TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAZ2b01.yg.2.1
(541 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_467688.1| Oryza sativa (japonica cultivar-group), mRNA 297 6e-079
dbj|AP005112.3| Oryza sativa (japonica cultivar-group) geno... 126 2e-065
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 126 7e-062
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 126 5e-048
gb|AACV01005369.1| Oryza sativa (japonica cultivar-group) c... 126 5e-044
ref|XM_469566.1| Oryza sativa (japonica cultivar-group), mRNA 145 3e-042
dbj|AK121000.1| Oryza sativa (japonica cultivar-group) cDNA... 151 1e-036
ref|NM_196042.1| Oryza sativa (japonica cultivar-group) put... 151 1e-036
dbj|AK121135.1| Oryza sativa (japonica cultivar-group) cDNA... 148 2e-035
ref|XM_463649.1| Oryza sativa (japonica cultivar-group), p... 148 2e-035
dbj|AK067580.1| Oryza sativa (japonica cultivar-group) cDNA... 148 2e-035
gb|CB649579.1|CB649579 OSJNEb13J09.f OSJNEb Oryza sativa (j... 148 2e-035
gb|CF303918.1|CF303918 ABF1--03-J08.g1 ABF3-overexpressing ... 148 2e-035
gb|AACV01007799.1| Oryza sativa (japonica cultivar-group) c... 90 2e-033
gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17... 90 1e-032
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 90 8e-030
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 90 5e-029
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 76 2e-027
dbj|AP004672.3| Oryza sativa (japonica cultivar-group) geno... 76 2e-027
dbj|AP006167.3| Oryza sativa (japonica cultivar-group) geno... 76 2e-027
gb|AACV01002960.1| Oryza sativa (japonica cultivar-group) c... 76 2e-027
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 126 2e-027
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 126 2e-027
gb|CF304999.1|CF304999 ABF1--06-I06.g1 ABF3-overexpressing ... 116 5e-026
gb|CH401253.1| Oryza sativa (japonica cultivar-group) chrom... 70 1e-023
ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chr... 70 1e-023
gb|AC092548.10| Oryza sativa chromosome 10 BAC OSJNBa0073L0... 70 1e-023
gb|AACV01021333.1| Oryza sativa (japonica cultivar-group) c... 70 1e-023
>ref|XM_467688.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2955
Score = 297 bits (643), Expect = 6e-079
Identities = 122/143 (85%), Positives = 133/143 (93%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L NDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCD+VPK V+
Sbjct: 1261 LINDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDDVPKVVI 1440
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTN 371
GDPWR+RQILTNLVGNAVKFTERGHVFVRVCLA+NS +EA QVLNG MNGKDG+V++T N
Sbjct: 1441 GDPWRYRQILTNLVGNAVKFTERGHVFVRVCLAENSKVEANQVLNGTMNGKDGKVETTAN 1620
Query: 372 GAFNTLSGFEAAXXRNSWQYFXM 440
GAFNTLSGF+AA RN+W YF +
Sbjct: 1621 GAFNTLSGFQAADERNNWDYFKL 1689
Score = 264 bits (570), Expect = 7e-069
Identities = 125/175 (71%), Positives = 132/175 (75%)
Frame = -1 / -2
Query: 541 VXXILIXSVTXXESX*SEXXXXRSSKRDSLSERSIXKYCQLFRXXAASNPLRVLKAPLVV 362
V ILI VT +S * + SS SLS+ S K QL R AA PL+VLKAPL V
Sbjct: 1790 VSSILIIKVTQSQSF**DLSHSSSSIWGSLSDSSSLK*SQLLRSSAA*KPLKVLKAPLAV 1611
Query: 361 ESTLPSFPFMAPFRT*PASIFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTS 182
STLPSFPFM P RT* AS FE SA+QTRTNT PRSVNLTA PTKFVSICR L GSP T+
Sbjct: 1610 VSTLPSFPFMVPLRT*LASTFEFSARQTRTNTWPRSVNLTAFPTKFVSICRYLHGSPITT 1431
Query: 181 FGTLSHTNTASSMHFSRDFEENKEITSSMRERRSKGTASSSNFPASIFARSRTSF 17
FGT SHTNTASSMHFS DFEENKEITSSMR+RRS GTASSSNFPASI ARS TSF
Sbjct: 1430 FGTSSHTNTASSMHFSLDFEENKEITSSMRDRRSNGTASSSNFPASILARSSTSF 1266
Score = 225 bits (485), Expect = 4e-057
Identities = 103/174 (59%), Positives = 115/174 (66%)
Frame = -3 / -1
Query: 533 NTYRXCDXXXIXLIRXXXXKIIQKGLLIREEHXKILPTISSXCCFKPTQSIEGTISC*IN 354
NTY I LIR K+I GL IR + KI+P I+ C K TQSIEG ISC +N
Sbjct: 1782 NTYHQGHTVTIILIRSVALKLIHMGLFIR*QQLKIIPVIALICGLKTTQSIEGAISCSLN 1603
Query: 353 STIFPIHGSI*DLTGFHI*VISQTDPHKYMTPFCEFDCIADQIC*YLPKPPRISKNILRN 174
+FPIHGSI DL FH *V+SQ D HKYM PFCEFDCI+ QIC YL P IS N N
Sbjct: 1602 FAVFPIHGSIKDLISFHF*VLSQADSHKYMAPFCEFDCISHQICQYLSISPWISNNNFWN 1423
Query: 173 IVTYKYCKLNALLP*L*RK*GNNIIHERTQVKRHRFKL*LSSFNLCSIKDIIXQ 12
I+TYK+CKLNALL * *RK*G++IIHER QVK H KL FNL IK II Q
Sbjct: 1422 IITYKHCKLNALLS*F*RK*GDHIIHERPQVKWHCLKLQFPCFNLSPIKYIIYQ 1261
Score = 205 bits (443), Expect = 2e-051
Identities = 98/163 (60%), Positives = 110/163 (67%)
Frame = +1 / +2
Query: 16 *MMSLIEQRLKLES*SLKRCLLTCVLSWMMLFPYFLQSHGRSALSLQYLYVTMFRRMFLE 195
*MM LI RLK + SL++C LTC LSWMM PYFLQ+ RSALSLQ LYV MF+++ LE
Sbjct: 1265 *MMYLIGLRLKQGNWSLRQCHLTCGLSWMM*SPYFLQNQERSALSLQCLYVMMFQKLLLE 1444
