TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.288
(1775 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR683828.1|DR683828 EST1073904 Normalized pine embryo li... 441 e-138
gb|DR049704.1|DR049704 RTBOR1_18_B06.g1_A029 Roots plus add... 428 e-119
gb|CF399849.1|CF399849 RTWW1_1_D05.g1_A015 Well-watered lob... 422 e-117
gb|CF475540.1|CF475540 RTWW2_12_A06.g1_A021 Well-watered lo... 412 e-114
gb|CF395791.1|CF395791 RTDS2_17_D04.g1_A021 Drought-stresse... 404 e-112
gb|DR688361.1|DR688361 EST1078445 Normalized pine embryo li... 381 e-112
gb|DR059216.1|DR059216 RTNIT1_16_A01.g1_A029 Roots minus ni... 385 e-106
gb|CF475079.1|CF475079 RTWW2_5_G11.g1_A021 Well-watered lob... 371 e-101
gb|DR694395.1|DR694395 EST1084487 Normalized pine embryo li... 364 e-100
gb|CX649743.1|CX649743 COLD1_41_E09.b1_A029 Root cold Pinus... 363 2e-099
gb|DR022608.1|DR022608 STRS1_52_E11.b1_A034 Shoot tip pitch... 355 6e-097
gb|DT638624.1|DT638624 EST1153555 Normalized pine embryo li... 313 2e-096
gb|DR022316.1|DR022316 STRS1_50_F11.b1_A034 Shoot tip pitch... 337 2e-091
gb|CF472897.1|CF472897 RTDS1_12_A05.g1_A015 Drought-stresse... 325 8e-088
gb|CF472908.1|CF472908 RTDS1_12_A06.g1_A015 Drought-stresse... 322 4e-087
gb|CX649825.1|CX649825 COLD1_41_E09.g1_A029 Root cold Pinus... 317 2e-085
gb|CO198652.1|CO198652 GEO1_15_A02.g1_A029 Root gravitropis... 247 2e-077
gb|DT634670.1|DT634670 EST1149601 Normalized pine embryo li... 102 2e-076
gb|CF472877.1|CF472877 RTDS1_12_A06.b1_A015 Drought-stresse... 251 1e-065
gb|CF472832.1|CF472832 RTDS1_12_A05.b1_A015 Drought-stresse... 248 1e-064
gb|DR685422.1|DR685422 EST1075499 Normalized pine embryo li... 122 1e-064
gb|BM134211.1|BM134211 NXLV_018_B02_F NXLV (Nsf Xylem Late ... 243 2e-063
gb|CF475415.1|CF475415 RTWW2_12_A06.b1_A021 Well-watered lo... 239 4e-062
gb|AW010860.1|AW010860 ST12C08 Pine TriplEx shoot tip libra... 218 2e-060
gb|BF609050.1|BF609050 NXSI_039_G11_F NXSI (Nsf Xylem Side ... 232 6e-060
gb|CF399777.1|CF399777 RTWW1_1_D05.b1_A015 Well-watered lob... 232 6e-060
gb|BQ634041.1|BQ634041 NXRV065_A08_F NXRV (Nsf Xylem Root w... 210 3e-053
gb|CF475000.1|CF475000 RTWW2_5_G11.b1_A021 Well-watered lob... 196 5e-049
gb|BQ697139.1|BQ697139 NXPV_050_A04_F NXPV (Nsf Xylem Plani... 149 9e-049
gb|BX784112.1|BX784112 BX784112 Pinus pinaster differenciat... 104 1e-042
gb|AW042634.1|AW042634 ST24B10 Pine TriplEx shoot tip libra... 104 2e-033
gb|BQ655120.1|BQ655120 NXRV090_E02_F NXRV (Nsf Xylem Root w... 144 2e-033
gb|BM493698.1|BM493698 NXLV_069_D04_F NXLV (Nsf Xylem Late ... 127 2e-028
>gb|DR683828.1|DR683828 EST1073904 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAL74 3' end, mRNA sequence
Length = 864
Score = 441 bits (957), Expect(3) = e-138
Identities = 179/249 (71%), Positives = 211/249 (84%)
Frame = +3 / +3
Query: 528 DVEGDHTLIAGDDLIHSDVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSAN 707
+ + D TLI DD+I S VILG +K+EAPVLFRGI H NP+NSLVLKVLSASPSAYSAN
Sbjct: 90 ETDSDDTLIVSDDVIDSKVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSAN 269
Query: 708 PKTKLASPPSLTGSAISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQKADSKTRYERA 887
PK L+ PP+L GS+ISLVSV+QARNNARVL+SGSLDLFSN+F KS V+K S + ++
Sbjct: 270 PKADLSRPPALIGSSISLVSVVQARNNARVLISGSLDLFSNKFFKSPVKKFGSSVEHAKS 449
Query: 888 GNEQFVAEISKWVFHERGHLKAVNVRHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWK 1067
GNEQFV+E+SKWVFHERGHLKAVNV+H KVGET EP MYRI D LEYSVEIYEW+G WK
Sbjct: 450 GNEQFVSELSKWVFHERGHLKAVNVQHRKVGETFEPAMYRITDHLEYSVEIYEWTGKDWK 629
Query: 1068 PYVADDVQLQFFMMSPYVLKTMSTDNKGLYSTTFKVPDVYGVFQFKVEYQRLGYTGLSFT 1247
PY+ADDVQ+QF+MMSPYVLKT+S DN GLYS +F+VPDVYGVFQFK+EYQR+GYT LS +
Sbjct: 630 PYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLSLS 809
Query: 1248 KQIPVRPYR 1274
KQI + ++
Sbjct: 810 KQISCKAFQ 836
Score = 308 bits (668), Expect(3) = 5e-089
Identities = 148/243 (60%), Positives = 166/243 (68%)
Frame = -2 / -3
Query: 1255 ICFVKDRPVYPSLWYSTLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSSA 1076
IC +++R V P+L YS LNWKTP*TSGT EY PLLS D VFRT*GLIM N +CTSSA
Sbjct: 817 ICLLRERLV*PTL*YSILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSA 638
Query: 1075 TYGFQLVPDHS*ISTEYSRSSLMRYMPGSLVSPTL*CLTLTAFRCPLSWKTHLLISATNC 896
GFQ P HS*ISTEYSR S++RY+ GS VSPTL C T TA R PLSWKTHLL S TNC
Sbjct: 637 M*GFQSFPVHS*ISTEYSR*SVIRYIAGSKVSPTLRC*TFTALR*PLSWKTHLLNSDTNC 458
Query: 895 SFPALSYLVLLSAF*TPDFRNRLLNRSSDPDNSTRALFLACITETNDIADPVSDGGDANL 716
S P + L F T D +N LLN+S DP+ TRALFLAC T+T +I DP+S GG
Sbjct: 457 SLPLFACSTELPNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKEIEDPISAGGRDRS 278
Query: 715 VFGLAEYADGEADRTFRTKLFDGLAMCPIPRNNTGASIFSDPSITSEWIRSSPAIKV*SP 536
G AEYA+GEAD TF T+LF G IPR +TGAS F P IT E I SS IKV S
Sbjct: 277 ALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKITLESITSSLTIKVSSL 98
Query: 535 STS 527
S S
Sbjct: 97 SVS 89
Score = 175 bits (376), Expect(2) = 4e-043
Identities = 80/166 (48%), Positives = 111/166 (66%)
Frame = -1 / -2
Query: 1256 NLLCKRQTSISQSLVLNFELENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHIIS 1077
NLL +R+T ++ L+LNF+LEN+IN+ N E I +++V QN+R HH KL LH+I
Sbjct: 818 NLLAQRETCVTNPLILNFKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVIC 639
Query: 1076 NIRLPACSGPFIDLNRVFQVIINAVHAWFIGLPNLVMPNINSL*MSPLMENPFAYLCHKL 897
N+RLP S PFI+ N VFQVI +++H+ F LPN M NI SL M+P MENP A HKL
Sbjct: 638 NVRLPILSSPFINFNGVFQVISDSIHSRFKSLPNFTMLNIYSLKMTPFMENPLA*FRHKL 459
Query: 896 LVSSSLISCFAISLLNTRLQEPVAKQIE*SR*QHPSIISCLHNRNQ 759
L+++ + L N ++ VAK I+ SR ++PSIISCLH+ +Q
Sbjct: 458 LIATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIISCLHD*HQ 321
Score = 144 bits (308), Expect = 3e-033
Identities = 77/169 (45%), Positives = 100/169 (59%)
Frame = +1 / +1
Query: 751 LYHWFRLCRQEIMLGCCYLDHSICLATGS*SLVFKRLIAKQDMRELETSNLWQR*ANGFS 930
L+ W + CRQEIMLG +LD I LAT + + K L + M+++ S+L *A+GFS
Sbjct: 313 LFPWCQSCRQEIMLGFLFLDPLIYLATSFSNPLLKSLAVQLSMQKVAMSSLCLN*ASGFS 492
Query: 931 MRGDI*RLLMLGITRLGRPMNQACTALMMTWNTLLRSMNGPEQAGSRMLLMMCSFNFS** 1110
M+G I RL M I +LGR +N C ++TWNT L+ MNG E+ GS L M C +F+**
Sbjct: 493 MKGVILRL*MFSIVKLGRLLNLLCIESLITWNTPLKFMNGLERIGSLTLQMTCKCSFT** 672
Query: 1111 ALTF*KLCRLTTRVCIQQPSKFQMFMEFSSSKLSTKDWDILVCLLQSRF 1257
L F*+ C +T I SKF FM FS+ KLS K V L SRF
Sbjct: 673 VLMF*RRCHMTITDYILFRSKFLTFMVFSNLKLSIKGLVTQVSL*ASRF 819
Score = 120 bits (256), Expect = 4e-026
Identities = 80/207 (38%), Positives = 95/207 (45%)
Frame = -3 / -1
Query: 1218 FGTQL*TGXXXXXXXXXXXLNTNPCCQST*FSERKGSS*KIEAAHHQQHTASSLFRTIHR 1039
F TQ * G N C T SE K SS K A H Q AS+ F++IH+
Sbjct: 780 FDTQF*IGKHHKRQELGTKQNIIRYCHVTTSSEHKDSSCKTALARHLQCKASNPFQSIHK 601
Query: 1038 SQQSIPGHH*CGTCLVHWSPQPCDA*H*QPLDVPSHGKPICLSLPQIARFQLSHILFCYQ 859
Q+SIPG * T V SPQ DA H QP D P HGKP CL Q A H Q
Sbjct: 600 FQRSIPGDQ*FDT*QVQKSPQLYDAEHLQP*DDPFHGKPTCLIQTQTAHCHFLHAQLNCQ 421
Query: 858 PFEHQTSGTGC*TDRVIQITAPEHYFLPA*PKPMI*LTQ*AMEETLT*SLD*LNMLMERL 679
F T C* ++ IQ PEHYFLPA P * +E+ + D +M +
Sbjct: 420 TF*QGI*KTCC*INQGIQK*EPEHYFLPARLTPRK*KILSVLEDEIDQLWDLQSMQKVKQ 241
Query: 678 IEPSEPNCLMD*PCVQFLETIQEPQSF 598
I S P CL D Q L +EP++F
Sbjct: 240 IALSAPGCLQDLKNEQSLGKAREPRAF 160
Score = 104 bits (221), Expect(2) = 2e-027
Identities = 59/125 (47%), Positives = 81/125 (64%)
Frame = +2 / +2
Query: 881 ESWKRAICGRDKQMGFP*EGTSKGC*C*ASQGWGDQ*TRHVPH***PGILC*DL*MVRNK 1060
+ W+ A+C KQ+GFP*+G+S GC C AS WGD *T +V + * PGIL *+L*M
Sbjct: 443 KKWQ*AVCV*IKQVGFP*KGSS*GCKCSAS*SWGDF*TCYVSNH*SPGILR*NL*MDWKG 622
Query: 1061 LEAVCC**CAASIFHDEPLRSENYVD*QQGFVFNNLQSSRCLWSFPVQS*VPKTGIYWSV 1240
LEA+ C * A+++ HDE L SE+ V *Q +F + SS LW FP+ +*V K ++ S+
Sbjct: 623 LEALHCR*RASAVLHDESLCSEDVVT*Q*RIIFCFVPSS*RLWCFPI*N*VSKGWLHKSL 802
Query: 1241 FYKAD 1255
+AD
Sbjct: 803 SEQAD 817
Score = 52.8 bits (109), Expect(3) = e-138
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +3 / +1
Query: 438 LIRGIATECGVDFDEDPEAMVIDHMNYAVT 527
LIR IA +CGVDFDED A+VIDH +YAV+
Sbjct: 1 LIRDIAADCGVDFDEDLGALVIDHTSYAVS 90
Score = 39.6 bits (80), Expect(2) = 2e-027
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2 / +2
Query: 746 VSYIIGFGYAGKK*CSGAVIWITRSV*QPVPEVWCSK 856
+ Y +G AGKK*CSG+ WI +*Q V ++ C K
Sbjct: 308 IFYFLGVSRAGKK*CSGSYFWIP*FI*QQVFQIPC*K 418
Score = 38.6 bits (78), Expect(3) = e-138
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3 / +1
Query: 1251 QIPVRPYRHNEYERFI 1298
+ PVRP+RHNEYERFI
Sbjct: 814 RFPVRPFRHNEYERFI 861
Score = 30.4 bits (60), Expect(3) = 5e-089
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1 / -1
Query: 524 DGIVHMVNNHCLWILIKINPTLCCNATNE 438
+ I ++NN + IKINP + + TNE
Sbjct: 87 NSIASVINNQSTQVFIKINPAVSSDITNE 1
Score = 29.9 bits (59), Expect(3) = 5e-089
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2 / -2
Query: 1300 VMNLSYSLCL*GRTG 1256
+MNLSYSLCL G TG
Sbjct: 863 LMNLSYSLCLKGLTG 819
Score = 25.4 bits (49), Expect(2) = 4e-043
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3 / -3
Query: 522 RHSSYGQ*PLPLDPHQNQPHTLLQCHE* 439
+HS Q*P HQNQP + + HE*
Sbjct: 85 QHS*CDQ*PKHPGLHQNQPRSQQRYHE* 2
>gb|DR049704.1|DR049704 RTBOR1_18_B06.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_18_B06_A029 5', mRNA sequence
Length = 728
Score = 428 bits (928), Expect = e-119
Identities = 174/241 (72%), Positives = 206/241 (85%)
Frame = +3 / +1
Query: 387 IDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAGDD 566
+D+GHD+ILAAD+++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI DD
Sbjct: 4 VDSGHDLILAADTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDD 183
Query: 567 LIHSDVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPSLTG 746
+I S VILG +K+EAPVLFRGI H NP+NSLVLKVLSASPSAYSANPK L+ PP+L G
Sbjct: 184 VIDSKVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIG 363
Query: 747 SAISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQKADSKTRYERAGNEQFVAEISKWV 926
S+ISLVSV+QARNNARVL+SGSLDLFSN+F KS V+K S + ++GNEQFV+E+SKWV
Sbjct: 364 SSISLVSVVQARNNARVLISGSLDLFSNKFFKSPVKKFGSSVEHAKSGNEQFVSELSKWV 543
Query: 927 FHERGHLKAVNVRHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFM 1106
FHERGHLKAVNV+H KVGET EP MYRI D LEYSVEIYEW+G WKPY+ADDVQ+QF+M
Sbjct: 544 FHERGHLKAVNVQHRKVGETFEPAMYRITDHLEYSVEIYEWTGKDWKPYIADDVQVQFYM 723
Query: 1107 M 1109
M
Sbjct: 724 M 726
Score = 269 bits (582), Expect = 4e-071
Identities = 137/241 (56%), Positives = 152/241 (63%)
Frame = -2 / -1
Query: 1111 LIMKN*SCTSSATYGFQLVPDHS*ISTEYSRSSLMRYMPGSLVSPTL*CLTLTAFRCPLS 932
LIM N +CTSSA GFQ P HS*ISTEYSR S++RY+ GS VSPTL C T TA R PLS
Sbjct: 728 LIM*NCTCTSSAM*GFQSFPVHS*ISTEYSR*SVIRYIAGSKVSPTLRC*TFTALR*PLS 549
Query: 931 WKTHLLISATNCSFPALSYLVLLSAF*TPDFRNRLLNRSSDPDNSTRALFLACITETNDI 752
WKTHLL S TNCS P + L F T D +N LLN+S DP+ TRALFLAC T+T +I
Sbjct: 548 WKTHLLNSDTNCSLPLFACSTELPNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKEI 369
Query: 751 ADPVSDGGDANLVFGLAEYADGEADRTFRTKLFDGLAMCPIPRNNTGASIFSDPSITSEW 572
DP+S GG G AEYA+GEAD TF T+LF G IPR +TGAS F P IT E
Sbjct: 368 EDPISAGGRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKITLES 189
Query: 571 IRSSPAIKV*SPSTSVTA*FXXXXXXXXXXXXXSTPHSVAMPRMRSEAEESAARIMSCPA 392
I SS IKV*S S TA* STP S A+ RMRSE SAARI S P
Sbjct: 188 ITSSLTIKV*SLSVFETA*LV*SITKAPRSSSKSTPQSAAISRMRSELVVSAARIKSWPE 9
