TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCA10g02.yg.2.1
(277 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AG024164.1| Oryza sativa (japonica cultivar-group) DNA,... 206 9e-052
gb|AC091090.1|AC091090 Oryza sativa (japonica cultivar-grou... 206 9e-052
dbj|D45890.1|RICSPS1 Oryza sativa DNA for sucrose phosphate... 206 9e-052
gb|AACV01002933.1| Oryza sativa (japonica cultivar-group) c... 206 9e-052
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 206 9e-052
ref|XM_463619.1| Oryza sativa (japonica cultivar-group), p... 206 9e-052
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 206 9e-052
dbj|AP003437.3| Oryza sativa (japonica cultivar-group) geno... 206 9e-052
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 206 9e-052
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 206 9e-052
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 206 9e-052
dbj|AK121341.1| Oryza sativa (japonica cultivar-group) cDNA... 204 6e-051
dbj|AG023731.1| Oryza sativa (japonica cultivar-group) DNA,... 177 7e-043
dbj|AG205918.1| Oryza sativa (japonica cultivar-group) DNA,... 177 7e-043
dbj|BA000044.2| Oryza sativa (japonica cultivar-group) geno... 115 9e-037
dbj|AP004041.2| Oryza sativa (japonica cultivar-group) geno... 115 9e-037
gb|AY360393.2| Oryza sativa (japonica cultivar-group) chrom... 115 9e-037
gb|AACV01017983.1| Oryza sativa (japonica cultivar-group) c... 115 9e-037
dbj|AK101676.1| Oryza sativa (japonica cultivar-group) cDNA... 115 9e-037
ref|XM_481429.1| Oryza sativa (japonica cultivar-group), mRNA 115 9e-037
ref|NT_107144.1| Oryza sativa (japonica cultivar-group) 100 6e-031
gb|CH401260.1| Oryza sativa (japonica cultivar-group) chrom... 100 6e-031
gb|AC147811.2| Oryza sativa (japonica cultivar-group) chrom... 100 6e-031
gb|AC135258.2| Oryza sativa (japonica cultivar-group) chrom... 100 6e-031
gb|AACV01022676.1| Oryza sativa (japonica cultivar-group) c... 100 6e-031
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 106 2e-030
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 106 2e-030
dbj|AP004066.2| Oryza sativa (japonica cultivar-group) geno... 106 2e-030
gb|AACV01003496.1| Oryza sativa (japonica cultivar-group) c... 106 2e-030
ref|XM_506734.1| PREDICTED Oryza sativa (japonica cultivar-... 106 2e-030
dbj|AK121486.1| Oryza sativa (japonica cultivar-group) cDNA... 106 2e-030
dbj|AK065273.1| Oryza sativa (japonica cultivar-group) cDNA... 106 2e-030
ref|XM_506735.1| PREDICTED Oryza sativa (japonica cultivar-... 106 2e-030
dbj|AK098898.1| Oryza sativa (japonica cultivar-group) cDNA... 106 2e-030
ref|XM_464358.1| Oryza sativa (japonica cultivar-group), mRNA 106 2e-030
gb|CB649251.1|CB649251 OSJNEb13B09.f OSJNEb Oryza sativa (j... 103 4e-029
gb|CB645118.1|CB645118 OSJNEb06K03.f OSJNEb Oryza sativa (j... 103 4e-029
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 103 8e-029
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 103 8e-029
dbj|AP003523.3| Oryza sativa (japonica cultivar-group) geno... 103 9e-029
dbj|AP003568.3| Oryza sativa (japonica cultivar-group) geno... 103 9e-029
gb|AACV01014670.1| Oryza sativa (japonica cultivar-group) c... 103 9e-029
gb|CB638899.1|CB638899 OSJNEa07N02.f OSJNEa Oryza sativa (j... 92 7e-026
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 115 2e-024
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 115 2e-024
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 115 2e-024
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 115 2e-024
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 106 7e-022
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 106 7e-022
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 103 6e-021
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 103 6e-021
gb|AQ364008.2|AQ364008 nbxb0060E04r CUGI Rice BAC Library O... 103 8e-021
>dbj|AG024164.1| Oryza sativa (japonica cultivar-group) DNA, clone:ND3060_0_102_1A,
3' flanking sequence of Tos17 insertion in rice strain
ND3060, genomic survey sequence
Length = 729
Score = 206 bits (445), Expect = 9e-052
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = -3 / +2
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEAL 96
RVDLFTRQVSSP+VDWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEAL
Sbjct: 53 RVDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 232
Query: 95 WPYLQEFVDGALAHILNMSKALGEQVGNGR 6
WPYLQEFVDGALAHILNMSKALGEQV NG+
Sbjct: 233 WPYLQEFVDGALAHILNMSKALGEQVSNGK 322
Score = 144 bits (308), Expect = 3e-033
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3 / -3
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 319 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 140
Query: 189 GTGA*HLRRLTIAPVHVRR*HLTSEEVH 272
GTG *H RL IAPVH RR*HLTS+++H
Sbjct: 139 GTGG*HFSRLPIAPVHFRR*HLTSKQIH 56
Score = 127 bits (273), Expect = 2e-028
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / +3
Query: 277 TGWTSSLVKCHLLTWTGAMVSRRRCYAPVPTMERGWVRVPEPTLCAYRVDHGINTSRRKH 98
T W LVKCHLL WTGAM S +C PVP ER VRV TLCA+R G +TS ++
Sbjct: 51 TEWICLLVKCHLLKWTGAMGSLLKC*PPVPLTEREAVRVLVRTLCAFRAVQGTSTSVKRP 230
Query: 97 CGLTSKSLSMELLRISLTCPRLWENRLEMG 8
CGLTSKSLS EL RIS TCPRLW NRL MG
Sbjct: 231 CGLTSKSLSTELSRIS*TCPRLWGNRLAMG 320
Score = 117 bits (250), Expect = 3e-025
Identities = 56/91 (61%), Positives = 64/91 (70%)
Frame = -2 / +1
Query: 276 QGGPLHSSSVIS*RGLELW*ADGDVMLRFQRWRGDG*ECRSLHCAHTVWTTG*IPQEGST 97
Q G ++SSSVIS* GLELW A +V LRF RG *EC +HCAH+V + G +P
Sbjct: 52 QSGSVYSSSVIS*SGLELWGAY*NVNLRFH*RRGKR*ECWCVHCAHSVRSKGQVPP*RGP 231
Query: 96 VALPPRVCRWSSCAYP*HVQGSGRTGWKWEA 4
VALPPRVCR SS AYP HVQGSG TG +WEA
Sbjct: 232 VALPPRVCRRSSRAYPEHVQGSGGTG*QWEA 324
Score = 112 bits (240), Expect = 7e-024
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +2 / -2
Query: 5 ASHFQPVLPEPWTC*GYAQELHRQTLGGKATVLPS*GIYPVVHTVCAQCRLRHSHPSPLH 184
ASH PV PEPWTC GYA+EL RQTLGGKAT G P+ T CAQC +HSH PL
Sbjct: 323 ASHC*PVPPEPWTCSGYARELRRQTLGGKATGPLYGGTCPLDRTECAQCTHQHSHRFPLR 144
Query: 185 RWNRSITXXXXXXXXXXRQEMTLDE*RGPPC 277
+WNR +T QEMTLDE* P C
Sbjct: 143 QWNRRLTFQ*APHSSSPLQEMTLDE*TDPLC 51
Score = 101 bits (216), Expect(2) = 6e-031
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = +1 / -1
Query: 1 TGLPFPTCSPRALDMLRICARAPSTNSWR*GHSASFLRYLSRGPHGMRTM 150
T P TCSPRALDM RICARAPSTNSWR*GH AS RYLS GPHGMRTM
Sbjct: 327 TSFPLLTCSPRALDMFRICARAPSTNSWR*GHRASLRRYLSLGPHGMRTM 178
Score = 52.8 bits (109), Expect(2) = 6e-031
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1 / -1
Query: 202 NISVGSP*LQSTSGDDT*RVKRSTL 276
NISVGSP*LQSTSGDDT*RV RSTL
Sbjct: 126 NISVGSP*LQSTSGDDT*RVNRSTL 52
>gb|AC091090.1|AC091090 Oryza sativa (japonica cultivar-group) chromosome 1 clone P0678F11, ***
SEQUENCING IN PROGRESS ***, 3 ordered pieces
Length = 155574
Score = 206 bits (445), Expect = 9e-052
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = -3 / +2
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEAL 96
RVDLFTRQVSSP+VDWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEAL
Sbjct: 113918 RVDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 114097
Query: 95 WPYLQEFVDGALAHILNMSKALGEQVGNGR 6
WPYLQEFVDGALAHILNMSKALGEQV NG+
Sbjct: 114098 WPYLQEFVDGALAHILNMSKALGEQVSNGK 114187
Score = 144 bits (308), Expect = 3e-033
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3 / -3
