TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.063O07F020916.3.1
(657 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AP005414.3| Oryza sativa (japonica cultivar-group) geno... 217 1e-056
dbj|AP003988.3| Oryza sativa (japonica cultivar-group) geno... 217 1e-056
gb|AACV01003951.1| Oryza sativa (japonica cultivar-group) c... 217 1e-056
ref|XM_465062.1| Oryza sativa (japonica cultivar-group), mRNA 217 1e-056
gb|CF307403.1|CF307403 HDA1--06-J17.g1 OsHDAC1-overexpressi... 217 1e-056
dbj|AK101077.1| Oryza sativa (japonica cultivar-group) cDNA... 215 7e-056
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 217 1e-054
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 217 1e-054
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 217 1e-054
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 217 1e-054
gb|AQ158243.1|AQ158243 nbxb0010J20r CUGI Rice BAC Library O... 148 5e-034
>dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0073G17
Length = 162391
Score = 217 bits (468), Expect(2) = 1e-056
Identities = 92/117 (78%), Positives = 98/117 (83%)
Frame = -1 / -3
Query: 642 FHPITCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSF 463
F TC LK FT+G C++IPDSSSRTAPLFS PRLYR VIILTNSS LITPLEPTITSF
Sbjct: 2819 FPSSTCLLKRFTVGECRVIPDSSSRTAPLFS*PRLYRAFVIILTNSSLLITPLEPTITSF 2640
Query: 462 PWEGKGLAIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQPIY 292
PWEGKGLAIVLPKG F+ EK S KLA STED LARFEGGSSSS+PPMKC +QPIY
Sbjct: 2639 PWEGKGLAIVLPKGAAGFKQEKLSNKLAGSTEDALARFEGGSSSSKPPMKC*NQPIY 2469
Score = 210 bits (452), Expect(2) = 2e-053
Identities = 94/117 (80%), Positives = 100/117 (85%)
Frame = +2 / +1
Query: 284 SEKYMG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQG 463
S+ YMG* HFMGG EDDEPPSKRAR SSVE ASL D FS K + PLGSTMARPLPSQG
Sbjct: 2461 SKIYMG*F*HFMGGFEDDEPPSKRARASSVEPASLLDSFSCLKPAAPLGSTMARPLPSQG 2640
Query: 464 KEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
KEVMVGSKGVIK++EFVRIITK LYSLGYEKSGAVLEEESGI LH+P V LFR QV+
Sbjct: 2641 KEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHSPTVNLFRRQVL 2811
Score = 153 bits (328), Expect = 2e-035
Identities = 66/118 (55%), Positives = 80/118 (67%)
Frame = -3 / -2
Query: 640 PSNHLFSEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFP 461
P +L SEK H M + *F L+NCS FFI+K IQS DYP+K FP
Sbjct: 2817 PIKYLPSEKIHCWGMQSYS*FFLKNCSAFFITKAIQSLCDYPHKFIPLNNTFRANHNFFP 2638
Query: 460 LGRQRSSHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAHIFF 287
LGRQRSSHC SQR G+F+ R+T+ TC FY*GCSCAF GW ++F+TSHEM +SAHI+F
Sbjct: 2637 LGRQRSSHCASQRSGRFQARKTI*QTCWFY*GCSCAFRGWFIVFKTSHEMLKSAHIYF 2464
Score = 143 bits (306), Expect = 2e-032
Identities = 76/120 (63%), Positives = 83/120 (69%)
Frame = -2 / -1
Query: 647 PISIQSPVL*KVSP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*L 468
P S Q P *K S G + LI P ELL FFH Q YTE *LS QI PS**H +QP*L
Sbjct: 2824 PNSHQVPAF*KDSLLGNAELFLILPQELLRFFHNQGYTEPL*LSSQIHPS**HL*SQP*L 2645
Query: 467 LSLGKAKV*PLYFPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISPYIF 288
LS GKAKV*PL FPK+ ++S +N L NL +LLRM LRV RV LQNLP*N KISPYIF
Sbjct: 2644 LSPGKAKV*PLCFPKERQVSSKKNYLTNLLVLLRMLLRVSRVVHRLQNLP*NVKISPYIF 2465
Score = 129 bits (277), Expect(3) = 5e-037
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = +1 / +3
Query: 292 IYGLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRERS 471
IYGLIL FHGRF*R TL+TRK+ILSR KF R F + E +SFGK+NG*TFAFP ERS
Sbjct: 2469 IYGLILTFHGRF*RR*TTLETRKSILSRTSKFVR*FFLLETCRSFGKHNG*TFAFPGERS 2648
Query: 472 YGWFQGCY*EGGIC*DNHQNSV 537
YGW CY*EG IC DNH+ SV
Sbjct: 2649 YGWL*RCY*EG*ICEDNHKGSV 2714
Score = 105 bits (224), Expect = 5e-021
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +3 / +2
Query: 288 KNIWADLGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFPILWEVQWLDLCLPKGK 467
K IWAD ISWEVLK +HP+NAQEHPQ*N QV V N P+LWE QWLDLCLP+GK
Sbjct: 2465 KYIWADFNISWEVLKTMNHPRNAQEHPQ*NQQVC*IVFLA*NLPLLWEAQWLDLCLPRGK 2644
Query: 468 K 470
K
Sbjct: 2645 K 2647
Score = 43.7 bits (89), Expect(3) = 5e-037
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +3 / +2
Query: 516 G*SPKLCIVLDMKKVEQFWRRNQGLFYITLW*NFSENR*LDG 641
G*S +LCI L MKK EQF R+NQ I * FSE R L G
Sbjct: 2693 G*SQRLCIALVMKKAEQFLRKNQE*LCIPQQ*IFSEGRYLMG 2818
Score = 26.7 bits (52), Expect(2) = 1e-056
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 304 SAHIFFTSGKVMVCNLHTNCC 242
S +IF TS ++M+C+ N C
Sbjct: 2479 SPYIFLTSREMMLCSSERNAC 2417
Score = 23.5 bits (45), Expect(2) = 2e-053
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 242 ATVCVEIAYHHLP*SEKYM 298
A++ + A HHLP S+KY+
Sbjct: 2417 ASIPLGAA*HHLPRSQKYI 2473
Score = 23.1 bits (44), Expect(3) = 5e-037
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1 / +1
Query: 214 NPLSVSVTVCNSLCGDCIPSPSLK*KIY 297
N LS+ T C CI S K KIY
Sbjct: 2389 NVLSLYTTHCKHSARSCITSSP*KSKIY 2472
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1057_D08
