILRNSFFRTDLWTESAGL 319
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 318 FSFFVFVVASTTARSSPA 265
Score = 84.9 bits (179), Expect(2) = 1e-021
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 300 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 121
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 120 TISHNSCPGKV 88
Score = 41.4 bits (84), Expect(3) = 1e-028
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3 / -3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRHFPS 740
AVA L H+E VVL H+LP Q+PW G H S
Sbjct: 163 AVAVLSHEETVVLLHDLP*QLPW*GCHLVS 74
Score = 38.6 bits (78), Expect(2) = 1e-021
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 416 ADNSSRQFGL*QPWPFCGTLSSELIYGQNPQACSASLS 303
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +3
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 357 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 497
Score = 35.9 bits (72), Expect(2) = 1e-032
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -3 / +3
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA PR
Sbjct: 81 RWQPYQGSCYGRS*RRTTVSS*DRTATAAPR 173
Score = 33.6 bits (67), Expect(3) = 1e-028
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T PW C C++
Sbjct: 227 NTCMSASCKDC*VLC*TEPWRCCCRS 150
>gb|DR387196.1|DR387196 RTHG1_20_D04.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_20_D04_A029 3', mRNA sequence
Length = 806
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 273 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 452
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 453 LSAVHKSLRVAKAGGKKKSK 512
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 87 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 266
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 267 TPAGEDLAVVLATTKTKK 320
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 505 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 326
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 325 FSFFVFVVASTTARSSPA 272
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 307 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 128
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 127 TISHNSCPGKV 95
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 170 AVAVLSHKETVVLLHDLP*QLPW*GCH 90
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 423 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 310
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 364 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 504
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 88 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 180
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 234 NTCMSASCKDC*VLC*TEP*RCCCRS 157
>gb|DR019896.1|DR019896 STRS1_33_E09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_33_E09_A034 3', mRNA sequence
Length = 802
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 276 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 455
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 456 LSAVHKSLRVAKAGGKKKSK 515
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 90 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 269
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 270 TPAGEDLAVVLATTKTKK 323
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 508 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 329
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 328 FSFFVFVVASTTARSSPA 275
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 310 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 131
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 130 TISHNSCPGKV 98
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 173 AVAVLSHKETVVLLHDLP*QLPW*GCH 93
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 426 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 313
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 367 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 507
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 91 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 183
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 237 NTCMSASCKDC*VLC*TEP*RCCCRS 160
>gb|DR181034.1|DR181034 RTMNUT1_36_H03.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_36_H03_A029 3', mRNA sequence
Length = 790
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 276 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 455
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 456 LSAVHKSLRVAKAGGKKKSK 515
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 90 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 269
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 270 TPAGEDLAVVLATTKTKK 323
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 508 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 329
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 328 FSFFVFVVASTTARSSPA 275
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 310 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 131
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 130 TISHNSCPGKV 98
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 173 AVAVLSHKETVVLLHDLP*QLPW*GCH 93
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 426 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 313
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 367 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 507
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 91 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 183
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 237 NTCMSASCKDC*VLC*TEP*RCCCRS 160
>gb|DR388907.1|DR388907 RTHG1_31_E09.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_31_E09_A029 3', mRNA sequence
Length = 784
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 228 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 407
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 408 LSAVHKSLRVAKAGGKKKSK 467
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 42 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 221
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 222 TPAGEDLAVVLATTKTKK 275
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 460 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 281
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 280 FSFFVFVVASTTARSSPA 227
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 262 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 83
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 82 TISHNSCPGKV 50
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 125 AVAVLSHKETVVLLHDLP*QLPW*GCH 45
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 378 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 265
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 319 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 459
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 43 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 135
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 189 NTCMSASCKDC*VLC*TEP*RCCCRS 112
>gb|DR021192.1|DR021192 STRS1_43_B01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_43_B01_A034 3', mRNA sequence
Length = 782
Score = 124 bits (265), Expect(2) = 1e-032
Identities = 53/80 (66%), Positives = 68/80 (85%)
Frame = -2 / +1
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQ+ +NYYR DL K+AL R
Sbjct: 259 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQIDENYYRRDLKKAALAR 438
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 439 LSAVHKSLRVAKAGGKKKSK 498
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 73 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 252
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 253 TPAGEDLAVVLATTKTKK 306