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 114184 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 114005
Query: 189 GTGA*HLRRLTIAPVHVRR*HLTSEEVH 272
GTG *H RL IAPVH RR*HLTS+++H
Sbjct: 114004 GTGG*HFSRLPIAPVHFRR*HLTSKQIH 113921
Score = 127 bits (273), Expect = 2e-028
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / +3
Query: 277 TGWTSSLVKCHLLTWTGAMVSRRRCYAPVPTMERGWVRVPEPTLCAYRVDHGINTSRRKH 98
T W LVKCHLL WTGAM S +C PVP ER VRV TLCA+R G +TS ++
Sbjct: 113916 TEWICLLVKCHLLKWTGAMGSLLKC*PPVPLTEREAVRVLVRTLCAFRAVQGTSTSVKRP 114095
Query: 97 CGLTSKSLSMELLRISLTCPRLWENRLEMG 8
CGLTSKSLS EL RIS TCPRLW NRL MG
Sbjct: 114096 CGLTSKSLSTELSRIS*TCPRLWGNRLAMG 114185
Score = 117 bits (250), Expect = 3e-025
Identities = 56/91 (61%), Positives = 64/91 (70%)
Frame = -2 / +1
Query: 276 QGGPLHSSSVIS*RGLELW*ADGDVMLRFQRWRGDG*ECRSLHCAHTVWTTG*IPQEGST 97
Q G ++SSSVIS* GLELW A +V LRF RG *EC +HCAH+V + G +P
Sbjct: 113917 QSGSVYSSSVIS*SGLELWGAY*NVNLRFH*RRGKR*ECWCVHCAHSVRSKGQVPP*RGP 114096
Query: 96 VALPPRVCRWSSCAYP*HVQGSGRTGWKWEA 4
VALPPRVCR SS AYP HVQGSG TG +WEA
Sbjct: 114097 VALPPRVCRRSSRAYPEHVQGSGGTG*QWEA 114189
Score = 112 bits (240), Expect = 7e-024
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +2 / -2
Query: 5 ASHFQPVLPEPWTC*GYAQELHRQTLGGKATVLPS*GIYPVVHTVCAQCRLRHSHPSPLH 184
ASH PV PEPWTC GYA+EL RQTLGGKAT G P+ T CAQC +HSH PL
Sbjct: 114188 ASHC*PVPPEPWTCSGYARELRRQTLGGKATGPLYGGTCPLDRTECAQCTHQHSHRFPLR 114009
Query: 185 RWNRSITXXXXXXXXXXRQEMTLDE*RGPPC 277
+WNR +T QEMTLDE* P C
Sbjct: 114008 QWNRRLTFQ*APHSSSPLQEMTLDE*TDPLC 113916
Score = 101 bits (216), Expect(2) = 1e-030
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = +1 / -1
Query: 1 TGLPFPTCSPRALDMLRICARAPSTNSWR*GHSASFLRYLSRGPHGMRTM 150
T P TCSPRALDM RICARAPSTNSWR*GH AS RYLS GPHGMRTM
Sbjct: 114192 TSFPLLTCSPRALDMFRICARAPSTNSWR*GHRASLRRYLSLGPHGMRTM 114043
Score = 52.8 bits (109), Expect(2) = 1e-030
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1 / -1
Query: 202 NISVGSP*LQSTSGDDT*RVKRSTL 276
NISVGSP*LQSTSGDDT*RV RSTL
Sbjct: 113991 NISVGSP*LQSTSGDDT*RVNRSTL 113917
>dbj|D45890.1|RICSPS1 Oryza sativa DNA for sucrose phosphate synthase, complete cds
Length = 9181
Score = 206 bits (445), Expect = 9e-052
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = -3 / +2
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEAL 96
RVDLFTRQVSSP+VDWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEAL
Sbjct: 4757 RVDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 4936
Query: 95 WPYLQEFVDGALAHILNMSKALGEQVGNGR 6
WPYLQEFVDGALAHILNMSKALGEQV NG+
Sbjct: 4937 WPYLQEFVDGALAHILNMSKALGEQVSNGK 5026
Score = 144 bits (308), Expect = 3e-033
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3 / -1
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 5023 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 4844
Query: 189 GTGA*HLRRLTIAPVHVRR*HLTSEEVH 272
GTG *H RL IAPVH RR*HLTS+++H
Sbjct: 4843 GTGG*HFSRLPIAPVHFRR*HLTSKQIH 4760
Score = 127 bits (273), Expect = 2e-028
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / +3
Query: 277 TGWTSSLVKCHLLTWTGAMVSRRRCYAPVPTMERGWVRVPEPTLCAYRVDHGINTSRRKH 98
T W LVKCHLL WTGAM S +C PVP ER VRV TLCA+R G +TS ++
Sbjct: 4755 TEWICLLVKCHLLKWTGAMGSLLKC*PPVPLTEREAVRVLVRTLCAFRAVQGTSTSVKRP 4934
Query: 97 CGLTSKSLSMELLRISLTCPRLWENRLEMG 8
CGLTSKSLS EL RIS TCPRLW NRL MG
Sbjct: 4935 CGLTSKSLSTELSRIS*TCPRLWGNRLAMG 5024
Score = 117 bits (250), Expect = 3e-025
Identities = 56/91 (61%), Positives = 64/91 (70%)
Frame = -2 / +1
Query: 276 QGGPLHSSSVIS*RGLELW*ADGDVMLRFQRWRGDG*ECRSLHCAHTVWTTG*IPQEGST 97
Q G ++SSSVIS* GLELW A +V LRF RG *EC +HCAH+V + G +P
Sbjct: 4756 QSGSVYSSSVIS*SGLELWGAY*NVNLRFH*RRGKR*ECWCVHCAHSVRSKGQVPP*RGP 4935
Query: 96 VALPPRVCRWSSCAYP*HVQGSGRTGWKWEA 4
VALPPRVCR SS AYP HVQGSG TG +WEA
Sbjct: 4936 VALPPRVCRRSSRAYPEHVQGSGGTG*QWEA 5028
Score = 112 bits (240), Expect = 7e-024
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +2 / -3
Query: 5 ASHFQPVLPEPWTC*GYAQELHRQTLGGKATVLPS*GIYPVVHTVCAQCRLRHSHPSPLH 184
ASH PV PEPWTC GYA+EL RQTLGGKAT G P+ T CAQC +HSH PL
Sbjct: 5027 ASHC*PVPPEPWTCSGYARELRRQTLGGKATGPLYGGTCPLDRTECAQCTHQHSHRFPLR 4848
Query: 185 RWNRSITXXXXXXXXXXRQEMTLDE*RGPPC 277
+WNR +T QEMTLDE* P C
Sbjct: 4847 QWNRRLTFQ*APHSSSPLQEMTLDE*TDPLC 4755
Score = 101 bits (216), Expect(2) = 2e-030
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = +1 / -2
Query: 1 TGLPFPTCSPRALDMLRICARAPSTNSWR*GHSASFLRYLSRGPHGMRTM 150
T P TCSPRALDM RICARAPSTNSWR*GH AS RYLS GPHGMRTM
Sbjct: 5031 TSFPLLTCSPRALDMFRICARAPSTNSWR*GHRASLRRYLSLGPHGMRTM 4882
Score = 52.8 bits (109), Expect(2) = 2e-030
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1 / -2
Query: 202 NISVGSP*LQSTSGDDT*RVKRSTL 276
NISVGSP*LQSTSGDDT*RV RSTL
Sbjct: 4830 NISVGSP*LQSTSGDDT*RVNRSTL 4756
>gb|AACV01002933.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002933, whole
genome shotgun sequence
Length = 31042
Score = 206 bits (445), Expect = 9e-052
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = -3 / +2
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEAL 96
RVDLFTRQVSSP+VDWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEAL
Sbjct: 9170 RVDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 9349
Query: 95 WPYLQEFVDGALAHILNMSKALGEQVGNGR 6
WPYLQEFVDGALAHILNMSKALGEQV NG+
Sbjct: 9350 WPYLQEFVDGALAHILNMSKALGEQVSNGK 9439
Score = 144 bits (308), Expect = 3e-033
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3 / -1
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 9436 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 9257
Query: 189 GTGA*HLRRLTIAPVHVRR*HLTSEEVH 272
GTG *H RL IAPVH RR*HLTS+++H
Sbjct: 9256 GTGG*HFSRLPIAPVHFRR*HLTSKQIH 9173
Score = 127 bits (273), Expect = 2e-028
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / +3
Query: 277 TGWTSSLVKCHLLTWTGAMVSRRRCYAPVPTMERGWVRVPEPTLCAYRVDHGINTSRRKH 98
T W LVKCHLL WTGAM S +C PVP ER VRV TLCA+R G +TS ++
Sbjct: 9168 TEWICLLVKCHLLKWTGAMGSLLKC*PPVPLTEREAVRVLVRTLCAFRAVQGTSTSVKRP 9347
Query: 97 CGLTSKSLSMELLRISLTCPRLWENRLEMG 8
CGLTSKSLS EL RIS TCPRLW NRL MG
Sbjct: 9348 CGLTSKSLSTELSRIS*TCPRLWGNRLAMG 9437
Score = 117 bits (250), Expect = 3e-025
Identities = 56/91 (61%), Positives = 64/91 (70%)
Frame = -2 / +1
Query: 276 QGGPLHSSSVIS*RGLELW*ADGDVMLRFQRWRGDG*ECRSLHCAHTVWTTG*IPQEGST 97
Q G ++SSSVIS* GLELW A +V LRF RG *EC +HCAH+V + G +P
Sbjct: 9169 QSGSVYSSSVIS*SGLELWGAY*NVNLRFH*RRGKR*ECWCVHCAHSVRSKGQVPP*RGP 9348
Query: 96 VALPPRVCRWSSCAYP*HVQGSGRTGWKWEA 4
VALPPRVCR SS AYP HVQGSG TG +WEA
Sbjct: 9349 VALPPRVCRRSSRAYPEHVQGSGGTG*QWEA 9441
Score = 112 bits (240), Expect = 7e-024
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +2 / -3
Query: 5 ASHFQPVLPEPWTC*GYAQELHRQTLGGKATVLPS*GIYPVVHTVCAQCRLRHSHPSPLH 184
ASH PV PEPWTC GYA+EL RQTLGGKAT G P+ T CAQC +HSH PL
Sbjct: 9440 ASHC*PVPPEPWTCSGYARELRRQTLGGKATGPLYGGTCPLDRTECAQCTHQHSHRFPLR 9261
Query: 185 RWNRSITXXXXXXXXXXRQEMTLDE*RGPPC 277
+WNR +T QEMTLDE* P C
Sbjct: 9260 QWNRRLTFQ*APHSSSPLQEMTLDE*TDPLC 9168
Score = 101 bits (216), Expect(2) = 1e-030
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = +1 / -2
Query: 1 TGLPFPTCSPRALDMLRICARAPSTNSWR*GHSASFLRYLSRGPHGMRTM 150
T P TCSPRALDM RICARAPSTNSWR*GH AS RYLS GPHGMRTM
Sbjct: 9444 TSFPLLTCSPRALDMFRICARAPSTNSWR*GHRASLRRYLSLGPHGMRTM 9295
Score = 52.8 bits (109), Expect(2) = 1e-030
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1 / -2
Query: 202 NISVGSP*LQSTSGDDT*RVKRSTL 276