Length = 119557
Score = 217 bits (468), Expect(2) = 1e-056
Identities = 92/117 (78%), Positives = 98/117 (83%)
Frame = -1 / -3
Query: 642 FHPITCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSF 463
F TC LK FT+G C++IPDSSSRTAPLFS PRLYR VIILTNSS LITPLEPTITSF
Sbjct: 119183 FPSSTCLLKRFTVGECRVIPDSSSRTAPLFS*PRLYRAFVIILTNSSLLITPLEPTITSF 119004
Query: 462 PWEGKGLAIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQPIY 292
PWEGKGLAIVLPKG F+ EK S KLA STED LARFEGGSSSS+PPMKC +QPIY
Sbjct: 119003 PWEGKGLAIVLPKGAAGFKQEKLSNKLAGSTEDALARFEGGSSSSKPPMKC*NQPIY 118833
Score = 210 bits (452), Expect(2) = 2e-053
Identities = 94/117 (80%), Positives = 100/117 (85%)
Frame = +2 / +1
Query: 284 SEKYMG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQG 463
S+ YMG* HFMGG EDDEPPSKRAR SSVE ASL D FS K + PLGSTMARPLPSQG
Sbjct: 118825 SKIYMG*F*HFMGGFEDDEPPSKRARASSVEPASLLDSFSCLKPAAPLGSTMARPLPSQG 119004
Query: 464 KEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
KEVMVGSKGVIK++EFVRIITK LYSLGYEKSGAVLEEESGI LH+P V LFR QV+
Sbjct: 119005 KEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHSPTVNLFRRQVL 119175
Score = 153 bits (328), Expect = 2e-035
Identities = 66/118 (55%), Positives = 80/118 (67%)
Frame = -3 / -2
Query: 640 PSNHLFSEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFP 461
P +L SEK H M + *F L+NCS FFI+K IQS DYP+K FP
Sbjct: 119181 PIKYLPSEKIHCWGMQSYS*FFLKNCSAFFITKAIQSLCDYPHKFIPLNNTFRANHNFFP 119002
Query: 460 LGRQRSSHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAHIFF 287
LGRQRSSHC SQR G+F+ R+T+ TC FY*GCSCAF GW ++F+TSHEM +SAHI+F
Sbjct: 119001 LGRQRSSHCASQRSGRFQARKTI*QTCWFY*GCSCAFRGWFIVFKTSHEMLKSAHIYF 118828
Score = 143 bits (306), Expect = 2e-032
Identities = 76/120 (63%), Positives = 83/120 (69%)
Frame = -2 / -1
Query: 647 PISIQSPVL*KVSP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*L 468
P S Q P *K S G + LI P ELL FFH Q YTE *LS QI PS**H +QP*L
Sbjct: 119188 PNSHQVPAF*KDSLLGNAELFLILPQELLRFFHNQGYTEPL*LSSQIHPS**HL*SQP*L 119009
Query: 467 LSLGKAKV*PLYFPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISPYIF 288
LS GKAKV*PL FPK+ ++S +N L NL +LLRM LRV RV LQNLP*N KISPYIF
Sbjct: 119008 LSPGKAKV*PLCFPKERQVSSKKNYLTNLLVLLRMLLRVSRVVHRLQNLP*NVKISPYIF 118829
Score = 129 bits (277), Expect(3) = 5e-037
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = +1 / +3
Query: 292 IYGLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRERS 471
IYGLIL FHGRF*R TL+TRK+ILSR KF R F + E +SFGK+NG*TFAFP ERS
Sbjct: 118833 IYGLILTFHGRF*RR*TTLETRKSILSRTSKFVR*FFLLETCRSFGKHNG*TFAFPGERS 119012
Query: 472 YGWFQGCY*EGGIC*DNHQNSV 537
YGW CY*EG IC DNH+ SV
Sbjct: 119013 YGWL*RCY*EG*ICEDNHKGSV 119078
Score = 105 bits (224), Expect(2) = 4e-021
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +3 / +2
Query: 288 KNIWADLGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFPILWEVQWLDLCLPKGK 467
K IWAD ISWEVLK +HP+NAQEHPQ*N QV V N P+LWE QWLDLCLP+GK
Sbjct: 118829 KYIWADFNISWEVLKTMNHPRNAQEHPQ*NQQVC*IVFLA*NLPLLWEAQWLDLCLPRGK 119008
Query: 468 K 470
K
Sbjct: 119009 K 119011
Score = 43.7 bits (89), Expect(3) = 5e-037
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +3 / +2
Query: 516 G*SPKLCIVLDMKKVEQFWRRNQGLFYITLW*NFSENR*LDG 641
G*S +LCI L MKK EQF R+NQ I * FSE R L G
Sbjct: 119057 G*SQRLCIALVMKKAEQFLRKNQE*LCIPQQ*IFSEGRYLMG 119182
Score = 29.0 bits (57), Expect(2) = 4e-021
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1 / +2
Query: 22 VGSPLPQAKHHHPSLPPYASSPPRALSPPNPTAGA 126
VG+ P+ + HP+ PP S P PP P A
Sbjct: 89324 VGNRRPRLEPPHPAPPPPPSFPSDPSPPPPPPPAA 89428
Score = 26.7 bits (52), Expect(2) = 1e-056
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 304 SAHIFFTSGKVMVCNLHTNCC 242
S +IF TS ++M+C+ N C
Sbjct: 118843 SPYIFLTSREMMLCSSERNAC 118781
Score = 23.5 bits (45), Expect(2) = 2e-053
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 242 ATVCVEIAYHHLP*SEKYM 298
A++ + A HHLP S+KY+
Sbjct: 118781 ASIPLGAA*HHLPRSQKYI 118837
Score = 23.1 bits (44), Expect(3) = 5e-037
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1 / +1
Query: 214 NPLSVSVTVCNSLCGDCIPSPSLK*KIY 297
N LS+ T C CI S K KIY
Sbjct: 118753 NVLSLYTTHCKHSARSCITSSP*KSKIY 118836
>gb|AACV01003951.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003951, whole
genome shotgun sequence
Length = 72122
Score = 217 bits (468), Expect(2) = 1e-056
Identities = 92/117 (78%), Positives = 98/117 (83%)
Frame = -1 / -1
Query: 642 FHPITCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSF 463
F TC LK FT+G C++IPDSSSRTAPLFS PRLYR VIILTNSS LITPLEPTITSF
Sbjct: 1082 FPSSTCLLKRFTVGECRVIPDSSSRTAPLFS*PRLYRAFVIILTNSSLLITPLEPTITSF 903
Query: 462 PWEGKGLAIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQPIY 292
PWEGKGLAIVLPKG F+ EK S KLA STED LARFEGGSSSS+PPMKC +QPIY
Sbjct: 902 PWEGKGLAIVLPKGAAGFKQEKLSNKLAGSTEDALARFEGGSSSSKPPMKC*NQPIY 732
Score = 210 bits (452), Expect(2) = 2e-053
