TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCG16f05.yg.2.1
(585 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK072330.1| Oryza sativa (japonica cultivar-group) cDNA... 279 2e-073
ref|NM_191264.1| Oryza sativa (japonica cultivar-group), p... 279 2e-073
gb|AACV01002365.1| Oryza sativa (japonica cultivar-group) c... 85 2e-054
dbj|AP003268.4| Oryza sativa (japonica cultivar-group) geno... 85 2e-051
dbj|AP003249.3| Oryza sativa (japonica cultivar-group) geno... 85 2e-051
dbj|AK067927.1| Oryza sativa (japonica cultivar-group) cDNA... 195 3e-048
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 85 1e-045
gb|CB000680.1|CB000680 S345J_F06 Rice cold stress germinati... 160 9e-038
gb|CA999797.1|CA999797 S234J_D11 Rice cold stress germinati... 147 9e-034
ref|NM_191956.1| Oryza sativa (japonica cultivar-group), p... 146 2e-033
gb|AQ796174.1|AQ796174 nbxb0062L17r CUGI Rice BAC Library O... 72 7e-032
gb|AACV01012559.1| Oryza sativa (japonica cultivar-group) c... 68 2e-029
gb|AC132485.2| Oryza sativa (japonica cultivar-group) chrom... 68 6e-027
gb|CF305577.1|CF305577 HDA1--01-B17.g1 OsHDAC1-overexpressi... 100 7e-025
ref|NT_107217.1| Oryza sativa (japonica cultivar-group) 68 1e-024
dbj|AK058446.1| Oryza sativa (japonica cultivar-group) cDNA... 110 2e-022
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 68 3e-022
>dbj|AK072330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039P13, full
insert sequence
Length = 2944
Score = 279 bits (604), Expect = 2e-073
Identities = 112/190 (58%), Positives = 135/190 (71%)
Frame = -1 / +2
Query: 585 VNKXXXXXXXXVLXXXGDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKN 406
VNK VL GD G LG A Q KN +F+ F+S+S+K +L+AVADSLK+
Sbjct: 1088 VNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSLKH 1267
Query: 405 RSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERRSGVVVRISE 226
SVFHI YNPRATASEY++PY KF+KS NHPVCIG R F +EDV+ERRSG++ +SE
Sbjct: 1268 GSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNERRSGMIAGVSE 1447
Query: 225 IDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIEIXXXXXXXXXXXXXXXSKRTKLCP 46
+DP++WPGSKWRSLLVRWED +CN Q+RVSPWEIEI SKRTKLCP
Sbjct: 1448 VDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSKRTKLCP 1627
Query: 45 QGNLDVPAMW 16
QGNLDVPA++
Sbjct: 1628 QGNLDVPALY 1657
Score = 198 bits (426), Expect = 6e-049
Identities = 102/189 (53%), Positives = 110/189 (58%)
Frame = +3 / -3
Query: 18 TLLERPNFPEDTTWFF*N*MQKGNEKQRQNHQLSRFPMEILYLGHYIQHRPPILPAGFST 197
T L RPN PE WFF*N M NE+QR NHQLS+ PMEILY G Q PPI P GFST
Sbjct: 1655 TELARPNCPEGIIWFF*NWMPTENEQQRLNHQLSQSPMEILYFGCCSQ*HPPIEPEGFST 1476
Query: 198 SSQAISWDLFH*CEQPLQIAFH*HLHYGTES*SLLQYRLDD*GSSGT*RME*YILKQ*LL 377
+QAI W L H* Q Q A H*HLH E+*+ QY+LD * S T ME KQ* L
Sbjct: 1475 LNQAI*WGLLH*HRQSFQNASH*HLHSQNET*TSFQYKLDG*SFSRTSNMEQRTQKQ*PL 1296
Query: 378 DCKKCEKHFCSSRNQLQPSKNAALCCHY*NLQKGXHFXAE*XXAHPXXXHXHHXXXXTXX 557
C KCEKHF SRNQ QP+ A+L Y* L K HF AE* HP H HH T
Sbjct: 1295 GCNKCEKHFHVSRNQPQPTVCASLNFRY*KL*KSLHF*AE*LFEHPILAHHHHPGEITPR 1116
Query: 558 XLXXXXFY* 584
L FY*
Sbjct: 1115 PLRPVSFY* 1089
Score = 193 bits (416), Expect = 1e-047
Identities = 103/189 (54%), Positives = 117/189 (61%)
Frame = -2 / +3
Query: 584 SIKXXXXQXXXCXXXXVMXVXXXWVXXXLFSXKMXPFLKISIVTAQSGIL*RL*LIP*RT 405
SIK Q C VM V WV L S KM F K+ + Q RL LIP*
Sbjct: 1089 SIKRNWSQGTRCYFSGVMMVS*DWVFEELLSLKMKRFSKLLVAKVQRCAHCRLWLIP*NM 1268
Query: 404 EVFFTFLTIQELLLQNILFHTLSS*RASIIQSVLEQGSTFSAIMKMLVKGDLEWLFALVK 225
EVFFTF+T Q LLL + LFH SS*+AS IQ VLE GS+F +KML++G LE L LVK
Sbjct: 1269 EVFFTFVTTQGLLLLSTLFHIGSS*KASTIQFVLE*GSSFILRVKMLMRGVLE*LPVLVK 1448
Query: 224 *IP*NGLARSGEACW*DGRTVLNVMAKIEYLHGKSR*LVVLSLFLIPFLHLVLKEPSCVL 45
* P +GL +SGEA W DGR +L AKIEYLHG+ R*LVV SL LI H VLKEP+ L
Sbjct: 1449 *TPSDGLVQSGEAFWFDGRMLLTATAKIEYLHGRLR*LVVQSLLLILCRHPVLKEPNYAL 1628
Query: 44 REIWTFQQC 18
R IWT Q C
Sbjct: 1629 RAIWTCQLC 1655
Score = 188 bits (405), Expect = 5e-046
Identities = 92/166 (55%), Positives = 113/166 (68%)
Frame = -3 / +1
Query: 514 GXAXXYSAXKXXPF*RFQ**QHKAAFFDGCS*FLEEQKCFSHFLQSKSYCFRIYYSIR*V 335
G + YSA K F F * + K A GC *FLE KCFSH LQ K YCF + SI V
Sbjct: 1159 GCSKSYSA*K*SDFQSF**RKFKDAHTVGCG*FLETWKCFSHLLQPKGYCF*VRCSILEV 1338
Query: 334 PEEPQSSSLYWSKDQLSVP**RC**KAIWSGCSH**NRSHEMAWLEVEKPAGKMGGRC*M 155
E+ Q SSLYW++ Q+S *RC**+A W+ C **+R H+MAW +VEKP+G MGG *+
Sbjct: 1339 REKLQPSSLYWNEVQVSF*E*RC**EAFWNDCRC**SRPHQMAWFKVEKPSGSMGGCY*L 1518
Query: 154 *WPR*SISMGNRDSWWFCLCFSFPFCI*F*KNQVVSSGKFGRSSNV 17
P+*SISMG+ DSWWF LC SF I F*KNQ++ SG+FGR+S+V
Sbjct: 1519 QQPK*SISMGD*DSWWFNLCCSFSVGIQF*KNQIMPSGQFGRASSV 1656
Score = 164 bits (353), Expect(2) = 4e-048
Identities = 64/105 (60%), Positives = 81/105 (77%)
Frame = +1 / -1
Query: 25 WNVQISLRTQLGSFRTRCRKGMRNRDRTTSYLDFPWRYSILAITFSTVLPSYQQASPLRA 204
W+VQI+LR GSFRT CR+ M NRD TT+YL+ PWRYSILA+ S++LPS Q+ASPL
Sbjct: 1648 WHVQIALRA*FGSFRTGCRQRMSNRD*TTNYLNLPWRYSILAVAVSSILPSNQKASPL*T 1469
Query: 205 RPFHGIYFTNANNHSRSPFTNIFIMALKVDPCSNTDWMIEALQEL 339
RP G+YFTN NHSR+P NIF + +K++P SNT+WM+EA EL
Sbjct: 1468 RPSDGVYFTNTGNHSRTPLINIFTLKMKLEPHSNTNWMVEAFHEL 1334
Score = 163 bits (351), Expect(2) = 1e-040
Identities = 77/108 (71%), Positives = 80/108 (74%)
Frame = +2 / -2
Query: 107 PPAISISHGDTLSWPLHSAPSSHLTSRLLHFEPGHFMGSISLMRTTTPDRLSLTSSLWH* 286
PP ISISHGDTL W L S SSH T RLLHFEPGH MGS SL P+RLSLTSSL *
Sbjct: 1566 PPTISISHGDTLFWLLQSVASSHRTRRLLHFEPGHLMGSTSLTPAIIPERLSLTSSLSK* 1387
Query: 287 KLILAPIQTG*LRLFRNLAYGIIYSEAVALGL*EM*KTLLFFKESATA 430
L L PIQTG L+LF N YG YSEAVALGL*+M*KTL FKESATA
Sbjct: 1386 NLNLIPIQTGWLKLFTNFQYGTTYSEAVALGL*QM*KTLPCFKESATA 1243
Score = 51.0 bits (105), Expect(2) = 4e-048
Identities = 29/66 (43%), Positives = 34/66 (51%)
Frame = +1 / -1
Query: 388 NVKNTSVLQGISYSRQRMPLCAVTIEIFKKGXIFXLNSXXXTQXXXTXITXXX*HXXXXX 567
NVKNTS+ QGIS+SRQ L + F+ IF L+S TQ T IT *H
Sbjct: 1285 NVKNTSMFQGISHSRQCAHL*TFATKSFENRFIFKLSSSSNTQS*LTIITPEK*HRVP*D 1106
Query: 568 XXXFID 585
FID
Sbjct: 1105 QFLFID 1088
Score = 26.7 bits (52), Expect(2) = 1e-040
