TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCH13e05.yg.2.1
(577 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK070606.1| Oryza sativa (japonica cultivar-group) cDNA... 233 5e-062
gb|AACV01018395.1| Oryza sativa (japonica cultivar-group) c... 177 7e-054
dbj|AP003509.3| Oryza sativa (japonica cultivar-group) geno... 177 7e-053
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 177 8e-051
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 177 1e-042
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 177 1e-042
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 177 1e-042
ref|XM_466403.1| Oryza sativa (japonica cultivar-group), mRNA 155 3e-036
dbj|AK101169.1| Oryza sativa (japonica cultivar-group) cDNA... 142 4e-032
gb|AACV01004761.1| Oryza sativa (japonica cultivar-group) c... 118 2e-030
dbj|AP006070.2| Oryza sativa (japonica cultivar-group) geno... 118 9e-030
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 118 3e-028
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 118 4e-025
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 118 4e-025
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 118 4e-025
gb|AACV01000929.1| Oryza sativa (japonica cultivar-group) c... 106 4e-022
gb|CV730758.1|CV730758 FLO--04-H15.b1 Rice flower lambda ph... 107 8e-022
dbj|AK064329.1| Oryza sativa (japonica cultivar-group) cDNA... 107 8e-022
dbj|AK100100.1| Oryza sativa (japonica cultivar-group) cDNA... 107 8e-022
ref|XM_476977.1| Oryza sativa (japonica cultivar-group), mRNA 107 8e-022
ref|XM_506213.1| PREDICTED Oryza sativa (japonica cultivar-... 107 8e-022
ref|XM_506214.1| PREDICTED Oryza sativa (japonica cultivar-... 107 8e-022
dbj|AP002869.1| Oryza sativa (japonica cultivar-group) geno... 106 9e-022
ref|XM_469993.1| Oryza sativa (japonica cultivar-group), mRNA 107 1e-021
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 106 2e-021
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 106 2e-021
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 106 2e-021
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 106 2e-021
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 106 2e-021
dbj|AK101244.1| Oryza sativa (japonica cultivar-group) cDNA... 105 3e-021
>dbj|AK070606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056D08, full
insert sequence
Length = 3132
Score = 233 bits (503), Expect(2) = 5e-062
Identities = 91/99 (91%), Positives = 96/99 (96%)
Frame = -1 / +2
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 335
AHGPGYIVS+DIAKEVYRKHK GELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE
Sbjct: 2348 AHGPGYIVSQDIAKEVYRKHKRGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 2527
Query: 334 GCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*QKS 218
GCE+GYV+AHYQEPRDMMCLWD+F KTKRGTCCKE*+ S
Sbjct: 2528 GCEEGYVVAHYQEPRDMMCLWDKFLKTKRGTCCKE*RGS 2644
Score = 200 bits (431), Expect = 1e-049
Identities = 88/116 (75%), Positives = 92/116 (79%)
Frame = +3 / -1
Query: 228 YSLQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHI 407
YSLQHVPRFVF N S RHI+SLGSW* A T PSS PSTKILPSFSY TS PSFFISLIHI
Sbjct: 2634 YSLQHVPRFVFRNLSHRHIMSLGSW*CATTYPSSQPSTKILPSFSYFTSNPSFFISLIHI 2455
Query: 408 PIATSSSLNIFNSPLLCFL*TSLAMSFETIYPGPCAQXXXXXXXXXXXVMYHLLYG 575
PIATSSSLNI +SPLLCFL*TS AMS +T+YPGPCA VMYHLLYG
Sbjct: 2454 PIATSSSLNILSSPLLCFL*TSFAMSCDTMYPGPCAHGG*LSSGHSSGVMYHLLYG 2287
Score = 194 bits (419), Expect = 5e-048
Identities = 80/116 (68%), Positives = 94/116 (81%)
Frame = -3 / +1
Query: 572 V*QVVHNP*GMA*GELSSLGAWTRIYCFKGHS*RSLQETQEWGVKDVQAGGCRNGNMDQ* 393
+*QVVHNP GMA*GELSS+G W+ I+C HS RSLQETQE DVQ CRNGNMDQ*
Sbjct: 2290 I*QVVHNPRGMA*GELSSMGTWSGIHCITRHSKRSLQETQERRT*DVQTRRCRNGNMDQ* 2469
Query: 392 DEEGWLGCQV*E*WEDFG*RMRGWLCDCSLPRTKGYDVPLGSVSENKTRNMLQRIT 225
DEEGW+GC+V*+*WEDFG R+ G +C C+LP KG+DVP+G +SENKTRNMLQ +T