Identities = 94/117 (80%), Positives = 100/117 (85%)
Frame = +2 / +1
Query: 284 SEKYMG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQG 463
S+ YMG* HFMGG EDDEPPSKRAR SSVE ASL D FS K + PLGSTMARPLPSQG
Sbjct: 724 SKIYMG*F*HFMGGFEDDEPPSKRARASSVEPASLLDSFSCLKPAAPLGSTMARPLPSQG 903
Query: 464 KEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
KEVMVGSKGVIK++EFVRIITK LYSLGYEKSGAVLEEESGI LH+P V LFR QV+
Sbjct: 904 KEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHSPTVNLFRRQVL 1074
Score = 153 bits (328), Expect = 2e-035
Identities = 66/118 (55%), Positives = 80/118 (67%)
Frame = -3 / -3
Query: 640 PSNHLFSEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFP 461
P +L SEK H M + *F L+NCS FFI+K IQS DYP+K FP
Sbjct: 1080 PIKYLPSEKIHCWGMQSYS*FFLKNCSAFFITKAIQSLCDYPHKFIPLNNTFRANHNFFP 901
Query: 460 LGRQRSSHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAHIFF 287
LGRQRSSHC SQR G+F+ R+T+ TC FY*GCSCAF GW ++F+TSHEM +SAHI+F
Sbjct: 900 LGRQRSSHCASQRSGRFQARKTI*QTCWFY*GCSCAFRGWFIVFKTSHEMLKSAHIYF 727
Score = 143 bits (306), Expect = 2e-032
Identities = 76/120 (63%), Positives = 83/120 (69%)
Frame = -2 / -2
Query: 647 PISIQSPVL*KVSP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*L 468
P S Q P *K S G + LI P ELL FFH Q YTE *LS QI PS**H +QP*L
Sbjct: 1087 PNSHQVPAF*KDSLLGNAELFLILPQELLRFFHNQGYTEPL*LSSQIHPS**HL*SQP*L 908
Query: 467 LSLGKAKV*PLYFPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISPYIF 288
LS GKAKV*PL FPK+ ++S +N L NL +LLRM LRV RV LQNLP*N KISPYIF
Sbjct: 907 LSPGKAKV*PLCFPKERQVSSKKNYLTNLLVLLRMLLRVSRVVHRLQNLP*NVKISPYIF 728
Score = 129 bits (277), Expect(3) = 5e-037
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = +1 / +3
Query: 292 IYGLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRERS 471
IYGLIL FHGRF*R TL+TRK+ILSR KF R F + E +SFGK+NG*TFAFP ERS
Sbjct: 732 IYGLILTFHGRF*RR*TTLETRKSILSRTSKFVR*FFLLETCRSFGKHNG*TFAFPGERS 911
Query: 472 YGWFQGCY*EGGIC*DNHQNSV 537
YGW CY*EG IC DNH+ SV
Sbjct: 912 YGWL*RCY*EG*ICEDNHKGSV 977
Score = 105 bits (224), Expect = 5e-021
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +3 / +2
Query: 288 KNIWADLGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFPILWEVQWLDLCLPKGK 467
K IWAD ISWEVLK +HP+NAQEHPQ*N QV V N P+LWE QWLDLCLP+GK
Sbjct: 728 KYIWADFNISWEVLKTMNHPRNAQEHPQ*NQQVC*IVFLA*NLPLLWEAQWLDLCLPRGK 907
Query: 468 K 470
K
Sbjct: 908 K 910
Score = 43.7 bits (89), Expect(3) = 5e-037
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +3 / +2
Query: 516 G*SPKLCIVLDMKKVEQFWRRNQGLFYITLW*NFSENR*LDG 641
G*S +LCI L MKK EQF R+NQ I * FSE R L G
Sbjct: 956 G*SQRLCIALVMKKAEQFLRKNQE*LCIPQQ*IFSEGRYLMG 1081
Score = 26.7 bits (52), Expect(2) = 1e-056
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 304 SAHIFFTSGKVMVCNLHTNCC 242
S +IF TS ++M+C+ N C
Sbjct: 742 SPYIFLTSREMMLCSSERNAC 680
Score = 23.5 bits (45), Expect(2) = 2e-053
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 242 ATVCVEIAYHHLP*SEKYM 298
A++ + A HHLP S+KY+
Sbjct: 680 ASIPLGAA*HHLPRSQKYI 736
Score = 23.1 bits (44), Expect(3) = 5e-037
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1 / +1
Query: 214 NPLSVSVTVCNSLCGDCIPSPSLK*KIY 297
N LS+ T C CI S K KIY
Sbjct: 652 NVLSLYTTHCKHSARSCITSSP*KSKIY 735
>ref|XM_465062.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2904
Score = 217 bits (468), Expect(2) = 1e-056
Identities = 92/117 (78%), Positives = 98/117 (83%)
Frame = -1 / -1
Query: 642 FHPITCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSF 463
F TC LK FT+G C++IPDSSSRTAPLFS PRLYR VIILTNSS LITPLEPTITSF
Sbjct: 420 FPSSTCLLKRFTVGECRVIPDSSSRTAPLFS*PRLYRAFVIILTNSSLLITPLEPTITSF 241
Query: 462 PWEGKGLAIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQPIY 292
PWEGKGLAIVLPKG F+ EK S KLA STED LARFEGGSSSS+PPMKC +QPIY
Sbjct: 240 PWEGKGLAIVLPKGAAGFKQEKLSNKLAGSTEDALARFEGGSSSSKPPMKC*NQPIY 70
Score = 210 bits (452), Expect(2) = 2e-053
Identities = 94/117 (80%), Positives = 100/117 (85%)
Frame = +2 / +2
Query: 284 SEKYMG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQG 463
S+ YMG* HFMGG EDDEPPSKRAR SSVE ASL D FS K + PLGSTMARPLPSQG
Sbjct: 62 SKIYMG*F*HFMGGFEDDEPPSKRARASSVEPASLLDSFSCLKPAAPLGSTMARPLPSQG 241
Query: 464 KEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
KEVMVGSKGVIK++EFVRIITK LYSLGYEKSGAVLEEESGI LH+P V LFR QV+
Sbjct: 242 KEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHSPTVNLFRRQVL 412
Score = 153 bits (328), Expect = 2e-035
Identities = 66/118 (55%), Positives = 80/118 (67%)
Frame = -3 / -3
Query: 640 PSNHLFSEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFP 461
P +L SEK H M + *F L+NCS FFI+K IQS DYP+K FP
Sbjct: 418 PIKYLPSEKIHCWGMQSYS*FFLKNCSAFFITKAIQSLCDYPHKFIPLNNTFRANHNFFP 239
Query: 460 LGRQRSSHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAHIFF 287
LGRQRSSHC SQR G+F+ R+T+ TC FY*GCSCAF GW ++F+TSHEM +SAHI+F
Sbjct: 238 LGRQRSSHCASQRSGRFQARKTI*QTCWFY*GCSCAFRGWFIVFKTSHEMLKSAHIYF 65