NISVGSP*LQSTSGDDT*RV RSTL
Sbjct: 9243 NISVGSP*LQSTSGDDT*RVNRSTL 9169
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 206 bits (445), Expect = 9e-052
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = -3 / -1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEAL 96
RVDLFTRQVSSP+VDWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEAL
Sbjct: 40179243 RVDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 40179064
Query: 95 WPYLQEFVDGALAHILNMSKALGEQVGNGR 6
WPYLQEFVDGALAHILNMSKALGEQV NG+
Sbjct: 40179063 WPYLQEFVDGALAHILNMSKALGEQVSNGK 40178974
Score = 144 bits (308), Expect = 3e-033
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3 / +1
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 40178977 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 40179156
Query: 189 GTGA*HLRRLTIAPVHVRR*HLTSEEVH 272
GTG *H RL IAPVH RR*HLTS+++H
Sbjct: 40179157 GTGG*HFSRLPIAPVHFRR*HLTSKQIH 40179240
Score = 127 bits (273), Expect = 2e-028
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -2
Query: 277 TGWTSSLVKCHLLTWTGAMVSRRRCYAPVPTMERGWVRVPEPTLCAYRVDHGINTSRRKH 98
T W LVKCHLL WTGAM S +C PVP ER VRV TLCA+R G +TS ++
Sbjct: 40179245 TEWICLLVKCHLLKWTGAMGSLLKC*PPVPLTEREAVRVLVRTLCAFRAVQGTSTSVKRP 40179066
Query: 97 CGLTSKSLSMELLRISLTCPRLWENRLEMG 8
CGLTSKSLS EL RIS TCPRLW NRL MG
Sbjct: 40179065 CGLTSKSLSTELSRIS*TCPRLWGNRLAMG 40178976
Score = 117 bits (250), Expect = 3e-025
Identities = 56/91 (61%), Positives = 64/91 (70%)
Frame = -2 / -3
Query: 276 QGGPLHSSSVIS*RGLELW*ADGDVMLRFQRWRGDG*ECRSLHCAHTVWTTG*IPQEGST 97
Q G ++SSSVIS* GLELW A +V LRF RG *EC +HCAH+V + G +P
Sbjct: 40179244 QSGSVYSSSVIS*SGLELWGAY*NVNLRFH*RRGKR*ECWCVHCAHSVRSKGQVPP*RGP 40179065
Query: 96 VALPPRVCRWSSCAYP*HVQGSGRTGWKWEA 4
VALPPRVCR SS AYP HVQGSG TG +WEA
Sbjct: 40179064 VALPPRVCRRSSRAYPEHVQGSGGTG*QWEA 40178972
Score = 112 bits (240), Expect = 7e-024
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +2 / +3
Query: 5 ASHFQPVLPEPWTC*GYAQELHRQTLGGKATVLPS*GIYPVVHTVCAQCRLRHSHPSPLH 184
ASH PV PEPWTC GYA+EL RQTLGGKAT G P+ T CAQC +HSH PL
Sbjct: 40178973 ASHC*PVPPEPWTCSGYARELRRQTLGGKATGPLYGGTCPLDRTECAQCTHQHSHRFPLR 40179152
Query: 185 RWNRSITXXXXXXXXXXRQEMTLDE*RGPPC 277
+WNR +T QEMTLDE* P C
Sbjct: 40179153 QWNRRLTFQ*APHSSSPLQEMTLDE*TDPLC 40179245
>ref|XM_463619.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 3303
Score = 206 bits (445), Expect = 9e-052
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = -3 / +1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEAL 96
RVDLFTRQVSSP+VDWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEAL
Sbjct: 766 RVDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 945
Query: 95 WPYLQEFVDGALAHILNMSKALGEQVGNGR 6
WPYLQEFVDGALAHILNMSKALGEQV NG+
Sbjct: 946 WPYLQEFVDGALAHILNMSKALGEQVSNGK 1035
Score = 144 bits (308), Expect = 3e-033
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3 / -1
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 1032 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 853
Query: 189 GTGA*HLRRLTIAPVHVRR*HLTSEEVH 272
GTG *H RL IAPVH RR*HLTS+++H
Sbjct: 852 GTGG*HFSRLPIAPVHFRR*HLTSKQIH 769
Score = 127 bits (273), Expect = 2e-028
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / +2
Query: 277 TGWTSSLVKCHLLTWTGAMVSRRRCYAPVPTMERGWVRVPEPTLCAYRVDHGINTSRRKH 98
T W LVKCHLL WTGAM S +C PVP ER VRV TLCA+R G +TS ++
Sbjct: 764 TEWICLLVKCHLLKWTGAMGSLLKC*PPVPLTEREAVRVLVRTLCAFRAVQGTSTSVKRP 943
Query: 97 CGLTSKSLSMELLRISLTCPRLWENRLEMG 8
CGLTSKSLS EL RIS TCPRLW NRL MG
Sbjct: 944 CGLTSKSLSTELSRIS*TCPRLWGNRLAMG 1033
Score = 117 bits (250), Expect = 3e-025
Identities = 56/91 (61%), Positives = 64/91 (70%)
Frame = -2 / +3
Query: 276 QGGPLHSSSVIS*RGLELW*ADGDVMLRFQRWRGDG*ECRSLHCAHTVWTTG*IPQEGST 97
Q G ++SSSVIS* GLELW A +V LRF RG *EC +HCAH+V + G +P
Sbjct: 765 QSGSVYSSSVIS*SGLELWGAY*NVNLRFH*RRGKR*ECWCVHCAHSVRSKGQVPP*RGP 944
Query: 96 VALPPRVCRWSSCAYP*HVQGSGRTGWKWEA 4
VALPPRVCR SS AYP HVQGSG TG +WEA
Sbjct: 945 VALPPRVCRRSSRAYPEHVQGSGGTG*QWEA 1037
Score = 112 bits (240), Expect = 7e-024
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +2 / -3
Query: 5 ASHFQPVLPEPWTC*GYAQELHRQTLGGKATVLPS*GIYPVVHTVCAQCRLRHSHPSPLH 184
ASH PV PEPWTC GYA+EL RQTLGGKAT G P+ T CAQC +HSH PL
Sbjct: 1036 ASHC*PVPPEPWTCSGYARELRRQTLGGKATGPLYGGTCPLDRTECAQCTHQHSHRFPLR 857
Query: 185 RWNRSITXXXXXXXXXXRQEMTLDE*RGPPC 277
+WNR +T QEMTLDE* P C
Sbjct: 856 QWNRRLTFQ*APHSSSPLQEMTLDE*TDPLC 764
Score = 101 bits (216), Expect(2) = 2e-030
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = +1 / -2
Query: 1 TGLPFPTCSPRALDMLRICARAPSTNSWR*GHSASFLRYLSRGPHGMRTM 150
T P TCSPRALDM RICARAPSTNSWR*GH AS RYLS GPHGMRTM
Sbjct: 1040 TSFPLLTCSPRALDMFRICARAPSTNSWR*GHRASLRRYLSLGPHGMRTM 891
Score = 52.8 bits (109), Expect(2) = 2e-030
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1 / -2
Query: 202 NISVGSP*LQSTSGDDT*RVKRSTL 276
NISVGSP*LQSTSGDDT*RV RSTL
Sbjct: 839 NISVGSP*LQSTSGDDT*RVNRSTL 765
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 206 bits (445), Expect = 9e-052
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = -3 / -1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEAL 96
RVDLFTRQVSSP+VDWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEAL
Sbjct: 14626626 RVDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 14626447
Query: 95 WPYLQEFVDGALAHILNMSKALGEQVGNGR 6
WPYLQEFVDGALAHILNMSKALGEQV NG+
Sbjct: 14626446 WPYLQEFVDGALAHILNMSKALGEQVSNGK 14626357
Score = 144 bits (308), Expect = 3e-033
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3 / +1
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 14626360 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 14626539
Query: 189 GTGA*HLRRLTIAPVHVRR*HLTSEEVH 272
GTG *H RL IAPVH RR*HLTS+++H
Sbjct: 14626540 GTGG*HFSRLPIAPVHFRR*HLTSKQIH 14626623
Score = 127 bits (273), Expect = 2e-028
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -2
Query: 277 TGWTSSLVKCHLLTWTGAMVSRRRCYAPVPTMERGWVRVPEPTLCAYRVDHGINTSRRKH 98
T W LVKCHLL WTGAM S +C PVP ER VRV TLCA+R G +TS ++
Sbjct: 14626628 TEWICLLVKCHLLKWTGAMGSLLKC*PPVPLTEREAVRVLVRTLCAFRAVQGTSTSVKRP 14626449
Query: 97 CGLTSKSLSMELLRISLTCPRLWENRLEMG 8
CGLTSKSLS EL RIS TCPRLW NRL MG
Sbjct: 14626448 CGLTSKSLSTELSRIS*TCPRLWGNRLAMG 14626359
Score = 117 bits (250), Expect = 3e-025
Identities = 56/91 (61%), Positives = 64/91 (70%)
Frame = -2 / -3
Query: 276 QGGPLHSSSVIS*RGLELW*ADGDVMLRFQRWRGDG*ECRSLHCAHTVWTTG*IPQEGST 97
Q G ++SSSVIS* GLELW A +V LRF RG *EC +HCAH+V + G +P
Sbjct: 14626627 QSGSVYSSSVIS*SGLELWGAY*NVNLRFH*RRGKR*ECWCVHCAHSVRSKGQVPP*RGP 14626448
Query: 96 VALPPRVCRWSSCAYP*HVQGSGRTGWKWEA 4
VALPPRVCR SS AYP HVQGSG TG +WEA
Sbjct: 14626447 VALPPRVCRRSSRAYPEHVQGSGGTG*QWEA 14626355
Score = 112 bits (240), Expect = 7e-024
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +2 / +3
Query: 5 ASHFQPVLPEPWTC*GYAQELHRQTLGGKATVLPS*GIYPVVHTVCAQCRLRHSHPSPLH 184
ASH PV PEPWTC GYA+EL RQTLGGKAT G P+ T CAQC +HSH PL
Sbjct: 14626356 ASHC*PVPPEPWTCSGYARELRRQTLGGKATGPLYGGTCPLDRTECAQCTHQHSHRFPLR 14626535
Query: 185 RWNRSITXXXXXXXXXXRQEMTLDE*RGPPC 277
+WNR +T QEMTLDE* P C
Sbjct: 14626536 QWNRRLTFQ*APHSSSPLQEMTLDE*TDPLC 14626628
Score = 101 bits (216), Expect(2) = 1e-030
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = +1 / +2
Query: 1 TGLPFPTCSPRALDMLRICARAPSTNSWR*GHSASFLRYLSRGPHGMRTM 150
T P TCSPRALDM RICARAPSTNSWR*GH AS RYLS GPHGMRTM