Sbjct: 2470 DEEGWVGCKV*K*WEDFGRRL*GRICGCTLPGAKGHDVPMGQISENKTRNMLQGVT 2637
Score = 99.6 bits (211), Expect(2) = 8e-031
Identities = 43/58 (74%), Positives = 46/58 (79%)
Frame = +2 / -3
Query: 398 DPYSHCDILQLEHL*LPTLVFPVNFFSYVL*NNISWSMRPGRITLLRPFLRGYVPLAI 571
DPYSHCDI EHL +LVFPVNFF YVL* N+S +M P RITLLRPFL GYVPLAI
Sbjct: 2464 DPYSHCDIF*FEHLKFSSLVFPVNFFCYVL*YNVSRTMCPWRITLLRPFLWGYVPLAI 2291
Score = 88.6 bits (187), Expect(2) = 8e-027
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = -2 / +3
Query: 570 IASGT*PLRNGLRRVILPGRMDQDILFQRT*LKKFTGNTRVGS*RCSSWRMSQWEY 403
IASGT*P RNGLRRVIL G M +D L+ +T* KKFTGNTR + RCS+ +MSQWEY
Sbjct: 2292 IASGT*PQRNGLRRVILHGHMVRDTLYHKT*QKKFTGNTREENLRCSN*KMSQWEY 2459
Score = 85.8 bits (181), Expect(2) = 9e-026
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = +1 / -2
Query: 403 IFPLRHPPA*TSLTPHSCVSCKLL*LCPLKQYILVHAPREDNSPQAIPQGLCTTCY 570
IFPLRH *TS SCVSCKLL LC + Q I H P EDNSPQAIP GLCTTCY
Sbjct: 2459 IFPLRHLLV*TS*VLLSCVSCKLLLLCLVIQCIPDHVPMEDNSPQAIPLGLCTTCY 2292
Score = 57.9 bits (120), Expect(2) = 8e-031
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2 / -3
Query: 263 KLIPEAHHIPWFLVMSNHIAILASFNQNPP 352
K +P AHH+PW LVM NHI+ L +F+QNPP
Sbjct: 2599 KFVP*AHHVPWLLVMCNHISFLTAFDQNPP 2510
Score = 55.6 bits (115), Expect(2) = 8e-027
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -2 / +3
Query: 345 FWLKDARMAM*LLITKNQGI*CASGISFRKQNEEHVAKNN 226
FW K R M L IT++QG *CA G +F KQNEEHVA++N
Sbjct: 2517 FWSKAVRKDMWLHITRSQGT*CAYGTNF*KQNEEHVARSN 2636
Score = 54.7 bits (113), Expect(2) = 9e-026
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +1 / -2
Query: 235 CNMFLVLFSETDPRGTSYPLVLGNEQSHSHPRILQPK 345
CNMFLVLFSE P GTS PL GN Q H P L+PK
Sbjct: 2627 CNMFLVLFSEICPIGTSCPLAPGNVQPHILPHSLRPK 2517
Score = 28.6 bits (56), Expect(2) = 5e-062
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / +2
Query: 577 DPYSKWYIT 551
DPYSKWYIT
Sbjct: 2285 DPYSKWYIT 2311
>gb|AACV01018395.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018395, whole
genome shotgun sequence
Length = 49262
Score = 177 bits (380), Expect(3) = 7e-054
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = -1 / -3
Query: 442 LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQF 263
L+MFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCE+GYV+AHYQEPRDMMCLWD+F
Sbjct: 41118 LQMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEEGYVVAHYQEPRDMMCLWDKF 40939
Query: 262 QKTKRGTCCKE*QKS 218
KTKRGTCCKE*+ S
Sbjct: 40938 LKTKRGTCCKE*RGS 40894
Score = 137 bits (293), Expect(3) = 3e-040
Identities = 61/73 (83%), Positives = 63/73 (86%)
Frame = +3 / +2
Query: 228 YSLQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHI 407
YSLQHVPRFVF N S RHI+SLGSW* A T PSS PSTKILPSFSY TS PSFFISLIHI
Sbjct: 40904 YSLQHVPRFVFRNLSHRHIMSLGSW*CATTYPSSQPSTKILPSFSYFTSNPSFFISLIHI 41083
Query: 408 PIATSSSLNIFNS 446
PIATSSSLNI N+
Sbjct: 41084 PIATSSSLNICNT 41122
Score = 131 bits (281), Expect(2) = 2e-037
Identities = 50/73 (68%), Positives = 61/73 (83%)
Frame = -3 / -2
Query: 443 VKDVQAGGCRNGNMDQ*DEEGWLGCQV*E*WEDFG*RMRGWLCDCSLPRTKGYDVPLGSV 264
+ DVQ CRNGNMDQ*DEEGW+GC+V*+*WEDFG R+ G +C C+LP KG+DVP+G +
Sbjct: 41119 IADVQTRRCRNGNMDQ*DEEGWVGCKV*K*WEDFGRRL*GRICGCTLPGAKGHDVPMGQI 40940
Query: 263 SENKTRNMLQRIT 225
SENKTRNMLQ +T
Sbjct: 40939 SENKTRNMLQGVT 40901
Score = 62.0 bits (129), Expect(3) = 7e-054
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -1 / -2
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKM 434
AHGPGYIVS+DIAKEVYRKHK GELK+
Sbjct: 41374 AHGPGYIVSQDIAKEVYRKHKRGELKV 41294
Score = 57.9 bits (120), Expect(3) = 3e-040
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +2 / +2
Query: 434 HL*LPTLVFPVNFFSYVL*NNISWSMRPGRITLLRPFL 547
+L +LVFPVNFF YVL* N+S +M P RITLLRPFL
Sbjct: 41294 YLKFSSLVFPVNFFCYVL*YNVSRTMCPWRITLLRPFL 41407
Score = 55.6 bits (115), Expect(2) = 2e-037