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 23 AGTSKFP*GHN 55
AGTSK P*GHN
Sbjct: 1650 AGTSKLP*GHN 1618
>ref|NM_191264.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1758
Score = 279 bits (604), Expect = 2e-073
Identities = 112/190 (58%), Positives = 135/190 (71%)
Frame = -1 / +1
Query: 585 VNKXXXXXXXXVLXXXGDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKN 406
VNK VL GD G LG A Q KN +F+ F+S+S+K +L+AVADSLK+
Sbjct: 619 VNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSLKH 798
Query: 405 RSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERRSGVVVRISE 226
SVFHI YNPRATASEY++PY KF+KS NHPVCIG R F +EDV+ERRSG++ +SE
Sbjct: 799 GSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNERRSGMIAGVSE 978
Query: 225 IDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIEIXXXXXXXXXXXXXXXSKRTKLCP 46
+DP++WPGSKWRSLLVRWED +CN Q+RVSPWEIEI SKRTKLCP
Sbjct: 979 VDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSKRTKLCP 1158
Query: 45 QGNLDVPAMW 16
QGNLDVPA++
Sbjct: 1159 QGNLDVPALY 1188
Score = 198 bits (426), Expect = 6e-049
Identities = 102/189 (53%), Positives = 110/189 (58%)
Frame = +3 / -3
Query: 18 TLLERPNFPEDTTWFF*N*MQKGNEKQRQNHQLSRFPMEILYLGHYIQHRPPILPAGFST 197
T L RPN PE WFF*N M NE+QR NHQLS+ PMEILY G Q PPI P GFST
Sbjct: 1186 TELARPNCPEGIIWFF*NWMPTENEQQRLNHQLSQSPMEILYFGCCSQ*HPPIEPEGFST 1007
Query: 198 SSQAISWDLFH*CEQPLQIAFH*HLHYGTES*SLLQYRLDD*GSSGT*RME*YILKQ*LL 377
+QAI W L H* Q Q A H*HLH E+*+ QY+LD * S T ME KQ* L
Sbjct: 1006 LNQAI*WGLLH*HRQSFQNASH*HLHSQNET*TSFQYKLDG*SFSRTSNMEQRTQKQ*PL 827
Query: 378 DCKKCEKHFCSSRNQLQPSKNAALCCHY*NLQKGXHFXAE*XXAHPXXXHXHHXXXXTXX 557
C KCEKHF SRNQ QP+ A+L Y* L K HF AE* HP H HH T
Sbjct: 826 GCNKCEKHFHVSRNQPQPTVCASLNFRY*KL*KSLHF*AE*LFEHPILAHHHHPGEITPR 647
Query: 558 XLXXXXFY* 584
L FY*
Sbjct: 646 PLRPVSFY* 620
Score = 193 bits (416), Expect = 1e-047
Identities = 103/189 (54%), Positives = 117/189 (61%)
Frame = -2 / +2
Query: 584 SIKXXXXQXXXCXXXXVMXVXXXWVXXXLFSXKMXPFLKISIVTAQSGIL*RL*LIP*RT 405
SIK Q C VM V WV L S KM F K+ + Q RL LIP*
Sbjct: 620 SIKRNWSQGTRCYFSGVMMVS*DWVFEELLSLKMKRFSKLLVAKVQRCAHCRLWLIP*NM 799
Query: 404 EVFFTFLTIQELLLQNILFHTLSS*RASIIQSVLEQGSTFSAIMKMLVKGDLEWLFALVK 225
EVFFTF+T Q LLL + LFH SS*+AS IQ VLE GS+F +KML++G LE L LVK
Sbjct: 800 EVFFTFVTTQGLLLLSTLFHIGSS*KASTIQFVLE*GSSFILRVKMLMRGVLE*LPVLVK 979
Query: 224 *IP*NGLARSGEACW*DGRTVLNVMAKIEYLHGKSR*LVVLSLFLIPFLHLVLKEPSCVL 45
* P +GL +SGEA W DGR +L AKIEYLHG+ R*LVV SL LI H VLKEP+ L
Sbjct: 980 *TPSDGLVQSGEAFWFDGRMLLTATAKIEYLHGRLR*LVVQSLLLILCRHPVLKEPNYAL 1159
Query: 44 REIWTFQQC 18
R IWT Q C
Sbjct: 1160 RAIWTCQLC 1186
Score = 188 bits (405), Expect = 5e-046
Identities = 92/166 (55%), Positives = 113/166 (68%)
Frame = -3 / +3
Query: 514 GXAXXYSAXKXXPF*RFQ**QHKAAFFDGCS*FLEEQKCFSHFLQSKSYCFRIYYSIR*V 335
G + YSA K F F * + K A GC *FLE KCFSH LQ K YCF + SI V
Sbjct: 690 GCSKSYSA*K*SDFQSF**RKFKDAHTVGCG*FLETWKCFSHLLQPKGYCF*VRCSILEV 869
Query: 334 PEEPQSSSLYWSKDQLSVP**RC**KAIWSGCSH**NRSHEMAWLEVEKPAGKMGGRC*M 155
E+ Q SSLYW++ Q+S *RC**+A W+ C **+R H+MAW +VEKP+G MGG *+
Sbjct: 870 REKLQPSSLYWNEVQVSF*E*RC**EAFWNDCRC**SRPHQMAWFKVEKPSGSMGGCY*L 1049
Query: 154 *WPR*SISMGNRDSWWFCLCFSFPFCI*F*KNQVVSSGKFGRSSNV 17
P+*SISMG+ DSWWF LC SF I F*KNQ++ SG+FGR+S+V
Sbjct: 1050 QQPK*SISMGD*DSWWFNLCCSFSVGIQF*KNQIMPSGQFGRASSV 1187
Score = 164 bits (353), Expect(2) = 4e-048
Identities = 64/105 (60%), Positives = 81/105 (77%)
Frame = +1 / -1
Query: 25 WNVQISLRTQLGSFRTRCRKGMRNRDRTTSYLDFPWRYSILAITFSTVLPSYQQASPLRA 204
W+VQI+LR GSFRT CR+ M NRD TT+YL+ PWRYSILA+ S++LPS Q+ASPL
Sbjct: 1179 WHVQIALRA*FGSFRTGCRQRMSNRD*TTNYLNLPWRYSILAVAVSSILPSNQKASPL*T 1000
Query: 205 RPFHGIYFTNANNHSRSPFTNIFIMALKVDPCSNTDWMIEALQEL 339
RP G+YFTN NHSR+P NIF + +K++P SNT+WM+EA EL
Sbjct: 999 RPSDGVYFTNTGNHSRTPLINIFTLKMKLEPHSNTNWMVEAFHEL 865
Score = 163 bits (351), Expect(2) = 1e-040
Identities = 77/108 (71%), Positives = 80/108 (74%)
Frame = +2 / -2
Query: 107 PPAISISHGDTLSWPLHSAPSSHLTSRLLHFEPGHFMGSISLMRTTTPDRLSLTSSLWH* 286
PP ISISHGDTL W L S SSH T RLLHFEPGH MGS SL P+RLSLTSSL *
Sbjct: 1097 PPTISISHGDTLFWLLQSVASSHRTRRLLHFEPGHLMGSTSLTPAIIPERLSLTSSLSK* 918
Query: 287 KLILAPIQTG*LRLFRNLAYGIIYSEAVALGL*EM*KTLLFFKESATA 430
L L PIQTG L+LF N YG YSEAVALGL*+M*KTL FKESATA
Sbjct: 917 NLNLIPIQTGWLKLFTNFQYGTTYSEAVALGL*QM*KTLPCFKESATA 774
Score = 51.0 bits (105), Expect(2) = 4e-048
Identities = 29/66 (43%), Positives = 34/66 (51%)
Frame = +1 / -1
Query: 388 NVKNTSVLQGISYSRQRMPLCAVTIEIFKKGXIFXLNSXXXTQXXXTXITXXX*HXXXXX 567
NVKNTS+ QGIS+SRQ L + F+ IF L+S TQ T IT *H
Sbjct: 816 NVKNTSMFQGISHSRQCAHL*TFATKSFENRFIFKLSSSSNTQS*LTIITPEK*HRVP*D 637
Query: 568 XXXFID 585
FID
Sbjct: 636 QFLFID 619
Score = 26.7 bits (52), Expect(2) = 1e-040
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 23 AGTSKFP*GHN 55
AGTSK P*GHN
Sbjct: 1181 AGTSKLP*GHN 1149
>gb|AACV01002365.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002365, whole
genome shotgun sequence
Length = 14103
Score = 85.4 bits (180), Expect(4) = 2e-054
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = -1 / -1
Query: 180 VRWEDGAECNGQDRVSPWEIEIXXXXXXXXXXXXXXXSKRTKLCPQGNLDVPAM 19
VRWED +CN Q+RVSPWEIEI SKRTKLCPQGNLDVPA+
Sbjct: 4434 VRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSKRTKLCPQGNLDVPAL 4273
Score = 85.4 bits (180), Expect(4) = 2e-046
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +1 / +1
Query: 7 IPIPHCWNVQISLRTQLGSFRTRCRKGMRNRDRTTSYLDFPWRYSILAITFSTVLPS 177
+ + W+VQI+LR GSFRT CR+ M NRD TT+YL+ PWRYSILA+ S++LPS
Sbjct: 4261 LELTQSWHVQIALRA*FGSFRTGCRQRMSNRD*TTNYLNLPWRYSILAVAVSSILPS 4431
Score = 76.2 bits (160), Expect(4) = 7e-033
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = -3 / -3
Query: 181 GKMGGRC*M*WPR*SISMGNRDSWWFCLCFSFPFCI*F*KNQVVSSGKFGRSSNV 17
G MGG *+ P+*SISMG+ DSWWF LC SF I F*KNQ++ SG+FGR+S+V
Sbjct: 4435 GSMGGCY*LQQPK*SISMGD*DSWWFNLCCSFSVGIQF*KNQIMPSGQFGRASSV 4271
Score = 74.8 bits (157), Expect(4) = 1e-031
Identities = 34/55 (61%), Positives = 36/55 (65%)
Frame = +3 / +3