Score = 90.0 bits (190), Expect(3) = 1e-028
Identities = 46/78 (58%), Positives = 47/78 (60%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S WF TALAILRNS TDLW AG+
Sbjct: 491 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSIWFMTALAILRNSFFRTDLWTESAGL 312
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 311 FSFFVFVVASTTARSSPA 258
Score = 84.9 bits (179), Expect(2) = 1e-021
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 293 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 114
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 113 TISHNSCPGKV 81
Score = 41.4 bits (84), Expect(3) = 1e-028
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3 / -3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRHFPS 740
AVA L H+E VVL H+LP Q+PW G H S
Sbjct: 156 AVAVLSHEETVVLLHDLP*QLPW*GCHLVS 67
Score = 38.6 bits (78), Expect(2) = 1e-021
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 409 ADNSSRQFGL*QPWPFCGTLSSELIYGQNPQACSASLS 296
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +2
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 350 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 490
Score = 35.9 bits (72), Expect(2) = 1e-032
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -3 / +2
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA PR
Sbjct: 74 RWQPYQGSCYGRS*RRTTVSS*DRTATAAPR 166
Score = 33.6 bits (67), Expect(3) = 1e-028
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T PW C C++
Sbjct: 220 NTCMSASCKDC*VLC*TEPWRCCCRS 143
>gb|DR181113.1|DR181113 RTMNUT1_36_H03.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_36_H03_A029 5', mRNA sequence
Length = 779
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 258 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 437
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 438 LSAVHKSLRVAKAGGKKKSK 497
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 72 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 251
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 252 TPAGEDLAVVLATTKTKK 305
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 490 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 311
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 310 FSFFVFVVASTTARSSPA 257
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 292 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 113
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 112 TISHNSCPGKV 80
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 155 AVAVLSHKETVVLLHDLP*QLPW*GCH 75
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 408 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 295
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 349 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 489
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 73 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 165
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 219 NTCMSASCKDC*VLC*TEP*RCCCRS 142
>gb|DN633423.1|DN633423 EST984239 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAD538, mRNA sequence
Length = 753
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +2
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 371 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 550
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 551 LSAVHKSLRVAKAGGKKKSK 610
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 185 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 364
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 365 TPAGEDLAVVLATTKTKK 418
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 603 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 424
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 423 FSFFVFVVASTTARSSPA 370
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 405 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 226
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 225 TISHNSCPGKV 193
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 268 AVAVLSHKETVVLLHDLP*QLPW*GCH 188
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 521 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 408
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +3
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 462 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 602
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +3
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 186 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 278
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 332 NTCMSASCKDC*VLC*TEP*RCCCRS 255
>gb|DR386253.1|DR386253 RTHG1_13_H10.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_H10_A029 5', mRNA sequence
Length = 739
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / -3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 512 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 333
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 332 LSAVHKSLRVAKAGGKKKSK 273
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / -3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 698 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 519
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 518 TPAGEDLAVVLATTKTKK 465
Score = 92.7 bits (196), Expect(3) = 2e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / +1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 280 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 459
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 460 FSFFVFVVASTTARSSPA 513
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / +1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 478 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 657
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 658 TISHNSCPGKV 690
Score = 40.9 bits (83), Expect(3) = 2e-027
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3 / +3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRHFPS 740
AVA L H+E VVL H+LP Q+PW G H S
Sbjct: 615 AVAVLSHKETVVLLHDLP*QLPW*GCHLVS 704
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / +2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 362 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 475
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / -1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 421 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 281
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / -1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 697 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 605
Score = 26.7 bits (52), Expect(3) = 2e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / +2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 551 NTCMSASCKDC*VLC*TEP*RCCCRS 628
>gb|CX652036.1|CX652036 COLD1_56_B09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_B09_A029 5', mRNA sequence
Length = 730
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +1
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 340 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 519
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 520 LSAVHKSLRVAKAGGKKKSK 579
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 154 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 333
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 334 TPAGEDLAVVLATTKTKK 387
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -3
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 572 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 393
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 392 FSFFVFVVASTTARSSPA 339
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -3
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 374 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 195