Score = 143 bits (306), Expect = 2e-032
Identities = 76/120 (63%), Positives = 83/120 (69%)
Frame = -2 / -2
Query: 647 PISIQSPVL*KVSP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*L 468
P S Q P *K S G + LI P ELL FFH Q YTE *LS QI PS**H +QP*L
Sbjct: 425 PNSHQVPAF*KDSLLGNAELFLILPQELLRFFHNQGYTEPL*LSSQIHPS**HL*SQP*L 246
Query: 467 LSLGKAKV*PLYFPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISPYIF 288
LS GKAKV*PL FPK+ ++S +N L NL +LLRM LRV RV LQNLP*N KISPYIF
Sbjct: 245 LSPGKAKV*PLCFPKERQVSSKKNYLTNLLVLLRMLLRVSRVVHRLQNLP*NVKISPYIF 66
Score = 129 bits (277), Expect(2) = 2e-035
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = +1 / +1
Query: 292 IYGLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRERS 471
IYGLIL FHGRF*R TL+TRK+ILSR KF R F + E +SFGK+NG*TFAFP ERS
Sbjct: 70 IYGLILTFHGRF*RR*TTLETRKSILSRTSKFVR*FFLLETCRSFGKHNG*TFAFPGERS 249
Query: 472 YGWFQGCY*EGGIC*DNHQNSV 537
YGW CY*EG IC DNH+ SV
Sbjct: 250 YGWL*RCY*EG*ICEDNHKGSV 315
Score = 105 bits (224), Expect(2) = 4e-021
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +3 / +3
Query: 288 KNIWADLGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFPILWEVQWLDLCLPKGK 467
K IWAD ISWEVLK +HP+NAQEHPQ*N QV V N P+LWE QWLDLCLP+GK
Sbjct: 66 KYIWADFNISWEVLKTMNHPRNAQEHPQ*NQQVC*IVFLA*NLPLLWEAQWLDLCLPRGK 245
Query: 468 K 470
K
Sbjct: 246 K 248
Score = 43.7 bits (89), Expect(2) = 2e-035
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +3 / +3
Query: 516 G*SPKLCIVLDMKKVEQFWRRNQGLFYITLW*NFSENR*LDG 641
G*S +LCI L MKK EQF R+NQ I * FSE R L G
Sbjct: 294 G*SQRLCIALVMKKAEQFLRKNQE*LCIPQQ*IFSEGRYLMG 419
Score = 26.7 bits (52), Expect(2) = 1e-056
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 304 SAHIFFTSGKVMVCNLHTNCC 242
S +IF TS ++M+C+ N C
Sbjct: 80 SPYIFLTSREMMLCSSERNAC 18
Score = 23.5 bits (45), Expect(2) = 4e-021
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3 / +2
Query: 612 NFSENR*LDGNWDNA 656
N + LDGNWD+A
Sbjct: 389 NLFRRQVLDGNWDSA 433
Score = 23.5 bits (45), Expect(2) = 2e-053
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 242 ATVCVEIAYHHLP*SEKYM 298
A++ + A HHLP S+KY+
Sbjct: 18 ASIPLGAA*HHLPRSQKYI 74
>gb|CF307403.1|CF307403 HDA1--06-J17.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--06-J17, mRNA sequence
Length = 638
Score = 217 bits (468), Expect(2) = 1e-056
Identities = 92/117 (78%), Positives = 98/117 (83%)
Frame = -1 / -1
Query: 642 FHPITCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSF 463
F TC LK FT+G C++IPDSSSRTAPLFS PRLYR VIILTNSS LITPLEPTITSF
Sbjct: 629 FPSSTCLLKRFTVGECRVIPDSSSRTAPLFS*PRLYRAFVIILTNSSLLITPLEPTITSF 450
Query: 462 PWEGKGLAIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQPIY 292
PWEGKGLAIVLPKG F+ EK S KLA STED LARFEGGSSSS+PPMKC +QPIY
Sbjct: 449 PWEGKGLAIVLPKGAAGFKQEKLSNKLAGSTEDALARFEGGSSSSKPPMKC*NQPIY 279
Score = 210 bits (452), Expect(2) = 2e-053
Identities = 94/117 (80%), Positives = 100/117 (85%)
Frame = +2 / +1
Query: 284 SEKYMG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQG 463
S+ YMG* HFMGG EDDEPPSKRAR SSVE ASL D FS K + PLGSTMARPLPSQG
Sbjct: 271 SKIYMG*F*HFMGGFEDDEPPSKRARASSVEPASLLDSFSCLKPAAPLGSTMARPLPSQG 450
Query: 464 KEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
KEVMVGSKGVIK++EFVRIITK LYSLGYEKSGAVLEEESGI LH+P V LFR QV+
Sbjct: 451 KEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHSPTVNLFRRQVL 621
Score = 153 bits (328), Expect = 2e-035
Identities = 66/118 (55%), Positives = 80/118 (67%)
Frame = -3 / -3
Query: 640 PSNHLFSEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFP 461
P +L SEK H M + *F L+NCS FFI+K IQS DYP+K FP
Sbjct: 627 PIKYLPSEKIHCWGMQSYS*FFLKNCSAFFITKAIQSLCDYPHKFIPLNNTFRANHNFFP 448
Query: 460 LGRQRSSHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAHIFF 287
LGRQRSSHC SQR G+F+ R+T+ TC FY*GCSCAF GW ++F+TSHEM +SAHI+F
Sbjct: 447 LGRQRSSHCASQRSGRFQARKTI*QTCWFY*GCSCAFRGWFIVFKTSHEMLKSAHIYF 274
Score = 143 bits (306), Expect = 2e-032
Identities = 76/120 (63%), Positives = 83/120 (69%)
Frame = -2 / -2
Query: 647 PISIQSPVL*KVSP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*L 468
P S Q P *K S G + LI P ELL FFH Q YTE *LS QI PS**H +QP*L
Sbjct: 634 PNSHQVPAF*KDSLLGNAELFLILPQELLRFFHNQGYTEPL*LSSQIHPS**HL*SQP*L 455
Query: 467 LSLGKAKV*PLYFPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISPYIF 288
LS GKAKV*PL FPK+ ++S +N L NL +LLRM LRV RV LQNLP*N KISPYIF
Sbjct: 454 LSPGKAKV*PLCFPKERQVSSKKNYLTNLLVLLRMLLRVSRVVHRLQNLP*NVKISPYIF 275
Score = 129 bits (277), Expect(3) = 6e-037
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = +1 / +3
Query: 292 IYGLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRERS 471
IYGLIL FHGRF*R TL+TRK+ILSR KF R F + E +SFGK+NG*TFAFP ERS
Sbjct: 279 IYGLILTFHGRF*RR*TTLETRKSILSRTSKFVR*FFLLETCRSFGKHNG*TFAFPGERS 458
Query: 472 YGWFQGCY*EGGIC*DNHQNSV 537
YGW CY*EG IC DNH+ SV
Sbjct: 459 YGWL*RCY*EG*ICEDNHKGSV 524