Query: 391 S 389
S
Sbjct: 8 S 6
Score = 130 bits (278), Expect(2) = 6e-045
Identities = 60/117 (51%), Positives = 78/117 (66%)
Frame = -1 / -3
Query: 1109 HHEKLKLHIISNIRLPACSGPFIDLNRVFQVIINAVHAWFIGLPNLVMPNINSL*MSPLM 930
HH KL LH+I N+RLP S PFI+ N VFQVI +++H+ F LPN M NI SL M+P M
Sbjct: 726 HHVKLHLHVICNVRLPILSSPFINFNGVFQVISDSIHSRFKSLPNFTMLNIYSLKMTPFM 547
Query: 929 ENPFAYLCHKLLVSSSLISCFAISLLNTRLQEPVAKQIE*SR*QHPSIISCLHNRNQ 759
ENP A HKLL+++ + L N ++ VAK I+ SR ++PSIISCLHN +Q
Sbjct: 546 ENPLA*FRHKLLIATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIISCLHN*HQ 376
Score = 114 bits (243), Expect(2) = 1e-027
Identities = 56/120 (46%), Positives = 76/120 (63%)
Frame = +1 / +2
Query: 751 LYHWFRLCRQEIMLGCCYLDHSICLATGS*SLVFKRLIAKQDMRELETSNLWQR*ANGFS 930
L+ W +LCRQEIMLG +LD I LAT + + K L + M+++ S+L *A+GFS
Sbjct: 368 LFPWCQLCRQEIMLGFLFLDPLIYLATSFSNPLLKSLAVQLSMQKVAMSSLCLN*ASGFS 547
Query: 931 MRGDI*RLLMLGITRLGRPMNQACTALMMTWNTLLRSMNGPEQAGSRMLLMMCSFNFS** 1110
M+G I RL M I +LGR +N C ++TWNT L+ MNG E+ GS L M C +F+**
Sbjct: 548 MKGVILRL*MFSIVKLGRLLNLLCIESLITWNTPLKFMNGLERIGSLTLQMTCKCSFT** 727
Score = 107 bits (229), Expect(2) = 3e-030
Identities = 69/171 (40%), Positives = 84/171 (49%)
Frame = -3 / -2
Query: 1110 SS*KIEAAHHQQHTASSLFRTIHRSQQSIPGHH*CGTCLVHWSPQPCDA*H*QPLDVPSH 931
SS K A H Q AS+ F++IH+ Q+SIPG * T V SPQ DA H QP D P H
Sbjct: 727 SSCKTALARHLQCKASNPFQSIHKFQRSIPGDQ*FDT*QVQKSPQLYDAEHLQP*DDPFH 548
Query: 930 GKPICLSLPQIARFQLSHILFCYQPFEHQTSGTGC*TDRVIQITAPEHYFLPA*PKPMI* 751
GKP CL Q A H Q F T C* ++ IQ PEHYFLPA P *
Sbjct: 547 GKPTCLIQTQTAHCHFLHAQLNCQTF*QGI*KTCC*INQGIQK*EPEHYFLPAQLTPRK* 368
Query: 750 LTQ*AMEETLT*SLD*LNMLMERLIEPSEPNCLMD*PCVQFLETIQEPQSF 598
+E+ + D +M + I S P CL D Q L +EP++F
Sbjct: 367 KILSVLEDEIDQLWDLQSMQKVKQIALSAPGCLQDLKNEQSLGKAREPRAF 215
Score = 72.5 bits (152), Expect(2) = 6e-045
Identities = 34/97 (35%), Positives = 57/97 (58%)
Frame = -1 / -3
Query: 677 *NLQNQTV*WISHVSNSSKQYRSLNLFRP*YHIRMDKIVTSNQGVITFNICDGIVHMVNN 498
*+ Q+Q V I +SN S+++ SL LF ++ +D IVT NQ +IT + + I ++NN
Sbjct: 294 *HFQHQAVCRI*RMSNPSEKHGSLELFLSQNNLGIDYIVTHNQSMITVSFRNSIASVINN 115
Query: 497 HCLWILIKINPTLCCNATNEIRGRGICRQDHVMPSIN 387
+ IKINP + + TNEIR + ++ +M ++
Sbjct: 114 QSTQVFIKINPAVSSDITNEIRAGSVSSKNQIMAGVD 4
Score = 45.5 bits (93), Expect(2) = 3e-030
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = -3 / -2
Query: 564 RHQQSRCDHLQHL*RHSSYGQ*PLPLDPHQNQPHTLLQCHE*DQ 433
RH QS+ DH Q +HS Q*P HQNQP + + HE*DQ
Sbjct: 181 RHSQSKYDHCQFSKQHS*CDQ*PKHPGLHQNQPRSQQRYHE*DQ 50
Score = 34.1 bits (68), Expect(2) = 1e-027
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +1 / +2
Query: 433 LISFVALQQSVGLILMRIQRQWLLTI*TMPSQMLKVITP*LLVTILSI 576
LISFV + GLILM+ WLL M + L VI *L VT+ SI
Sbjct: 50 LISFVISLLTAGLILMKTWVLWLLITLAMLFRKLTVIIL*L*VTM*SI 193
>gb|CF399849.1|CF399849 RTWW1_1_D05.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_1_D05_A015 5', mRNA sequence
Length = 685
Score = 422 bits (915), Expect = e-117
Identities = 172/228 (75%), Positives = 198/228 (86%)
Frame = +3 / +2
Query: 570 IHSDVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPSLTGS 749
I S VILG +K+EAPVLFRGI H NP+NSLVLKVLSASPSAYSANPK L+ PP+L GS
Sbjct: 2 IDSKVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGS 181
Query: 750 AISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQKADSKTRYERAGNEQFVAEISKWVF 929
+ISLVSV+QARNNARVL+SGSLDLFSN+F KS V+K S + ++GNEQFV+E+SKWVF
Sbjct: 182 SISLVSVVQARNNARVLISGSLDLFSNKFFKSPVKKFGSSVEHAKSGNEQFVSELSKWVF 361
Query: 930 HERGHLKAVNVRHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFMM 1109
HERGHLKAVNV+H KVGET EP MYRI D LEYSVEIYEW+G WKPY+ADDVQ+QF+MM
Sbjct: 362 HERGHLKAVNVQHRKVGETFEPAMYRITDHLEYSVEIYEWTGKDWKPYIADDVQVQFYMM 541
Query: 1110 SPYVLKTMSTDNKGLYSTTFKVPDVYGVFQFKVEYQRLGYTGLSFTKQ 1253
SPYVLKT+S DN GLYS +F+VPDVYGVFQFK+EYQR+GYT LS +KQ
Sbjct: 542 SPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLSLSKQ 685
Score = 297 bits (642), Expect = 2e-079
Identities = 139/228 (60%), Positives = 157/228 (68%)
Frame = -2 / -2
Query: 1252 CFVKDRPVYPSLWYSTLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSSAT 1073
C +++R V P+L YS LNWKTP*TSGT EY PLLS D VFRT*GLIM N +CTSSA
Sbjct: 684 CLLRERLV*PTL*YSILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM 505
Query: 1072 YGFQLVPDHS*ISTEYSRSSLMRYMPGSLVSPTL*CLTLTAFRCPLSWKTHLLISATNCS 893
GFQ P HS*ISTEYSR S++RY+ GS VSPTL C T TA R PLSWKTHLL S TNCS
Sbjct: 504 *GFQSFPVHS*ISTEYSR*SVIRYIAGSKVSPTLRC*TFTALR*PLSWKTHLLNSDTNCS 325
Query: 892 FPALSYLVLLSAF*TPDFRNRLLNRSSDPDNSTRALFLACITETNDIADPVSDGGDANLV 713
P + L F T D +N LLN+S DP+ TRALFLAC T+T +I DP+S GG
Sbjct: 324 LPLFACSTELPNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKEIEDPISAGGRDRSA 145
Query: 712 FGLAEYADGEADRTFRTKLFDGLAMCPIPRNNTGASIFSDPSITSEWI 569
G AEYA+GEAD TF T+LF G IPR +TGAS F P IT E I
Sbjct: 144 LGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKITLESI 1
Score = 174 bits (375), Expect = 1e-042
Identities = 80/165 (48%), Positives = 110/165 (66%)
Frame = -1 / -1
Query: 1253 LLCKRQTSISQSLVLNFELENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHIISN 1074
LL +R+T ++ L+LNF+LEN+IN+ N E I +++V QN+R HH KL LH+I N
Sbjct: 685 LLAQRETCVTNPLILNFKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICN 506
Query: 1073 IRLPACSGPFIDLNRVFQVIINAVHAWFIGLPNLVMPNINSL*MSPLMENPFAYLCHKLL 894
+RLP S PFI+ N VFQVI +++H+ F LPN M NI SL M+P MENP A HKLL
Sbjct: 505 VRLPILSSPFINFNGVFQVISDSIHSRFKSLPNFTMLNIYSLKMTPFMENPLA*FRHKLL 326
Query: 893 VSSSLISCFAISLLNTRLQEPVAKQIE*SR*QHPSIISCLHNRNQ 759
+++ + L N ++ VAK I+ SR ++PSIISCLHN +Q
Sbjct: 325 IATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIISCLHN*HQ 191
Score = 143 bits (306), Expect = 5e-033
Identities = 73/156 (46%), Positives = 96/156 (61%)
Frame = +1 / +3
Query: 751 LYHWFRLCRQEIMLGCCYLDHSICLATGS*SLVFKRLIAKQDMRELETSNLWQR*ANGFS 930
L+ W +LCRQEIMLG +LD I LAT + + K L + M+++ S+L *A+GFS
Sbjct: 183 LFPWCQLCRQEIMLGFLFLDPLIYLATSFSNPLLKSLAVQLSMQKVAMSSLCLN*ASGFS 362
Query: 931 MRGDI*RLLMLGITRLGRPMNQACTALMMTWNTLLRSMNGPEQAGSRMLLMMCSFNFS** 1110
M+G I RL M I +LGR +N C ++TWNT L+ MNG E+ GS L M C +F+**
Sbjct: 363 MKGVILRL*MFSIVKLGRLLNLLCIESLITWNTPLKFMNGLERIGSLTLQMTCKCSFT** 542
Query: 1111 ALTF*KLCRLTTRVCIQQPSKFQMFMEFSSSKLSTK 1218
L F*+ C +T I SKF FM FS+ KLS K
Sbjct: 543 VLMF*RRCHMTITDYILFRSKFLTFMVFSNLKLSIK 650
Score = 120 bits (256), Expect = 4e-026
Identities = 80/207 (38%), Positives = 95/207 (45%)
Frame = -3 / -3
Query: 1218 FGTQL*TGXXXXXXXXXXXLNTNPCCQST*FSERKGSS*KIEAAHHQQHTASSLFRTIHR 1039
F TQ * G N C T SE K SS K A H Q AS+ F++IH+
Sbjct: 650 FDTQF*IGKHHKRQELGTKQNIIRYCHVTTSSEHKDSSCKTALARHLQCKASNPFQSIHK 471
Query: 1038 SQQSIPGHH*CGTCLVHWSPQPCDA*H*QPLDVPSHGKPICLSLPQIARFQLSHILFCYQ 859
Q+SIPG * T V SPQ DA H QP D P HGKP CL Q A H Q
Sbjct: 470 FQRSIPGDQ*FDT*QVQKSPQLYDAEHLQP*DDPFHGKPTCLIQTQTAHCHFLHAQLNCQ 291
Query: 858 PFEHQTSGTGC*TDRVIQITAPEHYFLPA*PKPMI*LTQ*AMEETLT*SLD*LNMLMERL 679
F T C* ++ IQ PEHYFLPA P * +E+ + D +M +
Sbjct: 290 TF*QGI*KTCC*INQGIQK*EPEHYFLPAQLTPRK*KILSVLEDEIDQLWDLQSMQKVKQ 111
Query: 678 IEPSEPNCLMD*PCVQFLETIQEPQSF 598
I S P CL D Q L +EP++F
Sbjct: 110 IALSAPGCLQDLKNEQSLGKAREPRAF 30
Score = 101 bits (215), Expect(2) = 2e-026
Identities = 58/124 (46%), Positives = 80/124 (64%)
Frame = +2 / +1
Query: 881 ESWKRAICGRDKQMGFP*EGTSKGC*C*ASQGWGDQ*TRHVPH***PGILC*DL*MVRNK 1060
+ W+ A+C KQ+GFP*+G+S GC C AS WGD *T +V + * PGIL *+L*M
Sbjct: 313 KKWQ*AVCV*IKQVGFP*KGSS*GCKCSAS*SWGDF*TCYVSNH*SPGILR*NL*MDWKG 492
Query: 1061 LEAVCC**CAASIFHDEPLRSENYVD*QQGFVFNNLQSSRCLWSFPVQS*VPKTGIYWSV 1240
LEA+ C * A+++ HDE L SE+ V *Q +F + SS LW FP+ +*V K ++ S+
Sbjct: 493 LEALHCR*RASAVLHDESLCSEDVVT*Q*RIIFCFVPSS*RLWCFPI*N*VSKGWLHKSL 672
Query: 1241 FYKA 1252
+A
Sbjct: 673 SEQA 684
Score = 39.6 bits (80), Expect(2) = 2e-026
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2 / +1
Query: 746 VSYIIGFGYAGKK*CSGAVIWITRSV*QPVPEVWCSK 856
+ Y +G AGKK*CSG+ WI +*Q V ++ C K
Sbjct: 178 IFYFLGVSCAGKK*CSGSYFWIP*FI*QQVFQIPC*K 288
>gb|CF475540.1|CF475540 RTWW2_12_A06.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_12_A06_A021 5', mRNA sequence
Length = 752
Score = 412 bits (895), Expect = e-114
Identities = 171/244 (70%), Positives = 205/244 (84%)
Frame = +3 / +1
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVL 380
SSHS FF +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D +A+L
Sbjct: 19 SSHSIFFKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAIL 198
Query: 381 EFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAG 560
+FID+GHD+ILAAD+++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI
Sbjct: 199 DFIDSGHDLILAADTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVS 378
Query: 561 DDLIHSDVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPSL 740
DD+I S VILG +K+EAPVLFRGI H NP+NSLVLKVLSASPSAYSANPK L+ PP+L
Sbjct: 379 DDVIDSKVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPAL 558
Query: 741 TGSAISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQKADSKTRYERAGNEQFVAEISK 920
GS+ISLVSV+QARNNARVL+SGSLDLFSN+F KS V+K S + ++GNEQFV+E+SK
Sbjct: 559 IGSSISLVSVVQARNNARVLISGSLDLFSNKFFKSPVKKFGSSVEHAKSGNEQFVSELSK 738
Query: 921 WVFH 932
WVFH
Sbjct: 739 WVFH 750
Score = 257 bits (556), Expect = 2e-067
Identities = 129/242 (53%), Positives = 145/242 (59%)
Frame = -2 / -1
Query: 934 SWKTHLLISATNCSFPALSYLVLLSAF*TPDFRNRLLNRSSDPDNSTRALFLACITETND 755
SWKTHLL S TNCS P + L F T D +N LLN+S DP+ TRALFLAC T+T +
Sbjct: 752 SWKTHLLNSDTNCSLPLFACSTELPNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKE 573
Query: 754 IADPVSDGGDANLVFGLAEYADGEADRTFRTKLFDGLAMCPIPRNNTGASIFSDPSITSE 575
I DP+S GG G AEYA+GEAD TF T+LF G IPR +TGAS F P IT E
Sbjct: 572 IEDPISAGGRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKITLE 393
Query: 574 WIRSSPAIKV*SPSTSVTA*FXXXXXXXXXXXXXSTPHSVAMPRMRSEAEESAARIMSCP 395
I SS IKV*S S TA* STP S A+ RMRSE SAARI S P
Sbjct: 392 SITSSLTIKV*SLSVFETA*LV*SITKAPRSSSKSTPQSAAISRMRSELVVSAARIKSWP 213
Query: 394 ASINSRTAFWSTDPPKRGVEGAKSTRPS*RYWP*RWSESLGSSARRKSRSNPRAWSEPKK 215
SI S+ A S +PP+ EGAK PS +YWP WS SLGS A KSRS PR+ S KK
Sbjct: 212 ESIKSKIADKSNEPPRLSTEGAKRMSPSYKYWPYLWSASLGSCASLKSRSKPRSVSVLKK 33
Query: 214 AE 209
E
Sbjct: 32 IE 27
Score = 79.9 bits (168), Expect(3) = 1e-028
Identities = 36/102 (35%), Positives = 61/102 (59%)
Frame = -1 / -3
Query: 677 *NLQNQTV*WISHVSNSSKQYRSLNLFRP*YHIRMDKIVTSNQGVITFNICDGIVHMVNN 498
*+ Q+Q V I +SN S+++ SL LF ++ +D IVT NQ +IT + + I ++NN
Sbjct: 495 *HFQHQAVCRI*RMSNPSEKHGSLELFLSQNNLGIDYIVTHNQSMITVSFRNSIASVINN 316
Query: 497 HCLWILIKINPTLCCNATNEIRGRGICRQDHVMPSINKFEDC 372
+ IKINP + + TNEIR + ++ +M ++K ++C
Sbjct: 315 QSTQVFIKINPAVSSDITNEIRAGSVSSKNQIMAGVDKVQNC 190
Score = 53.3 bits (110), Expect(3) = 1e-028
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = -1 / -3
Query: 932 MENPFAYLCHKLLVSSSLISCFAISLLNTRLQEPVAKQIE*SR*QHPSIISCLHNRNQ 759
MENP A HKLL+++ + L N ++ VAK I+ SR ++PSIISCLHN +Q
Sbjct: 750 MENPLA*FRHKLLIATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIISCLHN*HQ 577
Score = 32.7 bits (65), Expect(3) = 1e-028
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -1 / -3
Query: 284 RELGIVSEAEVEIEPARLERAEEGRVRRPHGQVV 183
RELGI+ E EVEIE A E EE +R G +V
Sbjct: 102 RELGIMCELEVEIETAICECLEEN*MR*HDG*IV 1