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 194 TISHNSCPGKV 162
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -2
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 237 AVAVLSHKETVVLLHDLP*QLPW*GCH 157
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 490 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 377
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +2
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 431 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 571
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +2
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 155 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 247
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -1
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 301 NTCMSASCKDC*VLC*TEP*RCCCRS 224
>gb|DR019966.1|DR019966 STRS1_33_E09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_33_E09_A034 5', mRNA sequence
Length = 732
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +1
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 313 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 492
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 493 LSAVHKSLRVAKAGGKKKSK 552
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 127 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 306
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 307 TPAGEDLAVVLATTKTKK 360
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 545 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 366
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 365 FSFFVFVVASTTARSSPA 312
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 347 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 168
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 167 TISHNSCPGKV 135
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 210 AVAVLSHKETVVLLHDLP*QLPW*GCH 130
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 463 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 350
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +2
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 404 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 544
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +2
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 128 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 220
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 274 NTCMSASCKDC*VLC*TEP*RCCCRS 197
>gb|DR387267.1|DR387267 RTHG1_20_D04.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_20_D04_A029 5', mRNA sequence
Length = 730
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +2
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 251 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 430
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 431 LSAVHKSLRVAKAGGKKKSK 490
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 65 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 244
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 245 TPAGEDLAVVLATTKTKK 298
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 483 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 304
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 303 FSFFVFVVASTTARSSPA 250
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 285 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 106
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 105 TISHNSCPGKV 73
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 148 AVAVLSHKETVVLLHDLP*QLPW*GCH 68
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 401 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 288
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +3
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 342 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 482
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +3
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 66 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 158
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 212 NTCMSASCKDC*VLC*TEP*RCCCRS 135
>gb|BQ634804.1|BQ634804 NXRV073_D07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV073_D07 5' similar to Arabidopsis thaliana
sequence At2g19730 putative ribosomal protein L28 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 712
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +2
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 260 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 439
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 440 LSAVHKSLRVAKAGGKKKSK 499
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 74 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 253
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 254 TPAGEDLAVVLATTKTKK 307
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 492 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 313
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 312 FSFFVFVVASTTARSSPA 259
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 294 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 115
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 114 TISHNSCPGKV 82
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 157 AVAVLSHKETVVLLHDLP*QLPW*GCH 77
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 410 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 297
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +3
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 351 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 491
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +3
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 75 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 167
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 221 NTCMSASCKDC*VLC*TEP*RCCCRS 144
>gb|CX649915.1|CX649915 COLD1_42_G03.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_42_G03_A029 3', mRNA sequence
Length = 700
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 189 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 368
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 369 LSAVHKSLRVAKAGGKKKSK 428
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 3 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 182
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 183 TPAGEDLAVVLATTKTKK 236
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 421 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 242
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 241 FSFFVFVVASTTARSSPA 188
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 223 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 44
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 43 TISHNSCPGKV 11
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 86 AVAVLSHKETVVLLHDLP*QLPW*GCH 6
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 339 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 226
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 280 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 420
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 4 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 96
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 150 NTCMSASCKDC*VLC*TEP*RCCCRS 73
>gb|BQ700728.1|BQ700728 NXRV110_E05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV110_E05 5' similar to Arabidopsis thaliana
sequence At2g19730 putative ribosomal protein L28 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 655
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 276 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 455
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 456 LSAVHKSLRVAKAGGKKKSK 515
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 90 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 269