Query: 18 TLLERPNFPEDTTWFF*N*MQKGNEKQRQNHQLSRFPMEILYLGHYIQHRPPILP 182
T L RPN PE WFF*N M NE+QR NHQLS+ PMEILY G Q PPI P
Sbjct: 4272 TELARPNCPEGIIWFF*NWMPTENEQQRLNHQLSQSPMEILYFGCCSQ*HPPIEP 4436
Score = 73.9 bits (155), Expect(4) = 2e-025
Identities = 34/53 (64%), Positives = 37/53 (69%)
Frame = -2 / -2
Query: 176 DGRTVLNVMAKIEYLHGKSR*LVVLSLFLIPFLHLVLKEPSCVLREIWTFQQC 18
DGR +L AKIEYLHG+ R*LVV SL LI H VLKEP+ LR IWT Q C
Sbjct: 4430 DGRMLLTATAKIEYLHGRLR*LVVQSLLLILCRHPVLKEPNYALRAIWTCQLC 4272
Score = 73.5 bits (154), Expect(4) = 2e-054
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = -1 / -1
Query: 537 GDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKNRSVFHISYNPRA 370
GD G LG A Q KN +F+ F+S+S+K +L+AVADSLK+ SVFHI YNPR+
Sbjct: 6357 GDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSLKHGSVFHICYNPRS 6190
Score = 72.1 bits (151), Expect(4) = 2e-054
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = -1 / -1
Query: 375 RATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSER 256
RATASEY++PY KF+KS NHPVCIG R F +EDV+ER
Sbjct: 6075 RATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNER 5956
Score = 66.6 bits (139), Expect(4) = 2e-046
Identities = 30/54 (55%), Positives = 32/54 (59%)
Frame = +3 / +3
Query: 375 LDCKKCEKHFCSSRNQLQPSKNAALCCHY*NLQKGXHFXAE*XXAHPXXXHXHH 536
L C KCEKHF SRNQ QP+ A+L Y* L K HF AE* HP H HH
Sbjct: 6195 LGCNKCEKHFHVSRNQPQPTVCASLNFRY*KL*KSLHF*AE*LFEHPILAHHHH 6356
Score = 57.0 bits (118), Expect(4) = 2e-054
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = -1 / -2
Query: 258 RRSGVVVRISEIDPMKWPGSKWRSLLV 178
RRSG++ +SE+DP++WPGSKWRSLLV
Sbjct: 5882 RRSGMIAGVSEVDPIRWPGSKWRSLLV 5802
Score = 56.1 bits (116), Expect(4) = 2e-046
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +2 / +2
Query: 257 LSLTSSLWH*KLILAPIQTG*LRLFRNLAYGIIYSEAVAL 376
LSLTSSL * L L PIQTG L+LF N YG YSEAVAL
Sbjct: 5957 LSLTSSLSK*NLNLIPIQTGWLKLFTNFQYGTTYSEAVAL 6076
Score = 52.8 bits (109), Expect(4) = 2e-046
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1 / +3
Query: 175 SYQQASPLRARPFHGIYFTNANNHSRSPFTNI 270
+YQ+ASPL RP G+YFTN NHSR+P T I
Sbjct: 5799 AYQKASPL*TRPSDGVYFTNTGNHSRTPTTQI 5894
Score = 51.0 bits (105), Expect(4) = 7e-033
Identities = 28/57 (49%), Positives = 31/57 (54%)
Frame = -2 / -2
Query: 536 VMXVXXXWVXXXLFSXKMXPFLKISIVTAQSGIL*RL*LIP*RTEVFFTFLTIQELL 366
VM V WV L S KM F K+ + Q RL LIP* EVFFTF+T Q LL
Sbjct: 6356 VMMVS*DWVFEELLSLKMKRFSKLLVAKVQRCAHCRLWLIP*NMEVFFTFVTTQGLL 6186
Score = 46.9 bits (96), Expect(4) = 1e-031
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +1 / +1
Query: 388 NVKNTSVLQGISYSRQRMPLCAVTIEIFKKGXIFXLNSXXXTQXXXTXIT 537
NVKNTS+ QGIS+SRQ L + F+ IF L+S TQ T IT
Sbjct: 6208 NVKNTSMFQGISHSRQCAHL*TFATKSFENRFIFKLSSSSNTQS*LTIIT 6357
Score = 45.1 bits (92), Expect(4) = 7e-033
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = -2 / -2
Query: 371 LLLQNILFHTLSS*RASIIQSVLEQGSTFSAIMKMLVKG 255
LLL + LFH SS*+AS IQ VLE GS+F +KML++G
Sbjct: 6071 LLLLSTLFHIGSS*KASTIQFVLE*GSSFILRVKMLMRG 5955
Score = 45.1 bits (92), Expect(4) = 1e-031
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2 / +1
Query: 179 TSRLLHFEPGHFMGSISLMRTTTPDRL 259
T RLLHFEPGH MGS SL P+RL
Sbjct: 5803 TRRLLHFEPGHLMGSTSLTPAIIPERL 5883
Score = 43.7 bits (89), Expect(4) = 2e-025
Identities = 24/47 (51%), Positives = 26/47 (55%)
Frame = -3 / -3
Query: 514 GXAXXYSAXKXXPF*RFQ**QHKAAFFDGCS*FLEEQKCFSHFLQSK 374
G + YSA K F F * + K A GC *FLE KCFSH LQ K
Sbjct: 6334 GCSKSYSA*K*SDFQSF**RKFKDAHTVGCG*FLETWKCFSHLLQPK 6194
Score = 43.7 bits (89), Expect(4) = 1e-031
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1 / +1
Query: 256 PFTNIFIMALKVDPCSNTDWMIEALQEL 339
P NIF + +K++P SNT+WM+EA EL
Sbjct: 5956 PLINIFTLKMKLEPHSNTNWMVEAFHEL 6039
Score = 42.3 bits (86), Expect(4) = 7e-033
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -3 / -1
Query: 256 AIWSGCSH**NRSHEMAWLEVEKPAG 179
A W+ C **+R H+MAW +VEKP+G
Sbjct: 5880 AFWNDCRC**SRPHQMAWFKVEKPSG 5803
Score = 37.7 bits (76), Expect(4) = 2e-025
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -3 / -3
Query: 370 YCFRIYYSIR*VPEEPQSSSLYWSKDQLSVP**RC**K 257
YCF + SI V E+ Q SSLYW++ Q+S *RC**+
Sbjct: 6070 YCF*VRCSILEVREKLQPSSLYWNEVQVSF*E*RC**E 5957
Score = 33.6 bits (67), Expect(4) = 2e-025
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -2 / -3
Query: 275 MKMLVKGDLEWLFALVK*IP*NGLARSGEACW 180
+ + V G LE L LVK* P +GL +SGEA W
Sbjct: 5899 LTICVVGVLE*LPVLVK*TPSDGLVQSGEAFW 5804
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0503C12
Length = 147180
Score = 85.4 bits (180), Expect(4) = 2e-051
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = -1 / -1
Query: 180 VRWEDGAECNGQDRVSPWEIEIXXXXXXXXXXXXXXXSKRTKLCPQGNLDVPAM 19
VRWED +CN Q+RVSPWEIEI SKRTKLCPQGNLDVPA+
Sbjct: 25824 VRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSKRTKLCPQGNLDVPAL 25663
Score = 85.4 bits (180), Expect(4) = 2e-043
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +1 / +1
Query: 7 IPIPHCWNVQISLRTQLGSFRTRCRKGMRNRDRTTSYLDFPWRYSILAITFSTVLPS 177
+ + W+VQI+LR GSFRT CR+ M NRD TT+YL+ PWRYSILA+ S++LPS
Sbjct: 25651 LELTQSWHVQIALRA*FGSFRTGCRQRMSNRD*TTNYLNLPWRYSILAVAVSSILPS 25821
Score = 76.2 bits (160), Expect(4) = 6e-030
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = -3 / -3
Query: 181 GKMGGRC*M*WPR*SISMGNRDSWWFCLCFSFPFCI*F*KNQVVSSGKFGRSSNV 17
G MGG *+ P+*SISMG+ DSWWF LC SF I F*KNQ++ SG+FGR+S+V
Sbjct: 25825 GSMGGCY*LQQPK*SISMGD*DSWWFNLCCSFSVGIQF*KNQIMPSGQFGRASSV 25661
Score = 74.8 bits (157), Expect(4) = 1e-028
Identities = 34/55 (61%), Positives = 36/55 (65%)
Frame = +3 / +3
Query: 18 TLLERPNFPEDTTWFF*N*MQKGNEKQRQNHQLSRFPMEILYLGHYIQHRPPILP 182
T L RPN PE WFF*N M NE+QR NHQLS+ PMEILY G Q PPI P
Sbjct: 25662 TELARPNCPEGIIWFF*NWMPTENEQQRLNHQLSQSPMEILYFGCCSQ*HPPIEP 25826
Score = 73.9 bits (155), Expect(4) = 2e-022
Identities = 34/53 (64%), Positives = 37/53 (69%)
Frame = -2 / -2
Query: 176 DGRTVLNVMAKIEYLHGKSR*LVVLSLFLIPFLHLVLKEPSCVLREIWTFQQC 18
DGR +L AKIEYLHG+ R*LVV SL LI H VLKEP+ LR IWT Q C
Sbjct: 25820 DGRMLLTATAKIEYLHGRLR*LVVQSLLLILCRHPVLKEPNYALRAIWTCQLC 25662