Score = 105 bits (224), Expect = 5e-021
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +3 / +2
Query: 288 KNIWADLGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFPILWEVQWLDLCLPKGK 467
K IWAD ISWEVLK +HP+NAQEHPQ*N QV V N P+LWE QWLDLCLP+GK
Sbjct: 275 KYIWADFNISWEVLKTMNHPRNAQEHPQ*NQQVC*IVFLA*NLPLLWEAQWLDLCLPRGK 454
Query: 468 K 470
K
Sbjct: 455 K 457
Score = 43.7 bits (89), Expect(3) = 6e-037
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +3 / +2
Query: 516 G*SPKLCIVLDMKKVEQFWRRNQGLFYITLW*NFSENR*LDG 641
G*S +LCI L MKK EQF R+NQ I * FSE R L G
Sbjct: 503 G*SQRLCIALVMKKAEQFLRKNQE*LCIPQQ*IFSEGRYLMG 628
Score = 26.7 bits (52), Expect(2) = 1e-056
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 304 SAHIFFTSGKVMVCNLHTNCC 242
S +IF TS ++M+C+ N C
Sbjct: 289 SPYIFLTSREMMLCSSERNAC 227
Score = 23.5 bits (45), Expect(2) = 2e-053
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 242 ATVCVEIAYHHLP*SEKYM 298
A++ + A HHLP S+KY+
Sbjct: 227 ASIPLGAA*HHLPRSQKYI 283
Score = 23.1 bits (44), Expect(3) = 6e-037
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1 / +1
Query: 214 NPLSVSVTVCNSLCGDCIPSPSLK*KIY 297
N LS+ T C CI S K KIY
Sbjct: 199 NVLSLYTTHCKHSARSCITSSP*KSKIY 282
>dbj|AK101077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024C11, full
insert sequence
Length = 3204
Score = 215 bits (463), Expect(2) = 7e-056
Identities = 91/117 (77%), Positives = 97/117 (82%)
Frame = -1 / -1
Query: 642 FHPITCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSF 463
F TC LK FT+G C++IPDSSSRTAPLFS PRLYR VIILTNSS LITPLEPTITSF
Sbjct: 720 FPSSTCLLKRFTVGECRVIPDSSSRTAPLFS*PRLYRAFVIILTNSSLLITPLEPTITSF 541
Query: 462 PWEGKGLAIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQPIY 292
PWEGKGLAIVLPKG F+ EK S KLA S ED LARFEGGSSSS+PPMKC +QPIY
Sbjct: 540 PWEGKGLAIVLPKGAAGFKQEKLSNKLAGSAEDALARFEGGSSSSKPPMKC*NQPIY 370
Score = 208 bits (448), Expect(2) = 2e-053
Identities = 93/117 (79%), Positives = 99/117 (84%)
Frame = +2 / +2
Query: 284 SEKYMG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQG 463
S+ YMG* HFMGG EDDEPPSKRAR SS E ASL D FS K + PLGSTMARPLPSQG
Sbjct: 362 SKIYMG*F*HFMGGFEDDEPPSKRARASSAEPASLLDSFSCLKPAAPLGSTMARPLPSQG 541
Query: 464 KEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
KEVMVGSKGVIK++EFVRIITK LYSLGYEKSGAVLEEESGI LH+P V LFR QV+
Sbjct: 542 KEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHSPTVNLFRRQVL 712
Score = 149 bits (319), Expect = 4e-034
Identities = 65/118 (55%), Positives = 79/118 (66%)
Frame = -3 / -3
Query: 640 PSNHLFSEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFP 461
P +L SEK H M + *F L+NCS FFI+K IQS DYP+K FP
Sbjct: 718 PIKYLPSEKIHCWGMQSYS*FFLKNCSAFFITKAIQSLCDYPHKFIPLNNTFRANHNFFP 539
Query: 460 LGRQRSSHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAHIFF 287
LGRQRSSHC SQR G+F+ R+T+ TC F *GCSCAF GW ++F+TSHEM +SAHI+F
Sbjct: 538 LGRQRSSHCASQRSGRFQARKTI*QTCWFC*GCSCAFRGWFIVFKTSHEMLKSAHIYF 365
Score = 143 bits (306), Expect = 2e-032
Identities = 76/120 (63%), Positives = 83/120 (69%)
Frame = -2 / -2
Query: 647 PISIQSPVL*KVSP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*L 468
P S Q P *K S G + LI P ELL FFH Q YTE *LS QI PS**H +QP*L
Sbjct: 725 PNSHQVPAF*KDSLLGNAELFLILPQELLRFFHNQGYTEPL*LSSQIHPS**HL*SQP*L 546
Query: 467 LSLGKAKV*PLYFPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISPYIF 288
LS GKAKV*PL FPK+ ++S +N L NL +LLRM LRV RV LQNLP*N KISPYIF
Sbjct: 545 LSPGKAKV*PLCFPKERQVSSKKNYLTNLLVLLRMLLRVSRVVHRLQNLP*NVKISPYIF 366
Score = 129 bits (277), Expect(3) = 4e-037
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = +1 / +1
Query: 292 IYGLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRERS 471
IYGLIL FHGRF*R TL+TRK+ILSR KF R F + E +SFGK+NG*TFAFP ERS
Sbjct: 370 IYGLILTFHGRF*RR*TTLETRKSILSRTSKFVR*FFLLETCRSFGKHNG*TFAFPGERS 549
Query: 472 YGWFQGCY*EGGIC*DNHQNSV 537
YGW CY*EG IC DNH+ SV
Sbjct: 550 YGWL*RCY*EG*ICEDNHKGSV 615
Score = 43.7 bits (89), Expect(3) = 4e-037
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +3 / +3
Query: 516 G*SPKLCIVLDMKKVEQFWRRNQGLFYITLW*NFSENR*LDG 641
G*S +LCI L MKK EQF R+NQ I * FSE R L G
Sbjct: 594 G*SQRLCIALVMKKAEQFLRKNQE*LCIPQQ*IFSEGRYLMG 719
Score = 26.7 bits (52), Expect(2) = 7e-056
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 304 SAHIFFTSGKVMVCNLHTNCC 242
S +IF TS ++M+C+ N C
Sbjct: 380 SPYIFLTSREMMLCSSERNAC 318
Score = 25.4 bits (49), Expect(2) = 2e-053
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1 / +2
Query: 190 GDRDSRLKNPLSVSVTVCNSLCGDCIPSPSLK*KIY 297
G R N LS+ T C CI S K KIY
Sbjct: 266 GGRGGPWSNVLSLYTTHCKHSARSCITSSP*KSKIY 373
Score = 23.5 bits (45), Expect(3) = 4e-037
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 242 ATVCVEIAYHHLP*SEKYM 298
A++ + A HHLP S+KY+
Sbjct: 318 ASIPLGAA*HHLPRSQKYI 374
>ref|NT_107178.1| Oryza sativa (japonica cultivar-group)
Length = 7645238