>gb|CF395791.1|CF395791 RTDS2_17_D04.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_17_D04_A021 5', mRNA sequence
Length = 757
Score = 404 bits (877), Expect = e-112
Identities = 168/241 (69%), Positives = 202/241 (83%)
Frame = +3 / +2
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVL 380
SSHS FF +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D +A+L
Sbjct: 35 SSHSIFFKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAIL 214
Query: 381 EFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAG 560
+FID+GHD+ILAAD+++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI
Sbjct: 215 DFIDSGHDLILAADTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVS 394
Query: 561 DDLIHSDVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPSL 740
DD+I S VILG +K+EAPVLFRGI H NP+NSLVLKVLSASPSAYSANPK L+ PP+L
Sbjct: 395 DDVIDSKVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPAL 574
Query: 741 TGSAISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQKADSKTRYERAGNEQFVAEISK 920
GS+ISLVSV+QARNNARVL+SGSLDLFSN+F KS V+K S + ++GNEQFV+E+SK
Sbjct: 575 IGSSISLVSVVQARNNARVLISGSLDLFSNKFFKSPVKKFGSSVEHAKSGNEQFVSELSK 754
Query: 921 W 923
W
Sbjct: 755 W 757
Score = 246 bits (531), Expect = 4e-064
Identities = 125/238 (52%), Positives = 141/238 (59%)
Frame = -2 / -2
Query: 922 HLLISATNCSFPALSYLVLLSAF*TPDFRNRLLNRSSDPDNSTRALFLACITETNDIADP 743
HLL S TNCS P + L F T D +N LLN+S DP+ TRALFLAC T+T +I DP
Sbjct: 756 HLLNSDTNCSLPLFACSTELPNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKEIEDP 577
Query: 742 VSDGGDANLVFGLAEYADGEADRTFRTKLFDGLAMCPIPRNNTGASIFSDPSITSEWIRS 563
+S GG G AEYA+GEAD TF T+LF G IPR +TGAS F P IT E I S
Sbjct: 576 ISAGGRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKITLESITS 397
Query: 562 SPAIKV*SPSTSVTA*FXXXXXXXXXXXXXSTPHSVAMPRMRSEAEESAARIMSCPASIN 383
S IKV*S S TA* STP S A+ RMRSE SAARI S P SI
Sbjct: 396 SLTIKV*SLSVFETA*LV*SITKAPRSSSKSTPQSAAISRMRSELVVSAARIKSWPESIK 217
Query: 382 SRTAFWSTDPPKRGVEGAKSTRPS*RYWP*RWSESLGSSARRKSRSNPRAWSEPKKAE 209
S+ A S +PP+ EGAK PS +YWP WS SLGS A KSRS PR+ S KK E
Sbjct: 216 SKIADKSNEPPRLSTEGAKRMSPSYKYWPYLWSASLGSCASLKSRSKPRSVSVLKKIE 43
Score = 79.9 bits (168), Expect(3) = 1e-027
Identities = 36/102 (35%), Positives = 61/102 (59%)
Frame = -1 / -1
Query: 677 *NLQNQTV*WISHVSNSSKQYRSLNLFRP*YHIRMDKIVTSNQGVITFNICDGIVHMVNN 498
*+ Q+Q V I +SN S+++ SL LF ++ +D IVT NQ +IT + + I ++NN
Sbjct: 511 *HFQHQAVCRI*RMSNPSEKHGSLELFLSQNNLGIDYIVTHNQSMITVSFRNSIASVINN 332
Query: 497 HCLWILIKINPTLCCNATNEIRGRGICRQDHVMPSINKFEDC 372
+ IKINP + + TNEIR + ++ +M ++K ++C
Sbjct: 331 QSTQVFIKINPAVSSDITNEIRAGSVSSKNQIMAGVDKVQNC 206
Score = 46.0 bits (94), Expect(3) = 1e-027
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = -1 / -1
Query: 923 PFAYLCHKLLVSSSLISCFAISLLNTRLQEPVAKQIE*SR*QHPSIISCLHNRNQ 759
P A HKLL+++ + L N ++ VAK I+ SR ++PSIISCLHN +Q
Sbjct: 757 PLA*FRHKLLIATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIISCLHN*HQ 593
Score = 36.3 bits (73), Expect(3) = 1e-027
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -1 / -1
Query: 284 RELGIVSEAEVEIEPARLERAEEGRVRRPHGQVVQEDE 171
RELGI+ E EVEIE A E EE +R G +V E E
Sbjct: 118 RELGIMCELEVEIETAICECLEEN*MR*LDG*IVHEHE 5
>gb|DR688361.1|DR688361 EST1078445 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC538 3' end, mRNA sequence
Length = 797
Score = 381 bits (827), Expect(3) = e-112
Identities = 159/231 (68%), Positives = 193/231 (83%)
Frame = +3 / +2
Query: 219 FGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVLEFIDAG 398
F +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D +A+L+FID+G
Sbjct: 2 FKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAILDFIDSG 181
Query: 399 HDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAGDDLIHS 578
HD+ILAAD+++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI DD+I S
Sbjct: 182 HDLILAADTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDS 361
Query: 579 DVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPSLTGSAIS 758
VILG +K+EAPVLFRGI H NP+NSLVLKVLSASPSAYSANPK L+ PP+L GS+IS
Sbjct: 362 KVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSIS 541
Query: 759 LVSVMQARNNARVLLSGSLDLFSNRFLKSGVQKADSKTRYERAGNEQFVAE 911
LVSV+QARNNARVL+SGSLDLFSN+F KS V+K S + ++GNEQFV++
Sbjct: 542 LVSVVQARNNARVLISGSLDLFSNKFFKSPVKKFGSSVEHAKSGNEQFVSD 694
Score = 236 bits (509), Expect(2) = 6e-064
Identities = 119/228 (52%), Positives = 135/228 (59%)
Frame = -2 / -3
Query: 910 SATNCSFPALSYLVLLSAF*TPDFRNRLLNRSSDPDNSTRALFLACITETNDIADPVSDG 731
S TNCS P + L F T D +N LLN+S DP+ TRALFLAC T+T +I DP+S G
Sbjct: 693 SDTNCSLPLFACSTELPNFLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKEIEDPISAG 514
Query: 730 GDANLVFGLAEYADGEADRTFRTKLFDGLAMCPIPRNNTGASIFSDPSITSEWIRSSPAI 551
G G AEYA+GEAD TF T+LF G IPR +TGAS F P IT E I SS I
Sbjct: 513 GRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKITLESITSSLTI 334
Query: 550 KV*SPSTSVTA*FXXXXXXXXXXXXXSTPHSVAMPRMRSEAEESAARIMSCPASINSRTA 371
KV*S S TA* STP S A+ RMRSE SAARI S P SI S+ A
Sbjct: 333 KV*SLSVFETA*LV*SITKAPRSSSKSTPQSAAISRMRSELVVSAARIKSWPESIKSKIA 154
Query: 370 FWSTDPPKRGVEGAKSTRPS*RYWP*RWSESLGSSARRKSRSNPRAWS 227
S +PP+ EGAK PS +YWP WS SLGS A KSRS PR+ S
Sbjct: 153 DKSNEPPRLSTEGAKRMSPSYKYWPYLWSASLGSCASLKSRSKPRSVS 10
Score = 83.1 bits (175), Expect(3) = 1e-025
Identities = 37/102 (36%), Positives = 62/102 (60%)
Frame = -1 / -2
Query: 677 *NLQNQTV*WISHVSNSSKQYRSLNLFRP*YHIRMDKIVTSNQGVITFNICDGIVHMVNN 498
*+ Q+Q V I +SN S+++ SL LF ++R+D IVT NQ +IT + + I ++NN
Sbjct: 460 *HFQHQAVCRI*RMSNPSEKHGSLELFLSQNNLRIDYIVTHNQSMITVSFRNSIASVINN 281
Query: 497 HCLWILIKINPTLCCNATNEIRGRGICRQDHVMPSINKFEDC 372
+ IKINP + + TNEIR + ++ +M ++K ++C
Sbjct: 280 QSTQVFIKINPAVSSDITNEIRAGSVSSKNQIMAGVDKVQNC 155
Score = 44.1 bits (90), Expect(3) = 1e-025
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = -1 / -2
Query: 938 PLMENPFAYLCHKLLVSSSLISCFAISLLNTRLQEPVAKQIE*SR*QHPSIISCLHNRNQ 759
P P + HKLL+++ + L N ++ VAK I+ SR ++PSIISCL+N +Q
Sbjct: 721 PFHGKPTCLIRHKLLIATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIISCLYN*HQ 542
Score = 36.3 bits (73), Expect(3) = e-112
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 912 ISKWVFHERGHLK 950
+SKWVFHERGHLK
Sbjct: 694 LSKWVFHERGHLK 732
Score = 30.4 bits (60), Expect(2) = 6e-064
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2 / -1
Query: 979 PTL*CLTLTAFRCPLSWKTHLL 914
P L + + R PLSWKTHLL
Sbjct: 761 PNFTMLNIYSLR*PLSWKTHLL 696
Score = 28.6 bits (56), Expect(3) = 1e-025
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / -2
Query: 284 RELGIVSEAEVEIEPARLERAE 219
RELGI+ E EVEIE A E E
Sbjct: 67 RELGIMCELEVEIETAICECLE 2
Score = 27.2 bits (53), Expect(3) = e-112
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 936 RGHLKAVNVRHHKVGET 986
+G AVNV+H KVGET
Sbjct: 717 KGSS*AVNVQHRKVGET 767
>gb|DR059216.1|DR059216 RTNIT1_16_A01.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_16_A01_A029 5', mRNA sequence
Length = 618
Score = 385 bits (834), Expect = e-106
Identities = 153/205 (74%), Positives = 178/205 (86%)
Frame = +3 / +2
Query: 726 SPPSLTGSAISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQKADSKTRYERAGNEQFV 905
S +L GS+ISLVSV+QARNNARVL+SGSLDLFSN+F KS V+K S + ++GNEQFV
Sbjct: 2 SSSALIGSSISLVSVVQARNNARVLISGSLDLFSNKFFKSPVKKFGSSVEHAKSGNEQFV 181
Query: 906 AEISKWVFHERGHLKAVNVRHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWKPYVADD 1085
+E+SKWVFHERGHLKAVNV+H KVGET EP MYRI D LEYSVEIYEW+G WKPY+ADD
Sbjct: 182 SELSKWVFHERGHLKAVNVQHRKVGETFEPAMYRITDHLEYSVEIYEWTGKDWKPYIADD 361
Query: 1086 VQLQFFMMSPYVLKTMSTDNKGLYSTTFKVPDVYGVFQFKVEYQRLGYTGLSFTKQIPVR 1265
VQ+QF+MMSPYVLKT+S DN GLYS +F+VPDVYGVFQFK+EYQR+GYT LS +KQIPVR
Sbjct: 362 VQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLSLSKQIPVR 541
Query: 1266 PYRHNEYERFITSAYPYYTASFSTM 1340
P+RHNEYERFI +AYPYY +FS M
Sbjct: 542 PFRHNEYERFIKAAYPYYGGAFSMM 616
Score = 275 bits (596), Expect = 5e-073
Identities = 129/201 (64%), Positives = 146/201 (72%)
Frame = -2 / -1
Query: 1339 IVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWYSTLNWKTP*TSGTLKVV 1160
I+EN *YG A +MNLSYSLCL G TGIC +++R V P+L YS LNWKTP*TSGT
Sbjct: 615 IMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*YSILNWKTP*TSGTWNET 436
Query: 1159 EYKPLLSVDIVFRT*GLIMKN*SCTSSATYGFQLVPDHS*ISTEYSRSSLMRYMPGSLVS 980
EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*ISTEYSR S++RY+ GS VS
Sbjct: 435 EYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*ISTEYSR*SVIRYIAGSKVS 256
Query: 979 PTL*CLTLTAFRCPLSWKTHLLISATNCSFPALSYLVLLSAF*TPDFRNRLLNRSSDPDN 800
PTL C T TA R PLSWKTHLL S TNCS P + L F T D +N LLN+S DP+
Sbjct: 255 PTLRC*TFTALR*PLSWKTHLLNSDTNCSLPLFACSTELPNFLTGDLKNLLLNKSRDPEI 76
Query: 799 STRALFLACITETNDIADPVS 737
TRALFLAC T+T +I DP+S
Sbjct: 75 RTRALFLACTTDTKEIEDPIS 13
Score = 189 bits (408), Expect = 4e-047
Identities = 86/187 (45%), Positives = 121/187 (64%)
Frame = -1 / -3
Query: 1319 VVWVR*CYESLILIMSVRTYWNLLCKRQTSISQSLVLNFELENSINIWNFEGC*IQTLVV 1140
++W+ E I ++ R Y NLL +R+T ++ L+LNF+LEN+IN+ N E I +++V
Sbjct: 595 IIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILNFKLENTINVRNLERNRI*SVIV 416
Query: 1139 SRHSFQNVRAHHEKLKLHIISNIRLPACSGPFIDLNRVFQVIINAVHAWFIGLPNLVMPN 960
QN+R HH KL LH+I N+RLP S PFI+ N VFQVI +++H+ F LPN M N
Sbjct: 415 M*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGVFQVISDSIHSRFKSLPNFTMLN 236
Query: 959 INSL*MSPLMENPFAYLCHKLLVSSSLISCFAISLLNTRLQEPVAKQIE*SR*QHPSIIS 780
I SL M+P MENP A HKLL+++ + L N ++ VAK I+ SR ++PSIIS
Sbjct: 235 IYSLKMTPFMENPLA*FRHKLLIATFCMLN*TAKLFNRGFEKLVAK*IKGSRNKNPSIIS 56
Query: 779 CLHNRNQ 759
CLHN +Q
Sbjct: 55 CLHN*HQ 35
Score = 151 bits (325), Expect = 1e-035
Identities = 84/194 (43%), Positives = 110/194 (56%)
Frame = +1 / +3
Query: 751 LYHWFRLCRQEIMLGCCYLDHSICLATGS*SLVFKRLIAKQDMRELETSNLWQR*ANGFS 930
L+ W +LCRQEIMLG +LD I LAT + + K L + M+++ S+L *A+GFS
Sbjct: 27 LFPWCQLCRQEIMLGFLFLDPLIYLATSFSNPLLKSLAVQLSMQKVAMSSLCLN*ASGFS 206
Query: 931 MRGDI*RLLMLGITRLGRPMNQACTALMMTWNTLLRSMNGPEQAGSRMLLMMCSFNFS** 1110
M+G I RL M I +LGR +N C ++TWNT L+ MNG E+ GS L M C +F+**
Sbjct: 207 MKGVILRL*MFSIVKLGRLLNLLCIESLITWNTPLKFMNGLERIGSLTLQMTCKCSFT** 386
Query: 1111 ALTF*KLCRLTTRVCIQQPSKFQMFMEFSSSKLSTKDWDILVCLLQSRFQYVLTDIMSMR 1290
L F*+ C +T I SKF FM FS+ KLS K V L SRF L+ +M+
Sbjct: 387 VLMF*RRCHMTITDYILFRSKFLTFMVFSNLKLSIKGLVTQVSL*ASRFL*GLSGTTNMK 566
Query: 1291 DS*HQRTHTTPPHF 1332
S H HF
Sbjct: 567 GSLKLPIHIMEVHF 608
Score = 118 bits (252), Expect(2) = 1e-031
Identities = 68/153 (44%), Positives = 97/153 (63%)
Frame = +2 / +1
Query: 881 ESWKRAICGRDKQMGFP*EGTSKGC*C*ASQGWGDQ*TRHVPH***PGILC*DL*MVRNK 1060
+ W+ A+C KQ+GFP*+G+S GC C AS WGD *T +V + * PGIL *+L*M
Sbjct: 157 KKWQ*AVCV*IKQVGFP*KGSS*GCKCSAS*SWGDF*TCYVSNH*SPGILR*NL*MDWKG 336
Query: 1061 LEAVCC**CAASIFHDEPLRSENYVD*QQGFVFNNLQSSRCLWSFPVQS*VPKTGIYWSV 1240
LEA+ C * A+++ HDE L SE+ V *Q +F + SS LW FP+ +*V K ++ S+
Sbjct: 337 LEALHCR*RASAVLHDESLCSEDVVT*Q*RIIFCFVPSS*RLWCFPI*N*VSKGWLHKSL 516
Query: 1241 FYKADSSTSLQT**V*EIHNISVPILHRLIFNN 1339
+ADS + Q +*++H + IL R IF++
Sbjct: 517 SEQADSCKAFQAQRI*KVH*SCLSILWRCIFHD 615
Score = 110 bits (234), Expect = 4e-023
Identities = 74/187 (39%), Positives = 85/187 (45%)
Frame = -3 / -2