Score = 73.5 bits (154), Expect(4) = 2e-051
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = -1 / -1
Query: 537 GDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKNRSVFHISYNPRA 370
GD G LG A Q KN +F+ F+S+S+K +L+AVADSLK+ SVFHI YNPR+
Sbjct: 27747 GDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSLKHGSVFHICYNPRS 27580
Score = 72.1 bits (151), Expect(4) = 2e-051
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = -1 / -1
Query: 375 RATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSER 256
RATASEY++PY KF+KS NHPVCIG R F +EDV+ER
Sbjct: 27465 RATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNER 27346
Score = 66.6 bits (139), Expect(4) = 2e-043
Identities = 30/54 (55%), Positives = 32/54 (59%)
Frame = +3 / +3
Query: 375 LDCKKCEKHFCSSRNQLQPSKNAALCCHY*NLQKGXHFXAE*XXAHPXXXHXHH 536
L C KCEKHF SRNQ QP+ A+L Y* L K HF AE* HP H HH
Sbjct: 27585 LGCNKCEKHFHVSRNQPQPTVCASLNFRY*KL*KSLHF*AE*LFEHPILAHHHH 27746
Score = 57.0 bits (118), Expect(4) = 2e-051
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = -1 / -2
Query: 258 RRSGVVVRISEIDPMKWPGSKWRSLLV 178
RRSG++ +SE+DP++WPGSKWRSLLV
Sbjct: 27272 RRSGMIAGVSEVDPIRWPGSKWRSLLV 27192
Score = 56.1 bits (116), Expect(4) = 2e-043
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +2 / +2
Query: 257 LSLTSSLWH*KLILAPIQTG*LRLFRNLAYGIIYSEAVAL 376
LSLTSSL * L L PIQTG L+LF N YG YSEAVAL
Sbjct: 27347 LSLTSSLSK*NLNLIPIQTGWLKLFTNFQYGTTYSEAVAL 27466
Score = 52.8 bits (109), Expect(4) = 2e-043
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1 / +3
Query: 175 SYQQASPLRARPFHGIYFTNANNHSRSPFTNI 270
+YQ+ASPL RP G+YFTN NHSR+P T I
Sbjct: 27189 AYQKASPL*TRPSDGVYFTNTGNHSRTPTTQI 27284
Score = 51.0 bits (105), Expect(4) = 6e-030
Identities = 28/57 (49%), Positives = 31/57 (54%)
Frame = -2 / -2
Query: 536 VMXVXXXWVXXXLFSXKMXPFLKISIVTAQSGIL*RL*LIP*RTEVFFTFLTIQELL 366
VM V WV L S KM F K+ + Q RL LIP* EVFFTF+T Q LL
Sbjct: 27746 VMMVS*DWVFEELLSLKMKRFSKLLVAKVQRCAHCRLWLIP*NMEVFFTFVTTQGLL 27576
Score = 46.9 bits (96), Expect(4) = 1e-028
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +1 / +1
Query: 388 NVKNTSVLQGISYSRQRMPLCAVTIEIFKKGXIFXLNSXXXTQXXXTXIT 537
NVKNTS+ QGIS+SRQ L + F+ IF L+S TQ T IT
Sbjct: 27598 NVKNTSMFQGISHSRQCAHL*TFATKSFENRFIFKLSSSSNTQS*LTIIT 27747
Score = 45.1 bits (92), Expect(4) = 6e-030
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = -2 / -2
Query: 371 LLLQNILFHTLSS*RASIIQSVLEQGSTFSAIMKMLVKG 255
LLL + LFH SS*+AS IQ VLE GS+F +KML++G
Sbjct: 27461 LLLLSTLFHIGSS*KASTIQFVLE*GSSFILRVKMLMRG 27345
Score = 45.1 bits (92), Expect(4) = 1e-028
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2 / +1
Query: 179 TSRLLHFEPGHFMGSISLMRTTTPDRL 259
T RLLHFEPGH MGS SL P+RL
Sbjct: 27193 TRRLLHFEPGHLMGSTSLTPAIIPERL 27273
Score = 43.7 bits (89), Expect(4) = 2e-022
Identities = 24/47 (51%), Positives = 26/47 (55%)
Frame = -3 / -3
Query: 514 GXAXXYSAXKXXPF*RFQ**QHKAAFFDGCS*FLEEQKCFSHFLQSK 374
G + YSA K F F * + K A GC *FLE KCFSH LQ K
Sbjct: 27724 GCSKSYSA*K*SDFQSF**RKFKDAHTVGCG*FLETWKCFSHLLQPK 27584
Score = 43.7 bits (89), Expect(4) = 1e-028
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1 / +1
Query: 256 PFTNIFIMALKVDPCSNTDWMIEALQEL 339
P NIF + +K++P SNT+WM+EA EL
Sbjct: 27346 PLINIFTLKMKLEPHSNTNWMVEAFHEL 27429
Score = 42.3 bits (86), Expect(4) = 6e-030
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -3 / -1
Query: 256 AIWSGCSH**NRSHEMAWLEVEKPAG 179
A W+ C **+R H+MAW +VEKP+G
Sbjct: 27270 AFWNDCRC**SRPHQMAWFKVEKPSG 27193
Score = 37.7 bits (76), Expect(4) = 2e-022
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -3 / -3
Query: 370 YCFRIYYSIR*VPEEPQSSSLYWSKDQLSVP**RC**K 257
YCF + SI V E+ Q SSLYW++ Q+S *RC**+
Sbjct: 27460 YCF*VRCSILEVREKLQPSSLYWNEVQVSF*E*RC**E 27347
Score = 33.6 bits (67), Expect(4) = 2e-022
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -2 / -3
Query: 275 MKMLVKGDLEWLFALVK*IP*NGLARSGEACW 180
+ + V G LE L LVK* P +GL +SGEA W
Sbjct: 27289 LTICVVGVLE*LPVLVK*TPSDGLVQSGEAFW 27194
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0435B05
Length = 150997
Score = 85.4 bits (180), Expect(4) = 2e-043
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +1 / +1
Query: 7 IPIPHCWNVQISLRTQLGSFRTRCRKGMRNRDRTTSYLDFPWRYSILAITFSTVLPS 177
+ + W+VQI+LR GSFRT CR+ M NRD TT+YL+ PWRYSILA+ S++LPS
Sbjct: 124942 LELTQSWHVQIALRA*FGSFRTGCRQRMSNRD*TTNYLNLPWRYSILAVAVSSILPS 125112
Score = 85.4 bits (180), Expect(4) = 2e-051
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = -1 / -2
Query: 180 VRWEDGAECNGQDRVSPWEIEIXXXXXXXXXXXXXXXSKRTKLCPQGNLDVPAM 19
VRWED +CN Q+RVSPWEIEI SKRTKLCPQGNLDVPA+
Sbjct: 125115 VRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSKRTKLCPQGNLDVPAL 124954
Score = 76.2 bits (160), Expect(4) = 7e-030
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = -3 / -1
Query: 181 GKMGGRC*M*WPR*SISMGNRDSWWFCLCFSFPFCI*F*KNQVVSSGKFGRSSNV 17
G MGG *+ P+*SISMG+ DSWWF LC SF I F*KNQ++ SG+FGR+S+V
Sbjct: 125116 GSMGGCY*LQQPK*SISMGD*DSWWFNLCCSFSVGIQF*KNQIMPSGQFGRASSV 124952
Score = 74.8 bits (157), Expect(4) = 1e-028
Identities = 34/55 (61%), Positives = 36/55 (65%)
Frame = +3 / +3
Query: 18 TLLERPNFPEDTTWFF*N*MQKGNEKQRQNHQLSRFPMEILYLGHYIQHRPPILP 182
T L RPN PE WFF*N M NE+QR NHQLS+ PMEILY G Q PPI P
Sbjct: 124953 TELARPNCPEGIIWFF*NWMPTENEQQRLNHQLSQSPMEILYFGCCSQ*HPPIEP 125117
Score = 73.9 bits (155), Expect(4) = 2e-022
Identities = 34/53 (64%), Positives = 37/53 (69%)
Frame = -2 / -3
Query: 176 DGRTVLNVMAKIEYLHGKSR*LVVLSLFLIPFLHLVLKEPSCVLREIWTFQQC 18
DGR +L AKIEYLHG+ R*LVV SL LI H VLKEP+ LR IWT Q C
Sbjct: 125111 DGRMLLTATAKIEYLHGRLR*LVVQSLLLILCRHPVLKEPNYALRAIWTCQLC 124953
Score = 73.5 bits (154), Expect(4) = 2e-051
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = -1 / -2
Query: 537 GDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKNRSVFHISYNPRA 370
GD G LG A Q KN +F+ F+S+S+K +L+AVADSLK+ SVFHI YNPR+
Sbjct: 127038 GDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSLKHGSVFHICYNPRS 126871
Score = 72.1 bits (151), Expect(4) = 2e-051