Query: 196 ILGGFGRY*QIWSAMQSNSQNGVMYLCGSVWLITQIWKPVRS*MEP*MGKMVELIQQLMV 375
I G +Y*QIW MQSNSQNG MYLC S WL TQ WK ++S MEP*MGK +L QLM
Sbjct: 1445 IHGDIDKY*QIWWEMQSNSQNGAMYLCESAWLRTQKWKLIKSLMEP*MGKTAKLRLQLMA 1624
Query: 376 PSIL*VGLKQXXDEIVGNIXXCSSLIRSPFWMILXXXILIKXI 504
PSIL*V K I G I C LI+SP WM L LIK I
Sbjct: 1625 PSIL*VVFKPQMSAITGIILSCCYLIKSPIWMSLSATDLIKMI 1753
Score = 194 bits (419), Expect = 5e-048
Identities = 92/153 (60%), Positives = 109/153 (71%)
Frame = +2 / +3
Query: 17 K*CP*SSKD*SWKVRA*SGAF*PAFSHG*CYFLIFFKVTGEVH*ACSICM*QCSEGCSWR 196
K*C *S D*S ++ A* A *PA SHG*C LIFFK+ EVH*ACS+CM* CS+ C WR
Sbjct: 1266 K*CT*SG*D*SREIGA*GSAI*PAVSHG*CDLLIFFKIKREVH*ACSVCM**CSKSCYWR 1445
Query: 197 SLEVSADTNKFGRQCSQIHRTGSCICAGLFG**LKYGSRSGPKWSHEWERW*S*FNN*WC 376
S+E+S +T+KFG +CSQIHRTG CICA L G* LK GS S P W+HEWER S* +*W
Sbjct: 1446 SMEISTNTDKFGGKCSQIHRTGPCICASLPG*ELKSGS*SSP*WNHEWERRQS*DYS*WR 1625
Query: 377 LQYSEWV*SSXXTK*LAIFXDAPL**GVPFG*S 475
LQY EW S +*L +F A +** P+G*+
Sbjct: 1626 LQYFEWFSSRR*AQ*LGLF*AAAI**RAPYG*A 1724
Score = 189 bits (407), Expect = 2e-046
Identities = 98/173 (56%), Positives = 107/173 (61%)
Frame = -2 / -3
Query: 534 QYLSXV*XXXNXFDQNXXXQDHPKGTPYQRGASXNIANYFVXXLLQTHSEY*RHH*LLNQ 355
QYLS N FD+ Q HP G YQ A+ N +Y L+ HS+Y*R H*L +Q
Sbjct: 1783 QYLSSRSHSHNHFDKICRTQAHPYGALYQIAAA*NNPSYCAHLRLENHSKY*RRH*L*SQ 1604
Query: 354 LYHLSHSWLHLGPDRLPYLSYQPNRPAQIHDPVL*I*LHCRPNLLVSAETSKDLQEHPSE 175
L LSHSW H G D LP LS QP R AQIH PVL*I*LH PNL V + S DLQ E
Sbjct: 1603 LCRLSHSWFH*GLD*LPLLSSQPGRLAQIHGPVL*I*LHFPPNLSVFVDISMDLQ*QLLE 1424
Query: 174 HCHIQILQAQCTSPVTLKKIRK*HHP*ENAGQKAPLQALTFQLQSLLDQGHHL 16
H HIQ LQAQCTS + LKKIR+ HHP*E AGQ A QA LQS DQ HHL
Sbjct: 1423 HHHIQTLQAQCTSLLILKKIRRSHHP*ETAGQMALPQAPISLLQS*PDQVHHL 1265
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0684F11
Length = 147731
Score = 126 bits (269), Expect(3) = 2e-065
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = +3 / +3
Query: 246 KFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTNGAFNTLSGFEAAXXRNSW 425
+FTERGHVFVRVCLA+NS +EA QVLNG MNGKDG+V++T NGAFNTLSGF+AA RN+W
Sbjct: 29151 QFTERGHVFVRVCLAENSKVEANQVLNGTMNGKDGKVETTANGAFNTLSGFQAADERNNW 29330
Query: 426 QYFXM 440
YF +
Sbjct: 29331 DYFKL 29345
Score = 123 bits (264), Expect(3) = 1e-056
Identities = 53/95 (55%), Positives = 60/95 (63%)
Frame = -3 / -1
Query: 533 NTYRXCDXXXIXLIRXXXXKIIQKGLLIREEHXKILPTISSXCCFKPTQSIEGTISC*IN 354
NTY I LIR K+I GL IR + KI+P I+ C K TQSIEG ISC +N
Sbjct: 29438 NTYHQGHTVTIILIRSVALKLIHMGLFIR*QQLKIIPVIALICGLKTTQSIEGAISCSLN 29259
Query: 353 STIFPIHGSI*DLTGFHI*VISQTDPHKYMTPFCE 249
+FPIHGSI DL FH *V+SQ D HKYM PFCE
Sbjct: 29258 FAVFPIHGSIKDLISFHF*VLSQADSHKYMAPFCE 29154
Score = 114 bits (244), Expect(3) = 5e-040
Identities = 59/98 (60%), Positives = 64/98 (65%)
Frame = -1 / -2
Query: 541 VXXILIXSVTXXESX*SEXXXXRSSKRDSLSERSIXKYCQLFRXXAASNPLRVLKAPLVV 362
V ILI VT +S * + SS SLS+ S K QL R AA PL+VLKAPL V
Sbjct: 29446 VSSILIIKVTQSQSF**DLSHSSSSIWGSLSDSSSLK*SQLLRSSAA*KPLKVLKAPLAV 29267
Query: 361 ESTLPSFPFMAPFRT*PASIFELSAKQTRTNT*PRSVN 248
STLPSFPFM P RT* AS FE SA+QTRTNT PRSVN
Sbjct: 29266 VSTLPSFPFMVPLRT*LASTFEFSARQTRTNTWPRSVN 29153
Score = 105 bits (225), Expect(3) = 2e-065
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = +3 / +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVF 161
L NDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIE++ F
Sbjct: 28548 LINDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIEVSFF 28697
Score = 105 bits (223), Expect(3) = 4e-040
Identities = 49/86 (56%), Positives = 54/86 (62%)
Frame = +1 / +1
Query: 247 NSQNGVMYLCGSVWLITQIWKPVRS*MEP*MGKMVELIQQLMVPSIL*VGLKQXXDEIVG 426
+SQNG MYLC S WL TQ WK ++S MEP*MGK +L QLM PSIL*V K I G
Sbjct: 29152 SSQNGAMYLCESAWLRTQKWKLIKSLMEP*MGKTAKLRLQLMAPSIL*VVFKPQMSAITG 29331
Query: 427 NIXXCSSLIRSPFWMILXXXILIKXI 504
I C LI+SP WM L LIK I
Sbjct: 29332 IILSCCYLIKSPIWMSLSATDLIKMI 29409
Score = 99.6 bits (211), Expect(3) = 2e-031
Identities = 50/95 (52%), Positives = 56/95 (58%)
Frame = -2 / -3
Query: 534 QYLSXV*XXXNXFDQNXXXQDHPKGTPYQRGASXNIANYFVXXLLQTHSEY*RHH*LLNQ 355
QYLS N FD+ Q HP G YQ A+ N +Y L+ HS+Y*R H*L +Q
Sbjct: 29439 QYLSSRSHSHNHFDKICRTQAHPYGALYQIAAA*NNPSYCAHLRLENHSKY*RRH*L*SQ 29260
Query: 354 LYHLSHSWLHLGPDRLPYLSYQPNRPAQIHDPVL* 250
L LSHSW H G D LP LS QP R AQIH PVL*
Sbjct: 29259 LCRLSHSWFH*GLD*LPLLSSQPGRLAQIHGPVL* 29155
Score = 90.9 bits (192), Expect(3) = 1e-056
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1 / -2
Query: 151 SSMHFSRDFEENKEITSSMRERRSKGTASSSNFPASIFARSRTSF 17
+SMHFS DFEENKEITSSMR+RRS GTASSSNFPASI ARS TSF
Sbjct: 28687 TSMHFSLDFEENKEITSSMRDRRSNGTASSSNFPASILARSSTSF 28553