Sbjct: 14626352 TSFPLLTCSPRALDMFRICARAPSTNSWR*GHRASLRRYLSLGPHGMRTM 14626501
Score = 52.8 bits (109), Expect(2) = 1e-030
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1 / +2
Query: 202 NISVGSP*LQSTSGDDT*RVKRSTL 276
NISVGSP*LQSTSGDDT*RV RSTL
Sbjct: 14626553 NISVGSP*LQSTSGDDT*RVNRSTL 14626627
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0678F11
Length = 154292
Score = 206 bits (445), Expect = 9e-052
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = -3 / -1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEAL 96
RVDLFTRQVSSP+VDWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEAL
Sbjct: 41657 RVDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 41478
Query: 95 WPYLQEFVDGALAHILNMSKALGEQVGNGR 6
WPYLQEFVDGALAHILNMSKALGEQV NG+
Sbjct: 41477 WPYLQEFVDGALAHILNMSKALGEQVSNGK 41388
Score = 144 bits (308), Expect = 3e-033
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3 / +3
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 41391 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 41570
Query: 189 GTGA*HLRRLTIAPVHVRR*HLTSEEVH 272
GTG *H RL IAPVH RR*HLTS+++H
Sbjct: 41571 GTGG*HFSRLPIAPVHFRR*HLTSKQIH 41654
Score = 127 bits (273), Expect = 2e-028
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -2
Query: 277 TGWTSSLVKCHLLTWTGAMVSRRRCYAPVPTMERGWVRVPEPTLCAYRVDHGINTSRRKH 98
T W LVKCHLL WTGAM S +C PVP ER VRV TLCA+R G +TS ++
Sbjct: 41659 TEWICLLVKCHLLKWTGAMGSLLKC*PPVPLTEREAVRVLVRTLCAFRAVQGTSTSVKRP 41480
Query: 97 CGLTSKSLSMELLRISLTCPRLWENRLEMG 8
CGLTSKSLS EL RIS TCPRLW NRL MG
Sbjct: 41479 CGLTSKSLSTELSRIS*TCPRLWGNRLAMG 41390
Score = 117 bits (250), Expect = 3e-025
Identities = 56/91 (61%), Positives = 64/91 (70%)
Frame = -2 / -3
Query: 276 QGGPLHSSSVIS*RGLELW*ADGDVMLRFQRWRGDG*ECRSLHCAHTVWTTG*IPQEGST 97
Q G ++SSSVIS* GLELW A +V LRF RG *EC +HCAH+V + G +P
Sbjct: 41658 QSGSVYSSSVIS*SGLELWGAY*NVNLRFH*RRGKR*ECWCVHCAHSVRSKGQVPP*RGP 41479
Query: 96 VALPPRVCRWSSCAYP*HVQGSGRTGWKWEA 4
VALPPRVCR SS AYP HVQGSG TG +WEA
Sbjct: 41478 VALPPRVCRRSSRAYPEHVQGSGGTG*QWEA 41386
Score = 112 bits (240), Expect = 7e-024
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +2 / +2
Query: 5 ASHFQPVLPEPWTC*GYAQELHRQTLGGKATVLPS*GIYPVVHTVCAQCRLRHSHPSPLH 184
ASH PV PEPWTC GYA+EL RQTLGGKAT G P+ T CAQC +HSH PL
Sbjct: 41387 ASHC*PVPPEPWTCSGYARELRRQTLGGKATGPLYGGTCPLDRTECAQCTHQHSHRFPLR 41566
Query: 185 RWNRSITXXXXXXXXXXRQEMTLDE*RGPPC 277
+WNR +T QEMTLDE* P C
Sbjct: 41567 QWNRRLTFQ*APHSSSPLQEMTLDE*TDPLC 41659
Score = 101 bits (216), Expect(2) = 1e-030
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = +1 / +1
Query: 1 TGLPFPTCSPRALDMLRICARAPSTNSWR*GHSASFLRYLSRGPHGMRTM 150
T P TCSPRALDM RICARAPSTNSWR*GH AS RYLS GPHGMRTM
Sbjct: 41383 TSFPLLTCSPRALDMFRICARAPSTNSWR*GHRASLRRYLSLGPHGMRTM 41532
Score = 52.8 bits (109), Expect(2) = 1e-030
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1 / +1
Query: 202 NISVGSP*LQSTSGDDT*RVKRSTL 276
NISVGSP*LQSTSGDDT*RV RSTL
Sbjct: 41584 NISVGSP*LQSTSGDDT*RVNRSTL 41658
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 206 bits (445), Expect = 9e-052
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = -3 / -1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEAL 96
RVDLFTRQVSSP+VDWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEAL
Sbjct: 14386864 RVDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 14386685
Query: 95 WPYLQEFVDGALAHILNMSKALGEQVGNGR 6
WPYLQEFVDGALAHILNMSKALGEQV NG+
Sbjct: 14386684 WPYLQEFVDGALAHILNMSKALGEQVSNGK 14386595
Score = 144 bits (308), Expect = 3e-033
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3 / +2
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 14386598 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 14386777
Query: 189 GTGA*HLRRLTIAPVHVRR*HLTSEEVH 272
GTG *H RL IAPVH RR*HLTS+++H
Sbjct: 14386778 GTGG*HFSRLPIAPVHFRR*HLTSKQIH 14386861
Score = 127 bits (273), Expect = 2e-028
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -2
Query: 277 TGWTSSLVKCHLLTWTGAMVSRRRCYAPVPTMERGWVRVPEPTLCAYRVDHGINTSRRKH 98
T W LVKCHLL WTGAM S +C PVP ER VRV TLCA+R G +TS ++
Sbjct: 14386866 TEWICLLVKCHLLKWTGAMGSLLKC*PPVPLTEREAVRVLVRTLCAFRAVQGTSTSVKRP 14386687
Query: 97 CGLTSKSLSMELLRISLTCPRLWENRLEMG 8
CGLTSKSLS EL RIS TCPRLW NRL MG
Sbjct: 14386686 CGLTSKSLSTELSRIS*TCPRLWGNRLAMG 14386597
Score = 117 bits (250), Expect = 3e-025
Identities = 56/91 (61%), Positives = 64/91 (70%)
Frame = -2 / -3
Query: 276 QGGPLHSSSVIS*RGLELW*ADGDVMLRFQRWRGDG*ECRSLHCAHTVWTTG*IPQEGST 97
Q G ++SSSVIS* GLELW A +V LRF RG *EC +HCAH+V + G +P
Sbjct: 14386865 QSGSVYSSSVIS*SGLELWGAY*NVNLRFH*RRGKR*ECWCVHCAHSVRSKGQVPP*RGP 14386686
Query: 96 VALPPRVCRWSSCAYP*HVQGSGRTGWKWEA 4
VALPPRVCR SS AYP HVQGSG TG +WEA
Sbjct: 14386685 VALPPRVCRRSSRAYPEHVQGSGGTG*QWEA 14386593
Score = 112 bits (240), Expect = 7e-024
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +2 / +1
Query: 5 ASHFQPVLPEPWTC*GYAQELHRQTLGGKATVLPS*GIYPVVHTVCAQCRLRHSHPSPLH 184
ASH PV PEPWTC GYA+EL RQTLGGKAT G P+ T CAQC +HSH PL
Sbjct: 14386594 ASHC*PVPPEPWTCSGYARELRRQTLGGKATGPLYGGTCPLDRTECAQCTHQHSHRFPLR 14386773
Query: 185 RWNRSITXXXXXXXXXXRQEMTLDE*RGPPC 277
+WNR +T QEMTLDE* P C
Sbjct: 14386774 QWNRRLTFQ*APHSSSPLQEMTLDE*TDPLC 14386866
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 206 bits (445), Expect = 9e-052
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = -3 / -1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEAL 96
RVDLFTRQVSSP+VDWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEAL
Sbjct: 39588585 RVDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 39588406
Query: 95 WPYLQEFVDGALAHILNMSKALGEQVGNGR 6
WPYLQEFVDGALAHILNMSKALGEQV NG+
Sbjct: 39588405 WPYLQEFVDGALAHILNMSKALGEQVSNGK 39588316
Score = 144 bits (308), Expect = 3e-033
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3 / +1
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 39588319 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 39588498
Query: 189 GTGA*HLRRLTIAPVHVRR*HLTSEEVH 272
GTG *H RL IAPVH RR*HLTS+++H
Sbjct: 39588499 GTGG*HFSRLPIAPVHFRR*HLTSKQIH 39588582
Score = 127 bits (273), Expect = 2e-028
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -2
Query: 277 TGWTSSLVKCHLLTWTGAMVSRRRCYAPVPTMERGWVRVPEPTLCAYRVDHGINTSRRKH 98
T W LVKCHLL WTGAM S +C PVP ER VRV TLCA+R G +TS ++
Sbjct: 39588587 TEWICLLVKCHLLKWTGAMGSLLKC*PPVPLTEREAVRVLVRTLCAFRAVQGTSTSVKRP 39588408
Query: 97 CGLTSKSLSMELLRISLTCPRLWENRLEMG 8
CGLTSKSLS EL RIS TCPRLW NRL MG
Sbjct: 39588407 CGLTSKSLSTELSRIS*TCPRLWGNRLAMG 39588318
Score = 117 bits (250), Expect = 3e-025
Identities = 56/91 (61%), Positives = 64/91 (70%)
Frame = -2 / -3
Query: 276 QGGPLHSSSVIS*RGLELW*ADGDVMLRFQRWRGDG*ECRSLHCAHTVWTTG*IPQEGST 97
Q G ++SSSVIS* GLELW A +V LRF RG *EC +HCAH+V + G +P
Sbjct: 39588586 QSGSVYSSSVIS*SGLELWGAY*NVNLRFH*RRGKR*ECWCVHCAHSVRSKGQVPP*RGP 39588407
Query: 96 VALPPRVCRWSSCAYP*HVQGSGRTGWKWEA 4
VALPPRVCR SS AYP HVQGSG TG +WEA
Sbjct: 39588406 VALPPRVCRRSSRAYPEHVQGSGGTG*QWEA 39588314
Score = 112 bits (240), Expect = 7e-024
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +2 / +3
Query: 5 ASHFQPVLPEPWTC*GYAQELHRQTLGGKATVLPS*GIYPVVHTVCAQCRLRHSHPSPLH 184
ASH PV PEPWTC GYA+EL RQTLGGKAT G P+ T CAQC +HSH PL
Sbjct: 39588315 ASHC*PVPPEPWTCSGYARELRRQTLGGKATGPLYGGTCPLDRTECAQCTHQHSHRFPLR 39588494
Query: 185 RWNRSITXXXXXXXXXXRQEMTLDE*RGPPC 277
+WNR +T QEMTLDE* P C