Score = 217 bits (468), Expect = 1e-054
Identities = 92/117 (78%), Positives = 98/117 (83%)
Frame = -1 / -1
Query: 642 FHPITCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSF 463
F TC LK FT+G C++IPDSSSRTAPLFS PRLYR VIILTNSS LITPLEPTITSF
Sbjct: 5232956 FPSSTCLLKRFTVGECRVIPDSSSRTAPLFS*PRLYRAFVIILTNSSLLITPLEPTITSF 5232777
Query: 462 PWEGKGLAIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQPIY 292
PWEGKGLAIVLPKG F+ EK S KLA STED LARFEGGSSSS+PPMKC +QPIY
Sbjct: 5232776 PWEGKGLAIVLPKGAAGFKQEKLSNKLAGSTEDALARFEGGSSSSKPPMKC*NQPIY 5232606
Score = 210 bits (452), Expect(2) = 1e-053
Identities = 94/117 (80%), Positives = 100/117 (85%)
Frame = +2 / +1
Query: 284 SEKYMG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQG 463
S+ YMG* HFMGG EDDEPPSKRAR SSVE ASL D FS K + PLGSTMARPLPSQG
Sbjct: 5232598 SKIYMG*F*HFMGGFEDDEPPSKRARASSVEPASLLDSFSCLKPAAPLGSTMARPLPSQG 5232777
Query: 464 KEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
KEVMVGSKGVIK++EFVRIITK LYSLGYEKSGAVLEEESGI LH+P V LFR QV+
Sbjct: 5232778 KEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHSPTVNLFRRQVL 5232948
Score = 153 bits (328), Expect = 2e-035
Identities = 66/118 (55%), Positives = 80/118 (67%)
Frame = -3 / -3
Query: 640 PSNHLFSEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFP 461
P +L SEK H M + *F L+NCS FFI+K IQS DYP+K FP
Sbjct: 5232954 PIKYLPSEKIHCWGMQSYS*FFLKNCSAFFITKAIQSLCDYPHKFIPLNNTFRANHNFFP 5232775
Query: 460 LGRQRSSHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAHIFF 287
LGRQRSSHC SQR G+F+ R+T+ TC FY*GCSCAF GW ++F+TSHEM +SAHI+F
Sbjct: 5232774 LGRQRSSHCASQRSGRFQARKTI*QTCWFY*GCSCAFRGWFIVFKTSHEMLKSAHIYF 5232601
Score = 143 bits (306), Expect = 2e-032
Identities = 76/120 (63%), Positives = 83/120 (69%)
Frame = -2 / -2
Query: 647 PISIQSPVL*KVSP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*L 468
P S Q P *K S G + LI P ELL FFH Q YTE *LS QI PS**H +QP*L
Sbjct: 5232961 PNSHQVPAF*KDSLLGNAELFLILPQELLRFFHNQGYTEPL*LSSQIHPS**HL*SQP*L 5232782
Query: 467 LSLGKAKV*PLYFPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISPYIF 288
LS GKAKV*PL FPK+ ++S +N L NL +LLRM LRV RV LQNLP*N KISPYIF
Sbjct: 5232781 LSPGKAKV*PLCFPKERQVSSKKNYLTNLLVLLRMLLRVSRVVHRLQNLP*NVKISPYIF 5232602
Score = 129 bits (277), Expect(2) = 2e-035
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = +1 / +3
Query: 292 IYGLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRERS 471
IYGLIL FHGRF*R TL+TRK+ILSR KF R F + E +SFGK+NG*TFAFP ERS
Sbjct: 5232606 IYGLILTFHGRF*RR*TTLETRKSILSRTSKFVR*FFLLETCRSFGKHNG*TFAFPGERS 5232785
Query: 472 YGWFQGCY*EGGIC*DNHQNSV 537
YGW CY*EG IC DNH+ SV
Sbjct: 5232786 YGWL*RCY*EG*ICEDNHKGSV 5232851
Score = 105 bits (224), Expect(2) = 3e-021
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +3 / +2
Query: 288 KNIWADLGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFPILWEVQWLDLCLPKGK 467
K IWAD ISWEVLK +HP+NAQEHPQ*N QV V N P+LWE QWLDLCLP+GK
Sbjct: 5232602 KYIWADFNISWEVLKTMNHPRNAQEHPQ*NQQVC*IVFLA*NLPLLWEAQWLDLCLPRGK 5232781
Query: 468 K 470
K
Sbjct: 5232782 K 5232784
Score = 43.7 bits (89), Expect(2) = 2e-035
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +3 / +2
Query: 516 G*SPKLCIVLDMKKVEQFWRRNQGLFYITLW*NFSENR*LDG 641
G*S +LCI L MKK EQF R+NQ I * FSE R L G
Sbjct: 5232830 G*SQRLCIALVMKKAEQFLRKNQE*LCIPQQ*IFSEGRYLMG 5232955
Score = 39.6 bits (80), Expect(2) = 1e-053
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1 / +1
Query: 46 KHHHPSLPPYASSPPRALSPPNPTAGA 126
+HHH PP + PP A SPP+P A A
Sbjct: 187354 RHHHQLPPPPQADPPPAASPPDPAAAA 187434
Score = 35.0 bits (70), Expect(2) = 3e-021
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1 / +3
Query: 4 LSRFYSVGSPLPQAKHHHPSLPPYASSPPRALSPPNPTAGAGDSL 138
L R +S SP P A+ HP +P PP P AGA ++
Sbjct: 2771928 LPRHHSKPSPRPTARRRHPLRSAPPRAPSNRRRPPPPQAGASGAV 2772062
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 217 bits (468), Expect = 1e-054
Identities = 92/117 (78%), Positives = 98/117 (83%)
Frame = -1 / -1
Query: 642 FHPITCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSF 463
F TC LK FT+G C++IPDSSSRTAPLFS PRLYR VIILTNSS LITPLEPTITSF
Sbjct: 11231638 FPSSTCLLKRFTVGECRVIPDSSSRTAPLFS*PRLYRAFVIILTNSSLLITPLEPTITSF 11231459
Query: 462 PWEGKGLAIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQPIY 292
PWEGKGLAIVLPKG F+ EK S KLA STED LARFEGGSSSS+PPMKC +QPIY
Sbjct: 11231458 PWEGKGLAIVLPKGAAGFKQEKLSNKLAGSTEDALARFEGGSSSSKPPMKC*NQPIY 11231288
Score = 210 bits (452), Expect = 2e-052
Identities = 94/117 (80%), Positives = 100/117 (85%)
Frame = +2 / +3
Query: 284 SEKYMG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQG 463
S+ YMG* HFMGG EDDEPPSKRAR SSVE ASL D FS K + PLGSTMARPLPSQG
Sbjct: 11231280 SKIYMG*F*HFMGGFEDDEPPSKRARASSVEPASLLDSFSCLKPAAPLGSTMARPLPSQG 11231459
Query: 464 KEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
KEVMVGSKGVIK++EFVRIITK LYSLGYEKSGAVLEEESGI LH+P V LFR QV+