Query: 1332 KMRRCSMGTLML*ISHTHYVCKDVLESAL*KTDQYIPVFGTQL*TGXXXXXXXXXXXLNT 1153
KM +M + * H K + ESA + D F TQ * G N
Sbjct: 608 KMHLHNMDRQL**TFHIRCA*KALQESACSERDLCNQPFDTQF*IGKHHKRQELGTKQNI 429
Query: 1152 NPCCQST*FSERKGSS*KIEAAHHQQHTASSLFRTIHRSQQSIPGHH*CGTCLVHWSPQP 973
C T SE K SS K A H Q AS+ F++IH+ Q+SIPG * T V SPQ
Sbjct: 428 IRYCHVTTSSEHKDSSCKTALARHLQCKASNPFQSIHKFQRSIPGDQ*FDT*QVQKSPQL 249
Query: 972 CDA*H*QPLDVPSHGKPICLSLPQIARFQLSHILFCYQPFEHQTSGTGC*TDRVIQITAP 793
DA H QP D P HGKP CL Q A H Q F T C* ++ IQ P
Sbjct: 248 YDAEHLQP*DDPFHGKPTCLIQTQTAHCHFLHAQLNCQTF*QGI*KTCC*INQGIQK*EP 69
Query: 792 EHYFLPA 772
EHYFLPA
Sbjct: 68 EHYFLPA 48
Score = 39.6 bits (80), Expect(2) = 1e-031
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2 / +1
Query: 746 VSYIIGFGYAGKK*CSGAVIWITRSV*QPVPEVWCSK 856
+ Y +G AGKK*CSG+ WI +*Q V ++ C K
Sbjct: 22 IFYFLGVSCAGKK*CSGSYFWIP*FI*QQVFQIPC*K 132
>gb|CF475079.1|CF475079 RTWW2_5_G11.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_5_G11_A021 5', mRNA sequence
Length = 783
Score = 371 bits (804), Expect = e-101
Identities = 155/215 (72%), Positives = 183/215 (85%)
Frame = +3 / +2
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVL 380
SSHS FF +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D +A+L
Sbjct: 83 SSHSIFFKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAIL 262
Query: 381 EFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAG 560
+FID+GHD+ILAAD+++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI
Sbjct: 263 DFIDSGHDLILAADTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVS 442
Query: 561 DDLIHSDVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPSL 740
DD+I S VILG +K+EAPVLFRGI H NP+NSLVLKVLSASPSAYSANPK L+ PP+L
Sbjct: 443 DDVIDSKVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPAL 622
Query: 741 TGSAISLVSVMQARNNARVLLSGSLDLFSNRFLKS 845
GS+ISLVSV+QARNNARVL+SGSLDLFSN+F KS
Sbjct: 623 IGSSISLVSVVQARNNARVLISGSLDLFSNKFFKS 727
Score = 227 bits (491), Expect = 1e-058
Identities = 116/219 (52%), Positives = 131/219 (59%)
Frame = -2 / -1
Query: 865 LSAF*TPDFRNRLLNRSSDPDNSTRALFLACITETNDIADPVSDGGDANLVFGLAEYADG 686
L F* D +N LLN+S DP+ TRALFLAC T+T +I DP+S GG G AEYA+G
Sbjct: 747 LPNF*PGDLKNLLLNKSRDPEIRTRALFLACTTDTKEIEDPISAGGRDRSALGFAEYAEG 568
Query: 685 EADRTFRTKLFDGLAMCPIPRNNTGASIFSDPSITSEWIRSSPAIKV*SPSTSVTA*FXX 506
EAD TF T+LF G IPR +TGAS F P IT E I SS IKV*S S TA*
Sbjct: 567 EADSTFSTRLFAGFKE*AIPRKSTGASSFFSPKITLESITSSLTIKV*SLSVFETA*LV* 388
Query: 505 XXXXXXXXXXXSTPHSVAMPRMRSEAEESAARIMSCPASINSRTAFWSTDPPKRGVEGAK 326
STP S A+ RMRSE SAARI S P SI S+ A S +PP+ EGAK
Sbjct: 387 SITKAPRSSSKSTPQSAAISRMRSELVVSAARIKSWPESIKSKIADKSNEPPRLSTEGAK 208
Query: 325 STRPS*RYWP*RWSESLGSSARRKSRSNPRAWSEPKKAE 209
PS +YWP WS SLGS A KSRS PR+ S KK E
Sbjct: 207 RMSPSYKYWPYLWSASLGSCASLKSRSKPRSVSVLKKIE 91
Score = 79.9 bits (168), Expect(3) = 7e-025
Identities = 36/102 (35%), Positives = 61/102 (59%)
Frame = -1 / -3
Query: 677 *NLQNQTV*WISHVSNSSKQYRSLNLFRP*YHIRMDKIVTSNQGVITFNICDGIVHMVNN 498
*+ Q+Q V I +SN S+++ SL LF ++ +D IVT NQ +IT + + I ++NN
Sbjct: 559 *HFQHQAVCRI*RMSNPSEKHGSLELFLSQNNLGIDYIVTHNQSMITVSFRNSIASVINN 380
Query: 497 HCLWILIKINPTLCCNATNEIRGRGICRQDHVMPSINKFEDC 372
+ IKINP + + TNEIR + ++ +M ++K ++C
Sbjct: 379 QSTQVFIKINPAVSSDITNEIRAGSVSSKNQIMAGVDKVQNC 254
Score = 36.8 bits (74), Expect(3) = 7e-025
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -1 / -3
Query: 857 LLNTRLQEPVAKQIE*SR*QHPSIISCLHNRNQ 759
LL ++ VAK I+ SR ++PSIISCLHN +Q
Sbjct: 739 LLTRGFEKLVAK*IKGSRNKNPSIISCLHN*HQ 641
Score = 36.3 bits (73), Expect(3) = 7e-025
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -1 / -3
Query: 284 RELGIVSEAEVEIEPARLERAEEGRVRRPHGQVVQEDE 171
RELGI+ E EVEIE A E EE +R G +V E E
Sbjct: 166 RELGIMCELEVEIETAICECLEEN*MR*LDG*IVHEHE 53
>gb|DR694395.1|DR694395 EST1084487 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEB89 3' end, mRNA sequence
Length = 850
Score = 364 bits (790), Expect = e-100
Identities = 154/219 (70%), Positives = 183/219 (83%)
Frame = +3 / +2
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVL 380
SSHS FF +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D +A+L
Sbjct: 170 SSHSIFFKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAIL 349
Query: 381 EFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAG 560
+FID+GHD+ILAA +++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI
Sbjct: 350 DFIDSGHDLILAAGTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVS 529
Query: 561 DDLIHSDVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPSL 740
DD+I S VILG +K+EA VLFRGI H NP+NSLVLKVLSASPSAYSANPK L+ PP+L
Sbjct: 530 DDVIDSKVILGEKKLEALVLFRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPAL 709
Query: 741 TGSAISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQK 857
GS+ISLVSV+ ARNNARVL+SGSLDLFSN+F KS V+K
Sbjct: 710 IGSSISLVSVVHARNNARVLISGSLDLFSNKFFKSPVKK 826
Score = 221 bits (478), Expect = 9e-057
Identities = 113/216 (52%), Positives = 128/216 (59%)
Frame = -2 / -2
Query: 856 F*TPDFRNRLLNRSSDPDNSTRALFLACITETNDIADPVSDGGDANLVFGLAEYADGEAD 677
F T D +N LLN+S DP+ TRALFLAC T+T +I DP+S GG G AEYA+GEAD
Sbjct: 825 FLTGDLKNLLLNKSRDPEIRTRALFLACTTDTKEIEDPISAGGRDRSALGFAEYAEGEAD 646
Query: 676 RTFRTKLFDGLAMCPIPRNNTGASIFSDPSITSEWIRSSPAIKV*SPSTSVTA*FXXXXX 497
TF T+LF G IPR +T AS F P IT E I SS IKV*S S TA*
Sbjct: 645 STFSTRLFAGFKE*AIPRKSTRASSFFSPKITLESITSSLTIKV*SLSVFETA*LV*SIT 466
Query: 496 XXXXXXXXSTPHSVAMPRMRSEAEESAARIMSCPASINSRTAFWSTDPPKRGVEGAKSTR 317
STP S A+ RMRSE AARI S P SI S+ A S +PP+ EGAK
Sbjct: 465 KAPRSSSKSTPQSAAISRMRSELVVPAARIKSWPESIKSKIADKSNEPPRLSTEGAKRMS 286
Query: 316 PS*RYWP*RWSESLGSSARRKSRSNPRAWSEPKKAE 209
PS +YWP WS SLGS A KSRS PR+ S KK E
Sbjct: 285 PSYKYWPYLWSASLGSCASLKSRSKPRSVSVLKKIE 178
Score = 79.0 bits (166), Expect(3) = 2e-024
Identities = 36/102 (35%), Positives = 60/102 (58%)
Frame = -1 / -1
Query: 677 *NLQNQTV*WISHVSNSSKQYRSLNLFRP*YHIRMDKIVTSNQGVITFNICDGIVHMVNN 498
*+ Q+Q V I +SN S+++ SL LF ++ +D IVT NQ +IT + + I ++NN
Sbjct: 646 *HFQHQAVCRI*RMSNPSEKHESLELFLSQNNLGIDYIVTHNQSMITVSFRNSIASVINN 467
Query: 497 HCLWILIKINPTLCCNATNEIRGRGICRQDHVMPSINKFEDC 372
+ IKINP + + TNEIR ++ +M ++K ++C
Sbjct: 466 QSTQVFIKINPAVSSDITNEIRAGSASSKNQIMAGVDKVQNC 341
Score = 36.3 bits (73), Expect(3) = 2e-024
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -1 / -1
Query: 284 RELGIVSEAEVEIEPARLERAEEGRVRRPHGQVVQEDE 171
RELGI+ E EVEIE A E EE +R G +V E E
Sbjct: 253 RELGIMCELEVEIETAICECLEEN*MR*LDG*IVHEHE 140
Score = 36.3 bits (73), Expect(3) = 2e-024
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = -1 / -1
Query: 857 LLNTRLQEPVAKQIE*SR*QHPSIISCLHNRNQ 759
L N ++ VAK I+ SR ++PSIISC+HN +Q
Sbjct: 826 LFNRGFEKLVAK*IKGSRNKNPSIISCVHN*HQ 728
>gb|CX649743.1|CX649743 COLD1_41_E09.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_41_E09_A029 3', mRNA sequence
Length = 805
Score = 363 bits (787), Expect = 2e-099
Identities = 152/210 (72%), Positives = 179/210 (85%)
Frame = +3 / -2
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVL 380
SSHS FF +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D +A+L
Sbjct: 630 SSHSIFFKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAIL 451
Query: 381 EFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAG 560
+FID+GHD+ILAAD+++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI
Sbjct: 450 DFIDSGHDLILAADTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVS 271
Query: 561 DDLIHSDVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPSL 740
DD+I S VILG +K+EAPVLFRGI H NP+NSLVLKVLSASPSAYSANPK L+ PP+L
Sbjct: 270 DDVIDSKVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPAL 91
Query: 741 TGSAISLVSVMQARNNARVLLSGSLDLFSN 830
GS+ISLVSV+QARNNARVL+SGSLDLFSN
Sbjct: 90 IGSSISLVSVVQARNNARVLISGSLDLFSN 1
Score = 220 bits (474), Expect = 3e-056
Identities = 111/207 (53%), Positives = 125/207 (60%)
Frame = -2 / +2
Query: 829 LLNRSSDPDNSTRALFLACITETNDIADPVSDGGDANLVFGLAEYADGEADRTFRTKLFD 650
LLN+S DP+ TRALFLAC T+T +I DP+S GG G AEYA+GEAD TF T+LF
Sbjct: 2 LLNKSRDPEIRTRALFLACTTDTKEIEDPISAGGRDRSALGFAEYAEGEADSTFSTRLFA 181
Query: 649 GLAMCPIPRNNTGASIFSDPSITSEWIRSSPAIKV*SPSTSVTA*FXXXXXXXXXXXXXS 470
G IPR +TGAS F P IT E I SS IKV*S S TA* S
Sbjct: 182 GFKE*AIPRKSTGASSFFSPKITLESITSSLTIKV*SLSVFETA*LV*SITKAPRSSSKS 361
Query: 469 TPHSVAMPRMRSEAEESAARIMSCPASINSRTAFWSTDPPKRGVEGAKSTRPS*RYWP*R 290
TP S A+ RMRSE SAARI S P SI S+ A S +PP+ EGAK PS +YWP
Sbjct: 362 TPQSAAISRMRSELVVSAARIKSWPESIKSKIADKSNEPPRLSTEGAKRMSPSYKYWPYL 541
Query: 289 WSESLGSSARRKSRSNPRAWSEPKKAE 209
WS SLGS A KSRS PR+ S KK E
Sbjct: 542 WSASLGSCASLKSRSKPRSVSVLKKIE 622
Score = 79.9 bits (168), Expect(3) = 3e-024
Identities = 36/102 (35%), Positives = 61/102 (59%)
Frame = -1 / +1
Query: 677 *NLQNQTV*WISHVSNSSKQYRSLNLFRP*YHIRMDKIVTSNQGVITFNICDGIVHMVNN 498
*+ Q+Q V I +SN S+++ SL LF ++ +D IVT NQ +IT + + I ++NN
Sbjct: 154 *HFQHQAVCRI*RMSNPSEKHGSLELFLSQNNLGIDYIVTHNQSMITVSFRNSIASVINN 333
Query: 497 HCLWILIKINPTLCCNATNEIRGRGICRQDHVMPSINKFEDC 372
+ IKINP + + TNEIR + ++ +M ++K ++C
Sbjct: 334 QSTQVFIKINPAVSSDITNEIRAGSVSSKNQIMAGVDKVQNC 459
Score = 36.3 bits (73), Expect(3) = 3e-024
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -1 / +1
Query: 284 RELGIVSEAEVEIEPARLERAEEGRVRRPHGQVVQEDE 171
RELGI+ E EVEIE A E EE +R G +V E E
Sbjct: 547 RELGIMCELEVEIETAICECLEEN*MR*LDG*IVHEHE 660
Score = 34.5 bits (69), Expect(3) = 3e-024
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -1 / +1
Query: 830 VAKQIE*SR*QHPSIISCLHNRNQ 759
VAK I+ SR ++PSIISCLHN +Q
Sbjct: 1 VAK*IKGSRNKNPSIISCLHN*HQ 72
>gb|DR022608.1|DR022608 STRS1_52_E11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_52_E11_A034 3', mRNA sequence
Length = 826
Score = 355 bits (769), Expect = 6e-097
Identities = 137/189 (72%), Positives = 160/189 (84%)
Frame = +3 / +3
Query: 819 LFSNRFLKSGVQKADSKTRYERAGNEQFVAEISKWVFHERGHLKAVNVRHHKVGETNEPG 998
LFSN+F KS V+K S + ++GNEQFV+E+SKWVFHERGHLKAVNV+H KVGET EP
Sbjct: 3 LFSNKFFKSPVKKFGSSVEHAKSGNEQFVSELSKWVFHERGHLKAVNVQHRKVGETFEPA 182
Query: 999 MYRINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSTDNKGLYSTTFKVP 1178
MYRI D LEYSVEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S DN GLYS +F+VP
Sbjct: 183 MYRITDHLEYSVEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVP 362
Query: 1179 DVYGVFQFKVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMGAFFVF 1358
DVYGVFQFK+EYQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FF+F
Sbjct: 363 DVYGVFQFKIEYQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIF 542
Query: 1359 SFVYLYHK* 1385
+LYHK*
Sbjct: 543 GLFFLYHK* 569
Score = 246 bits (532), Expect = 3e-064
Identities = 119/191 (62%), Positives = 133/191 (69%)
Frame = -2 / -1
Query: 1390 VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWY 1211
+LYL Y+ KK I+EN *YG A +MNLSYSLCL G TGIC +K+R V P+L Y
Sbjct: 574 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLKERLV*PTL*Y 395
Query: 1210 STLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSSATYGFQLVPDHS*IST 1031
S LNWKTP*TSGT EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 394 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 215
Query: 1030 EYSRSSLMRYMPGSLVSPTL*CLTLTAFRCPLSWKTHLLISATNCSFPALSYLVLLSAF* 851
EYSR S++RY+ GS VSPTL C T TA R PLSWKTHLL S TNCS P + L F