Sbjct: 39588495 QWNRRLTFQ*APHSSSPLQEMTLDE*TDPLC 39588587
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 206 bits (445), Expect = 9e-052
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = -3 / -1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEAL 96
RVDLFTRQVSSP+VDWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEAL
Sbjct: 40098573 RVDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 40098394
Query: 95 WPYLQEFVDGALAHILNMSKALGEQVGNGR 6
WPYLQEFVDGALAHILNMSKALGEQV NG+
Sbjct: 40098393 WPYLQEFVDGALAHILNMSKALGEQVSNGK 40098304
Score = 144 bits (308), Expect = 3e-033
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3 / +1
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 40098307 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 40098486
Query: 189 GTGA*HLRRLTIAPVHVRR*HLTSEEVH 272
GTG *H RL IAPVH RR*HLTS+++H
Sbjct: 40098487 GTGG*HFSRLPIAPVHFRR*HLTSKQIH 40098570
Score = 127 bits (273), Expect = 2e-028
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -2
Query: 277 TGWTSSLVKCHLLTWTGAMVSRRRCYAPVPTMERGWVRVPEPTLCAYRVDHGINTSRRKH 98
T W LVKCHLL WTGAM S +C PVP ER VRV TLCA+R G +TS ++
Sbjct: 40098575 TEWICLLVKCHLLKWTGAMGSLLKC*PPVPLTEREAVRVLVRTLCAFRAVQGTSTSVKRP 40098396
Query: 97 CGLTSKSLSMELLRISLTCPRLWENRLEMG 8
CGLTSKSLS EL RIS TCPRLW NRL MG
Sbjct: 40098395 CGLTSKSLSTELSRIS*TCPRLWGNRLAMG 40098306
Score = 117 bits (250), Expect = 3e-025
Identities = 56/91 (61%), Positives = 64/91 (70%)
Frame = -2 / -3
Query: 276 QGGPLHSSSVIS*RGLELW*ADGDVMLRFQRWRGDG*ECRSLHCAHTVWTTG*IPQEGST 97
Q G ++SSSVIS* GLELW A +V LRF RG *EC +HCAH+V + G +P
Sbjct: 40098574 QSGSVYSSSVIS*SGLELWGAY*NVNLRFH*RRGKR*ECWCVHCAHSVRSKGQVPP*RGP 40098395
Query: 96 VALPPRVCRWSSCAYP*HVQGSGRTGWKWEA 4
VALPPRVCR SS AYP HVQGSG TG +WEA
Sbjct: 40098394 VALPPRVCRRSSRAYPEHVQGSGGTG*QWEA 40098302
Score = 112 bits (240), Expect = 7e-024
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +2 / +3
Query: 5 ASHFQPVLPEPWTC*GYAQELHRQTLGGKATVLPS*GIYPVVHTVCAQCRLRHSHPSPLH 184
ASH PV PEPWTC GYA+EL RQTLGGKAT G P+ T CAQC +HSH PL
Sbjct: 40098303 ASHC*PVPPEPWTCSGYARELRRQTLGGKATGPLYGGTCPLDRTECAQCTHQHSHRFPLR 40098482
Query: 185 RWNRSITXXXXXXXXXXRQEMTLDE*RGPPC 277
+WNR +T QEMTLDE* P C
Sbjct: 40098483 QWNRRLTFQ*APHSSSPLQEMTLDE*TDPLC 40098575
>dbj|AK121341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120M11, full
insert sequence
Length = 3825
Score = 204 bits (439), Expect = 6e-051
Identities = 82/90 (91%), Positives = 85/90 (94%)
Frame = -3 / +1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEAL 96
RVDL TRQVSSP+VDWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEAL
Sbjct: 949 RVDLLTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 1128
Query: 95 WPYLQEFVDGALAHILNMSKALGEQVGNGR 6
WPYLQEFVDGALAHILNMSKALGEQV NG+
Sbjct: 1129 WPYLQEFVDGALAHILNMSKALGEQVSNGK 1218
Score = 144 bits (308), Expect = 3e-033
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +3 / -1
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 1215 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 1036
Query: 189 GTGA*HLRRLTIAPVHVRR*HLTSEEVH 272
GTG *H RL IAPVH RR*HLTS+++H
Sbjct: 1035 GTGG*HFSRLPIAPVHFRR*HLTSKQIH 952
Score = 127 bits (273), Expect = 2e-028
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / +2
Query: 277 TGWTSSLVKCHLLTWTGAMVSRRRCYAPVPTMERGWVRVPEPTLCAYRVDHGINTSRRKH 98
T W LVKCHLL WTGAM S +C PVP ER VRV TLCA+R G +TS ++
Sbjct: 947 TEWICLLVKCHLLKWTGAMGSLLKC*PPVPLTEREAVRVLVRTLCAFRAVQGTSTSVKRP 1126
Query: 97 CGLTSKSLSMELLRISLTCPRLWENRLEMG 8
CGLTSKSLS EL RIS TCPRLW NRL MG
Sbjct: 1127 CGLTSKSLSTELSRIS*TCPRLWGNRLAMG 1216
Score = 116 bits (248), Expect = 5e-025
Identities = 56/91 (61%), Positives = 63/91 (69%)
Frame = -2 / +3
Query: 276 QGGPLHSSSVIS*RGLELW*ADGDVMLRFQRWRGDG*ECRSLHCAHTVWTTG*IPQEGST 97
Q G +SSSVIS* GLELW A +V LRF RG *EC +HCAH+V + G +P
Sbjct: 948 QSGSAYSSSVIS*SGLELWGAY*NVNLRFH*RRGKR*ECWCVHCAHSVRSKGQVPP*RGP 1127
Query: 96 VALPPRVCRWSSCAYP*HVQGSGRTGWKWEA 4
VALPPRVCR SS AYP HVQGSG TG +WEA
Sbjct: 1128 VALPPRVCRRSSRAYPEHVQGSGGTG*QWEA 1220
Score = 112 bits (240), Expect = 7e-024
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +2 / -3
Query: 5 ASHFQPVLPEPWTC*GYAQELHRQTLGGKATVLPS*GIYPVVHTVCAQCRLRHSHPSPLH 184
ASH PV PEPWTC GYA+EL RQTLGGKAT G P+ T CAQC +HSH PL
Sbjct: 1219 ASHC*PVPPEPWTCSGYARELRRQTLGGKATGPLYGGTCPLDRTECAQCTHQHSHRFPLR 1040
Query: 185 RWNRSITXXXXXXXXXXRQEMTLDE*RGPPC 277
+WNR +T QEMTLDE* P C
Sbjct: 1039 QWNRRLTFQ*APHSSSPLQEMTLDE*ADPLC 947
Score = 101 bits (216), Expect(2) = 2e-030
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = +1 / -2
Query: 1 TGLPFPTCSPRALDMLRICARAPSTNSWR*GHSASFLRYLSRGPHGMRTM 150
T P TCSPRALDM RICARAPSTNSWR*GH AS RYLS GPHGMRTM
Sbjct: 1223 TSFPLLTCSPRALDMFRICARAPSTNSWR*GHRASLRRYLSLGPHGMRTM 1074
Score = 52.8 bits (109), Expect(2) = 2e-030
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1 / -2
Query: 202 NISVGSP*LQSTSGDDT*RVKRSTL 276
NISVGSP*LQSTSGDDT*RV RSTL
Sbjct: 1022 NISVGSP*LQSTSGDDT*RVSRSTL 948
>dbj|AG023731.1| Oryza sativa (japonica cultivar-group) DNA, clone:ND2003_0_102_1A,
3' flanking sequence of Tos17 insertion in rice strain
ND2003, genomic survey sequence
Length = 481
Score = 177 bits (380), Expect = 7e-043
Identities = 70/76 (92%), Positives = 72/76 (94%)
Frame = -3 / +1
Query: 233 DWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAH 54
DWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEALWPYLQEFVDGALAH
Sbjct: 1 DWSYGEPTEMLTSGSTDGEGXGESAGAYIVRIPCGPRDKYLRKEALWPYLQEFVDGALAH 180
Query: 53 ILNMSKALGEQVGNGR 6
ILNMSKALGEQV NG+
Sbjct: 181 ILNMSKALGEQVSNGK 228
Score = 120 bits (256), Expect = 4e-026
Identities = 50/75 (66%), Positives = 58/75 (77%)
Frame = +3 / -2
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 225 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTXSLSVS 46
Query: 189 GTGA*HLRRLTIAPV 233
GTG *H RL IAPV
Sbjct: 45 GTGG*HFSRLPIAPV 1
Score = 101 bits (216), Expect(2) = 2e-022
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = +1 / -3
Query: 1 TGLPFPTCSPRALDMLRICARAPSTNSWR*GHSASFLRYLSRGPHGMRTM 150
T P TCSPRALDM RICARAPSTNSWR*GH AS RYLS GPHGMRTM
Sbjct: 233 TSFPLLTCSPRALDMFRICARAPSTNSWR*GHRASLRRYLSLGPHGMRTM 84
Score = 23.5 bits (45), Expect(2) = 2e-022
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / -3
Query: 202 NISVGSP*LQ 231
NISVGSP*LQ
Sbjct: 32 NISVGSP*LQ 3
>dbj|AG205918.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE7015_0_103_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE7015, genomic survey sequence
Length = 627
Score = 177 bits (380), Expect = 7e-043
Identities = 70/76 (92%), Positives = 72/76 (94%)
Frame = -3 / +1
Query: 233 DWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAH 54
DWSYGEPTEML SGS DGEG GESAGAYIVRIPCGPRDKYL+KEALWPYLQEFVDGALAH
Sbjct: 1 DWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEALWPYLQEFVDGALAH 180
Query: 53 ILNMSKALGEQVGNGR 6
ILNMSKALGEQV NG+
Sbjct: 181 ILNMSKALGEQVSNGK 228
Score = 119 bits (255), Expect = 6e-026
Identities = 50/75 (66%), Positives = 58/75 (77%)
Frame = +3 / -1
Query: 9 PISNLFSQSLGHVKDMRKSSIDKLLEVRPQCFLLEVFIPWSTRYAHNVGSGTLTHPLSIV 188
PI+NLF QSLGHV+DMR+SS+DKLLEVRPQ EV +PW+ R AHNV + TLT LS+
Sbjct: 225 PIANLFPQSLGHVQDMRESSVDKLLEVRPQGLFTEVLVPWTARNAHNVRTSTLTASLSVS 46
Query: 189 GTGA*HLRRLTIAPV 233
GTG *H RL IAPV
Sbjct: 45 GTGG*HFSRLPIAPV 1
Score = 101 bits (216), Expect(2) = 3e-022
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = +1 / -2