Score = 84.5 bits (178), Expect(3) = 8e-029
Identities = 42/76 (55%), Positives = 50/76 (65%)
Frame = +2 / +2
Query: 248 IHRTGSCICAGLFG**LKYGSRSGPKWSHEWERW*S*FNN*WCLQYSEWV*SSXXTK*LA 427
+HRTG CICA L G* LK GS S P W+HEWER S* +*W LQY EW S +*L
Sbjct: 29153 VHRTGPCICASLPG*ELKSGS*SSP*WNHEWERRQS*DYS*WRLQYFEWFSSRR*AQ*LG 29332
Query: 428 IFXDAPL**GVPFG*S 475
+F A +** P+G*+
Sbjct: 29333 LF*AAAI**RAPYG*A 29380
Score = 77.1 bits (162), Expect(3) = 2e-065
Identities = 29/39 (74%), Positives = 36/39 (92%)
Frame = +3 / +1
Query: 144 IELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVKFTER 260
++LAVFVCD+VPK V+GDPWR+RQILTNLVGNAVK + +
Sbjct: 28873 LQLAVFVCDDVPKVVIGDPWRYRQILTNLVGNAVKVSTK 28989
Score = 65.2 bits (136), Expect(3) = 1e-056
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -1 / -1
Query: 253 VNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTAS 149
+ LTA PTKFVSICR L GSP T+FGT SHTNTAS
Sbjct: 28982 LTLTAFPTKFVSICRYLHGSPITTFGTSSHTNTAS 28878
Score = 61.1 bits (127), Expect(3) = 4e-040
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +2 / +3
Query: 149 ACSICM*QCSEGCSWRSLEVSADTNKFGRQCSQ 247
ACS+CM* CS+ C WRS+E+S +T+KFG +CSQ
Sbjct: 28878 ACSVCM**CSKSCYWRSMEISTNTDKFGGKCSQ 28976
Score = 57.9 bits (120), Expect(3) = 4e-040
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +1 / +1
Query: 16 *MMSLIEQRLKLES*SLKRCLLTCVLSWMMLFPYFLQSHGRSAL 147
*MM LI RLK + SL++C LTC LSWMM PYFLQ+ RSAL
Sbjct: 28552 *MMYLIGLRLKQGNWSLRQCHLTCGLSWMM*SPYFLQNQERSAL 28683
Score = 57.0 bits (118), Expect(3) = 5e-040
Identities = 30/46 (65%), Positives = 32/46 (69%)
Frame = -3 / -1
Query: 149 LNALLP*L*RK*GNNIIHERTQVKRHRFKL*LSSFNLCSIKDIIXQ 12
LNALL * *RK*G++IIHER QVK H KL FNL IK II Q
Sbjct: 28685 LNALLS*F*RK*GDHIIHERPQVKWHCLKLQFPCFNLSPIKYIIYQ 28548
Score = 56.5 bits (117), Expect(3) = 2e-031
Identities = 28/44 (63%), Positives = 30/44 (68%)
Frame = -2 / -3
Query: 147 QCTSPVTLKKIRK*HHP*ENAGQKAPLQALTFQLQSLLDQGHHL 16
QCTS + LKKIR+ HHP*E AGQ A QA LQS DQ HHL
Sbjct: 28683 QCTSLLILKKIRRSHHP*ETAGQMALPQAPISLLQS*PDQVHHL 28552
Score = 54.7 bits (113), Expect(3) = 8e-029
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +2 / +2
Query: 17 K*CP*SSKD*SWKVRA*SGAF*PAFSHG*CYFLIFFKVTGEVH* 148
K*C *S D*S ++ A* A *PA SHG*C LIFFK+ EVH*
Sbjct: 28553 K*CT*SG*D*SREIGA*GSAI*PAVSHG*CDLLIFFKIKREVH* 28684
Score = 51.9 bits (107), Expect(3) = 5e-040
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = -3 / -3
Query: 248 FDCIADQIC*YLPKPPRISKNILRNIVTYKYCKL 147
FDCI+ QIC YL P IS N NI+TYK+CKL
Sbjct: 28977 FDCISHQICQYLSISPWISNNNFWNIITYKHCKL 28876
Score = 46.4 bits (95), Expect(3) = 8e-029
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1 / +2
Query: 148 SLQYLYVTMFRRMFLEILGGFGRY*QIWSAMQS 246
SLQ LYV MF+++ LEI G +Y*QIW MQS
Sbjct: 28877 SLQCLYVMMFQKLLLEIHGDIDKY*QIWWEMQS 28975
Score = 38.2 bits (77), Expect(3) = 2e-031
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = -2 / -2
Query: 249 I*LHCRPNLLVSAETSKDLQEHPSEHCHIQILQA 148
+*LH PNL V + S DLQ EH HIQ LQA
Sbjct: 28978 L*LHFPPNLSVFVDISMDLQ*QLLEHHHIQTLQA 28877
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 126 bits (269), Expect(3) = 7e-062
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = +3 / +1
Query: 246 KFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTNGAFNTLSGFEAAXXRNSW 425
+FTERGHVFVRVCLA+NS +EA QVLNG MNGKDG+V++T NGAFNTLSGF+AA RN+W
Sbjct: 6010573 QFTERGHVFVRVCLAENSKVEANQVLNGTMNGKDGKVETTANGAFNTLSGFQAADERNNW 6010752
Query: 426 QYFXM 440
YF +
Sbjct: 6010753 DYFKL 6010767
Score = 123 bits (264), Expect(3) = 3e-053
Identities = 53/95 (55%), Positives = 60/95 (63%)
Frame = -3 / -3
Query: 533 NTYRXCDXXXIXLIRXXXXKIIQKGLLIREEHXKILPTISSXCCFKPTQSIEGTISC*IN 354
NTY I LIR K+I GL IR + KI+P I+ C K TQSIEG ISC +N
Sbjct: 6010860 NTYHQGHTVTIILIRSVALKLIHMGLFIR*QQLKIIPVIALICGLKTTQSIEGAISCSLN 6010681
Query: 353 STIFPIHGSI*DLTGFHI*VISQTDPHKYMTPFCE 249
+FPIHGSI DL FH *V+SQ D HKYM PFCE
Sbjct: 6010680 FAVFPIHGSIKDLISFHF*VLSQADSHKYMAPFCE 6010576
Score = 114 bits (244), Expect(3) = 2e-036
Identities = 59/98 (60%), Positives = 64/98 (65%)
Frame = -1 / -1
Query: 541 VXXILIXSVTXXESX*SEXXXXRSSKRDSLSERSIXKYCQLFRXXAASNPLRVLKAPLVV 362
V ILI VT +S * + SS SLS+ S K QL R AA PL+VLKAPL V
Sbjct: 6010868 VSSILIIKVTQSQSF**DLSHSSSSIWGSLSDSSSLK*SQLLRSSAA*KPLKVLKAPLAV 6010689
Query: 361 ESTLPSFPFMAPFRT*PASIFELSAKQTRTNT*PRSVN 248
STLPSFPFM P RT* AS FE SA+QTRTNT PRSVN
Sbjct: 6010688 VSTLPSFPFMVPLRT*LASTFEFSARQTRTNTWPRSVN 6010575
Score = 105 bits (225), Expect(3) = 7e-062
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVF 161
L NDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIE++ F