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -3 / -1
Query: 545 GMA*GELSSLGAWTRIYCFKGHS*RSLQETQE 450
GMA*GELSS+G W+ I+C HS RSLQETQE
Sbjct: 41405 GMA*GELSSMGTWSGIHCITRHSKRSLQETQE 41310
Score = 28.6 bits (56), Expect(3) = 7e-054
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 577 DPYSKWYIT 551
DPYSKWYIT
Sbjct: 41660 DPYSKWYIT 41634
Score = 26.7 bits (52), Expect(3) = 3e-040
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 541 IPQGLCTTCY 570
+P GLCTTCY
Sbjct: 41624 LPLGLCTTCY 41653
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0525F01
Length = 151668
Score = 177 bits (380), Expect(3) = 7e-053
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = -1 / +1
Query: 442 LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQF 263
L+MFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCE+GYV+AHYQEPRDMMCLWD+F
Sbjct: 61684 LQMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEEGYVVAHYQEPRDMMCLWDKF 61863
Query: 262 QKTKRGTCCKE*QKS 218
KTKRGTCCKE*+ S
Sbjct: 61864 LKTKRGTCCKE*RGS 61908
Score = 137 bits (293), Expect(3) = 2e-039
Identities = 61/73 (83%), Positives = 63/73 (86%)
Frame = +3 / -2
Query: 228 YSLQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHI 407
YSLQHVPRFVF N S RHI+SLGSW* A T PSS PSTKILPSFSY TS PSFFISLIHI
Sbjct: 61898 YSLQHVPRFVFRNLSHRHIMSLGSW*CATTYPSSQPSTKILPSFSYFTSNPSFFISLIHI 61719
Query: 408 PIATSSSLNIFNS 446
PIATSSSLNI N+
Sbjct: 61718 PIATSSSLNICNT 61680
Score = 131 bits (281), Expect(2) = 7e-037
Identities = 50/73 (68%), Positives = 61/73 (83%)
Frame = -3 / +3
Query: 443 VKDVQAGGCRNGNMDQ*DEEGWLGCQV*E*WEDFG*RMRGWLCDCSLPRTKGYDVPLGSV 264
+ DVQ CRNGNMDQ*DEEGW+GC+V*+*WEDFG R+ G +C C+LP KG+DVP+G +
Sbjct: 61683 IADVQTRRCRNGNMDQ*DEEGWVGCKV*K*WEDFGRRL*GRICGCTLPGAKGHDVPMGQI 61862
Query: 263 SENKTRNMLQRIT 225
SENKTRNMLQ +T
Sbjct: 61863 SENKTRNMLQGVT 61901
Score = 62.0 bits (129), Expect(3) = 7e-053
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -1 / +3
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKM 434
AHGPGYIVS+DIAKEVYRKHK GELK+
Sbjct: 61428 AHGPGYIVSQDIAKEVYRKHKRGELKV 61508
Score = 57.9 bits (120), Expect(3) = 2e-039
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +2 / -2
Query: 434 HL*LPTLVFPVNFFSYVL*NNISWSMRPGRITLLRPFL 547
+L +LVFPVNFF YVL* N+S +M P RITLLRPFL
Sbjct: 61508 YLKFSSLVFPVNFFCYVL*YNVSRTMCPWRITLLRPFL 61395
Score = 55.6 bits (115), Expect(2) = 7e-037
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -3 / +2
Query: 545 GMA*GELSSLGAWTRIYCFKGHS*RSLQETQE 450
GMA*GELSS+G W+ I+C HS RSLQETQE
Sbjct: 61397 GMA*GELSSMGTWSGIHCITRHSKRSLQETQE 61492
Score = 28.6 bits (56), Expect(3) = 7e-053
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / +2
Query: 577 DPYSKWYIT 551
DPYSKWYIT
Sbjct: 61142 DPYSKWYIT 61168
Score = 26.7 bits (52), Expect(3) = 2e-039
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 541 IPQGLCTTCY 570
+P GLCTTCY
Sbjct: 61178 LPLGLCTTCY 61149
>ref|NT_079873.2| Oryza sativa (japonica cultivar-group)
Length = 5116111
Score = 177 bits (380), Expect(2) = 8e-051
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = -1 / +2
Query: 442 LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQF 263
L+MFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCE+GYV+AHYQEPRDMMCLWD+F
Sbjct: 2423585 LQMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEEGYVVAHYQEPRDMMCLWDKF 2423764
Query: 262 QKTKRGTCCKE*QKS 218
KTKRGTCCKE*+ S
Sbjct: 2423765 LKTKRGTCCKE*RGS 2423809
Score = 137 bits (293), Expect(2) = 1e-037
Identities = 61/73 (83%), Positives = 63/73 (86%)
Frame = +3 / -2
Query: 228 YSLQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHI 407
YSLQHVPRFVF N S RHI+SLGSW* A T PSS PSTKILPSFSY TS PSFFISLIHI
Sbjct: 2423799 YSLQHVPRFVFRNLSHRHIMSLGSW*CATTYPSSQPSTKILPSFSYFTSNPSFFISLIHI 2423620
Query: 408 PIATSSSLNIFNS 446
PIATSSSLNI N+