Query: 1 TGLPFPTCSPRALDMLRICARAPSTNSWR*GHSASFLRYLSRGPHGMRTM 150
T P TCSPRALDM RICARAPSTNSWR*GH AS RYLS GPHGMRTM
Sbjct: 233 TSFPLLTCSPRALDMFRICARAPSTNSWR*GHRASLRRYLSLGPHGMRTM 84
Score = 23.5 bits (45), Expect(2) = 3e-022
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / -2
Query: 202 NISVGSP*LQ 231
NISVGSP*LQ
Sbjct: 32 NISVGSP*LQ 3
>dbj|BA000044.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
centromeric region
Length = 1992366
Score = 115 bits (246), Expect(2) = 9e-037
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
+ N G MGES+GAYIVRIP GPRDKY+ KE LWP++QEFVDGAL HI+ MSK LGEQV
Sbjct: 460903 NSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHIMQMSKVLGEQV 461082
Query: 17 GNGR 6
G+G+
Sbjct: 461083 GSGQ 461094
Score = 61.1 bits (127), Expect(2) = 9e-037
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -3 / +1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEG 174
RVDL TRQ+S+PDVDWSYGEPTEML +++ G
Sbjct: 460819 RVDLLTRQISAPDVDWSYGEPTEMLSPRNSENFG 460920
>dbj|AP004041.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1115_A07
Length = 165126
Score = 115 bits (246), Expect(2) = 9e-037
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3 / +3
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
+ N G MGES+GAYIVRIP GPRDKY+ KE LWP++QEFVDGAL HI+ MSK LGEQV
Sbjct: 13437 NSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHIMQMSKVLGEQV 13616
Query: 17 GNGR 6
G+G+
Sbjct: 13617 GSGQ 13628
Score = 61.1 bits (127), Expect(2) = 9e-037
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -3 / +3
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEG 174
RVDL TRQ+S+PDVDWSYGEPTEML +++ G
Sbjct: 13353 RVDLLTRQISAPDVDWSYGEPTEMLSPRNSENFG 13454
>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16,
complete sequence
Length = 164501
Score = 115 bits (246), Expect(2) = 9e-037
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3 / +3
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
+ N G MGES+GAYIVRIP GPRDKY+ KE LWP++QEFVDGAL HI+ MSK LGEQV
Sbjct: 78723 NSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHIMQMSKVLGEQV 78902
Query: 17 GNGR 6
G+G+
Sbjct: 78903 GSGQ 78914
Score = 61.1 bits (127), Expect(2) = 9e-037
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -3 / +3
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEG 174
RVDL TRQ+S+PDVDWSYGEPTEML +++ G
Sbjct: 78639 RVDLLTRQISAPDVDWSYGEPTEMLSPRNSENFG 78740
>gb|AACV01017983.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017983, whole
genome shotgun sequence
Length = 17582
Score = 115 bits (246), Expect(2) = 9e-037
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
+ N G MGES+GAYIVRIP GPRDKY+ KE LWP++QEFVDGAL HI+ MSK LGEQV
Sbjct: 3934 NSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHIMQMSKVLGEQV 4113
Query: 17 GNGR 6
G+G+
Sbjct: 4114 GSGQ 4125
Score = 61.1 bits (127), Expect(2) = 9e-037
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -3 / +1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEG 174
RVDL TRQ+S+PDVDWSYGEPTEML +++ G
Sbjct: 3850 RVDLLTRQISAPDVDWSYGEPTEMLSPRNSENFG 3951
>dbj|AK101676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F14, full
insert sequence
Length = 3858
Score = 115 bits (246), Expect(2) = 9e-037
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
+ N G MGES+GAYIVRIP GPRDKY+ KE LWP++QEFVDGAL HI+ MSK LGEQV
Sbjct: 973 NSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHIMQMSKVLGEQV 1152
Query: 17 GNGR 6
G+G+
Sbjct: 1153 GSGQ 1164
Score = 61.1 bits (127), Expect(2) = 9e-037
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -3 / +1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEG 174
RVDL TRQ+S+PDVDWSYGEPTEML +++ G
Sbjct: 889 RVDLLTRQISAPDVDWSYGEPTEMLSPRNSENFG 990
>ref|XM_481429.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3201
Score = 115 bits (246), Expect(2) = 9e-037
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
+ N G MGES+GAYIVRIP GPRDKY+ KE LWP++QEFVDGAL HI+ MSK LGEQV
Sbjct: 778 NSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHIMQMSKVLGEQV 957
Query: 17 GNGR 6
G+G+
Sbjct: 958 GSGQ 969
Score = 61.1 bits (127), Expect(2) = 9e-037
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -3 / +1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEG 174
RVDL TRQ+S+PDVDWSYGEPTEML +++ G
Sbjct: 694 RVDLLTRQISAPDVDWSYGEPTEMLSPRNSENFG 795
>ref|NT_107144.1| Oryza sativa (japonica cultivar-group)
Length = 965832
Score = 100 bits (213), Expect(2) = 6e-031
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / -2
Query: 176 GMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGRP 3
G G S GAYIVR+PCGPRDKYL KE+LWP++ EFVD ALAH+ N+++ALGEQ+ P
Sbjct: 965039 GGGSSGGAYIVRLPCGPRDKYLPKESLWPHIPEFVDRALAHVTNVARALGEQLSPPPP 964866
Score = 56.5 bits (117), Expect(2) = 6e-031
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -3 / -2
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGA 153
RVDL TRQ+S PDVDW+YGEP EML + D + G+
Sbjct: 965150 RVDLLTRQISCPDVDWTYGEPVEMLTVPAADADDEDGGGGS 965028
>gb|CH401260.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000097
genomic scaffold, whole genome shotgun sequence
Length = 385661
Score = 100 bits (213), Expect(2) = 6e-031
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / -2
Query: 176 GMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGRP 3
G G S GAYIVR+PCGPRDKYL KE+LWP++ EFVD ALAH+ N+++ALGEQ+ P
Sbjct: 363331 GGGSSGGAYIVRLPCGPRDKYLPKESLWPHIPEFVDRALAHVTNVARALGEQLSPPPP 363158
Score = 56.5 bits (117), Expect(2) = 6e-031
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -3 / -2
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGA 153
RVDL TRQ+S PDVDW+YGEP EML + D + G+
Sbjct: 363442 RVDLLTRQISCPDVDWTYGEPVEMLTVPAADADDEDGGGGS 363320
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0026P08 map near C827S, complete sequence
Length = 148676
Score = 100 bits (213), Expect(2) = 6e-031
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / -1
Query: 176 GMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGRP 3
G G S GAYIVR+PCGPRDKYL KE+LWP++ EFVD ALAH+ N+++ALGEQ+ P
Sbjct: 94904 GGGSSGGAYIVRLPCGPRDKYLPKESLWPHIPEFVDRALAHVTNVARALGEQLSPPPP 94731
Score = 56.5 bits (117), Expect(2) = 6e-031
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -3 / -1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGA 153
RVDL TRQ+S PDVDW+YGEP EML + D + G+
Sbjct: 95015 RVDLLTRQISCPDVDWTYGEPVEMLTVPAADADDEDGGGGS 94893
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0097K08 map C827S, complete sequence
Length = 137870
Score = 100 bits (213), Expect(2) = 6e-031
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / +2
Query: 176 GMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGRP 3
G G S GAYIVR+PCGPRDKYL KE+LWP++ EFVD ALAH+ N+++ALGEQ+ P
Sbjct: 794 GGGSSGGAYIVRLPCGPRDKYLPKESLWPHIPEFVDRALAHVTNVARALGEQLSPPPP 967
Score = 56.5 bits (117), Expect(2) = 6e-031
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -3 / +2
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGA 153
RVDL TRQ+S PDVDW+YGEP EML + D + G+
Sbjct: 683 RVDLLTRQISCPDVDWTYGEPVEMLTVPAADADDEDGGGGS 805
>gb|AACV01022676.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022676, whole
genome shotgun sequence
Length = 15257
Score = 100 bits (213), Expect(2) = 6e-031
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / -3