Sbjct: 6009970 LINDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIEVSFF 6010119
Score = 105 bits (223), Expect(3) = 1e-036
Identities = 49/86 (56%), Positives = 54/86 (62%)
Frame = +1 / +2
Query: 247 NSQNGVMYLCGSVWLITQIWKPVRS*MEP*MGKMVELIQQLMVPSIL*VGLKQXXDEIVG 426
+SQNG MYLC S WL TQ WK ++S MEP*MGK +L QLM PSIL*V K I G
Sbjct: 6010574 SSQNGAMYLCESAWLRTQKWKLIKSLMEP*MGKTAKLRLQLMAPSIL*VVFKPQMSAITG 6010753
Query: 427 NIXXCSSLIRSPFWMILXXXILIKXI 504
I C LI+SP WM L LIK I
Sbjct: 6010754 IILSCCYLIKSPIWMSLSATDLIKMI 6010831
Score = 99.6 bits (211), Expect(3) = 7e-028
Identities = 50/95 (52%), Positives = 56/95 (58%)
Frame = -2 / -2
Query: 534 QYLSXV*XXXNXFDQNXXXQDHPKGTPYQRGASXNIANYFVXXLLQTHSEY*RHH*LLNQ 355
QYLS N FD+ Q HP G YQ A+ N +Y L+ HS+Y*R H*L +Q
Sbjct: 6010861 QYLSSRSHSHNHFDKICRTQAHPYGALYQIAAA*NNPSYCAHLRLENHSKY*RRH*L*SQ 6010682
Query: 354 LYHLSHSWLHLGPDRLPYLSYQPNRPAQIHDPVL* 250
L LSHSW H G D LP LS QP R AQIH PVL*
Sbjct: 6010681 LCRLSHSWFH*GLD*LPLLSSQPGRLAQIHGPVL* 6010577
Score = 90.9 bits (192), Expect(3) = 3e-053
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1 / -1
Query: 151 SSMHFSRDFEENKEITSSMRERRSKGTASSSNFPASIFARSRTSF 17
+SMHFS DFEENKEITSSMR+RRS GTASSSNFPASI ARS TSF
Sbjct: 6010109 TSMHFSLDFEENKEITSSMRDRRSNGTASSSNFPASILARSSTSF 6009975
Score = 84.5 bits (178), Expect(3) = 2e-025
Identities = 42/76 (55%), Positives = 50/76 (65%)
Frame = +2 / +3
Query: 248 IHRTGSCICAGLFG**LKYGSRSGPKWSHEWERW*S*FNN*WCLQYSEWV*SSXXTK*LA 427
+HRTG CICA L G* LK GS S P W+HEWER S* +*W LQY EW S +*L
Sbjct: 6010575 VHRTGPCICASLPG*ELKSGS*SSP*WNHEWERRQS*DYS*WRLQYFEWFSSRR*AQ*LG 6010754
Query: 428 IFXDAPL**GVPFG*S 475
+F A +** P+G*+
Sbjct: 6010755 LF*AAAI**RAPYG*A 6010802
Score = 77.1 bits (162), Expect(3) = 7e-062
Identities = 29/39 (74%), Positives = 36/39 (92%)
Frame = +3 / +2
Query: 144 IELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVKFTER 260
++LAVFVCD+VPK V+GDPWR+RQILTNLVGNAVK + +
Sbjct: 6010295 LQLAVFVCDDVPKVVIGDPWRYRQILTNLVGNAVKVSTK 6010411
Score = 65.2 bits (136), Expect(3) = 3e-053
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -1 / -3
Query: 253 VNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTAS 149
+ LTA PTKFVSICR L GSP T+FGT SHTNTAS
Sbjct: 6010404 LTLTAFPTKFVSICRYLHGSPITTFGTSSHTNTAS 6010300
Score = 61.1 bits (127), Expect(3) = 1e-036
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +2 / +1
Query: 149 ACSICM*QCSEGCSWRSLEVSADTNKFGRQCSQ 247
ACS+CM* CS+ C WRS+E+S +T+KFG +CSQ
Sbjct: 6010300 ACSVCM**CSKSCYWRSMEISTNTDKFGGKCSQ 6010398
Score = 57.9 bits (120), Expect(3) = 1e-036
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +1 / +2
Query: 16 *MMSLIEQRLKLES*SLKRCLLTCVLSWMMLFPYFLQSHGRSAL 147
*MM LI RLK + SL++C LTC LSWMM PYFLQ+ RSAL
Sbjct: 6009974 *MMYLIGLRLKQGNWSLRQCHLTCGLSWMM*SPYFLQNQERSAL 6010105
Score = 57.0 bits (118), Expect(3) = 2e-036
Identities = 30/46 (65%), Positives = 32/46 (69%)
Frame = -3 / -3
Query: 149 LNALLP*L*RK*GNNIIHERTQVKRHRFKL*LSSFNLCSIKDIIXQ 12
LNALL * *RK*G++IIHER QVK H KL FNL IK II Q
Sbjct: 6010107 LNALLS*F*RK*GDHIIHERPQVKWHCLKLQFPCFNLSPIKYIIYQ 6009970
Score = 56.5 bits (117), Expect(3) = 7e-028
Identities = 28/44 (63%), Positives = 30/44 (68%)
Frame = -2 / -2
Query: 147 QCTSPVTLKKIRK*HHP*ENAGQKAPLQALTFQLQSLLDQGHHL 16
QCTS + LKKIR+ HHP*E AGQ A QA LQS DQ HHL
Sbjct: 6010105 QCTSLLILKKIRRSHHP*ETAGQMALPQAPISLLQS*PDQVHHL 6009974
Score = 54.7 bits (113), Expect(3) = 2e-025
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +2 / +3
Query: 17 K*CP*SSKD*SWKVRA*SGAF*PAFSHG*CYFLIFFKVTGEVH* 148
K*C *S D*S ++ A* A *PA SHG*C LIFFK+ EVH*
Sbjct: 6009975 K*CT*SG*D*SREIGA*GSAI*PAVSHG*CDLLIFFKIKREVH* 6010106
Score = 51.9 bits (107), Expect(3) = 2e-036
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = -3 / -2
Query: 248 FDCIADQIC*YLPKPPRISKNILRNIVTYKYCKL 147
FDCI+ QIC YL P IS N NI+TYK+CKL
Sbjct: 6010399 FDCISHQICQYLSISPWISNNNFWNIITYKHCKL 6010298
Score = 46.4 bits (95), Expect(3) = 2e-025
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1 / +3
Query: 148 SLQYLYVTMFRRMFLEILGGFGRY*QIWSAMQS 246
SLQ LYV MF+++ LEI G +Y*QIW MQS
Sbjct: 6010299 SLQCLYVMMFQKLLLEIHGDIDKY*QIWWEMQS 6010397
Score = 38.2 bits (77), Expect(3) = 7e-028
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = -2 / -1
Query: 249 I*LHCRPNLLVSAETSKDLQEHPSEHCHIQILQA 148
+*LH PNL V + S DLQ EH HIQ LQA
Sbjct: 6010400 L*LHFPPNLSVFVDISMDLQ*QLLEHHHIQTLQA 6010299
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 126 bits (269), Expect(2) = 5e-048
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = +3 / +3
Query: 246 KFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTNGAFNTLSGFEAAXXRNSW 425