Sbjct: 11231460 KEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHSPTVNLFRRQVL 11231630
Score = 153 bits (328), Expect = 2e-035
Identities = 66/118 (55%), Positives = 80/118 (67%)
Frame = -3 / -3
Query: 640 PSNHLFSEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFP 461
P +L SEK H M + *F L+NCS FFI+K IQS DYP+K FP
Sbjct: 11231636 PIKYLPSEKIHCWGMQSYS*FFLKNCSAFFITKAIQSLCDYPHKFIPLNNTFRANHNFFP 11231457
Query: 460 LGRQRSSHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAHIFF 287
LGRQRSSHC SQR G+F+ R+T+ TC FY*GCSCAF GW ++F+TSHEM +SAHI+F
Sbjct: 11231456 LGRQRSSHCASQRSGRFQARKTI*QTCWFY*GCSCAFRGWFIVFKTSHEMLKSAHIYF 11231283
Score = 143 bits (306), Expect = 2e-032
Identities = 76/120 (63%), Positives = 83/120 (69%)
Frame = -2 / -2
Query: 647 PISIQSPVL*KVSP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*L 468
P S Q P *K S G + LI P ELL FFH Q YTE *LS QI PS**H +QP*L
Sbjct: 11231643 PNSHQVPAF*KDSLLGNAELFLILPQELLRFFHNQGYTEPL*LSSQIHPS**HL*SQP*L 11231464
Query: 467 LSLGKAKV*PLYFPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISPYIF 288
LS GKAKV*PL FPK+ ++S +N L NL +LLRM LRV RV LQNLP*N KISPYIF
Sbjct: 11231463 LSPGKAKV*PLCFPKERQVSSKKNYLTNLLVLLRMLLRVSRVVHRLQNLP*NVKISPYIF 11231284
Score = 129 bits (277), Expect(2) = 2e-035
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = +1 / +2
Query: 292 IYGLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRERS 471
IYGLIL FHGRF*R TL+TRK+ILSR KF R F + E +SFGK+NG*TFAFP ERS
Sbjct: 11231288 IYGLILTFHGRF*RR*TTLETRKSILSRTSKFVR*FFLLETCRSFGKHNG*TFAFPGERS 11231467
Query: 472 YGWFQGCY*EGGIC*DNHQNSV 537
YGW CY*EG IC DNH+ SV
Sbjct: 11231468 YGWL*RCY*EG*ICEDNHKGSV 11231533
Score = 105 bits (224), Expect = 5e-021
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +3 / +1
Query: 288 KNIWADLGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFPILWEVQWLDLCLPKGK 467
K IWAD ISWEVLK +HP+NAQEHPQ*N QV V N P+LWE QWLDLCLP+GK
Sbjct: 11231284 KYIWADFNISWEVLKTMNHPRNAQEHPQ*NQQVC*IVFLA*NLPLLWEAQWLDLCLPRGK 11231463
Query: 468 K 470
K
Sbjct: 11231464 K 11231466
Score = 43.7 bits (89), Expect(2) = 2e-035
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +3 / +1
Query: 516 G*SPKLCIVLDMKKVEQFWRRNQGLFYITLW*NFSENR*LDG 641
G*S +LCI L MKK EQF R+NQ I * FSE R L G
Sbjct: 11231512 G*SQRLCIALVMKKAEQFLRKNQE*LCIPQQ*IFSEGRYLMG 11231637
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 217 bits (468), Expect = 1e-054
Identities = 92/117 (78%), Positives = 98/117 (83%)
Frame = -1 / -3
Query: 642 FHPITCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSF 463
F TC LK FT+G C++IPDSSSRTAPLFS PRLYR VIILTNSS LITPLEPTITSF
Sbjct: 11231638 FPSSTCLLKRFTVGECRVIPDSSSRTAPLFS*PRLYRAFVIILTNSSLLITPLEPTITSF 11231459
Query: 462 PWEGKGLAIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQPIY 292
PWEGKGLAIVLPKG F+ EK S KLA STED LARFEGGSSSS+PPMKC +QPIY
Sbjct: 11231458 PWEGKGLAIVLPKGAAGFKQEKLSNKLAGSTEDALARFEGGSSSSKPPMKC*NQPIY 11231288
Score = 210 bits (452), Expect = 2e-052
Identities = 94/117 (80%), Positives = 100/117 (85%)
Frame = +2 / +3
Query: 284 SEKYMG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQG 463
S+ YMG* HFMGG EDDEPPSKRAR SSVE ASL D FS K + PLGSTMARPLPSQG
Sbjct: 11231280 SKIYMG*F*HFMGGFEDDEPPSKRARASSVEPASLLDSFSCLKPAAPLGSTMARPLPSQG 11231459
Query: 464 KEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
KEVMVGSKGVIK++EFVRIITK LYSLGYEKSGAVLEEESGI LH+P V LFR QV+
Sbjct: 11231460 KEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHSPTVNLFRRQVL 11231630
Score = 153 bits (328), Expect = 2e-035
Identities = 66/118 (55%), Positives = 80/118 (67%)
Frame = -3 / -2
Query: 640 PSNHLFSEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFP 461
P +L SEK H M + *F L+NCS FFI+K IQS DYP+K FP
Sbjct: 11231636 PIKYLPSEKIHCWGMQSYS*FFLKNCSAFFITKAIQSLCDYPHKFIPLNNTFRANHNFFP 11231457
Query: 460 LGRQRSSHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAHIFF 287
LGRQRSSHC SQR G+F+ R+T+ TC FY*GCSCAF GW ++F+TSHEM +SAHI+F
Sbjct: 11231456 LGRQRSSHCASQRSGRFQARKTI*QTCWFY*GCSCAFRGWFIVFKTSHEMLKSAHIYF 11231283
Score = 143 bits (306), Expect = 2e-032
Identities = 76/120 (63%), Positives = 83/120 (69%)
Frame = -2 / -1
Query: 647 PISIQSPVL*KVSP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*L 468
P S Q P *K S G + LI P ELL FFH Q YTE *LS QI PS**H +QP*L
Sbjct: 11231643 PNSHQVPAF*KDSLLGNAELFLILPQELLRFFHNQGYTEPL*LSSQIHPS**HL*SQP*L 11231464
Query: 467 LSLGKAKV*PLYFPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISPYIF 288
LS GKAKV*PL FPK+ ++S +N L NL +LLRM LRV RV LQNLP*N KISPYIF
Sbjct: 11231463 LSPGKAKV*PLCFPKERQVSSKKNYLTNLLVLLRMLLRVSRVVHRLQNLP*NVKISPYIF 11231284
Score = 129 bits (277), Expect = 2e-028
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = +1 / +2
Query: 292 IYGLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRERS 471
IYGLIL FHGRF*R TL+TRK+ILSR KF R F + E +SFGK+NG*TFAFP ERS