Query: 176 GMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGRP 3
G G S GAYIVR+PCGPRDKYL KE+LWP++ EFVD ALAH+ N+++ALGEQ+ P
Sbjct: 13611 GGGSSGGAYIVRLPCGPRDKYLPKESLWPHIPEFVDRALAHVTNVARALGEQLSPPPP 13438
Score = 56.5 bits (117), Expect(2) = 6e-031
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -3 / -3
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGSNDGEGMGESAGA 153
RVDL TRQ+S PDVDW+YGEP EML + D + G+
Sbjct: 13722 RVDLLTRQISCPDVDWTYGEPVEMLTVPAADADDEDGGGGS 13600
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 106 bits (227), Expect(2) = 2e-030
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL HI+ MSK +GE++
Sbjct: 4795210 SFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTIGEEI 4795389
Query: 17 GNGRP 3
G G P
Sbjct: 4795390 GCGHP 4795404
Score = 48.3 bits (99), Expect(2) = 2e-030
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / +1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDL TRQ+ +P+ D SYGEPTEML S S
Sbjct: 4795126 RVDLLTRQILAPNFDRSYGEPTEMLVSTS 4795212
>ref|NT_107177.1| Oryza sativa (japonica cultivar-group)
Length = 1341590
Score = 106 bits (227), Expect(2) = 2e-030
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -3 / +3
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL HI+ MSK +GE++
Sbjct: 84003 SFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTIGEEI 84182
Query: 17 GNGRP 3
G G P
Sbjct: 84183 GCGHP 84197
Score = 48.3 bits (99), Expect(2) = 2e-030
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / +3
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDL TRQ+ +P+ D SYGEPTEML S S
Sbjct: 83919 RVDLLTRQILAPNFDRSYGEPTEMLVSTS 84005
>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1572_F02
Length = 93626
Score = 106 bits (227), Expect(2) = 2e-030
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -3 / +3
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL HI+ MSK +GE++
Sbjct: 84003 SFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTIGEEI 84182
Query: 17 GNGRP 3
G G P
Sbjct: 84183 GCGHP 84197
Score = 48.3 bits (99), Expect(2) = 2e-030
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / +3
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDL TRQ+ +P+ D SYGEPTEML S S
Sbjct: 83919 RVDLLTRQILAPNFDRSYGEPTEMLVSTS 84005
>gb|AACV01003496.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003496, whole
genome shotgun sequence
Length = 32401
Score = 106 bits (227), Expect(2) = 2e-030
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -3 / -2
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL HI+ MSK +GE++
Sbjct: 5733 SFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTIGEEI 5554
Query: 17 GNGRP 3
G G P
Sbjct: 5553 GCGHP 5539
Score = 48.3 bits (99), Expect(2) = 2e-030
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / -2
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDL TRQ+ +P+ D SYGEPTEML S S
Sbjct: 5817 RVDLLTRQILAPNFDRSYGEPTEMLVSTS 5731
>ref|XM_506734.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1572_F02.13 mRNA
Length = 3490
Score = 106 bits (227), Expect(2) = 2e-030
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -3 / +2
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL HI+ MSK +GE++
Sbjct: 851 SFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTIGEEI 1030
Query: 17 GNGRP 3
G G P
Sbjct: 1031 GCGHP 1045
Score = 48.3 bits (99), Expect(2) = 2e-030
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / +2
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDL TRQ+ +P+ D SYGEPTEML S S
Sbjct: 767 RVDLLTRQILAPNFDRSYGEPTEMLVSTS 853
>dbj|AK121486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150H16, full
insert sequence
Length = 3489
Score = 106 bits (227), Expect(2) = 2e-030
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL HI+ MSK +GE++
Sbjct: 850 SFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTIGEEI 1029
Query: 17 GNGRP 3
G G P
Sbjct: 1030 GCGHP 1044
Score = 48.3 bits (99), Expect(2) = 2e-030
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / +1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDL TRQ+ +P+ D SYGEPTEML S S
Sbjct: 766 RVDLLTRQILAPNFDRSYGEPTEMLVSTS 852
>dbj|AK065273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L08, full
insert sequence
Length = 3326
Score = 106 bits (227), Expect(2) = 2e-030
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -3 / +3
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL HI+ MSK +GE++
Sbjct: 816 SFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTIGEEI 995
Query: 17 GNGRP 3
G G P
Sbjct: 996 GCGHP 1010
Score = 48.3 bits (99), Expect(2) = 2e-030
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / +3
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDL TRQ+ +P+ D SYGEPTEML S S
Sbjct: 732 RVDLLTRQILAPNFDRSYGEPTEMLVSTS 818
>ref|XM_506735.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1572_F02.13 mRNA
Length = 3327
Score = 106 bits (227), Expect(2) = 2e-030
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL HI+ MSK +GE++
Sbjct: 817 SFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTIGEEI 996
Query: 17 GNGRP 3
G G P
Sbjct: 997 GCGHP 1011
Score = 48.3 bits (99), Expect(2) = 2e-030
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / +1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDL TRQ+ +P+ D SYGEPTEML S S
Sbjct: 733 RVDLLTRQILAPNFDRSYGEPTEMLVSTS 819
>dbj|AK098898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B04, full
insert sequence
Length = 3259
Score = 106 bits (227), Expect(2) = 2e-030
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -3 / +3
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL HI+ MSK +GE++
Sbjct: 789 SFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTIGEEI 968
Query: 17 GNGRP 3
G G P
Sbjct: 969 GCGHP 983
Score = 48.3 bits (99), Expect(2) = 2e-030
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / +3
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDL TRQ+ +P+ D SYGEPTEML S S
Sbjct: 705 RVDLLTRQILAPNFDRSYGEPTEMLVSTS 791
>ref|XM_464358.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3259
Score = 106 bits (227), Expect(2) = 2e-030
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -3 / +3
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL HI+ MSK +GE++
Sbjct: 789 SFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTIGEEI 968
Query: 17 GNGRP 3
G G P
Sbjct: 969 GCGHP 983
Score = 48.3 bits (99), Expect(2) = 2e-030
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / +3
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDL TRQ+ +P+ D SYGEPTEML S S
Sbjct: 705 RVDLLTRQILAPNFDRSYGEPTEMLVSTS 791
>gb|CB649251.1|CB649251 OSJNEb13B09.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13B09 5', mRNA sequence
Length = 796
Score = 103 bits (220), Expect(2) = 4e-029
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL+HI+ MS+A+GE++
Sbjct: 454 SFKNFKQERGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALSHIVKMSRAIGEEI 633
Query: 17 GNGRP 3
G P
Sbjct: 634 SCGHP 648
Score = 46.0 bits (94), Expect(2) = 4e-029
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3 / +1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDLFTRQ+ +P+ D SYGEP E L S S
Sbjct: 370 RVDLFTRQILAPNFDRSYGEPVEPLASTS 456
>gb|CB645118.1|CB645118 OSJNEb06K03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06K03 5', mRNA sequence
Length = 824
Score = 103 bits (220), Expect(2) = 4e-029