+FTERGHVFVRVCLA+NS +EA QVLNG MNGKDG+V++T NGAFNTLSGF+AA RN+W
Sbjct: 30845574 QFTERGHVFVRVCLAENSKVEANQVLNGTMNGKDGKVETTANGAFNTLSGFQAADERNNW 30845753
Query: 426 QYFXM 440
YF +
Sbjct: 30845754 DYFKL 30845768
Score = 123 bits (264), Expect = 1e-026
Identities = 53/95 (55%), Positives = 60/95 (63%)
Frame = -3 / -3
Query: 533 NTYRXCDXXXIXLIRXXXXKIIQKGLLIREEHXKILPTISSXCCFKPTQSIEGTISC*IN 354
NTY I LIR K+I GL IR + KI+P I+ C K TQSIEG ISC +N
Sbjct: 30845861 NTYHQGHTVTIILIRSVALKLIHMGLFIR*QQLKIIPVIALICGLKTTQSIEGAISCSLN 30845682
Query: 353 STIFPIHGSI*DLTGFHI*VISQTDPHKYMTPFCE 249
+FPIHGSI DL FH *V+SQ D HKYM PFCE
Sbjct: 30845681 FAVFPIHGSIKDLISFHF*VLSQADSHKYMAPFCE 30845577
Score = 114 bits (244), Expect = 6e-024
Identities = 59/98 (60%), Positives = 64/98 (65%)
Frame = -1 / -1
Query: 541 VXXILIXSVTXXESX*SEXXXXRSSKRDSLSERSIXKYCQLFRXXAASNPLRVLKAPLVV 362
V ILI VT +S * + SS SLS+ S K QL R AA PL+VLKAPL V
Sbjct: 30845869 VSSILIIKVTQSQSF**DLSHSSSSIWGSLSDSSSLK*SQLLRSSAA*KPLKVLKAPLAV 30845690
Query: 361 ESTLPSFPFMAPFRT*PASIFELSAKQTRTNT*PRSVN 248
STLPSFPFM P RT* AS FE SA+QTRTNT PRSVN
Sbjct: 30845689 VSTLPSFPFMVPLRT*LASTFEFSARQTRTNTWPRSVN 30845576
Score = 105 bits (225), Expect(2) = 5e-048
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = +3 / +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVF 161
L NDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIE++ F
Sbjct: 30844971 LINDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIEVSFF 30845120
Score = 105 bits (223), Expect = 5e-021
Identities = 49/86 (56%), Positives = 54/86 (62%)
Frame = +1 / +1
Query: 247 NSQNGVMYLCGSVWLITQIWKPVRS*MEP*MGKMVELIQQLMVPSIL*VGLKQXXDEIVG 426
+SQNG MYLC S WL TQ WK ++S MEP*MGK +L QLM PSIL*V K I G
Sbjct: 30845575 SSQNGAMYLCESAWLRTQKWKLIKSLMEP*MGKTAKLRLQLMAPSIL*VVFKPQMSAITG 30845754
Query: 427 NIXXCSSLIRSPFWMILXXXILIKXI 504
I C LI+SP WM L LIK I
Sbjct: 30845755 IILSCCYLIKSPIWMSLSATDLIKMI 30845832
>gb|AACV01005369.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005369,
whole genome shotgun sequence
Length = 6338
Score = 126 bits (269), Expect(3) = 5e-044
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = +3 / +2
Query: 246 KFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTNGAFNTLSGFEAAXXRNSW 425
+FTERGHVFVRVCLA+NS +EA QVLNG MNGKDG+V++T NGAFNTLSGF+AA RN+W
Sbjct: 491 QFTERGHVFVRVCLAENSKVEANQVLNGTMNGKDGKVETTANGAFNTLSGFQAADERNNW 670
Query: 426 QYFXM 440
YF +
Sbjct: 671 DYFKL 685
Score = 123 bits (264), Expect(2) = 7e-039
Identities = 53/95 (55%), Positives = 60/95 (63%)
Frame = -3 / -2
Query: 533 NTYRXCDXXXIXLIRXXXXKIIQKGLLIREEHXKILPTISSXCCFKPTQSIEGTISC*IN 354
NTY I LIR K+I GL IR + KI+P I+ C K TQSIEG ISC +N
Sbjct: 778 NTYHQGHTVTIILIRSVALKLIHMGLFIR*QQLKIIPVIALICGLKTTQSIEGAISCSLN 599
Query: 353 STIFPIHGSI*DLTGFHI*VISQTDPHKYMTPFCE 249
+FPIHGSI DL FH *V+SQ D HKYM PFCE
Sbjct: 598 FAVFPIHGSIKDLISFHF*VLSQADSHKYMAPFCE 494
Score = 114 bits (244), Expect(2) = 4e-032
Identities = 59/98 (60%), Positives = 64/98 (65%)
Frame = -1 / -3
Query: 541 VXXILIXSVTXXESX*SEXXXXRSSKRDSLSERSIXKYCQLFRXXAASNPLRVLKAPLVV 362
V ILI VT +S * + SS SLS+ S K QL R AA PL+VLKAPL V
Sbjct: 786 VSSILIIKVTQSQSF**DLSHSSSSIWGSLSDSSSLK*SQLLRSSAA*KPLKVLKAPLAV 607
Query: 361 ESTLPSFPFMAPFRT*PASIFELSAKQTRTNT*PRSVN 248
STLPSFPFM P RT* AS FE SA+QTRTNT PRSVN
Sbjct: 606 VSTLPSFPFMVPLRT*LASTFEFSARQTRTNTWPRSVN 493
Score = 105 bits (223), Expect(2) = 5e-032
Identities = 49/86 (56%), Positives = 54/86 (62%)
Frame = +1 / +3
Query: 247 NSQNGVMYLCGSVWLITQIWKPVRS*MEP*MGKMVELIQQLMVPSIL*VGLKQXXDEIVG 426
+SQNG MYLC S WL TQ WK ++S MEP*MGK +L QLM PSIL*V K I G
Sbjct: 492 SSQNGAMYLCESAWLRTQKWKLIKSLMEP*MGKTAKLRLQLMAPSIL*VVFKPQMSAITG 671
Query: 427 NIXXCSSLIRSPFWMILXXXILIKXI 504
I C LI+SP WM L LIK I
Sbjct: 672 IILSCCYLIKSPIWMSLSATDLIKMI 749
Score = 99.6 bits (211), Expect(2) = 1e-023
Identities = 50/95 (52%), Positives = 56/95 (58%)
Frame = -2 / -1
Query: 534 QYLSXV*XXXNXFDQNXXXQDHPKGTPYQRGASXNIANYFVXXLLQTHSEY*RHH*LLNQ 355
QYLS N FD+ Q HP G YQ A+ N +Y L+ HS+Y*R H*L +Q
Sbjct: 779 QYLSSRSHSHNHFDKICRTQAHPYGALYQIAAA*NNPSYCAHLRLENHSKY*RRH*L*SQ 600
Query: 354 LYHLSHSWLHLGPDRLPYLSYQPNRPAQIHDPVL* 250
L LSHSW H G D LP LS QP R AQIH PVL*
Sbjct: 599 LCRLSHSWFH*GLD*LPLLSSQPGRLAQIHGPVL* 495
Score = 84.5 bits (178), Expect(2) = 1e-021
Identities = 42/76 (55%), Positives = 50/76 (65%)
Frame = +2 / +1
Query: 248 IHRTGSCICAGLFG**LKYGSRSGPKWSHEWERW*S*FNN*WCLQYSEWV*SSXXTK*LA 427
+HRTG CICA L G* LK GS S P W+HEWER S* +*W LQY EW S +*L
Sbjct: 493 VHRTGPCICASLPG*ELKSGS*SSP*WNHEWERRQS*DYS*WRLQYFEWFSSRR*AQ*LG 672
Query: 428 IFXDAPL**GVPFG*S 475