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 270 TPAGEDLAVVLATTKTKK 323
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 508 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 329
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 328 FSFFVFVVASTTARSSPA 275
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 310 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 131
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 130 TISHNSCPGKV 98
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 173 AVAVLSHKETVVLLHDLP*QLPW*GCH 93
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 426 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 313
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 367 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 507
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 91 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 183
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 237 NTCMSASCKDC*VLC*TEP*RCCCRS 160
>gb|AI812651.1|AI812651 17E11 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 586
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +2
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 257 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 436
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 437 LSAVHKSLRVAKAGGKKKSK 496
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 71 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 250
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 251 TPAGEDLAVVLATTKTKK 304
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 489 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 310
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 309 FSFFVFVVASTTARSSPA 256
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 291 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 112
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 111 TISHNSCPGKV 79
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 154 AVAVLSHKETVVLLHDLP*QLPW*GCH 74
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 407 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 294
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +3
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 348 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 488
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +3
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 72 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 164
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 218 NTCMSASCKDC*VLC*TEP*RCCCRS 141
>gb|BQ701566.1|BQ701566 NXSI_111_B03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_111_B03 5' similar to Arabidopsis thaliana
sequence At2g19730 putative ribosomal protein L28 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 544
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 276 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 455
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 456 LSAVHKSLRVAKAGGKKKSK 515
Score = 123 bits (263), Expect(2) = 5e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 90 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 269
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 270 TPAGEDLAVVLATTKTKK 323
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 508 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 329
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 328 FSFFVFVVASTTARSSPA 275
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -1
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 310 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 131
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 130 TISHNSCPGKV 98
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 173 AVAVLSHKETVVLLHDLP*QLPW*GCH 93
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -2
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 426 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 313
Score = 38.2 bits (77), Expect(2) = 5e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 367 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 507
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 91 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 183
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 237 NTCMSASCKDC*VLC*TEP*RCCCRS 160
>gb|DN631700.1|DN631700 EST982516 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACD79, mRNA sequence
Length = 581
Score = 124 bits (266), Expect(2) = 2e-031
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / -3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 387 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 208
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 207 LSAVHKSLRVAKAGGKKKSK 148
Score = 122 bits (262), Expect(2) = 7e-033
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / -3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 573 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANGKTVSI 394
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 393 TPAGEDLAVVLATTKTKK 340
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / +2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 155 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 334
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 335 FSFFVFVVASTTARSSPA 388
Score = 84.5 bits (178), Expect(2) = 1e-021
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / +2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 353 VVASTTARSSPAGVIETVLPFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 532
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 533 TISHNSCPGKV 565
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / +1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 490 AVAVLSHKETVVLLHDLP*QLPW*GCH 570
Score = 39.1 bits (79), Expect(2) = 1e-021
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / +3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 237 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 350
Score = 38.2 bits (77), Expect(2) = 7e-033
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / -1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 296 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 156
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / -1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 572 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 480
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / +3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 426 NTCMSASCKDC*VLC*TEP*RCCCRS 503
>gb|DN634116.1|DN634116 EST984932 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTADH17, mRNA sequence
Length = 501
Score = 123 bits (263), Expect(2) = 2e-032
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 93 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 272
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 273 TPAGEDLAVVLATTKTKK 326
Score = 117 bits (251), Expect(2) = 7e-033
Identities = 51/74 (68%), Positives = 63/74 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 279 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 458
Query: 365 LSSVYRSLQVAKSG 324
LS+V++SL+VAK+G
Sbjct: 459 LSAVHKSLRVAKAG 500
Score = 87.7 bits (185), Expect(3) = 7e-026
Identities = 45/74 (60%), Positives = 46/74 (62%)
Frame = +1 / -3
Query: 325 PDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGVFCFL 504
P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+F F
Sbjct: 499 PAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGLFSFF 320
Query: 505 VLVVERTTAESFPA 546
V VV TTA S PA
Sbjct: 319 VFVVASTTARSSPA 278
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -3
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 313 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 134