Sbjct: 214 EYSR*SVIRYIAGSKVSPTLRC*TFTALR*PLSWKTHLLNSDTNCSLPLFACSTELPNFL 35
Query: 850 TPDFRNRLLNR 818
T D +N LLN+
Sbjct: 34 TGDLKNLLLNK 2
Score = 170 bits (365), Expect = 3e-041
Identities = 78/188 (41%), Positives = 115/188 (61%)
Frame = -1 / -3
Query: 1385 LFVVQVHKREYEESTHC*K*GGVVWVR*CYESLILIMSVRTYWNLLCKRQTSISQSLVLN 1206
LF++ + + +E+ H K ++W+ E I ++ R Y NLL +R+T ++ L+LN
Sbjct: 569 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 390
Query: 1205 FELENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHIISNIRLPACSGPFIDLNRV 1026
F+LEN+IN+ N E I +++V QN+R HH KL LH+I N+RLP S PFI+ N V
Sbjct: 389 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 210
Query: 1025 FQVIINAVHAWFIGLPNLVMPNINSL*MSPLMENPFAYLCHKLLVSSSLISCFAISLLNT 846
FQVI +++H+ F LPN M NI SL M+P MENP A HKLL+++ + L N
Sbjct: 209 FQVISDSIHSRFKSLPNFTMLNIYSLKMTPFMENPLA*FRHKLLIATFCMLN*TAKLFNR 30
Query: 845 RLQEPVAK 822
++ VAK
Sbjct: 29 GFEKLVAK 6
Score = 124 bits (266), Expect = 2e-027
Identities = 71/157 (45%), Positives = 100/157 (63%)
Frame = +2 / +2
Query: 881 ESWKRAICGRDKQMGFP*EGTSKGC*C*ASQGWGDQ*TRHVPH***PGILC*DL*MVRNK 1060
+ W+ A+C KQ+GFP*+G+S GC C AS WGD *T +V + * PGIL *+L*M
Sbjct: 65 KKWQ*AVCV*IKQVGFP*KGSS*GCKCSAS*SWGDF*TCYVSNH*SPGILR*NL*MDWKG 244
Query: 1061 LEAVCC**CAASIFHDEPLRSENYVD*QQGFVFNNLQSSRCLWSFPVQS*VPKTGIYWSV 1240
LEA+ C * A+++ HDE L SE+ V *Q +F + SS LW FP+ +*V K ++ S+
Sbjct: 245 LEALHCR*RASAVLHDESLCSEDVVT*Q*RIIFCFVPSS*RLWCFPI*N*VSKGWLHKSL 424
Query: 1241 FYKADSSTSLQT**V*EIHNISVPILHRLIFNNGCFL 1351
F +ADS + Q +*++H + IL R IF++ FL
Sbjct: 425 FEQADSCKAFQAQRI*KVH*SCLSILWRCIFHDDRFL 535
Score = 120 bits (257), Expect = 3e-026
Identities = 71/172 (41%), Positives = 94/172 (54%)
Frame = +1 / +1
Query: 817 ICLATGS*SLVFKRLIAKQDMRELETSNLWQR*ANGFSMRGDI*RLLMLGITRLGRPMNQ 996
I LAT + + K L + M+++ S+L *A+GFSM+G I RL M I +LGR +N
Sbjct: 1 IYLATSFSNPLLKSLAVQLSMQKVAMSSLCLN*ASGFSMKGVILRL*MFSIVKLGRLLNL 180
Query: 997 ACTALMMTWNTLLRSMNGPEQAGSRMLLMMCSFNFS**ALTF*KLCRLTTRVCIQQPSKF 1176
C ++TWNT L+ MNG E+ GS L M C +F+** L F*+ C +T I SKF
Sbjct: 181 LCIESLITWNTPLKFMNGLERIGSLTLQMTCKCSFT**VLMF*RRCHMTITDYILFRSKF 360
Query: 1177 QMFMEFSSSKLSTKDWDILVCLLQSRFQYVLTDIMSMRDS*HQRTHTTPPHF 1332
FM FS+ KLS K V L SRF L+ +M+ S H HF
Sbjct: 361 LTFMVFSNLKLSIKGLVTQVSL*ASRFL*GLSGTTNMKGSLKLPIHIMEVHF 516
>gb|DT638624.1|DT638624 EST1153555 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHH42 3' end, mRNA sequence
Length = 860
Score = 313 bits (678), Expect(2) = 2e-096
Identities = 130/187 (69%), Positives = 155/187 (82%)
Frame = +3 / +2
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVL 380
SSHS FF +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D +A+L
Sbjct: 179 SSHSIFFKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAIL 358
Query: 381 EFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAG 560
+FID+GHD+ILAA +++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI
Sbjct: 359 DFIDSGHDLILAAGTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVS 538
Query: 561 DDLIHSDVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPSL 740
DD+I S VILG +K+EAPVLFRGI H NP+NSLVLKVLSASPSAYSANPK L+ PP+L
Sbjct: 539 DDVIDSKVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPAL 718
Query: 741 TGSAISL 761
GS+ISL
Sbjct: 719 IGSSISL 739
Score = 181 bits (390), Expect(2) = 5e-053
Identities = 96/192 (50%), Positives = 107/192 (55%)
Frame = -2 / -3
Query: 784 FLACITETNDIADPVSDGGDANLVFGLAEYADGEADRTFRTKLFDGLAMCPIPRNNTGAS 605
FL +I DP+S GG G AEYA+GEAD TF T+LF G IPR +TGAS
Sbjct: 762 FLPAQLTPKEIEDPISAGGRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGAS 583
Query: 604 IFSDPSITSEWIRSSPAIKV*SPSTSVTA*FXXXXXXXXXXXXXSTPHSVAMPRMRSEAE 425
F P IT E I SS IKV*S S TA* STP S A+ RMRSE
Sbjct: 582 SFFSPKITLESITSSLTIKV*SLSVFETA*LV*SITKAPRSSSKSTPQSAAISRMRSELV 403
Query: 424 ESAARIMSCPASINSRTAFWSTDPPKRGVEGAKSTRPS*RYWP*RWSESLGSSARRKSRS 245
AARI S P SI S+ A S +PP+ EGAK PS +YWP WS SLGS A KSRS
Sbjct: 402 VPAARIKSWPESIKSKIADKSNEPPRLSTEGAKRMSPSYKYWPYLWSASLGSCASLKSRS 223
Query: 244 NPRAWSEPKKAE 209
PR+ S KK E
Sbjct: 222 KPRSVSVLKKIE 187
Score = 78.0 bits (164), Expect(3) = 2e-024
Identities = 36/102 (35%), Positives = 60/102 (58%)
Frame = -1 / -2
Query: 677 *NLQNQTV*WISHVSNSSKQYRSLNLFRP*YHIRMDKIVTSNQGVITFNICDGIVHMVNN 498
*+ Q+Q V I +SN S+++ SL LF ++ +D IVT NQ +IT + + I ++NN
Sbjct: 655 *HFQHQAVCRI*RMSNPSEKHGSLELFLSQNNLGIDYIVTHNQSMITVSFRNSIASVINN 476
Query: 497 HCLWILIKINPTLCCNATNEIRGRGICRQDHVMPSINKFEDC 372
+ IKINP + + TNEIR ++ +M ++K ++C
Sbjct: 475 QSTQVFIKINPAVSSDITNEIRAGSASSKNQIMAGVDKVQNC 350
Score = 61.1 bits (127), Expect(2) = 2e-096
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +3 / +3
Query: 762 VSVMQARNNARVLLSGSLDLFSNRFLKSGVQK 857
VSV+QARNNARVL+SGSLDLFSN+F KS V+K
Sbjct: 741 VSVVQARNNARVLISGSLDLFSNKFFKSPVKK 836
Score = 48.3 bits (99), Expect(2) = 5e-053
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2 / -2
Query: 856 F*TPDFRNRLLNRSSDPDNSTRALFLACITET 761
F T D +N LLN+S DP+ TRALFLAC T+T
Sbjct: 835 FLTGDLKNLLLNKSRDPEIRTRALFLACTTDT 740
Score = 36.8 bits (74), Expect(3) = 2e-024
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = -1 / -1
Query: 857 LLNTRLQEPVAKQIE*SR*QHPSIISCLHN 768
L N ++ VAK I+ SR ++PSIISCLHN
Sbjct: 836 LFNRGFEKLVAK*IKGSRNKNPSIISCLHN 747
Score = 36.3 bits (73), Expect(3) = 2e-024
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -1 / -2
Query: 284 RELGIVSEAEVEIEPARLERAEEGRVRRPHGQVVQEDE 171
RELGI+ E EVEIE A E EE +R G +V E E
Sbjct: 262 RELGIMCELEVEIETAICECLEEN*MR*LDG*IVHEHE 149
>gb|DR022316.1|DR022316 STRS1_50_F11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_50_F11_A034 3', mRNA sequence
Length = 792
Score = 337 bits (730), Expect = 2e-091
Identities = 129/178 (72%), Positives = 151/178 (84%)
Frame = +3 / +2
Query: 852 QKADSKTRYERAGNEQFVAEISKWVFHERGHLKAVNVRHHKVGETNEPGMYRINDDLEYS 1031
+K S + ++GNEQFV+E+SKWVFHERGHLKAVNV+H KVGET EP MYRI D LEYS
Sbjct: 2 KKFGSSVEHAKSGNEQFVSELSKWVFHERGHLKAVNVQHRKVGETFEPAMYRITDHLEYS 181
Query: 1032 VEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSTDNKGLYSTTFKVPDVYGVFQFKVE 1211
VEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S DN GLYS +F+VPDVYGVFQFK+E
Sbjct: 182 VEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIE 361
Query: 1212 YQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMGAFFVFSFVYLYHK* 1385
YQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FF+F +LYHK*
Sbjct: 362 YQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFLYHK* 535
Score = 234 bits (505), Expect = 2e-060
Identities = 111/168 (66%), Positives = 122/168 (72%)
Frame = -2 / -1
Query: 1390 VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWY 1211
+LYL Y+ KK I+EN *YG A +MNLSYSLCL G TGIC +K+R V P+L Y
Sbjct: 540 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLKERLV*PTL*Y 361
Query: 1210 STLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSSATYGFQLVPDHS*IST 1031
S LNWKTP*TSGT EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 360 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 181
Query: 1030 EYSRSSLMRYMPGSLVSPTL*CLTLTAFRCPLSWKTHLLISATNCSFP 887
EYSR S++RY+ GS VSPTL C T TA R PLSWKTHLL S TNCS P
Sbjct: 180 EYSR*SVIRYIAGSKVSPTLRC*TFTALR*PLSWKTHLLNSDTNCSLP 37
Score = 166 bits (357), Expect = 4e-040
Identities = 73/167 (43%), Positives = 107/167 (64%)
Frame = -1 / -3
Query: 1385 LFVVQVHKREYEESTHC*K*GGVVWVR*CYESLILIMSVRTYWNLLCKRQTSISQSLVLN 1206
LF++ + + +E+ H K ++W+ E I ++ R Y NLL +R+T ++ L+LN
Sbjct: 535 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 356
Query: 1205 FELENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHIISNIRLPACSGPFIDLNRV 1026
F+LEN+IN+ N E I +++V QN+R HH KL LH+I N+RLP S PFI+ N V
Sbjct: 355 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 176
Query: 1025 FQVIINAVHAWFIGLPNLVMPNINSL*MSPLMENPFAYLCHKLLVSS 885
FQVI +++H+ F LPN M NI SL M+P MENP A HKLL+++
Sbjct: 175 FQVISDSIHSRFKSLPNFTMLNIYSLKMTPFMENPLA*FRHKLLIAT 35
Score = 124 bits (266), Expect = 2e-027
Identities = 71/157 (45%), Positives = 100/157 (63%)
Frame = +2 / +1
Query: 881 ESWKRAICGRDKQMGFP*EGTSKGC*C*ASQGWGDQ*TRHVPH***PGILC*DL*MVRNK 1060
+ W+ A+C KQ+GFP*+G+S GC C AS WGD *T +V + * PGIL *+L*M
Sbjct: 31 KKWQ*AVCV*IKQVGFP*KGSS*GCKCSAS*SWGDF*TCYVSNH*SPGILR*NL*MDWKG 210
Query: 1061 LEAVCC**CAASIFHDEPLRSENYVD*QQGFVFNNLQSSRCLWSFPVQS*VPKTGIYWSV 1240
LEA+ C * A+++ HDE L SE+ V *Q +F + SS LW FP+ +*V K ++ S+
Sbjct: 211 LEALHCR*RASAVLHDESLCSEDVVT*Q*RIIFCFVPSS*RLWCFPI*N*VSKGWLHKSL 390
Query: 1241 FYKADSSTSLQT**V*EIHNISVPILHRLIFNNGCFL 1351
F +ADS + Q +*++H + IL R IF++ FL
Sbjct: 391 FEQADSCKAFQAQRI*KVH*SCLSILWRCIFHDDRFL 501
Score = 116 bits (249), Expect = 3e-025
Identities = 67/160 (41%), Positives = 88/160 (55%)
Frame = +1 / +3
Query: 853 KRLIAKQDMRELETSNLWQR*ANGFSMRGDI*RLLMLGITRLGRPMNQACTALMMTWNTL 1032
K L + M+++ S+L *A+GFSM+G I RL M I +LGR +N C ++TWNT
Sbjct: 3 KSLAVQLSMQKVAMSSLCLN*ASGFSMKGVILRL*MFSIVKLGRLLNLLCIESLITWNTP 182
Query: 1033 LRSMNGPEQAGSRMLLMMCSFNFS**ALTF*KLCRLTTRVCIQQPSKFQMFMEFSSSKLS 1212
L+ MNG E+ GS L M C +F+** L F*+ C +T I SKF FM FS+ KLS
Sbjct: 183 LKFMNGLERIGSLTLQMTCKCSFT**VLMF*RRCHMTITDYILFRSKFLTFMVFSNLKLS 362
Query: 1213 TKDWDILVCLLQSRFQYVLTDIMSMRDS*HQRTHTTPPHF 1332
K V L SRF L+ +M+ S H HF
Sbjct: 363 IKGLVTQVSL*ASRFL*GLSGTTNMKGSLKLPIHIMEVHF 482
>gb|CF472897.1|CF472897 RTDS1_12_A05.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_12_A05_A015 5', mRNA sequence
Length = 772
Score = 325 bits (703), Expect = 8e-088
Identities = 135/192 (70%), Positives = 161/192 (83%)
Frame = +3 / +2
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVL 380
SSHS FF +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D +A+L
Sbjct: 197 SSHSIFFKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAIL 376
Query: 381 EFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAG 560
+FID+GHD+ILAAD+++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI
Sbjct: 377 DFIDSGHDLILAADTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVS 556
Query: 561 DDLIHSDVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPSL 740
DD+I S VILG +K+EAPVLFRGI H NP+NSLVLKVLSASPSAYSANPK L+ PP+L
Sbjct: 557 DDVIDSKVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPAL 736
Query: 741 TGSAISLVSVMQ 776
GS+ISLVSV+Q
Sbjct: 737 IGSSISLVSVVQ 772
Score = 191 bits (412), Expect = 1e-047
Identities = 98/189 (51%), Positives = 110/189 (58%)
Frame = -2 / -2
Query: 775 CITETNDIADPVSDGGDANLVFGLAEYADGEADRTFRTKLFDGLAMCPIPRNNTGASIFS 596
C T+T +I DP+S GG G AEYA+GEAD TF T+LF G IPR +TGAS F
Sbjct: 771 CTTDTKEIEDPISAGGRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFF 592
Query: 595 DPSITSEWIRSSPAIKV*SPSTSVTA*FXXXXXXXXXXXXXSTPHSVAMPRMRSEAEESA 416
P IT E I SS IKV*S S TA* STP S A+ RMRSE SA
Sbjct: 591 SPKITLESITSSLTIKV*SLSVFETA*LV*SITKAPRSSSKSTPQSAAISRMRSELVVSA 412
Query: 415 ARIMSCPASINSRTAFWSTDPPKRGVEGAKSTRPS*RYWP*RWSESLGSSARRKSRSNPR 236
ARI S P SI S+ A S +PP+ EGAK PS +YWP WS SLGS A KSRS PR
Sbjct: 411 ARIKSWPESIKSKIADKSNEPPRLSTEGAKRMSPSYKYWPYLWSASLGSCASLKSRSKPR 232
Query: 235 AWSEPKKAE 209
+ S KK E
Sbjct: 231 SVSVLKKIE 205
>gb|CF472908.1|CF472908 RTDS1_12_A06.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_12_A06_A015 5', mRNA sequence
Length = 769