+F A +** P+G*+
Sbjct: 673 LF*AAAI**RAPYG*A 720
Score = 77.1 bits (162), Expect(3) = 5e-044
Identities = 29/39 (74%), Positives = 36/39 (92%)
Frame = +3 / +3
Query: 144 IELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVKFTER 260
++LAVFVCD+VPK V+GDPWR+RQILTNLVGNAVK + +
Sbjct: 213 LQLAVFVCDDVPKVVIGDPWRYRQILTNLVGNAVKVSTK 329
Score = 65.2 bits (136), Expect(2) = 7e-039
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -1 / -2
Query: 253 VNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTAS 149
+ LTA PTKFVSICR L GSP T+FGT SHTNTAS
Sbjct: 322 LTLTAFPTKFVSICRYLHGSPITTFGTSSHTNTAS 218
Score = 61.1 bits (127), Expect(2) = 5e-032
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +2 / +2
Query: 149 ACSICM*QCSEGCSWRSLEVSADTNKFGRQCSQ 247
ACS+CM* CS+ C WRS+E+S +T+KFG +CSQ
Sbjct: 218 ACSVCM**CSKSCYWRSMEISTNTDKFGGKCSQ 316
Score = 51.9 bits (107), Expect(2) = 4e-032
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = -3 / -1
Query: 248 FDCIADQIC*YLPKPPRISKNILRNIVTYKYCKL 147
FDCI+ QIC YL P IS N NI+TYK+CKL
Sbjct: 317 FDCISHQICQYLSISPWISNNNFWNIITYKHCKL 216
Score = 46.4 bits (95), Expect(2) = 1e-021
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1 / +1
Query: 148 SLQYLYVTMFRRMFLEILGGFGRY*QIWSAMQS 246
SLQ LYV MF+++ LEI G +Y*QIW MQS
Sbjct: 217 SLQCLYVMMFQKLLLEIHGDIDKY*QIWWEMQS 315
Score = 38.2 bits (77), Expect(2) = 1e-023
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = -2 / -3
Query: 249 I*LHCRPNLLVSAETSKDLQEHPSEHCHIQILQA 148
+*LH PNL V + S DLQ EH HIQ LQA
Sbjct: 318 L*LHFPPNLSVFVDISMDLQ*QLLEHHHIQTLQA 217
Score = 24.9 bits (48), Expect(3) = 5e-044
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 126 KSREKCIELAVF 161
KSREKCIE++ F
Sbjct: 2 KSREKCIEVSSF 37
>ref|XM_469566.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3042
Score = 145 bits (312), Expect(2) = 3e-042
Identities = 61/81 (75%), Positives = 74/81 (91%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLDRAKIEAGK++LE+VPFDLRS++DDVISLFSSKSREK IELAV+V + VP+ +L
Sbjct: 1300 LINEVLDRAKIEAGKIDLESVPFDLRSILDDVISLFSSKSREKGIELAVYVSERVPEILL 1479
Query: 192 GDPWRFRQILTNLVGNAVKFT 254
GDP RFRQI+TNLVGN++K T
Sbjct: 1480 GDPGRFRQIITNLVGNSIKIT 1542
Score = 94.5 bits (200), Expect(3) = 2e-024
Identities = 48/78 (61%), Positives = 51/78 (65%)
Frame = -1 / -2
Query: 253 VNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRDFEENKEITSSMRERRSKG 74
V L PTKFV I RNL GSP GTLS T TASS+ FS DFEEN E+TSS + RS G
Sbjct: 1541 VILIEFPTKFVII*RNLPGSPNRISGTLSETYTASSIPFSLDFEENNEMTSSRMDLRSNG 1362
Query: 73 TASSSNFPASIFARSRTS 20
T S S PASI A S TS
Sbjct: 1361 TDSRSILPASILALSSTS 1308
Score = 50.1 bits (103), Expect(2) = 3e-042
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / +1
Query: 318 VLNGAMNGKDGRVDSTTNGAFNTLSGFEAAXXRNSWQYFXM 440
V+NG KD + T+G+ NTLSGFEAA RN+W+ F +
Sbjct: 1642 VVNGMNGHKDEAIAIPTSGSHNTLSGFEAADSRNNWENFKL 1764
Score = 34.5 bits (69), Expect(3) = 2e-024
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 448 ERSIXKYCQLFRXXAASNPLRVLKAPLV 365
E K+ QLFR AAS PL+VL PLV
Sbjct: 1772 ESKSLKFSQLFRLSAASKPLKVL*DPLV 1689
Score = 24.4 bits (47), Expect(3) = 2e-024
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 302 I*VISQTDPHKYMTPFCE 249
I*VI Q + +K + PFCE
Sbjct: 1614 I*VICQVNLYKNVPPFCE 1561
>dbj|AK121000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044K19, full
insert sequence
Length = 4802
Score = 151 bits (325), Expect(2) = 1e-036
Identities = 62/94 (65%), Positives = 79/94 (84%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD AKIE+GK+ELEAV FD+R ++D+V+SLFS KS K IELAV V D VP ++
Sbjct: 2545 LINEVLDLAKIESGKIELEAVRFDVRDILDNVVSLFSEKSWAKGIELAVLVSDQVPDVLI 2724
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLAD 293
GDPWRFRQI+TNLVGN++KFTE+GH+F+RV L +
Sbjct: 2725 GDPWRFRQIITNLVGNSMKFTEQGHIFIRVHLIE 2826
Score = 104 bits (222), Expect(2) = 1e-021
Identities = 52/96 (54%), Positives = 59/96 (61%)
Frame = -1 / -1
Query: 304 IFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRDF 125
+F S K TR *P SVN PT+FV ICRN GSP + GT S T+TA+SM + DF
Sbjct: 2837 LFTSSIKCTRMKI*PCSVNFIEFPTRFVMICRNRHGSPIRTSGT*SDTSTANSMPLAHDF 2658
Query: 124 EENKEITSSMRERRSKGTASSSNFPASIFARSRTSF 17
ENK+ T S R S TASSS P SI ARS TSF
Sbjct: 2657 SENKDTTLSRISRTSNRTASSSILPDSILARSSTSF 2550
Score = 25.4 bits (49), Expect(2) = 1e-036
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 378 FNTLSGFEAAXXRNSWQYFXM 440
+NTLSG E A R + + F M
Sbjct: 2911 YNTLSGLEVANNRKTLESFRM 2973
Score = 22.1 bits (42), Expect(2) = 1e-021
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3 / -3
Query: 443 EHXKILPTISSXCCFKPTQSI 381
EH + L C FKPT SI
Sbjct: 2976 EHPETLQGFPIICYFKPT*SI 2914