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 133 TISHNSCPGKV 101
Score = 43.2 bits (88), Expect(2) = 7e-033
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = -1 / +2
Query: 741 AKGNGDRSRGSDLADCEEEQLLPGEAVWQRQCQGAVHQGAQQPLQCTLLQV 589
A+ +G+ +R + + D EEEQLLP E Q+Q G+V Q Q LQ L+QV
Sbjct: 86 ARQDGNLTRAAVMGDREEEQLLPCETERQQQR*GSV*QRT*QSLQLALIQV 238
Score = 40.9 bits (83), Expect(3) = 7e-026
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -2
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 176 AVAVLSHKEAVVLLHDLP*QLPW*GCH 96
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 429 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 316
Score = 35.9 bits (72), Expect(2) = 2e-032
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALC 353
+SSA+WPRL T+L TI G+ * + L G LC
Sbjct: 370 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLC 471
Score = 26.7 bits (52), Expect(3) = 7e-026
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -1
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 240 NTCMSASCKDC*VLC*TEP*RCCCRS 163
>gb|DT629746.1|DT629746 EST1154158 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PIME013, mRNA sequence
Length = 821
Score = 123 bits (263), Expect(2) = 2e-032
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 266 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 445
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 446 TPAGEDLAVVLATTKTKK 499
Score = 121 bits (259), Expect(2) = 1e-030
Identities = 53/80 (66%), Positives = 67/80 (83%)
Frame = -2 / +2
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++K FRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 452 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKGFRKMAKAVINQVDENYYRRDLKKAALAR 631
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 632 LSAVHKSLRVAKAGGKKKSK 691
Score = 90.4 bits (191), Expect(3) = 2e-026
Identities = 46/78 (58%), Positives = 47/78 (60%)
Frame = +1 / -3
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRN TDLW AG+
Sbjct: 684 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNPFFRTDLWTESAGL 505
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 504 FSFFVFVVASTTARSSPA 451
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -3
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 486 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 307
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 306 TISHNSCPGKV 274
Score = 40.0 bits (81), Expect(3) = 2e-026
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -2
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 349 AVAVLSHKETVVLLHDLP*QLPW*GCH 269
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 602 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 489
Score = 36.3 bits (73), Expect(2) = 2e-032
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = -3 / +3
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+ SA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 543 KGSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 683
Score = 31.8 bits (63), Expect(2) = 1e-030
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +3
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 267 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 359
Score = 26.7 bits (52), Expect(3) = 2e-026
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -1
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 413 NTCMSASCKDC*VLC*TEP*RCCCRS 336
>gb|DN626815.1|DN626815 EST977631 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAA885, mRNA sequence
Length = 770
Score = 123 bits (263), Expect(2) = 2e-032
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 246 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 425
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 426 TPAGEDLAVVLATTKTKK 479
Score = 121 bits (259), Expect(2) = 1e-030
Identities = 53/80 (66%), Positives = 67/80 (83%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++K FRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 432 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKGFRKMAKAVINQVDENYYRRDLKKAALAR 611
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 612 LSAVHKSLRVAKAGGKKKSK 671
Score = 90.4 bits (191), Expect(3) = 2e-026
Identities = 46/78 (58%), Positives = 47/78 (60%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRN TDLW AG+
Sbjct: 664 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNPFFRTDLWTESAGL 485
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 484 FSFFVFVVASTTARSSPA 431
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 466 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 287
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 286 TISHNSCPGKV 254
Score = 40.0 bits (81), Expect(3) = 2e-026
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 329 AVAVLSHKETVVLLHDLP*QLPW*GCH 249
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 582 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 469
Score = 36.3 bits (73), Expect(2) = 2e-032
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+ SA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 523 KGSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 663
Score = 31.8 bits (63), Expect(2) = 1e-030
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 247 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 339
Score = 26.7 bits (52), Expect(3) = 2e-026
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 393 NTCMSASCKDC*VLC*TEP*RCCCRS 316
>gb|DN628616.1|DN628616 EST979432 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAB216, mRNA sequence
Length = 501
Score = 123 bits (263), Expect(2) = 2e-032
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 93 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 272
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 273 TPAGEDLAVVLATTKTKK 326
Score = 117 bits (251), Expect(2) = 2e-029
Identities = 51/74 (68%), Positives = 63/74 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 279 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 458
Query: 365 LSSVYRSLQVAKSG 324
LS+V++SL+VAK+G
Sbjct: 459 LSAVHKSLRVAKAG 500
Score = 87.7 bits (185), Expect(3) = 1e-025
Identities = 45/74 (60%), Positives = 46/74 (62%)
Frame = +1 / -3
Query: 325 PDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGVFCFL 504
P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+F F
Sbjct: 499 PAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGLFSFF 320
Query: 505 VLVVERTTAESFPA 546
V VV TTA S PA
Sbjct: 319 VFVVASTTARSSPA 278
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -3
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 313 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 134
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 133 TISHNSCPGKV 101
Score = 40.0 bits (81), Expect(3) = 1e-025
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -2
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 176 AVAVLSHKETVVLLHDLP*QLPW*GCH 96
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 429 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 316
Score = 35.9 bits (72), Expect(2) = 2e-032
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALC 353
+SSA+WPRL T+L TI G+ * + L G LC
Sbjct: 370 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLC 471
Score = 31.8 bits (63), Expect(2) = 2e-029
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 94 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 186
Score = 26.7 bits (52), Expect(3) = 1e-025
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -1
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 240 NTCMSASCKDC*VLC*TEP*RCCCRS 163
>gb|DN630591.1|DN630591 EST981407 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABW73, mRNA sequence
Length = 501