Score = 322 bits (698), Expect = 4e-087
Identities = 134/191 (70%), Positives = 160/191 (83%)
Frame = +3 / +2
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVL 380
SSHS FF +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D +A+L
Sbjct: 197 SSHSIFFKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAIL 376
Query: 381 EFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAG 560
+FID+GHD+ILAAD+++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI
Sbjct: 377 DFIDSGHDLILAADTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVS 556
Query: 561 DDLIHSDVILGSEKIEAPVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPSL 740
DD+I S VILG +K+EAPVLFRGI H NP+NSLVLKVLSASPSAYSANPK L+ PP+L
Sbjct: 557 DDVIDSKVILGEKKLEAPVLFRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPAL 736
Query: 741 TGSAISLVSVM 773
GS+ISLVSV+
Sbjct: 737 IGSSISLVSVV 769
Score = 188 bits (404), Expect = 1e-046
Identities = 97/187 (51%), Positives = 109/187 (58%)
Frame = -2 / -2
Query: 769 TETNDIADPVSDGGDANLVFGLAEYADGEADRTFRTKLFDGLAMCPIPRNNTGASIFSDP 590
T+T +I DP+S GG G AEYA+GEAD TF T+LF G IPR +TGAS F P
Sbjct: 765 TDTKEIEDPISAGGRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPRKSTGASSFFSP 586
Query: 589 SITSEWIRSSPAIKV*SPSTSVTA*FXXXXXXXXXXXXXSTPHSVAMPRMRSEAEESAAR 410
IT E I SS IKV*S S TA* STP S A+ RMRSE SAAR
Sbjct: 585 KITLESITSSLTIKV*SLSVFETA*LV*SITKAPRSSSKSTPQSAAISRMRSELVVSAAR 406
Query: 409 IMSCPASINSRTAFWSTDPPKRGVEGAKSTRPS*RYWP*RWSESLGSSARRKSRSNPRAW 230
I S P SI S+ A S +PP+ EGAK PS +YWP WS SLGS A KSRS PR+
Sbjct: 405 IKSWPESIKSKIADKSNEPPRLSTEGAKRMSPSYKYWPYLWSASLGSCASLKSRSKPRSV 226
Query: 229 SEPKKAE 209
S KK E
Sbjct: 225 SVLKKIE 205
>gb|CX649825.1|CX649825 COLD1_41_E09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_41_E09_A029 5', mRNA sequence
Length = 817
Score = 317 bits (686), Expect = 2e-085
Identities = 121/159 (76%), Positives = 138/159 (86%)
Frame = +3 / -1
Query: 909 EISKWVFHERGHLKAVNVRHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWKPYVADDV 1088
E+SKWVFHERGHLKAVNV+H KVGET EP MYRI D LEYSVEIYEW+G WKPY+ADDV
Sbjct: 817 ELSKWVFHERGHLKAVNVQHRKVGETFEPAMYRITDHLEYSVEIYEWTGKDWKPYIADDV 638
Query: 1089 QLQFFMMSPYVLKTMSTDNKGLYSTTFKVPDVYGVFQFKVEYQRLGYTGLSFTKQIPVRP 1268
Q+QF+MMSPYVLKT+S DN GLYS +F+VPDVYGVFQFK+EYQR+GYT LS +KQIPVRP
Sbjct: 637 QVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLSLSKQIPVRP 458
Query: 1269 YRHNEYERFITSAYPYYTASFSTMGAFFVFSFVYLYHK* 1385
+RHNEYERFI +AYPYY +FS M FF+F +LYHK*
Sbjct: 457 FRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFLYHK* 341
Score = 219 bits (472), Expect = 6e-056
Identities = 104/159 (65%), Positives = 116/159 (72%)
Frame = -2 / +3
Query: 1390 VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWY 1211
+LYL Y+ KK I+EN *YG A +MNLSYSLCL G TGIC +++R V P+L Y
Sbjct: 336 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 515
Query: 1210 STLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSSATYGFQLVPDHS*IST 1031
S LNWKTP*TSGT EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 516 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 695
Query: 1030 EYSRSSLMRYMPGSLVSPTL*CLTLTAFRCPLSWKTHLL 914
EYSR S++RY+ GS VSPTL C T TA R PLSWKTHLL
Sbjct: 696 EYSR*SVIRYIAGSKVSPTLRC*TFTALR*PLSWKTHLL 812
Score = 157 bits (338), Expect = 2e-037
Identities = 69/157 (43%), Positives = 100/157 (63%)
Frame = -1 / +2
Query: 1385 LFVVQVHKREYEESTHC*K*GGVVWVR*CYESLILIMSVRTYWNLLCKRQTSISQSLVLN 1206
LF++ + + +E+ H K ++W+ E I ++ R Y NLL +R+T ++ L+LN
Sbjct: 341 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 520
Query: 1205 FELENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHIISNIRLPACSGPFIDLNRV 1026
F+LEN+IN+ N E I +++V QN+R HH KL LH+I N+RLP S PFI+ N V
Sbjct: 521 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 700
Query: 1025 FQVIINAVHAWFIGLPNLVMPNINSL*MSPLMENPFA 915
FQVI +++H+ F LPN M NI SL M+P MENP A
Sbjct: 701 FQVISDSIHSRFKSLPNFTMLNIYSLKMTPFMENPLA 811
Score = 114 bits (243), Expect = 2e-024
Identities = 67/146 (45%), Positives = 93/146 (63%)
Frame = +2 / -3
Query: 914 KQMGFP*EGTSKGC*C*ASQGWGDQ*TRHVPH***PGILC*DL*MVRNKLEAVCC**CAA 1093
KQ+GFP*+G+S GC C AS WGD *T +V + * PGIL *+L*M LEA+ C * A+
Sbjct: 812 KQVGFP*KGSS*GCKCSAS*SWGDF*TCYVSNH*SPGILR*NL*MDWKGLEALHCR*RAS 633
Query: 1094 SIFHDEPLRSENYVD*QQGFVFNNLQSSRCLWSFPVQS*VPKTGIYWSVFYKADSSTSLQ 1273
++ HDE L SE+ V *Q +F + SS LW FP+ +*V K ++ S+ +ADS + Q
Sbjct: 632 AVLHDESLCSEDVVT*Q*RIIFCFVPSS*RLWCFPI*N*VSKGWLHKSLSEQADSCKAFQ 453
Query: 1274 T**V*EIHNISVPILHRLIFNNGCFL 1351
+*++H + IL R IF++ FL
Sbjct: 452 AQRI*KVH*SCLSILWRCIFHDDRFL 375
Score = 109 bits (232), Expect = 8e-023
Identities = 62/140 (44%), Positives = 78/140 (55%)
Frame = +1 / -2
Query: 913 *ANGFSMRGDI*RLLMLGITRLGRPMNQACTALMMTWNTLLRSMNGPEQAGSRMLLMMCS 1092
*A+GFSM+G I RL M I +LGR +N C ++TWNT L+ MNG E+ GS L M C
Sbjct: 813 *ASGFSMKGVILRL*MFSIVKLGRLLNLLCIESLITWNTPLKFMNGLERIGSLTLQMTCK 634
Query: 1093 FNFS**ALTF*KLCRLTTRVCIQQPSKFQMFMEFSSSKLSTKDWDILVCLLQSRFQYVLT 1272
+F+** L F*+ C +T I SKF FM FS+ KLS K V L SRF L+
Sbjct: 633 CSFT**VLMF*RRCHMTITDYILFRSKFLTFMVFSNLKLSIKGLVTQVSL*ASRFL*GLS 454
Query: 1273 DIMSMRDS*HQRTHTTPPHF 1332
+M+ S H HF
Sbjct: 453 GTTNMKGSLKLPIHIMEVHF 394
>gb|CO198652.1|CO198652 GEO1_15_A02.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_15_A02_A029 5', mRNA sequence
Length = 596
Score = 247 bits (534), Expect(2) = 2e-077
Identities = 100/146 (68%), Positives = 121/146 (82%)
Frame = +3 / +1
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVL 380
SSHS FF +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D +A+L
Sbjct: 58 SSHSIFFKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAIL 237
Query: 381 EFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAG 560
+FID+GHD+ILAAD+++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI
Sbjct: 238 DFIDSGHDLILAADTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVS 417
Query: 561 DDLIHSDVILGSEKIEAPVLFRGIGH 638
DD+I S VILG +K+EAPVLFRGI H
Sbjct: 418 DDVIDSKVILGEKKLEAPVLFRGIAH 495
Score = 136 bits (292), Expect(2) = 3e-038
Identities = 74/141 (52%), Positives = 81/141 (57%)
Frame = -2 / -1
Query: 631 IPRNNTGASIFSDPSITSEWIRSSPAIKV*SPSTSVTA*FXXXXXXXXXXXXXSTPHSVA 452
IPR +TGAS F P IT E I SS IKV*S S TA* STP S A
Sbjct: 488 IPRKSTGASSFFSPKITLESITSSLTIKV*SLSVFETA*LV*SITKAPRSSSKSTPQSAA 309
Query: 451 MPRMRSEAEESAARIMSCPASINSRTAFWSTDPPKRGVEGAKSTRPS*RYWP*RWSESLG 272
+ RMRSE SAARI S P SI S+ A S +PP+ EGAK PS +YWP WS SLG
Sbjct: 308 ISRMRSELVVSAARIKSWPESIKSKIADKSNEPPRLSTEGAKRMSPSYKYWPYLWSASLG 129
Query: 271 SSARRKSRSNPRAWSEPKKAE 209
S A KSRS PR+ S KK E
Sbjct: 128 SCASLKSRSKPRSVSVLKKIE 66
Score = 63.8 bits (133), Expect(2) = 2e-077
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = +3 / +2
Query: 612 PVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPS 737
P G+ + NP+NSLVLKVLSASPSAYSANPK L+ PP+
Sbjct: 470 PCFSEGLLILLNPANSLVLKVLSASPSAYSANPKADLSRPPA 595
Score = 43.7 bits (89), Expect(2) = 3e-038
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2 / -3
Query: 733 GGDANLVFGLAEYADGEADRTFRTKLFDGLAMCPIPRNNTGA 608
GG G AEYA+GEAD TF T+LF G P G+
Sbjct: 591 GGRDRSALGFAEYAEGEADSTFSTRLFAGFKRMSNPSEKHGS 466
>gb|DT634670.1|DT634670 EST1149601 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG854 3' end, mRNA sequence
Length = 811
Score = 102 bits (218), Expect(7) = 2e-076
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +3 / +2
Query: 684 SPSAYSANPKTKLASPPSLTGSAISLVSVMQARNNARVLLSGSLDLFSNRFLKSGVQ 854
SPSAYSANPK L+ PP+L GS+ISLVSV+QARNNARVL+SGSLDLFSN+F KS V+
Sbjct: 635 SPSAYSANPKADLSRPPALIGSSISLVSVVQARNNARVLISGSLDLFSNKFFKSPVK 805
Score = 97.3 bits (206), Expect(7) = 2e-076
Identities = 39/53 (73%), Positives = 43/53 (81%)
Frame = +3 / +1
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGS 359
SSHS FF +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS
Sbjct: 145 SSHSIFFKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGS 303
Score = 79.0 bits (166), Expect(4) = 2e-035
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = -2 / -2
Query: 850 TPDFRNRLLNRSSDPDNSTRALFLACITETNDIADPVSDGGDANLVFGLAEYADGEA 680
T D +N LLN+S DP+ TRALFLAC T+T +I DP+S GG G AEYA+GE+
Sbjct: 801 TGDLKNLLLNKSRDPEIRTRALFLACTTDTKEIEDPISAGGRDRSALGFAEYAEGES 631
Score = 64.3 bits (134), Expect(4) = 2e-035
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = -2 / -3
Query: 358 DPPKRGVEGAKSTRPS*RYWP*RWSESLGSSARRKSRSNPRAWSEPKKAE 209
+PP+ EGAK PS +YWP WS SLGS A KSRS PR+ S KK E
Sbjct: 302 EPPRLSTEGAKRMSPSYKYWPYLWSASLGSCASLKSRSKPRSVSVLKKIE 153
Score = 55.1 bits (114), Expect(7) = 2e-076
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +3 / +2
Query: 492 AMVIDHMNYAVTDVEGDHTLIAGDDLIHSDVILGSEK 602
A+VIDH +YAV+ + DHTLI DD+I S VI G EK
Sbjct: 440 ALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVIFGREK 550
Score = 47.3 bits (97), Expect(7) = 2e-076
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +3 / +1
Query: 414 AADSSASDLIRGIATECGVDFDED 485
AAD+++SDLIR IA +CGVDFDED
Sbjct: 361 AADTTSSDLIRDIAADCGVDFDED 432
Score = 38.2 bits (77), Expect(7) = 2e-076
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +3 / +1
Query: 612 PVLFRGIGHMANPSNSLVLKVLSA 683
P GI H NP+NSLVLKVLSA
Sbjct: 562 PCFSEGIAHSLNPANSLVLKVLSA 633
Score = 35.0 bits (70), Expect(4) = 2e-035
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 605 NLFRP*YHIRMDKIVTSNQGVITFNICDGIVHMVNN 498
+ F P ++R+D IVT NQ +IT + + I ++NN
Sbjct: 553 SFFSPKNNLRIDYIVTHNQSMITVSFRNSIASVINN 446
Score = 30.4 bits (60), Expect(7) = 2e-076
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 582 VILGSEKIEAPVLFRG 629
+ LG +K+EAPVLFRG
Sbjct: 531 LFLGEKKLEAPVLFRG 578
Score = 28.1 bits (55), Expect(4) = 2e-035
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1 / -2
Query: 485 ILIKINPTLCCNATNEIRGRGICRQD 408
+ IKINP + + TNEIR + ++
Sbjct: 432 VFIKINPAVSSDITNEIRAGSVSSKE 355
Score = 27.2 bits (53), Expect(7) = 2e-076
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 378 LEFIDAGHDMIL 413
L+FID+GHD+IL
Sbjct: 324 LDFIDSGHDLIL 359
>gb|CF472877.1|CF472877 RTDS1_12_A06.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_12_A06_A015 3', mRNA sequence
Length = 632
Score = 251 bits (542), Expect = 1e-065
Identities = 95/128 (74%), Positives = 110/128 (85%)
Frame = +3 / +2
Query: 1002 YRINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSTDNKGLYSTTFKVPD 1181
YRI D LEYSVEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S DN GLYS +F+VPD
Sbjct: 2 YRITDHLEYSVEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPD 181
Query: 1182 VYGVFQFKVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMGAFFVFS 1361
VYGVFQFK+EYQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FF+F
Sbjct: 182 VYGVFQFKIEYQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFG 361
Query: 1362 FVYLYHK* 1385
+LYHK*
Sbjct: 362 LFFLYHK* 385
Score = 173 bits (372), Expect = 4e-042
Identities = 83/130 (63%), Positives = 94/130 (72%)
Frame = -2 / -3
Query: 1390 VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWY 1211
+LYL Y+ KK I+EN *YG A +MNLSYSLCL G TGIC +++R V P+L Y
Sbjct: 390 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 211
Query: 1210 STLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSSATYGFQLVPDHS*IST 1031