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL+HI+ MS+A+GE++
Sbjct: 391 SFKNFKQERGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALSHIVKMSRAIGEEI 570
Query: 17 GNGRP 3
G P
Sbjct: 571 SCGHP 585
Score = 46.0 bits (94), Expect(2) = 4e-029
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3 / +1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDLFTRQ+ +P+ D SYGEP E L S S
Sbjct: 307 RVDLFTRQILAPNFDRSYGEPVEPLASTS 393
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 103 bits (220), Expect(2) = 8e-029
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = -3 / -1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL+HI+ MS+A+GE++
Sbjct: 7204541 SFKNFKQERGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALSHIVKMSRAIGEEI 7204362
Query: 17 GNGRP 3
G P
Sbjct: 7204361 SCGHP 7204347
Score = 46.0 bits (94), Expect(2) = 8e-029
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3 / -1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDLFTRQ+ +P+ D SYGEP E L S S
Sbjct: 7204625 RVDLFTRQILAPNFDRSYGEPVEPLASTS 7204539
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 103 bits (220), Expect(2) = 8e-029
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = -3 / -1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL+HI+ MS+A+GE++
Sbjct: 3328265 SFKNFKQERGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALSHIVKMSRAIGEEI 3328086
Query: 17 GNGRP 3
G P
Sbjct: 3328085 SCGHP 3328071
Score = 46.0 bits (94), Expect(2) = 8e-029
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3 / -1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDLFTRQ+ +P+ D SYGEP E L S S
Sbjct: 3328349 RVDLFTRQILAPNFDRSYGEPVEPLASTS 3328263
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0416A11
Length = 171519
Score = 103 bits (220), Expect(2) = 9e-029
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = -3 / -1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL+HI+ MS+A+GE++
Sbjct: 144984 SFKNFKQERGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALSHIVKMSRAIGEEI 144805
Query: 17 GNGRP 3
G P
Sbjct: 144804 SCGHP 144790
Score = 46.0 bits (94), Expect(2) = 9e-029
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3 / -1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDLFTRQ+ +P+ D SYGEP E L S S
Sbjct: 145068 RVDLFTRQILAPNFDRSYGEPVEPLASTS 144982
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0017B12
Length = 157424
Score = 103 bits (220), Expect(2) = 9e-029
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = -3 / -2
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL+HI+ MS+A+GE++
Sbjct: 17878 SFKNFKQERGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALSHIVKMSRAIGEEI 17699
Query: 17 GNGRP 3
G P
Sbjct: 17698 SCGHP 17684
Score = 46.0 bits (94), Expect(2) = 9e-029
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3 / -2
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDLFTRQ+ +P+ D SYGEP E L S S
Sbjct: 17962 RVDLFTRQILAPNFDRSYGEPVEPLASTS 17876
>gb|AACV01014670.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014670, whole
genome shotgun sequence
Length = 47074
Score = 103 bits (220), Expect(2) = 9e-029
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = -3 / -1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL+HI+ MS+A+GE++
Sbjct: 13558 SFKNFKQERGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALSHIVKMSRAIGEEI 13379
Query: 17 GNGRP 3
G P
Sbjct: 13378 SCGHP 13364
Score = 46.0 bits (94), Expect(2) = 9e-029
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3 / -1
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDLFTRQ+ +P+ D SYGEP E L S S
Sbjct: 13642 RVDLFTRQILAPNFDRSYGEPVEPLASTS 13556
>gb|CB638899.1|CB638899 OSJNEa07N02.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa07N02 5', mRNA sequence
Length = 429
Score = 91.8 bits (194), Expect(2) = 7e-026
Identities = 35/56 (62%), Positives = 46/56 (82%)
Frame = -3 / +2
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKAL 30
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL+HI+ MS+A+
Sbjct: 257 SFKNFKQERGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALSHIVKMSRAI 424
Score = 46.0 bits (94), Expect(2) = 7e-026
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3 / +2
Query: 275 RVDLFTRQVSSPDVDWSYGEPTEMLCSGS 189
RVDLFTRQ+ +P+ D SYGEP E L S S
Sbjct: 173 RVDLFTRQILAPNFDRSYGEPVEPLASTS 259
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 115 bits (246), Expect = 2e-024
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3 / +2
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
+ N G MGES+GAYIVRIP GPRDKY+ KE LWP++QEFVDGAL HI+ MSK LGEQV
Sbjct: 12169724 NSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHIMQMSKVLGEQV 12169903
Query: 17 GNGR 6
G+G+
Sbjct: 12169904 GSGQ 12169915
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 115 bits (246), Expect = 2e-024
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
+ N G MGES+GAYIVRIP GPRDKY+ KE LWP++QEFVDGAL HI+ MSK LGEQV
Sbjct: 4160053 NSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHIMQMSKVLGEQV 4160232
Query: 17 GNGR 6
G+G+
Sbjct: 4160233 GSGQ 4160244
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 115 bits (246), Expect = 2e-024
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
+ N G MGES+GAYIVRIP GPRDKY+ KE LWP++QEFVDGAL HI+ MSK LGEQV
Sbjct: 11762059 NSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHIMQMSKVLGEQV 11762238
Query: 17 GNGR 6
G+G+
Sbjct: 11762239 GSGQ 11762250
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 115 bits (246), Expect = 2e-024
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
+ N G MGES+GAYIVRIP GPRDKY+ KE LWP++QEFVDGAL HI+ MSK LGEQV
Sbjct: 12409408 NSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEFVDGALVHIMQMSKVLGEQV 12409587
Query: 17 GNGR 6
G+G+
Sbjct: 12409588 GSGQ 12409599
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 106 bits (227), Expect = 7e-022
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -3 / +1
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL HI+ MSK +GE++
Sbjct: 4795210 SFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTIGEEI 4795389
Query: 17 GNGRP 3
G G P
Sbjct: 4795390 GCGHP 4795404
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 106 bits (227), Expect = 7e-022
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -3 / +2
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL HI+ MSK +GE++
Sbjct: 4711931 SFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTIGEEI 4712110
Query: 17 GNGRP 3
G G P
Sbjct: 4712111 GCGHP 4712125
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 103 bits (220), Expect = 6e-021
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = -3 / -3
Query: 197 SGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQV 18
S N + GE++GAYI+RIP GP+DKYL KE LWP++QEFVDGAL+HI+ MS+A+GE++
Sbjct: 24903278 SFKNFKQERGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALSHIVKMSRAIGEEI 24903099
Query: 17 GNGRP 3
G P
Sbjct: 24903098 SCGHP 24903084
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,201,119,507
Number of Sequences: 438736
Number of extensions: 34010529
Number of successful extensions: 366275
Number of sequences better than 1.0e-020: 77
length of database: 933,473,305
effective HSP length: 55
effective length of database: 909,342,825
effective search space used: 32736341700
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)