Sbjct: 2423619 PIATSSSLNICNT 2423581
Score = 131 bits (281), Expect(2) = 2e-035
Identities = 50/73 (68%), Positives = 61/73 (83%)
Frame = -3 / +1
Query: 443 VKDVQAGGCRNGNMDQ*DEEGWLGCQV*E*WEDFG*RMRGWLCDCSLPRTKGYDVPLGSV 264
+ DVQ CRNGNMDQ*DEEGW+GC+V*+*WEDFG R+ G +C C+LP KG+DVP+G +
Sbjct: 2423584 IADVQTRRCRNGNMDQ*DEEGWVGCKV*K*WEDFGRRL*GRICGCTLPGAKGHDVPMGQI 2423763
Query: 263 SENKTRNMLQRIT 225
SENKTRNMLQ +T
Sbjct: 2423764 SENKTRNMLQGVT 2423802
Score = 62.0 bits (129), Expect(2) = 8e-051
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -1 / +1
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKM 434
AHGPGYIVS+DIAKEVYRKHK GELK+
Sbjct: 2423329 AHGPGYIVSQDIAKEVYRKHKRGELKV 2423409
Score = 57.9 bits (120), Expect(2) = 1e-037
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +2 / -2
Query: 434 HL*LPTLVFPVNFFSYVL*NNISWSMRPGRITLLRPFL 547
+L +LVFPVNFF YVL* N+S +M P RITLLRPFL
Sbjct: 2423409 YLKFSSLVFPVNFFCYVL*YNVSRTMCPWRITLLRPFL 2423296
Score = 55.6 bits (115), Expect(2) = 2e-035
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -3 / +3
Query: 545 GMA*GELSSLGAWTRIYCFKGHS*RSLQETQE 450
GMA*GELSS+G W+ I+C HS RSLQETQE
Sbjct: 2423298 GMA*GELSSMGTWSGIHCITRHSKRSLQETQE 2423393
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 177 bits (380), Expect = 1e-042
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = -1 / +3
Query: 442 LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQF 263
L+MFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCE+GYV+AHYQEPRDMMCLWD+F
Sbjct: 9815775 LQMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEEGYVVAHYQEPRDMMCLWDKF 9815954
Query: 262 QKTKRGTCCKE*QKS 218
KTKRGTCCKE*+ S
Sbjct: 9815955 LKTKRGTCCKE*RGS 9815999
Score = 137 bits (293), Expect = 1e-030
Identities = 61/73 (83%), Positives = 63/73 (86%)
Frame = +3 / -1
Query: 228 YSLQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHI 407
YSLQHVPRFVF N S RHI+SLGSW* A T PSS PSTKILPSFSY TS PSFFISLIHI
Sbjct: 9815989 YSLQHVPRFVFRNLSHRHIMSLGSW*CATTYPSSQPSTKILPSFSYFTSNPSFFISLIHI 9815810
Query: 408 PIATSSSLNIFNS 446
PIATSSSLNI N+
Sbjct: 9815809 PIATSSSLNICNT 9815771
Score = 131 bits (281), Expect = 6e-029
Identities = 50/73 (68%), Positives = 61/73 (83%)
Frame = -3 / +2
Query: 443 VKDVQAGGCRNGNMDQ*DEEGWLGCQV*E*WEDFG*RMRGWLCDCSLPRTKGYDVPLGSV 264
+ DVQ CRNGNMDQ*DEEGW+GC+V*+*WEDFG R+ G +C C+LP KG+DVP+G +
Sbjct: 9815774 IADVQTRRCRNGNMDQ*DEEGWVGCKV*K*WEDFGRRL*GRICGCTLPGAKGHDVPMGQI 9815953
Query: 263 SENKTRNMLQRIT 225
SENKTRNMLQ +T
Sbjct: 9815954 SENKTRNMLQGVT 9815992
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 177 bits (380), Expect = 1e-042
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = -1 / +3
Query: 442 LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQF 263
L+MFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCE+GYV+AHYQEPRDMMCLWD+F
Sbjct: 17417781 LQMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEEGYVVAHYQEPRDMMCLWDKF 17417960
Query: 262 QKTKRGTCCKE*QKS 218
KTKRGTCCKE*+ S
Sbjct: 17417961 LKTKRGTCCKE*RGS 17418005
Score = 137 bits (293), Expect = 1e-030
Identities = 61/73 (83%), Positives = 63/73 (86%)
Frame = +3 / -1
Query: 228 YSLQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHI 407
YSLQHVPRFVF N S RHI+SLGSW* A T PSS PSTKILPSFSY TS PSFFISLIHI
Sbjct: 17417995 YSLQHVPRFVFRNLSHRHIMSLGSW*CATTYPSSQPSTKILPSFSYFTSNPSFFISLIHI 17417816
Query: 408 PIATSSSLNIFNS 446
PIATSSSLNI N+
Sbjct: 17417815 PIATSSSLNICNT 17417777
Score = 131 bits (281), Expect = 6e-029
Identities = 50/73 (68%), Positives = 61/73 (83%)
Frame = -3 / +2
Query: 443 VKDVQAGGCRNGNMDQ*DEEGWLGCQV*E*WEDFG*RMRGWLCDCSLPRTKGYDVPLGSV 264
+ DVQ CRNGNMDQ*DEEGW+GC+V*+*WEDFG R+ G +C C+LP KG+DVP+G +
Sbjct: 17417780 IADVQTRRCRNGNMDQ*DEEGWVGCKV*K*WEDFGRRL*GRICGCTLPGAKGHDVPMGQI 17417959
Query: 263 SENKTRNMLQRIT 225
SENKTRNMLQ +T
Sbjct: 17417960 SENKTRNMLQGVT 17417998