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = -1 / -2
Query: 375 RATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSER 256
RATASEY++PY KF+KS NHPVCIG R F +EDV+ER
Sbjct: 126756 RATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNER 126637
Score = 66.6 bits (139), Expect(4) = 2e-043
Identities = 30/54 (55%), Positives = 32/54 (59%)
Frame = +3 / +3
Query: 375 LDCKKCEKHFCSSRNQLQPSKNAALCCHY*NLQKGXHFXAE*XXAHPXXXHXHH 536
L C KCEKHF SRNQ QP+ A+L Y* L K HF AE* HP H HH
Sbjct: 126876 LGCNKCEKHFHVSRNQPQPTVCASLNFRY*KL*KSLHF*AE*LFEHPILAHHHH 127037
Score = 57.0 bits (118), Expect(4) = 2e-051
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = -1 / -3
Query: 258 RRSGVVVRISEIDPMKWPGSKWRSLLV 178
RRSG++ +SE+DP++WPGSKWRSLLV
Sbjct: 126563 RRSGMIAGVSEVDPIRWPGSKWRSLLV 126483
Score = 56.1 bits (116), Expect(4) = 2e-043
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +2 / +2
Query: 257 LSLTSSLWH*KLILAPIQTG*LRLFRNLAYGIIYSEAVAL 376
LSLTSSL * L L PIQTG L+LF N YG YSEAVAL
Sbjct: 126638 LSLTSSLSK*NLNLIPIQTGWLKLFTNFQYGTTYSEAVAL 126757
Score = 52.8 bits (109), Expect(4) = 2e-043
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1 / +3
Query: 175 SYQQASPLRARPFHGIYFTNANNHSRSPFTNI 270
+YQ+ASPL RP G+YFTN NHSR+P T I
Sbjct: 126480 AYQKASPL*TRPSDGVYFTNTGNHSRTPTTQI 126575
Score = 51.0 bits (105), Expect(4) = 7e-030
Identities = 28/57 (49%), Positives = 31/57 (54%)
Frame = -2 / -3
Query: 536 VMXVXXXWVXXXLFSXKMXPFLKISIVTAQSGIL*RL*LIP*RTEVFFTFLTIQELL 366
VM V WV L S KM F K+ + Q RL LIP* EVFFTF+T Q LL
Sbjct: 127037 VMMVS*DWVFEELLSLKMKRFSKLLVAKVQRCAHCRLWLIP*NMEVFFTFVTTQGLL 126867
Score = 46.9 bits (96), Expect(4) = 1e-028
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +1 / +1
Query: 388 NVKNTSVLQGISYSRQRMPLCAVTIEIFKKGXIFXLNSXXXTQXXXTXIT 537
NVKNTS+ QGIS+SRQ L + F+ IF L+S TQ T IT
Sbjct: 126889 NVKNTSMFQGISHSRQCAHL*TFATKSFENRFIFKLSSSSNTQS*LTIIT 127038
Score = 45.1 bits (92), Expect(4) = 1e-028
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2 / +1
Query: 179 TSRLLHFEPGHFMGSISLMRTTTPDRL 259
T RLLHFEPGH MGS SL P+RL
Sbjct: 126484 TRRLLHFEPGHLMGSTSLTPAIIPERL 126564
Score = 45.1 bits (92), Expect(4) = 7e-030
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = -2 / -3
Query: 371 LLLQNILFHTLSS*RASIIQSVLEQGSTFSAIMKMLVKG 255
LLL + LFH SS*+AS IQ VLE GS+F +KML++G
Sbjct: 126752 LLLLSTLFHIGSS*KASTIQFVLE*GSSFILRVKMLMRG 126636
Score = 43.7 bits (89), Expect(4) = 1e-028
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1 / +1
Query: 256 PFTNIFIMALKVDPCSNTDWMIEALQEL 339
P NIF + +K++P SNT+WM+EA EL
Sbjct: 126637 PLINIFTLKMKLEPHSNTNWMVEAFHEL 126720
Score = 43.7 bits (89), Expect(4) = 2e-022
Identities = 24/47 (51%), Positives = 26/47 (55%)
Frame = -3 / -1
Query: 514 GXAXXYSAXKXXPF*RFQ**QHKAAFFDGCS*FLEEQKCFSHFLQSK 374
G + YSA K F F * + K A GC *FLE KCFSH LQ K
Sbjct: 127015 GCSKSYSA*K*SDFQSF**RKFKDAHTVGCG*FLETWKCFSHLLQPK 126875
Score = 42.3 bits (86), Expect(4) = 7e-030
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -3 / -2
Query: 256 AIWSGCSH**NRSHEMAWLEVEKPAG 179
A W+ C **+R H+MAW +VEKP+G
Sbjct: 126561 AFWNDCRC**SRPHQMAWFKVEKPSG 126484
Score = 37.7 bits (76), Expect(4) = 2e-022
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -3 / -1
Query: 370 YCFRIYYSIR*VPEEPQSSSLYWSKDQLSVP**RC**K 257
YCF + SI V E+ Q SSLYW++ Q+S *RC**+
Sbjct: 126751 YCF*VRCSILEVREKLQPSSLYWNEVQVSF*E*RC**E 126638
Score = 33.6 bits (67), Expect(4) = 2e-022
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -2 / -1
Query: 275 MKMLVKGDLEWLFALVK*IP*NGLARSGEACW 180
+ + V G LE L LVK* P +GL +SGEA W
Sbjct: 126580 LTICVVGVLE*LPVLVK*TPSDGLVQSGEAFW 126485
>dbj|AK067927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127F13, full
insert sequence
Length = 2616
Score = 195 bits (421), Expect = 3e-048
Identities = 78/156 (50%), Positives = 105/156 (67%)
Frame = -1 / +3
Query: 585 VNKXXXXXXXXVLXXXGDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKN 406
VN+ VL GD G LG A+Q +N LFE NS +K L++VA SL+N
Sbjct: 753 VNRKKLVSGDAVLFLRGDDGRLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLEN 932
Query: 405 RSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERRSGVVVRISE 226
+SVFHI +NPR+ ASE+I+PY + LKSLNHP IG R +ED +ER +G++ ISE
Sbjct: 933 KSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANERSAGLISGISE 1112
Query: 225 IDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 118
+DP++WPGS+W+ LLVRW+D + + Q+RVSPWEIE
Sbjct: 1113 VDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIE 1220
Score = 142 bits (305), Expect = 3e-032
Identities = 75/159 (47%), Positives = 84/159 (52%)
Frame = +2 / -3
Query: 107 PPAISISHGDTLSWPLHSAPSSHLTSRLLHFEPGHFMGSISLMRTTTPDRLSLTSSLWH* 286
PP +SISHG+TL W L S SSHLTSR H +PGH MGS SLM P LSL SSL
Sbjct: 1231 PPTLSISHGETLFWWLLSVLSSHLTSRHFHLDPGHLMGSTSLMPEINPADLSLASSLS*Q 1052
Query: 287 KLILAPIQTG*LRLFRNLAYGIIYSEAVALGL*EM*KTLLFFKESATAVKECRFVXXXXX 466
L L P++ G RLF NL YG + S+A LGL +M KTLLF KE AT + F
Sbjct: 1051 TLNLIPMENGWFRLFNNLQYGTMNSDAPLLGLKQMWKTLLFSKELATEDRMRSFESLLLT 872
Query: 467 XXXRXXFXX*IALXXPXXXXPXSPXXXNTXXXXXXXXLL 583
R F * AL P P SP T LL
Sbjct: 871 GSKRASFLS*TALLTPNLSRPSSPLRNKTASPETSFFLL 755
Score = 106 bits (227), Expect = 2e-021
Identities = 62/151 (41%), Positives = 83/151 (54%)
Frame = -2 / +1
Query: 536 VMXVXXXWVXXXLFSXKMXPFLKISIVTAQSGIL*RL*LIP*RTEVFFTFLTIQELLLQN 357
VM WV F+ +M P L +S QS L +P + +VF TF++ Q ++ QN
Sbjct: 802 VMMAD*DWV*GEQFNLEMRPSLNLSTAAIQSYAFYLLLPVPWKIKVFSTFVSTQGVVRQN 981
Query: 356 ILFHTLSS*RASIIQSVLEQGSTFSAIMKMLVKGDLEWLFALVK*IP*NGLARSGEACW* 177
L+ *RA I LE GS F+ +KML++G L+ ALVK P*+GL + G A W*
Sbjct: 982 SLYRIGDY*RA*TIHFPLE*GSEFAMRVKMLMRGPLD*FQALVKLTP*DGLDQDGNAYW* 1161
Query: 176 DGRTVLNVMAKIEYLHGKSR*LVVLSLFLIP 84
DG V K E+LHG+SR LV +S IP
Sbjct: 1162 DGMIVQIAATKTEFLHGRSRELVAVSRLPIP 1254
Score = 96.8 bits (205), Expect(2) = 4e-024
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = +1 / -2
Query: 82 KGMRNRDRTTSYLDFPWRYSILAITFSTVLPSYQQASPLRARPFHGIYFTNANNHSRSPF 261
+GM NRD T+ LD PWR S+L T++PSYQ A P +RP +G+ FTNA N S P