S LNWKTP*TSGT EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 210 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 31
Query: 1030 EYSRSSLMRY 1001
EYSR S++RY
Sbjct: 30 EYSR*SVIRY 1
Score = 121 bits (258), Expect = 2e-026
Identities = 52/128 (40%), Positives = 81/128 (63%)
Frame = -1 / -2
Query: 1385 LFVVQVHKREYEESTHC*K*GGVVWVR*CYESLILIMSVRTYWNLLCKRQTSISQSLVLN 1206
LF++ + + +E+ H K ++W+ E I ++ R Y NLL +R+T ++ L+LN
Sbjct: 385 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 206
Query: 1205 FELENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHIISNIRLPACSGPFIDLNRV 1026
F+LEN+IN+ N E I +++V QN+R HH KL LH+I N+RLP S PFI+ N V
Sbjct: 205 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 26
Query: 1025 FQVIINAV 1002
FQVI +++
Sbjct: 25 FQVISDSI 2
>gb|CF472832.1|CF472832 RTDS1_12_A05.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_12_A05_A015 3', mRNA sequence
Length = 629
Score = 248 bits (535), Expect = 1e-064
Identities = 94/127 (74%), Positives = 109/127 (85%)
Frame = +3 / +1
Query: 1005 RINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSTDNKGLYSTTFKVPDV 1184
RI D LEYSVEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S DN GLYS +F+VPDV
Sbjct: 1 RITDHLEYSVEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDV 180
Query: 1185 YGVFQFKVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMGAFFVFSF 1364
YGVFQFK+EYQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FF+F
Sbjct: 181 YGVFQFKIEYQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGL 360
Query: 1365 VYLYHK* 1385
+LYHK*
Sbjct: 361 FFLYHK* 381
Score = 167 bits (360), Expect = 2e-040
Identities = 81/128 (63%), Positives = 92/128 (71%)
Frame = -2 / -1
Query: 1390 VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWY 1211
+LYL Y+ KK I+EN *YG A +MNLSYSLCL G TGIC +++R V P+L Y
Sbjct: 386 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 207
Query: 1210 STLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSSATYGFQLVPDHS*IST 1031
S LNWKTP*TSGT EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 206 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 27
Query: 1030 EYSRSSLM 1007
EYSR S++
Sbjct: 26 EYSR*SVI 3
Score = 119 bits (255), Expect = 5e-026
Identities = 52/124 (41%), Positives = 78/124 (62%)
Frame = -1 / -3
Query: 1385 LFVVQVHKREYEESTHC*K*GGVVWVR*CYESLILIMSVRTYWNLLCKRQTSISQSLVLN 1206
LF++ + + +E+ H K ++W+ E I ++ R Y NLL +R+T ++ L+LN
Sbjct: 381 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 202
Query: 1205 FELENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHIISNIRLPACSGPFIDLNRV 1026
F+LEN+IN+ N E I +++V QN+R HH KL LH+I N+RLP S PFI+ N V
Sbjct: 201 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 22
Query: 1025 FQVI 1014
FQVI
Sbjct: 21 FQVI 10
>gb|DR685422.1|DR685422 EST1075499 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB366 3' end, mRNA sequence
Length = 530
Score = 122 bits (262), Expect(3) = 1e-064
Identities = 50/80 (62%), Positives = 63/80 (78%)
Frame = +3 / +3
Query: 384 FIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAGD 563
FID+GHD+ILAAD+++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI D
Sbjct: 138 FIDSGHDLILAADTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSD 317
Query: 564 DLIHSDVILGSEKIEAPVLF 623
D+I S VILG +K+E F
Sbjct: 318 DVIDSKVILGEKKLEGSRAF 377
Score = 90.4 bits (191), Expect(3) = 1e-064
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +3 / +2
Query: 612 PVLFRGIGHMANPSNSLVLKVLSASPSAYSANPKTKLASPPSLTGSAISLVSVM 773
P RGI H NP+NSLVLKVLSASPSAYSANPK L+ PP+L GS+ISLVSV+
Sbjct: 368 PCFSRGIAHSLNPANSLVLKVLSASPSAYSANPKADLSRPPALIGSSISLVSVV 529
Score = 73.9 bits (155), Expect(3) = 1e-064
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3 / +3
Query: 252 DFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVD 365
DF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D
Sbjct: 3 DFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLD 116
Score = 63.8 bits (133), Expect(3) = 5e-032
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = -2 / -3
Query: 769 TETNDIADPVSDGGDANLVFGLAEYADGEADRTFRTKLFDGLAMCPIPRNNTGA 608
T+T +I DP+S GG G AEYA+GEAD TF T+LF G IPR G+
Sbjct: 525 TDTKEIEDPISAGGRDRSALGFAEYAEGEADSTFSTRLFAGFKE*AIPREKHGS 364
Score = 62.0 bits (129), Expect(3) = 5e-032
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = -1 / -1
Query: 623 KQYRSLNLFRP*YHIRMDKIVTSNQGVITFNICDGIVHMVNNHCLWILIKINPTLCCNAT 444
K +L LF ++ +D IVT NQ +IT + + I ++NN + IKINP + + T
Sbjct: 377 KSTGALELFLSQNNLGIDYIVTHNQSMITVSFRNSIASVINNQSTQVFIKINPAVSSDIT 198
Query: 443 NEIRGRGICRQDHVMPSINK 384
NEIR + ++ +M ++K
Sbjct: 197 NEIRAGSVSSKNQIMAGVDK 138
Score = 51.5 bits (106), Expect(3) = 5e-032
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -2 / -2
Query: 364 STDPPKRGVEGAKSTRPS*RYWP*RWSESLGSSARRKS 251
S +PP+ EGAK PS +YWP WS SLGS A KS
Sbjct: 115 SNEPPRLSTEGAKRMSPSYKYWPYLWSASLGSCASLKS 2
>gb|BM134211.1|BM134211 NXLV_018_B02_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_018_B02 5' similar to Arabidopsis thaliana
sequence At5g66680
dolichyl-di-phosphooligosaccharide-protein
glycotransferase (oligosaccharyltransferase)-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 609
Score = 243 bits (526), Expect = 2e-063
Identities = 92/124 (74%), Positives = 107/124 (86%)
Frame = +3 / +3
Query: 1014 DDLEYSVEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSTDNKGLYSTTFKVPDVYGV 1193
D LEYSVEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S DN GLYS +F+VPDVYGV
Sbjct: 21 DHLEYSVEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGV 200
Query: 1194 FQFKVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMGAFFVFSFVYL 1373
FQFK+EYQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FF+F +L
Sbjct: 201 FQFKIEYQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFL 380
Query: 1374 YHK* 1385
YHK*
Sbjct: 381 YHK* 392
Score = 167 bits (360), Expect = 2e-040
Identities = 82/131 (62%), Positives = 92/131 (70%)
Frame = -2 / -3
Query: 1390 VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWY 1211
+LYL Y+ KK I+EN *YG A +MNLSYSLCL G TGIC +++R V P+L Y
Sbjct: 397 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 218
Query: 1210 STLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSSATYGFQLVPDHS*IST 1031
S LNWKTP*TSGT EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 217 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 38
Query: 1030 EYSRSSLMRYM 998
EYSR S+ M
Sbjct: 37 EYSR*SVPAIM 5
Score = 119 bits (255), Expect = 5e-026
Identities = 52/124 (41%), Positives = 78/124 (62%)
Frame = -1 / -2
Query: 1385 LFVVQVHKREYEESTHC*K*GGVVWVR*CYESLILIMSVRTYWNLLCKRQTSISQSLVLN 1206
LF++ + + +E+ H K ++W+ E I ++ R Y NLL +R+T ++ L+LN
Sbjct: 392 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 213
Query: 1205 FELENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHIISNIRLPACSGPFIDLNRV 1026
F+LEN+IN+ N E I +++V QN+R HH KL LH+I N+RLP S PFI+ N V
Sbjct: 212 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 33
Query: 1025 FQVI 1014
FQVI
Sbjct: 32 FQVI 21
>gb|CF475415.1|CF475415 RTWW2_12_A06.b1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_12_A06_A021 3', mRNA sequence
Length = 679
Score = 239 bits (517), Expect = 4e-062
Identities = 90/121 (74%), Positives = 105/121 (86%)
Frame = +3 / +1
Query: 1023 EYSVEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSTDNKGLYSTTFKVPDVYGVFQF 1202
EYSVEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S DN GLYS +F+VPDVYGVFQF
Sbjct: 1 EYSVEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQF 180
Query: 1203 KVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMGAFFVFSFVYLYHK 1382
K+EYQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FF+F +LYHK
Sbjct: 181 KIEYQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFLYHK 360
Query: 1383 * 1385
*
Sbjct: 361 * 363
Score = 162 bits (349), Expect = 6e-039
Identities = 78/122 (63%), Positives = 87/122 (71%)
Frame = -2 / -3
Query: 1390 VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWY 1211
+LYL Y+ KK I+EN *YG A +MNLSYSLCL G TGIC +++R V P+L Y
Sbjct: 368 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 189
Query: 1210 STLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSSATYGFQLVPDHS*IST 1031
S LNWKTP*TSGT EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 188 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 9
Query: 1030 EY 1025
EY
Sbjct: 8 EY 3
Score = 113 bits (242), Expect = 3e-024
Identities = 49/121 (40%), Positives = 75/121 (61%)
Frame = -1 / -2
Query: 1385 LFVVQVHKREYEESTHC*K*GGVVWVR*CYESLILIMSVRTYWNLLCKRQTSISQSLVLN 1206
LF++ + + +E+ H K ++W+ E I ++ R Y NLL +R+T ++ L+LN
Sbjct: 363 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 184
Query: 1205 FELENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHIISNIRLPACSGPFIDLNRV 1026
F+LEN+IN+ N E I +++V QN+R HH KL LH+I N+RLP S PFI+ N V
Sbjct: 183 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGV 4
Query: 1025 F 1023
F
Sbjct: 3 F 1
>gb|AW010860.1|AW010860 ST12C08 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST12C08, mRNA sequence
Length = 492
Score = 218 bits (471), Expect(2) = 2e-060
Identities = 88/130 (67%), Positives = 106/130 (81%)
Frame = +3 / +2
Query: 267 DDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVLEFIDAGHDMILAADSSASDLIR 446
DDPKL+L RYGQYLYDGL+LFAPS GGS+D +A L FID+GHD+ILAAD+++SDLIR
Sbjct: 8 DDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAXLGFIDSGHDLILAADTTSSDLIR 187
Query: 447 GIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAGDDLIHSDVILGSEKIEAPVLFR 626
IA +CGVDFDED A+VIDH +YAV+ + DHTLI DD+I S VILG +K+EAPVLFR
Sbjct: 188 DIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVSDDVIDSKVILGEKKLEAPVLFR 367
Query: 627 GIGHMANPSN 656
GI H NP+N
Sbjct: 368 GIAHSLNPAN 397
Score = 120 bits (256), Expect(2) = 6e-030
Identities = 66/131 (50%), Positives = 72/131 (54%)
Frame = -2 / -1
Query: 658 LFDGLAMCPIPRNNTGASIFSDPSITSEWIRSSPAIKV*SPSTSVTA*FXXXXXXXXXXX 479
LF G IPR +TGAS F P IT E I SS IKV*S S TA*
Sbjct: 399 LFAGFKE*AIPRKSTGASSFFSPKITLESITSSLTIKV*SLSVFETA*LV*SITKAPRSS 220
Query: 478 XXSTPHSVAMPRMRSEAEESAARIMSCPASINSRTAFWSTDPPKRGVEGAKSTRPS*RYW 299
STP S A+ RMRSE SAARI S P SI + A S +PP+ EGAK PS +YW
Sbjct: 219 SKSTPQSAAISRMRSELVVSAARIKSWPESIXPKXADKSNEPPRLSTEGAKRMSPSYKYW 40
Query: 298 P*RWSESLGSS 266
P WS SLGSS
Sbjct: 39 PYLWSASLGSS 7
Score = 35.9 bits (72), Expect(2) = 2e-060
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3 / +3
Query: 657 SLVLKVLSASPSAYSANPKT 716
SLVLKVLSASPSAYSA ++
Sbjct: 399 SLVLKVLSASPSAYSAKSQS 458
Score = 32.2 bits (64), Expect(2) = 6e-030
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2 / -3
Query: 715 VFGLAEYADGEADRTFRTKL 656
++ AEYA+GEAD TF T+L
Sbjct: 457 LWDFAEYAEGEADSTFSTRL 398
>gb|BF609050.1|BF609050 NXSI_039_G11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_039_G11 5' similar to Arabidopsis thaliana
sequence At5g66680
dolichyl-di-phosphooligosaccharide-protein
glycotransferase (oligosaccharyltransferase)-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 384
Score = 232 bits (501), Expect = 6e-060
Identities = 90/126 (71%), Positives = 104/126 (82%)
Frame = +3 / +3