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 177 bits (380), Expect = 1e-042
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = -1 / +2
Query: 442 LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQF 263
L+MFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCE+GYV+AHYQEPRDMMCLWD+F
Sbjct: 6732005 LQMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEEGYVVAHYQEPRDMMCLWDKF 6732184
Query: 262 QKTKRGTCCKE*QKS 218
KTKRGTCCKE*+ S
Sbjct: 6732185 LKTKRGTCCKE*RGS 6732229
Score = 137 bits (293), Expect = 1e-030
Identities = 61/73 (83%), Positives = 63/73 (86%)
Frame = +3 / -1
Query: 228 YSLQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHI 407
YSLQHVPRFVF N S RHI+SLGSW* A T PSS PSTKILPSFSY TS PSFFISLIHI
Sbjct: 6732219 YSLQHVPRFVFRNLSHRHIMSLGSW*CATTYPSSQPSTKILPSFSYFTSNPSFFISLIHI 6732040
Query: 408 PIATSSSLNIFNS 446
PIATSSSLNI N+
Sbjct: 6732039 PIATSSSLNICNT 6732001
Score = 131 bits (281), Expect = 6e-029
Identities = 50/73 (68%), Positives = 61/73 (83%)
Frame = -3 / +1
Query: 443 VKDVQAGGCRNGNMDQ*DEEGWLGCQV*E*WEDFG*RMRGWLCDCSLPRTKGYDVPLGSV 264
+ DVQ CRNGNMDQ*DEEGW+GC+V*+*WEDFG R+ G +C C+LP KG+DVP+G +
Sbjct: 6732004 IADVQTRRCRNGNMDQ*DEEGWVGCKV*K*WEDFGRRL*GRICGCTLPGAKGHDVPMGQI 6732183
Query: 263 SENKTRNMLQRIT 225
SENKTRNMLQ +T
Sbjct: 6732184 SENKTRNMLQGVT 6732222
>ref|XM_466403.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1866
Score = 155 bits (334), Expect = 3e-036
Identities = 57/93 (61%), Positives = 74/93 (79%)
Frame = -1 / +1
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 335
AHGPGY+VS+DIAKE+ +++ LKMFKLEDVAMGIWI EMKK GL V+Y+ D RI +
Sbjct: 1582 AHGPGYVVSQDIAKEINSWYETSHLKMFKLEDVAMGIWIAEMKKGGLPVQYKTDERINSD 1761
Query: 334 GCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCC 236
GC DG ++AHYQEPR M+C+W++ +T + TCC
Sbjct: 1762 GCNDGCIVAHYQEPRHMLCMWEKLLRTNQATCC 1860
Score = 119 bits (254), Expect = 3e-025
Identities = 61/114 (53%), Positives = 66/114 (57%)
Frame = +3 / -2
Query: 234 LQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHIPI 413
LQHV FV + S H + LGSW**A PS PS IL S Y T P FFIS IHIPI
Sbjct: 1862 LQHVA*FVLRSFSHMHSMCLGSW**ATMHPSLQPSLLILSSVLYWTGNPPFFISAIHIPI 1683
Query: 414 ATSSSLNIFNSPLLCFL*TSLAMSFETIYPGPCAQXXXXXXXXXXXVMYHLLYG 575
ATSSSLNIF + L S AMS +T YPGPCA +MYHLL G
Sbjct: 1682 ATSSSLNIFK*LVSYQLLISFAMSCDTTYPGPCAHGGYFSSGHSSGLMYHLLSG 1521
>dbj|AK101169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028K02, full
insert sequence
Length = 2095
Score = 142 bits (304), Expect = 4e-032
Identities = 54/94 (57%), Positives = 66/94 (70%)
Frame = -1 / +2
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 335
AHGPGYIVS+DIAK + H+ L++FKLEDVAMGIWI + K G V Y ND R E
Sbjct: 1574 AHGPGYIVSRDIAKFIVHGHQERTLQLFKLEDVAMGIWIQQYKNSGQKVNYVNDDRFYSE 1753
Query: 334 GCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCK 233
GC+ YV+AHYQ PR MMCLW++ QK + CC+
Sbjct: 1754 GCDSDYVLAHYQSPRLMMCLWEKLQKEYQPVCCE 1855
>gb|AACV01004761.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004761, whole
genome shotgun sequence
Length = 29879
Score = 118 bits (253), Expect(2) = 2e-030
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = -1 / -2
Query: 442 LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQF 263
++MFKLEDVAMGIWI EMKK GL V+Y+ D RI +GC DG ++AHYQEPR M+C+W++
Sbjct: 7243 MQMFKLEDVAMGIWIAEMKKGGLPVQYKTDERINSDGCNDGCIVAHYQEPRHMLCMWEKL 7064
Query: 262 QKTKRGTCC 236
+T + TCC
Sbjct: 7063 LRTNQATCC 7037
Score = 44.6 bits (91), Expect(2) = 2e-030
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -1 / -3
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMF 431
AHGPGY+VS+DIAKE+ +++ LK+F
Sbjct: 7557 AHGPGYVVSQDIAKEINSWYETSHLKVF 7474
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:B1342F01
Length = 153287
Score = 118 bits (253), Expect(2) = 9e-030
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = -1 / +3