>ref|NM_196042.1| Oryza sativa (japonica cultivar-group) putative histidine kinase
(OSJNBa0073L01.1), mRNA
Length = 3161
Score = 151 bits (325), Expect(2) = 1e-036
Identities = 62/94 (65%), Positives = 79/94 (84%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD AKIE+GK+ELEAV FD+R ++D+V+SLFS KS K IELAV V D VP ++
Sbjct: 1159 LINEVLDLAKIESGKIELEAVRFDVRDILDNVVSLFSEKSWAKGIELAVLVSDQVPDVLI 1338
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRVCLAD 293
GDPWRFRQI+TNLVGN++KFTE+GH+F+RV L +
Sbjct: 1339 GDPWRFRQIITNLVGNSMKFTEQGHIFIRVHLIE 1440
Score = 104 bits (222), Expect(2) = 1e-021
Identities = 52/96 (54%), Positives = 59/96 (61%)
Frame = -1 / -1
Query: 304 IFELSAKQTRTNT*PRSVNLTALPTKFVSICRNLQGSPRTSFGTLSHTNTASSMHFSRDF 125
+F S K TR *P SVN PT+FV ICRN GSP + GT S T+TA+SM + DF
Sbjct: 1451 LFTSSIKCTRMKI*PCSVNFIEFPTRFVMICRNRHGSPIRTSGT*SDTSTANSMPLAHDF 1272
Query: 124 EENKEITSSMRERRSKGTASSSNFPASIFARSRTSF 17
ENK+ T S R S TASSS P SI ARS TSF
Sbjct: 1271 SENKDTTLSRISRTSNRTASSSILPDSILARSSTSF 1164
Score = 25.4 bits (49), Expect(2) = 1e-036
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 378 FNTLSGFEAAXXRNSWQYFXM 440
+NTLSG E A R + + F M
Sbjct: 1525 YNTLSGLEVANNRKTLESFRM 1587
Score = 22.1 bits (42), Expect(2) = 1e-021
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3 / -3
Query: 443 EHXKILPTISSXCCFKPTQSI 381
EH + L C FKPT SI
Sbjct: 1590 EHPETLQGFPIICYFKPT*SI 1528
>dbj|AK121135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077D19, full
insert sequence
Length = 4044
Score = 148 bits (317), Expect(2) = 2e-035
Identities = 58/90 (64%), Positives = 78/90 (86%)
Frame = +3 / +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE VPFDLR++ DD++SLF K++EK +ELAV+V D VP+ ++
Sbjct: 1875 LINEVLDQAKIESGKLELETVPFDLRTVCDDILSLFCGKAQEKGLELAVYVSDQVPQILI 2054
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R RQI+TNLVGN++KFTERGH+++ V
Sbjct: 2055 GDPGRIRQIITNLVGNSIKFTERGHIYLTV 2144
Score = 24.9 bits (48), Expect(2) = 2e-035
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / +3
Query: 381 NTLSGFEAAXXRNSWQ 428
NTLSG+ A R SW+
Sbjct: 2202 NTLSGYPVANRRCSWE 2249
>ref|XM_463649.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 3072
Score = 148 bits (317), Expect(2) = 2e-035
Identities = 58/90 (64%), Positives = 78/90 (86%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE VPFDLR++ DD++SLF K++EK +ELAV+V D VP+ ++
Sbjct: 1468 LINEVLDQAKIESGKLELETVPFDLRTVCDDILSLFCGKAQEKGLELAVYVSDQVPQILI 1647
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R RQI+TNLVGN++KFTERGH+++ V
Sbjct: 1648 GDPGRIRQIITNLVGNSIKFTERGHIYLTV 1737
Score = 24.9 bits (48), Expect(2) = 2e-035
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / +1
Query: 381 NTLSGFEAAXXRNSWQ 428
NTLSG+ A R SW+
Sbjct: 1795 NTLSGYPVANRRCSWE 1842
>dbj|AK067580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112K17, full
insert sequence
Length = 2629
Score = 148 bits (317), Expect(2) = 2e-035
Identities = 58/90 (64%), Positives = 78/90 (86%)
Frame = +3 / +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE VPFDLR++ DD++SLF K++EK +ELAV+V D VP+ ++
Sbjct: 456 LINEVLDQAKIESGKLELETVPFDLRTVCDDILSLFCGKAQEKGLELAVYVSDQVPQILI 635
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R RQI+TNLVGN++KFTERGH+++ V
Sbjct: 636 GDPGRIRQIITNLVGNSIKFTERGHIYLTV 725
Score = 24.9 bits (48), Expect(2) = 2e-035
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / +3
Query: 381 NTLSGFEAAXXRNSWQ 428
NTLSG+ A R SW+
Sbjct: 783 NTLSGYPVANRRCSWE 830
>gb|CB649579.1|CB649579 OSJNEb13J09.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13J09 5', mRNA sequence
Length = 802
Score = 148 bits (317), Expect(2) = 2e-035
Identities = 58/90 (64%), Positives = 78/90 (86%)
Frame = +3 / +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE VPFDLR++ DD++SLF K++EK +ELAV+V D VP+ ++
Sbjct: 150 LINEVLDQAKIESGKLELETVPFDLRTVCDDILSLFCGKAQEKGLELAVYVSDQVPQILI 329
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R RQI+TNLVGN++KFTERGH+++ V
Sbjct: 330 GDPGRIRQIITNLVGNSIKFTERGHIYLTV 419
Score = 24.9 bits (48), Expect(2) = 2e-035
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / +3
Query: 381 NTLSGFEAAXXRNSWQ 428
NTLSG+ A R SW+
Sbjct: 477 NTLSGYPVANRRCSWE 524
>gb|CF303918.1|CF303918 ABF1--03-J08.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--03-J08, mRNA sequence
Length = 582
Score = 148 bits (317), Expect(2) = 2e-035
Identities = 58/90 (64%), Positives = 78/90 (86%)
Frame = +3 / +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
L N+VLD+AKIE+GKLELE VPFDLR++ DD++SLF K++EK +ELAV+V D VP+ ++
Sbjct: 87 LINEVLDQAKIESGKLELETVPFDLRTVCDDILSLFCGKAQEKGLELAVYVSDQVPQILI 266