Sbjct: 11231288 IYGLILTFHGRF*RR*TTLETRKSILSRTSKFVR*FFLLETCRSFGKHNG*TFAFPGERS 11231467
Query: 472 YGWFQGCY*EGGIC*DNHQNSV 537
YGW CY*EG IC DNH+ SV
Sbjct: 11231468 YGWL*RCY*EG*ICEDNHKGSV 11231533
Score = 105 bits (224), Expect = 5e-021
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +3 / +1
Query: 288 KNIWADLGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFPILWEVQWLDLCLPKGK 467
K IWAD ISWEVLK +HP+NAQEHPQ*N QV V N P+LWE QWLDLCLP+GK
Sbjct: 11231284 KYIWADFNISWEVLKTMNHPRNAQEHPQ*NQQVC*IVFLA*NLPLLWEAQWLDLCLPRGK 11231463
Query: 468 K 470
K
Sbjct: 11231464 K 11231466
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 217 bits (468), Expect = 1e-054
Identities = 92/117 (78%), Positives = 98/117 (83%)
Frame = -1 / -3
Query: 642 FHPITCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSF 463
F TC LK FT+G C++IPDSSSRTAPLFS PRLYR VIILTNSS LITPLEPTITSF
Sbjct: 11200004 FPSSTCLLKRFTVGECRVIPDSSSRTAPLFS*PRLYRAFVIILTNSSLLITPLEPTITSF 11199825
Query: 462 PWEGKGLAIVLPKGLENFENEKQSGKLADSTEDVLARFEGGSSSSEPPMKCQDQPIY 292
PWEGKGLAIVLPKG F+ EK S KLA STED LARFEGGSSSS+PPMKC +QPIY
Sbjct: 11199824 PWEGKGLAIVLPKGAAGFKQEKLSNKLAGSTEDALARFEGGSSSSKPPMKC*NQPIY 11199654
Score = 210 bits (452), Expect = 2e-052
Identities = 94/117 (80%), Positives = 100/117 (85%)
Frame = +2 / +1
Query: 284 SEKYMG*SWHFMGGSEDDEPPSKRARTSSVESASLPDCFSFSKFSNPLGSTMARPLPSQG 463
S+ YMG* HFMGG EDDEPPSKRAR SSVE ASL D FS K + PLGSTMARPLPSQG
Sbjct: 11199646 SKIYMG*F*HFMGGFEDDEPPSKRARASSVEPASLLDSFSCLKPAAPLGSTMARPLPSQG 11199825
Query: 464 KEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHNPMVKLFREQVI 634
KEVMVGSKGVIK++EFVRIITK LYSLGYEKSGAVLEEESGI LH+P V LFR QV+
Sbjct: 11199826 KEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHSPTVNLFRRQVL 11199996
Score = 153 bits (328), Expect = 2e-035
Identities = 66/118 (55%), Positives = 80/118 (67%)
Frame = -3 / -2
Query: 640 PSNHLFSEKFHHRVM*NNP*FLLQNCSTFFISKTIQSFGDYPNKXXXXXXXXXXXXXXFP 461
P +L SEK H M + *F L+NCS FFI+K IQS DYP+K FP
Sbjct: 11200002 PIKYLPSEKIHCWGMQSYS*FFLKNCSAFFITKAIQSLCDYPHKFIPLNNTFRANHNFFP 11199823
Query: 460 LGRQRSSHCTSQRIGKFRKRETVW*TCRFY*GCSCAF*GWLVIFRTSHEMPRSAHIFF 287
LGRQRSSHC SQR G+F+ R+T+ TC FY*GCSCAF GW ++F+TSHEM +SAHI+F
Sbjct: 11199822 LGRQRSSHCASQRSGRFQARKTI*QTCWFY*GCSCAFRGWFIVFKTSHEMLKSAHIYF 11199649
Score = 143 bits (306), Expect = 2e-032
Identities = 76/120 (63%), Positives = 83/120 (69%)
Frame = -2 / -1
Query: 647 PISIQSPVL*KVSP*GYVK*SLIPPPELLHFFHIQDYTEFW*LS*QIPPS**HPWNQP*L 468
P S Q P *K S G + LI P ELL FFH Q YTE *LS QI PS**H +QP*L
Sbjct: 11200009 PNSHQVPAF*KDSLLGNAELFLILPQELLRFFHNQGYTEPL*LSSQIHPS**HL*SQP*L 11199830
Query: 467 LSLGKAKV*PLYFPKDWKISKTRNSLVNLQILLRMFLRVLRVARHLQNLP*NAKISPYIF 288
LS GKAKV*PL FPK+ ++S +N L NL +LLRM LRV RV LQNLP*N KISPYIF
Sbjct: 11199829 LSPGKAKV*PLCFPKERQVSSKKNYLTNLLVLLRMLLRVSRVVHRLQNLP*NVKISPYIF 11199650
Score = 129 bits (277), Expect = 2e-028
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = +1 / +3
Query: 292 IYGLILAFHGRF*R*RATLKTRKNILSRICKFTRLFLVFEIFQSFGKYNG*TFAFPRERS 471
IYGLIL FHGRF*R TL+TRK+ILSR KF R F + E +SFGK+NG*TFAFP ERS
Sbjct: 11199654 IYGLILTFHGRF*RR*TTLETRKSILSRTSKFVR*FFLLETCRSFGKHNG*TFAFPGERS 11199833
Query: 472 YGWFQGCY*EGGIC*DNHQNSV 537
YGW CY*EG IC DNH+ SV
Sbjct: 11199834 YGWL*RCY*EG*ICEDNHKGSV 11199899
Score = 105 bits (224), Expect = 5e-021
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +3 / +2
Query: 288 KNIWADLGISWEVLKMTSHPQNAQEHPQ*NLQVYQTVSRFRNFPILWEVQWLDLCLPKGK 467
K IWAD ISWEVLK +HP+NAQEHPQ*N QV V N P+LWE QWLDLCLP+GK
Sbjct: 11199650 KYIWADFNISWEVLKTMNHPRNAQEHPQ*NQQVC*IVFLA*NLPLLWEAQWLDLCLPRGK 11199829
Query: 468 K 470
K
Sbjct: 11199830 K 11199832
>gb|AQ158243.1|AQ158243 nbxb0010J20r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0010J20r, DNA sequence
Length = 611
Score = 148 bits (318), Expect = 5e-034
Identities = 62/79 (78%), Positives = 66/79 (83%)
Frame = -1 / +3
Query: 642 FHPITCSLKSFTIGLCKIIPDSSSRTAPLFSYPRLYRVLVIILTNSSFLITPLEPTITSF 463
F TC LK FT+G C++IPDSSSRTAPLFS PRLYR VIILTNSS LITPLEPTITSF
Sbjct: 375 FPSSTCLLKRFTVGECRVIPDSSSRTAPLFS*PRLYRAFVIILTNSSLLITPLEPTITSF 554
Query: 462 PWEGKGLAIVLPKGLENFE 406
PWEGKGLAIVLPKG F+
Sbjct: 555 PWEGKGLAIVLPKGAAGFK 611
Score = 146 bits (313), Expect = 3e-033
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +2 / -2
Query: 422 PLGSTMARPLPSQGKEVMVGSKGVIKKEEFVRIITKTLYSLGYEKSGAVLEEESGIILHN 601
PLGSTMARPLPSQGKEVMVGSKGVIK++EFVRIITK LYSLGYEKSGAVLEEESGI LH+
Sbjct: 595 PLGSTMARPLPSQGKEVMVGSKGVIKRDEFVRIITKALYSLGYEKSGAVLEEESGITLHS 416
Query: 602 PMVKLFREQVI 634
P V LFR QV+
Sbjct: 415 PTVNLFRRQVL 383
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,744,210,566
Number of Sequences: 438736
Number of extensions: 83990455
Number of successful extensions: 1115558
Number of sequences better than 1.0e-020: 14
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 144306473079
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)