Query: 442 LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQF 263
++MFKLEDVAMGIWI EMKK GL V+Y+ D RI +GC DG ++AHYQEPR M+C+W++
Sbjct: 93726 MQMFKLEDVAMGIWIAEMKKGGLPVQYKTDERINSDGCNDGCIVAHYQEPRHMLCMWEKL 93905
Query: 262 QKTKRGTCC 236
+T + TCC
Sbjct: 93906 LRTNQATCC 93932
Score = 44.6 bits (91), Expect(2) = 9e-030
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -1 / +1
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMF 431
AHGPGY+VS+DIAKE+ +++ LK+F
Sbjct: 93412 AHGPGYVVSQDIAKEINSWYETSHLKVF 93495
>ref|NT_107180.1| Oryza sativa (japonica cultivar-group)
Length = 6019143
Score = 118 bits (253), Expect(2) = 3e-028
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = -1 / +2
Query: 442 LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQF 263
++MFKLEDVAMGIWI EMKK GL V+Y+ D RI +GC DG ++AHYQEPR M+C+W++
Sbjct: 3382124 MQMFKLEDVAMGIWIAEMKKGGLPVQYKTDERINSDGCNDGCIVAHYQEPRHMLCMWEKL 3382303
Query: 262 QKTKRGTCC 236
+T + TCC
Sbjct: 3382304 LRTNQATCC 3382330
Score = 44.6 bits (91), Expect(2) = 3e-028
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -1 / +3
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMF 431
AHGPGY+VS+DIAKE+ +++ LK+F
Sbjct: 3381810 AHGPGYVVSQDIAKEINSWYETSHLKVF 3381893
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 118 bits (253), Expect = 4e-025
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = -1 / +2
Query: 442 LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQF 263
++MFKLEDVAMGIWI EMKK GL V+Y+ D RI +GC DG ++AHYQEPR M+C+W++
Sbjct: 8550917 MQMFKLEDVAMGIWIAEMKKGGLPVQYKTDERINSDGCNDGCIVAHYQEPRHMLCMWEKL 8551096
Query: 262 QKTKRGTCC 236
+T + TCC
Sbjct: 8551097 LRTNQATCC 8551123
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 118 bits (253), Expect = 4e-025
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = -1 / +1
Query: 442 LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQF 263
++MFKLEDVAMGIWI EMKK GL V+Y+ D RI +GC DG ++AHYQEPR M+C+W++
Sbjct: 22003981 MQMFKLEDVAMGIWIAEMKKGGLPVQYKTDERINSDGCNDGCIVAHYQEPRHMLCMWEKL 22004160
Query: 262 QKTKRGTCC 236
+T + TCC
Sbjct: 22004161 LRTNQATCC 22004187
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 118 bits (253), Expect = 4e-025
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = -1 / +3
Query: 442 LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQF 263
++MFKLEDVAMGIWI EMKK GL V+Y+ D RI +GC DG ++AHYQEPR M+C+W++
Sbjct: 22197882 MQMFKLEDVAMGIWIAEMKKGGLPVQYKTDERINSDGCNDGCIVAHYQEPRHMLCMWEKL 22198061
Query: 262 QKTKRGTCC 236
+T + TCC
Sbjct: 22198062 LRTNQATCC 22198088
>gb|AACV01000929.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000929, whole
genome shotgun sequence
Length = 64865
Score = 106 bits (226), Expect(2) = 4e-022
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1 / +1
Query: 439 KMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQ 260
++FKLEDVAMGIWI + K G V Y ND R EGC+ YV+AHYQ PR MMCLW++ Q
Sbjct: 48250 QLFKLEDVAMGIWIQQYKNSGQKVNYVNDDRFYSEGCDSDYVLAHYQSPRLMMCLWEKLQ 48429
Query: 259 KTKRGTCCK 233
K + CC+
Sbjct: 48430 KEYQPVCCE 48456
Score = 29.9 bits (59), Expect(2) = 4e-022
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3 / +3
Query: 545 GMA*GELSSLGAWTRIYCFKGH 480
GMA +S++G+W IY KGH
Sbjct: 48039 GMAC*SISTMGSWPWIYSLKGH 48104
>gb|CV730758.1|CV730758 FLO--04-H15.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--04-H15,
mRNA sequence
Length = 497
Score = 107 bits (229), Expect = 8e-022
Identities = 43/114 (37%), Positives = 63/114 (55%)
Frame = -1 / +1
Query: 565 KWYITXXXXXXXXXXXWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMK 386
KW +T +A+GPGY++S DIA+ + + + L++FK+EDV MG+W+ +
Sbjct: 103 KWAVTYEEWPEEAYPNYANGPGYVISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 282
Query: 385 KDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*Q 224
V+Y +D R GC DGY AHYQ P+ M+CLW + Q C *Q