Query: 963 RHHKVGETNEPGMYRINDDLEYSVEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSTD 1142
+H KVGET EP MYRI D LEYSVEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S D
Sbjct: 3 QHRKVGETFEPAMYRITDHLEYSVEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHD 182
Query: 1143 NKGLYSTTFKVPDVYGVFQFKVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYT 1322
N GLYS +F+VPDVYGVFQFK+EYQR+GYT LS +KQIPV + NEYE I +AYPYY
Sbjct: 183 NNGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLSLSKQIPVXXFXXNEYEXXIKAAYPYYG 362
Query: 1323 ASFSTM 1340
+FS M
Sbjct: 363 XAFSMM 380
Score = 166 bits (357), Expect = 4e-040
Identities = 81/125 (64%), Positives = 91/125 (72%)
Frame = -2 / -3
Query: 1339 IVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWYSTLNWKTP*TSGTLKVV 1160
I+EN *YG A +M LSYSL TGIC +++R V P+L YS LNWKTP*TSGT
Sbjct: 379 IMENAXP*YG*AALMXLSYSLXXKXXTGICLLRERLV*PTL*YSILNWKTP*TSGTWNET 200
Query: 1159 EYKPLLSVDIVFRT*GLIMKN*SCTSSATYGFQLVPDHS*ISTEYSRSSLMRYMPGSLVS 980
EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*ISTEYSR S++RY+ GS VS
Sbjct: 199 EYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*ISTEYSR*SVIRYIAGSKVS 20
Query: 979 PTL*C 965
PTL C
Sbjct: 19 PTLRC 5
Score = 124 bits (265), Expect = 2e-027
Identities = 51/118 (43%), Positives = 74/118 (62%)
Frame = -1 / -2
Query: 1319 VVWVR*CYESLILIMSVRTYWNLLCKRQTSISQSLVLNFELENSINIWNFEGC*IQTLVV 1140
++W+ I + Y NLL +R+T ++ L+LNF+LEN+IN+ N E I +++V
Sbjct: 359 IIWIGSFNXXFIFVXXEXXYRNLLAQRETCVTNPLILNFKLENTINVRNLERNRI*SVIV 180
Query: 1139 SRHSFQNVRAHHEKLKLHIISNIRLPACSGPFIDLNRVFQVIINAVHAWFIGLPNLVM 966
QN+R HH KL LH+I N+RLP S PFI+ N VFQVI +++H+ F LPN M
Sbjct: 179 M*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFNGVFQVISDSIHSRFKSLPNFTM 6
>gb|CF399777.1|CF399777 RTWW1_1_D05.b1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_1_D05_A015 3', mRNA sequence
Length = 677
Score = 232 bits (501), Expect = 6e-060
Identities = 87/118 (73%), Positives = 102/118 (86%)
Frame = +3 / +2
Query: 1032 VEIYEWSGTSWKPYVADDVQLQFFMMSPYVLKTMSTDNKGLYSTTFKVPDVYGVFQFKVE 1211
VEIYEW+G WKPY+ADDVQ+QF+MMSPYVLKT+S DN GLYS +F+VPDVYGVFQFK+E
Sbjct: 2 VEIYEWTGKDWKPYIADDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIE 181
Query: 1212 YQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMGAFFVFSFVYLYHK* 1385
YQR+GYT LS +KQIPVRP+RHNEYERFI +AYPYY +FS M FF+F +LYHK*
Sbjct: 182 YQRVGYTSLSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFLYHK* 355
Score = 157 bits (337), Expect = 3e-037
Identities = 76/120 (63%), Positives = 85/120 (70%)
Frame = -2 / -3
Query: 1390 VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWY 1211
+LYL Y+ KK I+EN *YG A +MNLSYSLCL G TGIC +++R V P+L Y
Sbjct: 360 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 181
Query: 1210 STLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSSATYGFQLVPDHS*IST 1031
S LNWKTP*TSGT EY PLLS D VFRT*GLIM N +CTSSA GFQ P HS*IST
Sbjct: 180 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSSAM*GFQSFPVHS*IST 1
Score = 110 bits (234), Expect = 4e-023
Identities = 47/118 (39%), Positives = 73/118 (61%)
Frame = -1 / -2
Query: 1385 LFVVQVHKREYEESTHC*K*GGVVWVR*CYESLILIMSVRTYWNLLCKRQTSISQSLVLN 1206
LF++ + + +E+ H K ++W+ E I ++ R Y NLL +R+T ++ L+LN
Sbjct: 355 LFMI*EEQTKNKETCHHGKCTSIIWIGSFNEPFIFVVPERPYRNLLAQRETCVTNPLILN 176
Query: 1205 FELENSINIWNFEGC*IQTLVVSRHSFQNVRAHHEKLKLHIISNIRLPACSGPFIDLN 1032
F+LEN+IN+ N E I +++V QN+R HH KL LH+I N+RLP S PFI+ N
Sbjct: 175 FKLENTINVRNLERNRI*SVIVM*QRLQNIRTHHVKLHLHVICNVRLPILSSPFINFN 2
>gb|BQ634041.1|BQ634041 NXRV065_A08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV065_A08 5' similar to Arabidopsis thaliana
sequence At5g66680
dolichyl-di-phosphooligosaccharide-protein
glycotransferase (oligosaccharyltransferase)-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 560
Score = 210 bits (453), Expect = 3e-053
Identities = 84/124 (67%), Positives = 103/124 (83%)
Frame = +3 / +2
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVL 380
SSHS FF +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D +A+L
Sbjct: 185 SSHSIFFKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAIL 364
Query: 381 EFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTDVEGDHTLIAG 560
+FID+GHD+ILAAD+++SDLIR IA +CGVDFDED A+VIDH +YAV+ + DHTLI
Sbjct: 365 DFIDSGHDLILAADTTSSDLIRDIAADCGVDFDEDLGALVIDHTSYAVSKTDSDHTLIVS 544
Query: 561 DDLI 572
DD+I
Sbjct: 545 DDVI 556
Score = 111 bits (238), Expect = 1e-023
Identities = 62/121 (51%), Positives = 68/121 (56%)
Frame = -2 / -3
Query: 571 IRSSPAIKV*SPSTSVTA*FXXXXXXXXXXXXXSTPHSVAMPRMRSEAEESAARIMSCPA 392
I SS IKV*S S TA* STP S A+ RMRSE SAARI S P
Sbjct: 555 ITSSLTIKV*SLSVFETA*LV*SITKAPRSSSKSTPQSAAISRMRSELVVSAARIKSWPE 376
Query: 391 SINSRTAFWSTDPPKRGVEGAKSTRPS*RYWP*RWSESLGSSARRKSRSNPRAWSEPKKA 212
SI S+ A S +PP+ EGAK PS +YWP WS SLGS A KSRS PR+ S KK
Sbjct: 375 SIKSKIADKSNEPPRLSTEGAKRMSPSYKYWPYLWSASLGSCASLKSRSKPRSVSVLKKI 196
Query: 211 E 209
E
Sbjct: 195 E 193
>gb|CF475000.1|CF475000 RTWW2_5_G11.b1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_5_G11_A021 3', mRNA sequence
Length = 617
Score = 196 bits (422), Expect = 5e-049
Identities = 75/102 (73%), Positives = 88/102 (86%)
Frame = +3 / +3
Query: 1080 DDVQLQFFMMSPYVLKTMSTDNKGLYSTTFKVPDVYGVFQFKVEYQRLGYTGLSFTKQIP 1259
DDVQ+QF+MMSPYVLKT+S DN GLYS +F+VPDVYGVFQFK+EYQR+GYT LS +KQIP
Sbjct: 3 DDVQVQFYMMSPYVLKTLSHDNNGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLSLSKQIP 182
Query: 1260 VRPYRHNEYERFITSAYPYYTASFSTMGAFFVFSFVYLYHK* 1385
VRP+RHNEYERFI +AYPYY +FS M FF+F +LYHK*
Sbjct: 183 VRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFLYHK* 308
Score = 137 bits (294), Expect = 2e-031
Identities = 65/104 (62%), Positives = 74/104 (71%)
Frame = -2 / -2
Query: 1390 VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKDRPVYPSLWY 1211
+LYL Y+ KK I+EN *YG A +MNLSYSLCL G TGIC +++R V P+L Y
Sbjct: 313 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRERLV*PTL*Y 134
Query: 1210 STLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN*SCTSS 1079
S LNWKTP*TSGT EY PLLS D VFRT*GLIM N +CTSS
Sbjct: 133 SILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*NCTCTSS 2
>gb|BQ697139.1|BQ697139 NXPV_050_A04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_050_A04 5' similar to Arabidopsis
thaliana sequence At5g66680
dolichyl-di-phosphooligosaccharide-protein
glycotransferase (oligosaccharyltransferase)-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 420
Score = 149 bits (321), Expect(2) = 9e-049
Identities = 60/103 (58%), Positives = 79/103 (76%)
Frame = +3 / +1
Query: 351 GGSVDQNAVLEFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDHMNYAVTD 530
GGS+D +A+L+FID+GHD+ILAAD+++SDLIR IA +CGVDFDED A+VIDH +YAV+
Sbjct: 112 GGSLDLSAILDFIDSGHDLILAADTTSSDLIRDIAADCGVDFDEDLXALVIDHTSYAVSK 291
Query: 531 VEGDHTLIAGDDLIHSDVILGSEKIEAPVLFRGIGHMANPSNS 659
+ DHTLI DD+I S ILG +K+ PVLFR P+N+
Sbjct: 292 TDSDHTLIVSDDVIDSXXILGEKKLXXPVLFRRXAXXXXPANN 420
Score = 65.7 bits (137), Expect(2) = 9e-049
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3 / +1
Query: 249 LDFRLADDPKLSLHRYGQYLYDGLVLFAPS 338
LDF+LA DPKL+L RYGQYLYDGL+LFAPS
Sbjct: 1 LDFKLAHDPKLALQRYGQYLYDGLILFAPS 90
>gb|BX784112.1|BX784112 BX784112 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 129C08, mRNA sequence
Length = 631
Score = 104 bits (222), Expect(2) = 1e-042
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = +3 / +3
Query: 1095 QFFMMSPYVLKTMSTDNKGLYSTTFKVPDVYGVFQFKVEYQRLGYTGLS 1241
QF+MMSPYVLKT+S DNKGLYS +F+VPDVYGVFQFK+EYQR+GYT LS
Sbjct: 3 QFYMMSPYVLKTLSHDNKGLYSVSFQVPDVYGVFQFKIEYQRVGYTSLS 149
Score = 90.4 bits (191), Expect(2) = 1e-042
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = +3 / +1
Query: 1230 TGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMGAFFVFSFVYLYHK* 1385
T +S +KQIPVRP+RHNEYERFI +AYPYY +FS M FF+F +LYHK*
Sbjct: 136 TQVSLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFGLFFLYHK* 291
Score = 72.5 bits (152), Expect(2) = 5e-024
Identities = 34/48 (70%), Positives = 36/48 (75%)
Frame = -2 / -1
Query: 1240 DRPVYPSLWYSTLNWKTP*TSGTLKVVEYKPLLSVDIVFRT*GLIMKN 1097
+R V P+L YS LNWKTP*TSGT EY PLLS D VFRT*GLIM N
Sbjct: 148 ERLV*PTL*YSILNWKTP*TSGTWNETEYNPLLSCDNVFRT*GLIM*N 5
Score = 60.2 bits (125), Expect(2) = 5e-024
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = -2 / -3
Query: 1390 VLYLWYRYTNENTKKAPIVENEAV*YGYADVMNLSYSLCL*GRTGICFVKD 1238
+LYL Y+ KK I+EN *YG A +MNLSYSLCL G TGIC +++
Sbjct: 296 LLYL*YKKNKPKIKKPVIMENAPP*YG*AALMNLSYSLCLKGLTGICLLRE 144
>gb|AW042634.1|AW042634 ST24B10 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST24B10, mRNA sequence
Length = 601
Score = 104 bits (221), Expect(3) = 2e-033
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +3 / +2
Query: 273 PKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVLEFIDAGHDMILAADSSASDLIRGI 452
P RYGQYLYDGL+LFAPS GGS+D +A+L+FID+GHD+ILAAD++ SDL R I
Sbjct: 302 PSSCSKRYGQYLYDGLILFAPSVDNLGGSLDLSAILDFIDSGHDLILAADTNNSDLNRDI 481
Query: 453 ATECG 467
A +CG
Sbjct: 482 AADCG 496
Score = 50.1 bits (103), Expect(3) = 2e-033
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +3 / +1
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSL 287
SSHS FF +L RGFDLDF+LA DPKL L
Sbjct: 229 SSHSIFFKTLTDRGFDLDFKLAHDPKLVL 315
Score = 28.1 bits (55), Expect(3) = 2e-033
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3 / +3
Query: 465 GVDFDEDPEAMVIDHMNYAVTDVE 536
G DFDE + IDH +YAV+ +
Sbjct: 495 GXDFDERLGCLGIDHTSYAVSKTD 566
>gb|BQ655120.1|BQ655120 NXRV090_E02_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV090_E02 5' similar to Arabidopsis thaliana
sequence At5g66680
dolichyl-di-phosphooligosaccharide-protein
glycotransferase (oligosaccharyltransferase)-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 461
Score = 144 bits (309), Expect = 2e-033
Identities = 58/84 (69%), Positives = 71/84 (84%)
Frame = +3 / +1
Query: 201 SSHSAFFGSLQARGFDLDFRLADDPKLSLHRYGQYLYDGLVLFAPSTPRFGGSVDQNAVL 380
SSHS FF +L RGFDLDF+LA DPKL+L RYGQYLYDGL+LFAPS GGS+D +A+L
Sbjct: 166 SSHSIFFKTLTDRGFDLDFKLAHDPKLALQRYGQYLYDGLILFAPSVDNLGGSLDLSAIL 345
Query: 381 EFIDAGHDMILAADSSASDLIRGI 452
+FID+GHD+ILAAD+++SDLI I
Sbjct: 346 DFIDSGHDLILAADTTSSDLIXDI 417
>gb|BM493698.1|BM493698 NXLV_069_D04_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_069_D04 5' similar to Arabidopsis thaliana
sequence At5g66680
dolichyl-di-phosphooligosaccharide-protein
glycotransferase (oligosaccharyltransferase)-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 511
Score = 127 bits (273), Expect = 2e-028
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +3 / +3
Query: 1182 VYGVFQFKVEYQRLGYTGLSFTKQIPVRPYRHNEYERFITSAYPYYTASFSTMGAFFVFS 1361
VYGVFQFK+EYQR+GYT L +KQIPVRP+RHNEYERFI +AYPYY +FS M FF+F
Sbjct: 18 VYGVFQFKIEYQRVGYTSLPLSKQIPVRPFRHNEYERFIKAAYPYYGGAFSMMTGFFIFG 197
Query: 1362 FVYLYHK* 1385
+LYHK*
Sbjct: 198 LFFLYHK* 221
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 917,320,486
Number of Sequences: 355925
Number of extensions: 13073857
Number of successful extensions: 54811
Number of sequences better than 1.0e-020: 41
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 28571511915
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)