Score = 123 bits (263), Expect(2) = 2e-032
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 93 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 272
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 273 TPAGEDLAVVLATTKTKK 326
Score = 117 bits (251), Expect(2) = 2e-029
Identities = 51/74 (68%), Positives = 63/74 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 279 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 458
Query: 365 LSSVYRSLQVAKSG 324
LS+V++SL+VAK+G
Sbjct: 459 LSAVHKSLRVAKAG 500
Score = 87.7 bits (185), Expect(3) = 1e-025
Identities = 45/74 (60%), Positives = 46/74 (62%)
Frame = +1 / -3
Query: 325 PDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGVFCFL 504
P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+F F
Sbjct: 499 PAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGLFSFF 320
Query: 505 VLVVERTTAESFPA 546
V VV TTA S PA
Sbjct: 319 VFVVASTTARSSPA 278
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / -3
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 313 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 134
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 133 TISHNSCPGKV 101
Score = 40.0 bits (81), Expect(3) = 1e-025
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -2
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 176 AVAVLSHKETVVLLHDLP*QLPW*GCH 96
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 429 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 316
Score = 35.9 bits (72), Expect(2) = 2e-032
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALC 353
+SSA+WPRL T+L TI G+ * + L G LC
Sbjct: 370 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLC 471
Score = 31.8 bits (63), Expect(2) = 2e-029
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +1
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 94 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 186
Score = 26.7 bits (52), Expect(3) = 1e-025
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -1
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 240 NTCMSASCKDC*VLC*TEP*RCCCRS 163
>gb|DN629655.1|DN629655 EST980471 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABI26, mRNA sequence
Length = 607
Score = 123 bits (263), Expect(2) = 5e-032
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / -2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 414 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 235
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 234 TPAGEDLAVVLATTKTKK 181
Score = 117 bits (250), Expect(2) = 2e-029
Identities = 51/76 (67%), Positives = 64/76 (84%)
Frame = -2 / -2
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFR+MAKAV NQV +NYYR DL K+AL R
Sbjct: 228 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRRMAKAVINQVDENYYRRDLKKAALAR 49
Query: 365 LSSVYRSLQVAKSGVK 318
LS+V++SL+VAK+G K
Sbjct: 48 LSAVHKSLRVAKAGGK 1
Score = 87.7 bits (185), Expect(3) = 1e-025
Identities = 45/74 (60%), Positives = 46/74 (62%)
Frame = +1 / +2
Query: 325 PDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGVFCFL 504
P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+F F
Sbjct: 8 PAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGLFSFF 187
Query: 505 VLVVERTTAESFPA 546
V VV TTA S PA
Sbjct: 188 VFVVASTTARSSPA 229
Score = 84.9 bits (179), Expect(2) = 7e-022
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = +1 / +2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 194 VVASTTARSSPAGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 373
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 374 TISHNSCPGKV 406
Score = 40.0 bits (81), Expect(3) = 1e-025
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / +1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 331 AVAVLSHKETVVLLHDLP*QLPW*GCH 411
Score = 39.1 bits (79), Expect(2) = 7e-022
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / +3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 78 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 191
Score = 35.0 bits (70), Expect(2) = 5e-032
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -3 / -3
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALC 353
+SSA WPRL T+L TI G+ * + L G LC
Sbjct: 137 KSSAEWPRLS*TKLTRTIIGVT*RKQLLRGLVLC 36
Score = 31.8 bits (63), Expect(2) = 2e-029
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / -3
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 413 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 321
Score = 26.7 bits (52), Expect(3) = 1e-025
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / +3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 267 NTCMSASCKDC*VLC*TEP*RCCCRS 344
>gb|DN632854.1|DN632854 EST983670 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACW10, mRNA sequence
Length = 813
Score = 122 bits (262), Expect(2) = 6e-031
Identities = 53/80 (66%), Positives = 67/80 (83%)
Frame = -2 / -1
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 387 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 208
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+V K+G KKK++
Sbjct: 207 LSAVHKSLRVVKAGGKKKSK 148
Score = 120 bits (256), Expect(2) = 1e-031
Identities = 48/78 (61%), Positives = 62/78 (79%)
Frame = -2 / -1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSG AN KTV+I
Sbjct: 573 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGPANDKTVSI 394
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 393 TPAGEDLAVVLATTKTKK 340
Score = 90.9 bits (192), Expect(3) = 1e-026
Identities = 46/78 (58%), Positives = 47/78 (60%)
Frame = +1 / +2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P T RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 155 FFFPPAFTTRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 334
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 335 FSFFVFVVASTTARSSPA 388
Score = 83.1 bits (175), Expect(2) = 3e-021
Identities = 42/71 (59%), Positives = 45/71 (63%)
Frame = +1 / +2
Query: 514 VERTTAESFPAAGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFL 693
V +T AG I TV FA PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF
Sbjct: 353 VVASTTARSSPAGVIETVLSFAGPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFF 532
Query: 694 TICQIRSPGTV 726
TI PG V
Sbjct: 533 TISHNSCPGKV 565
Score = 40.0 bits (81), Expect(3) = 1e-026
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / +1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 490 AVAVLSHKETVVLLHDLP*QLPW*GCH 570
Score = 39.1 bits (79), Expect(2) = 3e-021
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2 / +3
Query: 395 ACNSCRQPGFSQPWPSCGTPCALQTCG*ASRVCSASWS 508
A NS RQ G QPWP CGT + G + CSAS S
Sbjct: 237 ADNSSRQLGL*QPWPFCGTLSSELIYGQNPQACSASLS 350
Score = 36.8 bits (74), Expect(2) = 1e-031
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / -2
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 296 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVW*RLVERK 156
Score = 31.8 bits (63), Expect(2) = 6e-031
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / -2
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 572 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 480
Score = 26.7 bits (52), Expect(3) = 1e-026
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / +3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 426 NTCMSASCKDC*VLC*TEP*RCCCRS 503
>gb|BQ654463.1|BQ654463 NXRV080_F06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV080_F06 5' similar to Arabidopsis thaliana
sequence At2g19730 putative ribosomal protein L28 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 506
Score = 120 bits (257), Expect(2) = 3e-031
Identities = 46/63 (73%), Positives = 57/63 (90%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 177 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 356