Sbjct: 283 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR*Q 444
>dbj|AK064329.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F09, full
insert sequence
Length = 1932
Score = 107 bits (229), Expect = 8e-022
Identities = 43/114 (37%), Positives = 63/114 (55%)
Frame = -1 / +2
Query: 565 KWYITXXXXXXXXXXXWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMK 386
KW +T +A+GPGY++S DIA+ + + + L++FK+EDV MG+W+ +
Sbjct: 1157 KWAVTYEEWPEEAYPNYANGPGYVISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 1336
Query: 385 KDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*Q 224
V+Y +D R GC DGY AHYQ P+ M+CLW + Q C *Q
Sbjct: 1337 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR*Q 1498
>dbj|AK100100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004E20, full
insert sequence
Length = 2443
Score = 107 bits (229), Expect = 8e-022
Identities = 43/114 (37%), Positives = 63/114 (55%)
Frame = -1 / +2
Query: 565 KWYITXXXXXXXXXXXWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMK 386
KW +T +A+GPGY++S DIA+ + + + L++FK+EDV MG+W+ +
Sbjct: 1691 KWAVTYEEWPEEAYPNYANGPGYVISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 1870
Query: 385 KDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*Q 224
V+Y +D R GC DGY AHYQ P+ M+CLW + Q C *Q
Sbjct: 1871 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR*Q 2032
>ref|XM_476977.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2439
Score = 107 bits (229), Expect = 8e-022
Identities = 43/114 (37%), Positives = 63/114 (55%)
Frame = -1 / +1
Query: 565 KWYITXXXXXXXXXXXWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMK 386
KW +T +A+GPGY++S DIA+ + + + L++FK+EDV MG+W+ +
Sbjct: 1687 KWAVTYEEWPEEAYPNYANGPGYVISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 1866
Query: 385 KDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*Q 224
V+Y +D R GC DGY AHYQ P+ M+CLW + Q C *Q
Sbjct: 1867 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR*Q 2028
>ref|XM_506213.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1715_A07.12 mRNA
Length = 2443
Score = 107 bits (229), Expect = 8e-022
Identities = 43/114 (37%), Positives = 63/114 (55%)
Frame = -1 / +2
Query: 565 KWYITXXXXXXXXXXXWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMK 386
KW +T +A+GPGY++S DIA+ + + + L++FK+EDV MG+W+ +
Sbjct: 1691 KWAVTYEEWPEEAYPNYANGPGYVISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 1870
Query: 385 KDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*Q 224
V+Y +D R GC DGY AHYQ P+ M+CLW + Q C *Q
Sbjct: 1871 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR*Q 2032
>ref|XM_506214.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1715_A07.12 mRNA
Length = 1935
Score = 107 bits (229), Expect = 8e-022
Identities = 43/114 (37%), Positives = 63/114 (55%)
Frame = -1 / +2
Query: 565 KWYITXXXXXXXXXXXWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMK 386
KW +T +A+GPGY++S DIA+ + + + L++FK+EDV MG+W+ +
Sbjct: 1160 KWAVTYEEWPEEAYPNYANGPGYVISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 1339
Query: 385 KDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*Q 224
V+Y +D R GC DGY AHYQ P+ M+CLW + Q C *Q
Sbjct: 1340 NTLRPVEYRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR*Q 1501
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0554D10
Length = 158723
Score = 106 bits (226), Expect(2) = 9e-022
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1 / -1
Query: 439 KMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQ 260
++FKLEDVAMGIWI + K G V Y ND R EGC+ YV+AHYQ PR MMCLW++ Q
Sbjct: 17723 QLFKLEDVAMGIWIQQYKNSGQKVNYVNDDRFYSEGCDSDYVLAHYQSPRLMMCLWEKLQ 17544
Query: 259 KTKRGTCCK 233
K + CC+
Sbjct: 17543 KEYQPVCCE 17517
Score = 29.9 bits (59), Expect(2) = 9e-022
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 545 GMA*GELSSLGAWTRIYCFKGH 480
GMA +S++G+W IY KGH