Sbjct: 1256 QGMGNRDTATNSLDLPWRNSVLVAAICTIIPSYQ*AFPS*SRPSYGVNFTNA*N*SSGPL 1077
Query: 262 TNIFIMALKVDPCSNTDWMIEALQ 333
+IF + +P SN WM++ALQ
Sbjct: 1076 ISIFTLIANSEPHSNGKWMVQALQ 1005
Score = 38.2 bits (77), Expect(2) = 4e-024
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = +3 / -1
Query: 387 KCEKHFCSSRNQLQPSKNAALCCHY*NLQKGXHFXAE*XXAHPXXXHXHH 536
KC KHF RN Q + AL * +Q+G HF E HP HH
Sbjct: 951 KCGKHFYFPRNWQQKIECVALNRCC*QVQRGPHF*VELLSLHPILVGHHH 802
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 85.4 bits (180), Expect(4) = 1e-045
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = -1 / -1
Query: 180 VRWEDGAECNGQDRVSPWEIEIXXXXXXXXXXXXXXXSKRTKLCPQGNLDVPAM 19
VRWED +CN Q+RVSPWEIEI SKRTKLCPQGNLDVPA+
Sbjct: 6140145 VRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSKRTKLCPQGNLDVPAL 6139984
Score = 85.4 bits (180), Expect(4) = 1e-037
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +1 / +1
Query: 7 IPIPHCWNVQISLRTQLGSFRTRCRKGMRNRDRTTSYLDFPWRYSILAITFSTVLPS 177
+ + W+VQI+LR GSFRT CR+ M NRD TT+YL+ PWRYSILA+ S++LPS
Sbjct: 6139972 LELTQSWHVQIALRA*FGSFRTGCRQRMSNRD*TTNYLNLPWRYSILAVAVSSILPS 6140142
Score = 76.2 bits (160), Expect(4) = 3e-024
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = -3 / -3
Query: 181 GKMGGRC*M*WPR*SISMGNRDSWWFCLCFSFPFCI*F*KNQVVSSGKFGRSSNV 17
G MGG *+ P+*SISMG+ DSWWF LC SF I F*KNQ++ SG+FGR+S+V
Sbjct: 6140146 GSMGGCY*LQQPK*SISMGD*DSWWFNLCCSFSVGIQF*KNQIMPSGQFGRASSV 6139982
Score = 74.8 bits (157), Expect(4) = 5e-023
Identities = 34/55 (61%), Positives = 36/55 (65%)
Frame = +3 / +3
Query: 18 TLLERPNFPEDTTWFF*N*MQKGNEKQRQNHQLSRFPMEILYLGHYIQHRPPILP 182
T L RPN PE WFF*N M NE+QR NHQLS+ PMEILY G Q PPI P
Sbjct: 6139983 TELARPNCPEGIIWFF*NWMPTENEQQRLNHQLSQSPMEILYFGCCSQ*HPPIEP 6140147
Score = 73.5 bits (154), Expect(4) = 1e-045
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = -1 / -1
Query: 537 GDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKNRSVFHISYNPRA 370
GD G LG A Q KN +F+ F+S+S+K +L+AVADSLK+ SVFHI YNPR+
Sbjct: 6142068 GDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSLKHGSVFHICYNPRS 6141901
Score = 72.1 bits (151), Expect(4) = 1e-045
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = -1 / -1
Query: 375 RATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSER 256
RATASEY++PY KF+KS NHPVCIG R F +EDV+ER
Sbjct: 6141786 RATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNER 6141667
Score = 66.6 bits (139), Expect(4) = 1e-037
Identities = 30/54 (55%), Positives = 32/54 (59%)
Frame = +3 / +3
Query: 375 LDCKKCEKHFCSSRNQLQPSKNAALCCHY*NLQKGXHFXAE*XXAHPXXXHXHH 536
L C KCEKHF SRNQ QP+ A+L Y* L K HF AE* HP H HH
Sbjct: 6141906 LGCNKCEKHFHVSRNQPQPTVCASLNFRY*KL*KSLHF*AE*LFEHPILAHHHH 6142067
Score = 57.0 bits (118), Expect(4) = 1e-045
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = -1 / -2
Query: 258 RRSGVVVRISEIDPMKWPGSKWRSLLV 178
RRSG++ +SE+DP++WPGSKWRSLLV
Sbjct: 6141593 RRSGMIAGVSEVDPIRWPGSKWRSLLV 6141513
Score = 56.1 bits (116), Expect(4) = 1e-037
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +2 / +2
Query: 257 LSLTSSLWH*KLILAPIQTG*LRLFRNLAYGIIYSEAVAL 376
LSLTSSL * L L PIQTG L+LF N YG YSEAVAL
Sbjct: 6141668 LSLTSSLSK*NLNLIPIQTGWLKLFTNFQYGTTYSEAVAL 6141787
Score = 52.8 bits (109), Expect(4) = 1e-037
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1 / +3
Query: 175 SYQQASPLRARPFHGIYFTNANNHSRSPFTNI 270
+YQ+ASPL RP G+YFTN NHSR+P T I
Sbjct: 6141510 AYQKASPL*TRPSDGVYFTNTGNHSRTPTTQI 6141605
Score = 51.0 bits (105), Expect(4) = 3e-024
Identities = 28/57 (49%), Positives = 31/57 (54%)
Frame = -2 / -2
Query: 536 VMXVXXXWVXXXLFSXKMXPFLKISIVTAQSGIL*RL*LIP*RTEVFFTFLTIQELL 366
VM V WV L S KM F K+ + Q RL LIP* EVFFTF+T Q LL
Sbjct: 6142067 VMMVS*DWVFEELLSLKMKRFSKLLVAKVQRCAHCRLWLIP*NMEVFFTFVTTQGLL 6141897
Score = 46.9 bits (96), Expect(4) = 5e-023
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +1 / +1
Query: 388 NVKNTSVLQGISYSRQRMPLCAVTIEIFKKGXIFXLNSXXXTQXXXTXIT 537
NVKNTS+ QGIS+SRQ L + F+ IF L+S TQ T IT
Sbjct: 6141919 NVKNTSMFQGISHSRQCAHL*TFATKSFENRFIFKLSSSSNTQS*LTIIT 6142068
Score = 45.1 bits (92), Expect(4) = 3e-024
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = -2 / -2
Query: 371 LLLQNILFHTLSS*RASIIQSVLEQGSTFSAIMKMLVKG 255
LLL + LFH SS*+AS IQ VLE GS+F +KML++G
Sbjct: 6141782 LLLLSTLFHIGSS*KASTIQFVLE*GSSFILRVKMLMRG 6141666
Score = 45.1 bits (92), Expect(4) = 5e-023
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2 / +1
Query: 179 TSRLLHFEPGHFMGSISLMRTTTPDRL 259
T RLLHFEPGH MGS SL P+RL
Sbjct: 6141514 TRRLLHFEPGHLMGSTSLTPAIIPERL 6141594
Score = 43.7 bits (89), Expect(4) = 5e-023
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1 / +1
Query: 256 PFTNIFIMALKVDPCSNTDWMIEALQEL 339
P NIF + +K++P SNT+WM+EA EL
Sbjct: 6141667 PLINIFTLKMKLEPHSNTNWMVEAFHEL 6141750
Score = 42.3 bits (86), Expect(4) = 3e-024
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -3 / -1
Query: 256 AIWSGCSH**NRSHEMAWLEVEKPAG 179
A W+ C **+R H+MAW +VEKP+G
Sbjct: 6141591 AFWNDCRC**SRPHQMAWFKVEKPSG 6141514
>gb|CB000680.1|CB000680 S345J_F06 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 301
Score = 160 bits (345), Expect = 9e-038
Identities = 57/83 (68%), Positives = 70/83 (84%)
Frame = -1 / +3
Query: 363 SEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERRSGVVVRISEIDPMKWPGSKWRSL 184
SEY++PY KF+KS NHPVCIG R F +EDV+ERRSG++ +SE+DP++WPGSKWRSL
Sbjct: 3 SEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNERRSGMIAGVSEVDPIRWPGSKWRSL 182
Query: 183 LVRWEDGAECNGQDRVSPWEIEI 115
LVRWED +CN Q+RVSPWEIEI
Sbjct: 183 LVRWEDATDCNSQNRVSPWEIEI 251
Score = 143 bits (306), Expect = 2e-032
Identities = 55/91 (60%), Positives = 70/91 (76%)
Frame = +1 / -3
Query: 67 RTRCRKGMRNRDRTTSYLDFPWRYSILAITFSTVLPSYQQASPLRARPFHGIYFTNANNH 246
RT CR+ M NRD TT+YL+ PWRYSILA+ S++LPS Q+ASPL RP G+YFTN NH
Sbjct: 299 RTGCRQRMSNRD*TTNYLNLPWRYSILAVAVSSILPSNQKASPL*TRPSDGVYFTNTGNH 120
Query: 247 SRSPFTNIFIMALKVDPCSNTDWMIEALQEL 339
SR+P NIF + +K++P SNT+WM+EA EL