Query: 554 QPA 546
PA
Sbjct: 357 TPA 365
Score = 84.5 bits (178), Expect(2) = 4e-023
Identities = 40/60 (66%), Positives = 43/60 (71%)
Frame = +1 / -2
Query: 547 AGWIVTVFLFAKPEYL*ECTL*RLLGSLVNCTLALPLPNCFTRKELFFLTICQIRSPGTV 726
AG I TV FA+PEYL EC L*RLLGSL+N TLAL LP C TRK+LFF TI PG V
Sbjct: 364 AGVIETVLSFARPEYLYECKL*RLLGSLLN*TLALLLPFCLTRKQLFFFTISHNSCPGKV 185
Score = 43.7 bits (89), Expect(2) = 4e-023
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +1 / -2
Query: 409 SPTWFFTALAILRNSLRITDLWLSFAGVFCFLVLVVERTTAESFPA 546
S W TALAI+R D+W AG+F V VV TA PA
Sbjct: 499 SSXWCMTALAIMRXXXXRNDVWTESAGLFXXFVYVVASXTARCSPA 362
Score = 35.0 bits (70), Expect(2) = 3e-031
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -1 / +2
Query: 549 SCWKGLGCGPLYYQDQEAEHTREAQPQVCNAQGVPQDGQGCEKPGWRQL 403
+CW+ G + D+ E P + + P +GQGC P R L
Sbjct: 359 TCWRTSGSXACHNIDKXXEQACGFCPYIISXXXXPHNGQGCHTPXXRXL 505
>gb|CO161994.1|CO161994 FLD1_32_B12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_32_B12_A029 5', mRNA sequence
Length = 724
Score = 120 bits (257), Expect(2) = 5e-030
Identities = 52/80 (65%), Positives = 67/80 (83%)
Frame = -2 / +2
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFR MAKAV NQV +NYYR DL K+AL R
Sbjct: 191 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRTMAKAVINQVDENYYRRDLKKAALAR 370
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V+++L+VAK+G KKK++
Sbjct: 371 LSAVHKTLRVAKAGGKKKSK 430
Score = 103 bits (220), Expect(2) = 7e-027
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN AKV F++EPN + SYKYSGLAN KTV+I
Sbjct: 5 KMATLPGHLLWEIVKKNNCFLVRQNGNSRAKVHFSREPNRSLQLASYKYSGLANDKTVSI 184
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 185 TPAGEDLAVVLATTKTKK 238
Score = 91.8 bits (194), Expect(2) = 2e-024
Identities = 46/78 (58%), Positives = 49/78 (62%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT R+ T LSL RA RS ** S TWF TALAI+RNS TDLW AG+
Sbjct: 423 FFFPPAFATRRVLCTALSLARAAFFRSRR**FSSTWFMTALAIVRNSFFRTDLWTESAGL 244
Query: 493 FCFLVLVVERTTAESFPA 546
F F VLVV TTA S PA
Sbjct: 243 FSFFVLVVASTTARSSPA 190
Score = 40.9 bits (83), Expect(2) = 2e-024
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHNLPDQIPWNGRH 731
AVA L H+E VVL H+LP Q+PW G H
Sbjct: 88 AVAVLSHKETVVLLHDLP*QVPW*GGH 8
Score = 37.3 bits (75), Expect(2) = 7e-027
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +3
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 282 KSSAQWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKLCVWQRLVERK 422
Score = 30.9 bits (61), Expect(2) = 5e-030
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -3 / +3
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W P+QG GR * RTT S * ATA R
Sbjct: 6 RWPPYQGTCYGRS*RRTTVSL*DRTATAALR 98
>gb|AI725277.1|AI725277 1143 PtIFG2 Pinus taeda cDNA clone 9194r, mRNA sequence
Length = 753
Score = 123 bits (263), Expect(2) = 9e-030
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +2
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 161 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 340
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 341 TPAGEDLAVVLATTKTKK 394
Score = 27.2 bits (53), Expect(2) = 9e-030
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1 / +1
Query: 447 PQDGQGCEKPGWRQLLQA 394
PQ+G GC P R+LL A
Sbjct: 445 PQNGPGCXXPS*RELLSA 498
>gb|BE607171.1|BE607171 NXCI_037_G09_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_037_G09 5' similar to Arabidopsis
thaliana sequence At2g19730 putative ribosomal protein
L28 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 371
Score = 126 bits (269), Expect = 2e-028
Identities = 50/78 (64%), Positives = 64/78 (82%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 9 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 188
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K K
Sbjct: 189 TPAGEDLAVVLATTKKKK 242
>gb|CF400294.1|CF400294 RTWW1_4_D02.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_4_D02_A015 5', mRNA sequence
Length = 673
Score = 124 bits (266), Expect = 6e-028
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 144 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 323
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 324 LSAVHKSLRVAKAGGKKKSK 383
Score = 96.8 bits (205), Expect(2) = 4e-025
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = -2 / +3
Query: 689 KNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTT 510
KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I PA + V+ +T
Sbjct: 3 KNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSITPAGEDLAVVLATTK 182
Query: 509 KTK 501
K
Sbjct: 183 TKK 191
Score = 38.2 bits (77), Expect(2) = 4e-025
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 235 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 375
>gb|BX682595.1|BX682595 BX682595 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 118D08 similar to 60S RIBOSOMAL PROTEIN L28,
mRNA sequence
Length = 445
Score = 124 bits (266), Expect = 6e-028
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 123 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 302
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 303 LSAVHKSLRVAKAGGKKKSK 362
Score = 92.7 bits (196), Expect(2) = 4e-023
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 355 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 176
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 175 FSFFVFVVASTTARSSPA 122
Score = 83.1 bits (175), Expect(2) = 2e-021
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = -2 / +3
Query: 668 KQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTTKTK 501
+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I PA + V+ +T K
Sbjct: 3 RQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSITPAGEDLAVVLATTKTKK 170
Score = 39.6 bits (80), Expect(2) = 2e-021
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL TRL TI G+ * + L G LC LV R+
Sbjct: 214 KSSAKWPRLS*TRLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 354
Score = 35.4 bits (71), Expect(2) = 4e-023
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2 / -2
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C A *T PW C C++
Sbjct: 84 NTCMSASCKDC*ALC*TEPWRCCCRS 7
>gb|CV036080.1|CV036080 RTNACL1_44_C01.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_44_C01_A029 5', mRNA sequence
Length = 763
Score = 124 bits (266), Expect = 6e-028
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / -2
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 513 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 334
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 333 LSAVHKSLRVAKAGGKKKSK 274
Score = 96.8 bits (205), Expect(2) = 4e-025
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = -2 / -2
Query: 689 KNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTT 510
KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I PA + V+ +T
Sbjct: 654 KNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSITPAGEDLAVVLATTK 475
Query: 509 KTK 501
K
Sbjct: 474 TKK 466
Score = 92.7 bits (196), Expect(3) = 5e-022
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / +2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 281 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 460
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 461 FSFFVFVVASTTARSSPA 514
Score = 38.2 bits (77), Expect(2) = 4e-025
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / -3
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 422 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 282
Score = 26.7 bits (52), Expect(3) = 5e-022
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / +3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 552 NTCMSASCKDC*VLC*TEP*RCCCRS 629
Score = 22.6 bits (43), Expect(3) = 5e-022