Sbjct: 17934 GMAC*SISTMGSWPWIYSLKGH 17869
>ref|XM_469993.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1956
Score = 107 bits (228), Expect = 1e-021
Identities = 39/102 (38%), Positives = 61/102 (59%)
Frame = -1 / +1
Query: 565 KWYITXXXXXXXXXXXWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMK 386
KW ++ +A+GPGY++S DIA+ + + + L++FK+EDV+MG+W+ +
Sbjct: 1618 KWSVSYEEWQEEVYPPYANGPGYVISSDIAQYIVSEFDNQTLRLFKMEDVSMGMWVEKFN 1797
Query: 385 KDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQ 260
VKY +D + GC DGY AHYQ P+ M+CLW + Q
Sbjct: 1798 STRQPVKYSHDVKFFQSGCFDGYYTAHYQSPQQMICLWRKLQ 1923
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 106 bits (226), Expect = 2e-021
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1 / -2
Query: 439 KMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQ 260
++FKLEDVAMGIWI + K G V Y ND R EGC+ YV+AHYQ PR MMCLW++ Q
Sbjct: 12648476 QLFKLEDVAMGIWIQQYKNSGQKVNYVNDDRFYSEGCDSDYVLAHYQSPRLMMCLWEKLQ 12648297
Query: 259 KTKRGTCCK 233
K + CC+
Sbjct: 12648296 KEYQPVCCE 12648270
>ref|NT_079961.2| Oryza sativa (japonica cultivar-group)
Length = 3480660
Score = 106 bits (226), Expect = 2e-021
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1 / -3
Query: 439 KMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQ 260
++FKLEDVAMGIWI + K G V Y ND R EGC+ YV+AHYQ PR MMCLW++ Q
Sbjct: 1157701 QLFKLEDVAMGIWIQQYKNSGQKVNYVNDDRFYSEGCDSDYVLAHYQSPRLMMCLWEKLQ 1157522
Query: 259 KTKRGTCCK 233
K + CC+
Sbjct: 1157521 KEYQPVCCE 1157495
>gb|CH401165.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000002
genomic scaffold, whole genome shotgun sequence
Length = 5008528
Score = 106 bits (226), Expect = 2e-021
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1 / -3
Query: 439 KMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQ 260
++FKLEDVAMGIWI + K G V Y ND R EGC+ YV+AHYQ PR MMCLW++ Q
Sbjct: 989987 QLFKLEDVAMGIWIQQYKNSGQKVNYVNDDRFYSEGCDSDYVLAHYQSPRLMMCLWEKLQ 989808
Query: 259 KTKRGTCCK 233
K + CC+
Sbjct: 989807 KEYQPVCCE 989781
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 106 bits (226), Expect = 2e-021
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1 / -2
Query: 439 KMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQ 260
++FKLEDVAMGIWI + K G V Y ND R EGC+ YV+AHYQ PR MMCLW++ Q
Sbjct: 12606482 QLFKLEDVAMGIWIQQYKNSGQKVNYVNDDRFYSEGCDSDYVLAHYQSPRLMMCLWEKLQ 12606303
Query: 259 KTKRGTCCK 233
K + CC+
Sbjct: 12606302 KEYQPVCCE 12606276
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 106 bits (226), Expect = 2e-021
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1 / -1
Query: 439 KMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQ 260
++FKLEDVAMGIWI + K G V Y ND R EGC+ YV+AHYQ PR MMCLW++ Q
Sbjct: 12650694 QLFKLEDVAMGIWIQQYKNSGQKVNYVNDDRFYSEGCDSDYVLAHYQSPRLMMCLWEKLQ 12650515
Query: 259 KTKRGTCCK 233
K + CC+
Sbjct: 12650514 KEYQPVCCE 12650488
>dbj|AK101244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032A07, full
insert sequence
Length = 2439
Score = 105 bits (225), Expect = 3e-021
Identities = 42/114 (36%), Positives = 63/114 (55%)
Frame = -1 / +1
Query: 565 KWYITXXXXXXXXXXXWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMK 386
KW +T +A+GPGY++S DIA+ + + + L++FK+EDV MG+W+ +
Sbjct: 1687 KWAVTYEEWPEEAYPNYANGPGYVISADIARYIVSEFDNQTLRLFKMEDVNMGMWVEKFN 1866
Query: 385 KDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*Q 224
V++ +D R GC DGY AHYQ P+ M+CLW + Q C *Q
Sbjct: 1867 NTLRPVEFRHDVRFYQSGCFDGYFTAHYQSPQHMICLWRKLQSGSSRCCNVR*Q 2028
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,001,896,390
Number of Sequences: 438736
Number of extensions: 57503216
Number of successful extensions: 222090
Number of sequences better than 1.0e-020: 41
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 120767540061
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)