Sbjct: 119 SRTPLINIFTLKMKLEPHSNTNWMVEAFHEL 27
Score = 128 bits (274), Expect = 5e-028
Identities = 58/86 (67%), Positives = 60/86 (69%)
Frame = +2 / -1
Query: 107 PPAISISHGDTLSWPLHSAPSSHLTSRLLHFEPGHFMGSISLMRTTTPDRLSLTSSLWH* 286
PP ISISHGDTL W L S SSH T RLLHFEPGH MGS SL P+RLSLTSSL *
Sbjct: 259 PPTISISHGDTLFWLLQSVASSHRTRRLLHFEPGHLMGSTSLTPAIIPERLSLTSSLSK* 80
Query: 287 KLILAPIQTG*LRLFRNLAYGIIYSE 364
L L PIQTG L+LF N YG YSE
Sbjct: 79 NLNLIPIQTGWLKLFTNFQYGTTYSE 2
Score = 114 bits (243), Expect = 1e-023
Identities = 56/100 (56%), Positives = 70/100 (70%)
Frame = -3 / +2
Query: 364 FRIYYSIR*VPEEPQSSSLYWSKDQLSVP**RC**KAIWSGCSH**NRSHEMAWLEVEKP 185
F + SI V E+ Q SSLYW++ Q+S *RC**+A W+ C **+R H+MAW +VEKP
Sbjct: 2 F*VRCSILEVREKLQPSSLYWNEVQVSF*E*RC**EAFWNDCRC**SRPHQMAWFKVEKP 181
Query: 184 AGKMGGRC*M*WPR*SISMGNRDSWWFCLCFSFPFCI*F* 65
+G MGG *+ P+*SISMG+ DSWWF LC SF I F*
Sbjct: 182 SGSMGGCY*LQQPK*SISMGD*DSWWFNLCCSFSVGIQF* 301
Score = 112 bits (239), Expect = 4e-023
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = -2 / +1
Query: 365 LQNILFHTLSS*RASIIQSVLEQGSTFSAIMKMLVKGDLEWLFALVK*IP*NGLARSGEA 186
L + LFH SS*+AS IQ VLE GS+F +KML++G LE L LVK* P +GL +SGEA
Sbjct: 1 LLSTLFHIGSS*KASTIQFVLE*GSSFILRVKMLMRGVLE*LPVLVK*TPSDGLVQSGEA 180
Query: 185 CW*DGRTVLNVMAKIEYLHGKSR*LVVLSLFLIPFLHLVL 66
W DGR +L AKIEYLHG+ R*LVV SL LI H VL
Sbjct: 181 FWFDGRMLLTATAKIEYLHGRLR*LVVQSLLLILCRHPVL 300
Score = 106 bits (226), Expect = 2e-021
Identities = 54/95 (56%), Positives = 60/95 (63%)
Frame = +3 / -2
Query: 66 *N*MQKGNEKQRQNHQLSRFPMEILYLGHYIQHRPPILPAGFSTSSQAISWDLFH*CEQP 245
*N M NE+QR NHQLS+ PMEILY G Q PPI P GFST +QAI W L H* Q
Sbjct: 300 *NWMPTENEQQRLNHQLSQSPMEILYFGCCSQ*HPPIEPEGFSTLNQAI*WGLLH*HRQS 121
Query: 246 LQIAFH*HLHYGTES*SLLQYRLDD*GSSGT*RME 350
Q A H*HLH E+*+ QY+LD * S T ME
Sbjct: 120 FQNASH*HLHSQNET*TSFQYKLDG*SFSRTSNME 16
>gb|CA999797.1|CA999797 S234J_D11 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 236
Score = 147 bits (316), Expect = 9e-034
Identities = 52/78 (66%), Positives = 65/78 (83%)
Frame = -1 / +3
Query: 363 SEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERRSGVVVRISEIDPMKWPGSKWRSL 184
SEY++PY KF+KS NHPVCIG R F +EDV+ERRSG++ +SE+DP++WPGSKWRSL
Sbjct: 3 SEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNERRSGMIAGVSEVDPIRWPGSKWRSL 182
Query: 183 LVRWEDGAECNGQDRVSP 130
LVRWED +CN Q+RVSP
Sbjct: 183 LVRWEDATDCNSQNRVSP 236
Score = 111 bits (238), Expect = 5e-023
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = +1 / -1
Query: 130 WRYSILAITFSTVLPSYQQASPLRARPFHGIYFTNANNHSRSPFTNIFIMALKVDPCSNT 309
WRYSILA+ S++LPS Q+ASPL RP G+YFTN NHSR+P NIF + +K++P SNT
Sbjct: 236 WRYSILAVAVSSILPSNQKASPL*TRPSDGVYFTNTGNHSRTPLINIFTLKMKLEPHSNT 57
Query: 310 DWMIEALQEL 339
+WM+EA EL
Sbjct: 56 NWMVEAFHEL 27
Score = 111 bits (236), Expect = 9e-023
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +2 / -2
Query: 131 GDTLSWPLHSAPSSHLTSRLLHFEPGHFMGSISLMRTTTPDRLSLTSSLWH*KLILAPIQ 310
GDTL W L S SSH T RLLHFEPGH MGS SL P+RLSLTSSL * L L PIQ
Sbjct: 235 GDTLFWLLQSVASSHRTRRLLHFEPGHLMGSTSLTPAIIPERLSLTSSLSK*NLNLIPIQ 56
Query: 311 TG*LRLFRNLAYGIIYSE 364
TG L+LF N YG YSE
Sbjct: 55 TGWLKLFTNFQYGTTYSE 2
>ref|NM_191956.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2190
Score = 146 bits (313), Expect = 2e-033
Identities = 62/157 (39%), Positives = 88/157 (56%)
Frame = -1 / +1
Query: 585 VNKXXXXXXXXVLXXXGDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKN 406
+NK VL G+ G LG A Q KN F ++ + SL+ VA ++
Sbjct: 658 INKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVAV 837
Query: 405 RSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERRSGVVVRISE 226
+S+FHI YNPR + SE+IIPY KF++S + P +G R + +ED SERR ++ S
Sbjct: 838 KSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIIIGSR 1017
Query: 225 IDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIEI 115
W GSKW+ L+V+W+D EC + VSPWEIE+
Sbjct: 1018 EADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIEL 1128
>gb|AQ796174.1|AQ796174 nbxb0062L17r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0062L17r, DNA sequence
Length = 491
Score = 72.1 bits (151), Expect(3) = 7e-032
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = -1 / +1
Query: 375 RATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSER 256
RATASEY++PY KF+KS NHPVCIG R F +EDV+ER
Sbjct: 211 RATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNER 330
Score = 57.0 bits (118), Expect(3) = 7e-032
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = -1 / +2
Query: 258 RRSGVVVRISEIDPMKWPGSKWRSLLV 178
RRSG++ +SE+DP++WPGSKWRSLLV
Sbjct: 404 RRSGMIAGVSEVDPIRWPGSKWRSLLV 484
Score = 56.1 bits (116), Expect(3) = 4e-023
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +2 / -1
Query: 257 LSLTSSLWH*KLILAPIQTG*LRLFRNLAYGIIYSEAVAL 376
LSLTSSL * L L PIQTG L+LF N YG YSEAVAL
Sbjct: 329 LSLTSSLSK*NLNLIPIQTGWLKLFTNFQYGTTYSEAVAL 210
Score = 52.8 bits (109), Expect(3) = 4e-023
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1 / -2
Query: 175 SYQQASPLRARPFHGIYFTNANNHSRSPFTNI 270
+YQ+ASPL RP G+YFTN NHSR+P T I
Sbjct: 487 AYQKASPL*TRPSDGVYFTNTGNHSRTPTTQI 392
Score = 50.1 bits (103), Expect(3) = 7e-032
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = -1 / +1
Query: 462 NSDSTKRHSLTAVADSLKNRSVFHISYNPRA 370
+S+S+K +L+AVADSLK+ SVFHI YNPR+
Sbjct: 4 SSESSKMRTLSAVADSLKHGSVFHICYNPRS 96
Score = 40.5 bits (82), Expect(3) = 4e-023
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +3 / -2
Query: 375 LDCKKCEKHFCSSRNQLQPSKNAALCCHY* 464
L C KCEKHF SRNQ QP+ A+L Y*
Sbjct: 91 LGCNKCEKHFHVSRNQPQPTVCASLNFRY* 2
>gb|AACV01012559.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012559, whole
genome shotgun sequence
Length = 17440
Score = 67.5 bits (141), Expect(4) = 2e-029
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1 / +2
Query: 537 GDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKNRSVFHISYNPR 373
GD G LG A+Q +N LFE NS +K L++VA SL+N+SVFHI +NPR
Sbjct: 1727 GDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPR 1891
Score = 52.8 bits (109), Expect(4) = 2e-029