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 651 AVAKLLHQEGVVLP 692
AVA L H+E VVLP
Sbjct: 616 AVAVLSHKETVVLP 657
>gb|CX651965.1|CX651965 COLD1_56_B09.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_B09_A029 3', mRNA sequence
Length = 690
Score = 124 bits (266), Expect = 6e-028
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +1
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 121 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 300
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 301 LSAVHKSLRVAKAGGKKKSK 360
Score = 83.1 bits (175), Expect(2) = 5e-021
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = -2 / +1
Query: 668 KQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTTKTK 501
+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I PA + V+ +T K
Sbjct: 1 RQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSITPAGEDLAVVLATTKTKK 168
Score = 38.2 bits (77), Expect(2) = 5e-021
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +2
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 212 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 352
>gb|DR023173.1|DR023173 STRS1_56_A03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_56_A03_A034 3', mRNA sequence
Length = 667
Score = 124 bits (266), Expect = 6e-028
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +2
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 152 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 331
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 332 LSAVHKSLRVAKAGGKKKSK 391
Score = 101 bits (215), Expect(2) = 2e-026
Identities = 42/66 (63%), Positives = 52/66 (78%)
Frame = -2 / +2
Query: 698 IVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVL 519
IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I PA + V+
Sbjct: 2 IVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSITPAGEDLAVVLA 181
Query: 518 STTKTK 501
+T K
Sbjct: 182 TTKTKK 199
Score = 92.7 bits (196), Expect(3) = 7e-022
Identities = 47/78 (60%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 313 FFLTPDLATWRLRYTELSLPRADLVRSGL**LSPTWFFTALAILRNSLRITDLWLSFAGV 492
FF P AT RL T LSL RA RS ** S TWF TALAILRNS TDLW AG+
Sbjct: 384 FFFPPAFATRRLLCTALSLARAAFFRSRR**FSSTWFMTALAILRNSFFRTDLWTESAGL 205
Query: 493 FCFLVLVVERTTAESFPA 546
F F V VV TTA S PA
Sbjct: 204 FSFFVFVVASTTARSSPA 151
Score = 38.2 bits (77), Expect(2) = 2e-026
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +3
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 243 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 383
Score = 26.7 bits (52), Expect(3) = 7e-022
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -3
Query: 587 STCRSVHCRGCWAPW*TAPWHCRCQT 664
+TC S C+ C *T P C C++
Sbjct: 113 NTCMSASCKDC*VLC*TEP*RCCCRS 36
Score = 22.1 bits (42), Expect(3) = 7e-022
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / -1
Query: 651 AVAKLLHQEGVVLPHN 698
AVA L H+E VVL H+
Sbjct: 49 AVAVLSHKETVVLLHD 2
>gb|DR023251.1|DR023251 STRS1_56_A03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_56_A03_A034 5', mRNA sequence
Length = 665
Score = 124 bits (266), Expect = 6e-028
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +3
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 135 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 314
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 315 LSAVHKSLRVAKAGGKKKSK 374
Score = 89.5 bits (189), Expect(2) = 6e-023
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = -2 / +3
Query: 677 FLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAAGKDSAVVLSTTKTK 501
FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I PA + V+ +T K
Sbjct: 6 FLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSITPAGEDLAVVLATTKTKK 182
Score = 38.2 bits (77), Expect(2) = 6e-023
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 454 RSSARWPRL*KTRLATTITGLI*PSRPLVG*ALCTAASRLPSLVSRR 314
+SSA+WPRL T+L TI G+ * + L G LC LV R+
Sbjct: 226 KSSAKWPRLS*TKLTRTIIGVT*RKQLLRGLVLCIKVCVWQRLVERK 366
>gb|DR387274.1|DR387274 RTHG1_20_E01.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_20_E01_A029 5', mRNA sequence
Length = 557
Score = 124 bits (266), Expect = 6e-028
Identities = 54/80 (67%), Positives = 68/80 (85%)
Frame = -2 / +1
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKMAKAV NQV +NYYR DL K+AL R
Sbjct: 31 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMAKAVINQVDENYYRRDLKKAALAR 210
Query: 365 LSSVYRSLQVAKSGVKKKNR 306
LS+V++SL+VAK+G KKK++
Sbjct: 211 LSAVHKSLRVAKAGGKKKSK 270
>gb|CF473554.1|CF473554 RTWW2_3_B11.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_3_B11_A021 5', mRNA sequence
Length = 763
Score = 120 bits (257), Expect(2) = 1e-027
Identities = 48/76 (63%), Positives = 61/76 (80%)
Frame = -2 / +3
Query: 728 ATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQP 549
AT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I P
Sbjct: 3 ATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSITP 182
Query: 548 AAGKDSAVVLSTTKTK 501
A + V+ +T K
Sbjct: 183 AGEDLAVVLATTKTKK 230
Score = 22.6 bits (43), Expect(2) = 1e-027
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3 / +1
Query: 454 RSSARWPRL 428
+SSA+WPRL
Sbjct: 274 KSSAKWPRL 300
>gb|BF060542.1|BF060542 NXCI_116_E03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_116_E03 5' similar to Arabidopsis
thaliana sequence At2g19730 putative ribosomal protein
L28 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 464
Score = 123 bits (263), Expect = 2e-027
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 79 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 258
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 259 TPAGEDLAVVLATTKTKK 312
Score = 91.3 bits (193), Expect(2) = 1e-021
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = -2 / +1
Query: 545 AGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKAVKNQVGDNYYRPDLTKSALGR 366
AG+D AVVL+TTKTKK N PA H+SV++KEFRKM V NQV +NYYR DL K+AL
Sbjct: 265 AGEDLAVVLATTKTKKLNKPADSVHRSVLKKEFRKMXXXVINQVDENYYRRDLKKAALAX 444
Query: 365 LSSVYR 348
+V++
Sbjct: 445 XXAVHK 462
Score = 31.8 bits (63), Expect(2) = 1e-021
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3 / +2
Query: 733 KWRPFQGI*SGRL*GRTTPSW*SSLATAMPR 641
+W+P+QG GR * RTT S * ATA R
Sbjct: 80 RWQPYQGSCYGRS*RRTTVSL*DRTATAALR 172
>gb|BF169650.1|BF169650 NXCI_125_G08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_125_G08 5' similar to Arabidopsis
thaliana sequence At2g19730 putative ribosomal protein
L28 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 404
Score = 123 bits (263), Expect = 2e-027
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +3
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 42 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 221
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 222 TPAGEDLAVVLATTKTKK 275
>gb|BF610045.1|BF610045 NXSI_054_B03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_054_B03 5' similar to Arabidopsis thaliana
sequence At2g19730 putative ribosomal protein L28 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 351
Score = 123 bits (263), Expect = 2e-027
Identities = 49/78 (62%), Positives = 63/78 (80%)
Frame = -2 / +1
Query: 734 EMATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTI 555
+MAT+PG L+W+IV+KNN FLV+Q GN +AKVQF++EPNNLYN+HSYKYSGLAN KTV+I
Sbjct: 79 KMATLPGQLLWEIVKKNNCFLVRQNGNSSAKVQFSREPNNLYNLHSYKYSGLANDKTVSI 258
Query: 554 QPAAGKDSAVVLSTTKTK 501
PA + V+ +T K
Sbjct: 259 TPAGEDLAVVLATTKTKK 312
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 471,571,405
Number of Sequences: 355925
Number of extensions: 7448028
Number of successful extensions: 66148
Number of sequences better than 1.0e-020: 95
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 11861881900
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)