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = -1 / +2
Query: 384 YNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSER 256
++ R+ ASE+I+PY + LKSLNHP IG R +ED +ER
Sbjct: 2126 FSHRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANER 2254
Score = 47.3 bits (97), Expect(4) = 2e-029
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = -1 / +3
Query: 258 RRSGVVVRISEIDPMKWPGSKWRSLLV 178
R +G++ ISE+DP++WPGS+W+ LLV
Sbjct: 2325 RSAGLISGISEVDPIRWPGSRWKCLLV 2405
Score = 36.3 bits (73), Expect(4) = 2e-029
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -3 / +2
Query: 148 PR*SISMGNRDSWWFCLCFSF 86
P+ S SMG+R+SWW CL + F
Sbjct: 3527 PKQSFSMGDRESWWQCLGYPF 3589
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06,
complete sequence
Length = 142068
Score = 67.5 bits (141), Expect(4) = 6e-027
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1 / +2
Query: 537 GDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKNRSVFHISYNPR 373
GD G LG A+Q +N LFE NS +K L++VA SL+N+SVFHI +NPR
Sbjct: 92777 GDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPR 92941
Score = 52.8 bits (109), Expect(4) = 6e-027
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = -1 / +2
Query: 384 YNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSER 256
++ R+ ASE+I+PY + LKSLNHP IG R +ED +ER
Sbjct: 93176 FSHRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANER 93304
Score = 47.3 bits (97), Expect(4) = 6e-027
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = -1 / +3
Query: 258 RRSGVVVRISEIDPMKWPGSKWRSLLV 178
R +G++ ISE+DP++WPGS+W+ LLV
Sbjct: 93375 RSAGLISGISEVDPIRWPGSRWKCLLV 93455
Score = 36.3 bits (73), Expect(4) = 6e-027
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -3 / +1
Query: 148 PR*SISMGNRDSWWFCLCFSF 86
P+ S SMG+R+SWW CL + F
Sbjct: 94576 PKQSFSMGDRESWWQCLGYPF 94638
>gb|CF305577.1|CF305577 HDA1--01-B17.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--01-B17, mRNA sequence
Length = 597
Score = 99.6 bits (211), Expect(3) = 7e-025
Identities = 46/128 (35%), Positives = 66/128 (51%)
Frame = -1 / +3
Query: 585 VNKXXXXXXXXVLXXXGDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKN 406
+NK VL G+ G LG A Q KN F ++ + SL+ VA ++
Sbjct: 84 INKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVAV 263
Query: 405 RSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERRSGVVVRISE 226
+S+FHI YNPR + SE+IIPY KF++S + P +G R + +ED SERR ++ S
Sbjct: 264 KSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIIIGSR 443
Query: 225 IDPMKWPG 202
W G
Sbjct: 444 EADPMWHG 467
Score = 29.0 bits (57), Expect(3) = 7e-025
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1 / +1
Query: 204 GSKWRSLLVRWED 166
GSKW+ L+V+W+D
Sbjct: 466 GSKWKCLVVKWDD 504
Score = 26.7 bits (52), Expect(3) = 7e-025
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1 / +2
Query: 159 ECNGQDRVSPWEIEI 115
EC + VSPWEIE+
Sbjct: 512 ECRRPNGVSPWEIEL 556
>ref|NT_107217.1| Oryza sativa (japonica cultivar-group)
Length = 898765
Score = 67.5 bits (141), Expect(4) = 1e-024
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1 / +3
Query: 537 GDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKNRSVFHISYNPR 373
GD G LG A+Q +N LFE NS +K L++VA SL+N+SVFHI +NPR
Sbjct: 427026 GDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPR 427190
Score = 52.8 bits (109), Expect(4) = 1e-024
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = -1 / +3
Query: 384 YNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSER 256
++ R+ ASE+I+PY + LKSLNHP IG R +ED +ER
Sbjct: 427425 FSHRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANER 427553
Score = 47.3 bits (97), Expect(4) = 1e-024
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = -1 / +1
Query: 258 RRSGVVVRISEIDPMKWPGSKWRSLLV 178
R +G++ ISE+DP++WPGS+W+ LLV
Sbjct: 427624 RSAGLISGISEVDPIRWPGSRWKCLLV 427704
Score = 36.3 bits (73), Expect(4) = 1e-024
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -3 / +2
Query: 148 PR*SISMGNRDSWWFCLCFSF 86
P+ S SMG+R+SWW CL + F
Sbjct: 428825 PKQSFSMGDRESWWQCLGYPF 428887
>dbj|AK058446.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-G06, full
insert sequence
Length = 1408
Score = 110 bits (234), Expect = 2e-022
Identities = 40/72 (55%), Positives = 54/72 (75%)
Frame = -1 / +3
Query: 333 LKSLNHPVCIGARINFQCHNEDVSERRSGVVVRISEIDPMKWPGSKWRSLLVRWEDGAEC 154
LKSLNHP IG R +ED +ER +G++ ISE+DP++WPGS+W+ LLVRW+D +
Sbjct: 6 LKSLNHPFSIGMRFRVCYESEDANERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDS 185
Query: 153 NGQDRVSPWEIE 118
+ Q+RVSPWEIE
Sbjct: 186 SHQNRVSPWEIE 221
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 67.5 bits (141), Expect(4) = 3e-022
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1 / +1
Query: 537 GDXGXXXLGXXXAIQXKNXXLFEDFNSDSTKRHSLTAVADSLKNRSVFHISYNPR 373
GD G LG A+Q +N LFE NS +K L++VA SL+N+SVFHI +NPR
Sbjct: 7789753 GDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPR 7789917
Score = 52.8 bits (109), Expect(4) = 3e-022
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = -1 / +1
Query: 384 YNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSER 256
++ R+ ASE+I+PY + LKSLNHP IG R +ED +ER
Sbjct: 7790152 FSHRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANER 7790280
Score = 47.3 bits (97), Expect(4) = 3e-022
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = -1 / +2
Query: 258 RRSGVVVRISEIDPMKWPGSKWRSLLV 178
R +G++ ISE+DP++WPGS+W+ LLV
Sbjct: 7790351 RSAGLISGISEVDPIRWPGSRWKCLLV 7790431
Score = 39.1 bits (79), Expect(4) = 3e-022
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1 / +1
Query: 180 VRWEDGAECNGQDRVSPWEIEI 115
VRW+D AE +RVSPWEIE+
Sbjct: 10266379 VRWDDDAEFRRPNRVSPWEIEL 10266444
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,410,013,206
Number of Sequences: 438736
Number of extensions: 48175154
Number of successful extensions: 213836
Number of sequences better than 1.0e-020: 19
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 123491619912
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)