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
GDP R RQI+TNLVGN++KFTERGH+++ V
Sbjct: 267 GDPGRIRQIITNLVGNSIKFTERGHIYLTV 356
Score = 24.9 bits (48), Expect(2) = 2e-035
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / +3
Query: 381 NTLSGFEAAXXRNSWQ 428
NTLSG+ A R SW+
Sbjct: 414 NTLSGYPVANRRCSWE 461
>gb|AACV01007799.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007799, whole
genome shotgun sequence
Length = 57179
Score = 90.4 bits (191), Expect(3) = 2e-033
Identities = 38/48 (79%), Positives = 46/48 (95%)
Frame = +3 / +2
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELA 155
L N+VLDRAKIEAGK++LE+VPFDLRS++DDVISLFSSKSREK IE++
Sbjct: 52007 LINEVLDRAKIEAGKIDLESVPFDLRSILDDVISLFSSKSREKGIEVS 52150
Score = 57.9 bits (120), Expect(3) = 2e-033
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +3 / +3
Query: 147 ELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVK 248
+LAV+V + VP+ +LGDP RFRQI+TNLVGN++K
Sbjct: 52374 QLAVYVSERVPEILLGDPGRFRQIITNLVGNSIK 52475
Score = 50.1 bits (103), Expect(3) = 2e-033
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / +3
Query: 318 VLNGAMNGKDGRVDSTTNGAFNTLSGFEAAXXRNSWQYFXM 440
V+NG KD + T+G+ NTLSGFEAA RN+W+ F +
Sbjct: 52698 VVNGMNGHKDEAIAIPTSGSHNTLSGFEAADSRNNWENFKL 52820
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete
sequence
Length = 147344
Score = 90.4 bits (191), Expect(3) = 1e-032
Identities = 38/48 (79%), Positives = 46/48 (95%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELA 155
L N+VLDRAKIEAGK++LE+VPFDLRS++DDVISLFSSKSREK IE++
Sbjct: 66907 LINEVLDRAKIEAGKIDLESVPFDLRSILDDVISLFSSKSREKGIEVS 67050
Score = 57.9 bits (120), Expect(3) = 1e-032
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +3 / +1
Query: 147 ELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVK 248
+LAV+V + VP+ +LGDP RFRQI+TNLVGN++K
Sbjct: 67273 QLAVYVSERVPEILLGDPGRFRQIITNLVGNSIK 67374
Score = 50.1 bits (103), Expect(3) = 1e-032
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / +1
Query: 318 VLNGAMNGKDGRVDSTTNGAFNTLSGFEAAXXRNSWQYFXM 440
V+NG KD + T+G+ NTLSGFEAA RN+W+ F +
Sbjct: 67597 VVNGMNGHKDEAIAIPTSGSHNTLSGFEAADSRNNWENFKL 67719
>ref|NT_079916.2| Oryza sativa (japonica cultivar-group)
Length = 3914802
Score = 90.4 bits (191), Expect(3) = 8e-030
Identities = 38/48 (79%), Positives = 46/48 (95%)
Frame = +3 / +3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELA 155
L N+VLDRAKIEAGK++LE+VPFDLRS++DDVISLFSSKSREK IE++
Sbjct: 2064993 LINEVLDRAKIEAGKIDLESVPFDLRSILDDVISLFSSKSREKGIEVS 2065136
Score = 57.9 bits (120), Expect(3) = 8e-030
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +3 / +3
Query: 147 ELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVK 248
+LAV+V + VP+ +LGDP RFRQI+TNLVGN++K
Sbjct: 2065359 QLAVYVSERVPEILLGDPGRFRQIITNLVGNSIK 2065460
Score = 50.1 bits (103), Expect(3) = 8e-030
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / +3
Query: 318 VLNGAMNGKDGRVDSTTNGAFNTLSGFEAAXXRNSWQYFXM 440
V+NG KD + T+G+ NTLSGFEAA RN+W+ F +
Sbjct: 2065683 VVNGMNGHKDEAIAIPTSGSHNTLSGFEAADSRNNWENFKL 2065805
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 90.4 bits (191), Expect(3) = 5e-029
Identities = 38/48 (79%), Positives = 46/48 (95%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELA 155
L N+VLDRAKIEAGK++LE+VPFDLRS++DDVISLFSSKSREK IE++
Sbjct: 2549788 LINEVLDRAKIEAGKIDLESVPFDLRSILDDVISLFSSKSREKGIEVS 2549931
Score = 57.9 bits (120), Expect(3) = 5e-029
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +3 / +2
Query: 147 ELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVK 248
+LAV+V + VP+ +LGDP RFRQI+TNLVGN++K
Sbjct: 2550155 QLAVYVSERVPEILLGDPGRFRQIITNLVGNSIK 2550256
Score = 50.1 bits (103), Expect(3) = 5e-029
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / +2
Query: 318 VLNGAMNGKDGRVDSTTNGAFNTLSGFEAAXXRNSWQYFXM 440
V+NG KD + T+G+ NTLSGFEAA RN+W+ F +
Sbjct: 2550479 VVNGMNGHKDEAIAIPTSGSHNTLSGFEAADSRNNWENFKL 2550601
>ref|NT_079923.2| Oryza sativa (japonica cultivar-group)
Length = 2970704
Score = 75.8 bits (159), Expect(4) = 2e-027
Identities = 30/47 (63%), Positives = 41/47 (87%)
Frame = +3 / -3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIEL 152
L N+VLD+AKIE+GKLELE VPFDLR++ DD++SLF K++EK +E+
Sbjct: 108144 LINEVLDQAKIESGKLELETVPFDLRTVCDDILSLFCGKAQEKGLEV 108004
Score = 56.1 bits (116), Expect(4) = 2e-027
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +3 / -2
Query: 147 ELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVK 248
+LAV+V D VP+ ++GDP R RQI+TNLVGN++K
Sbjct: 107899 QLAVYVSDQVPQILIGDPGRIRQIITNLVGNSIK 107798
Score = 24.9 bits (48), Expect(4) = 2e-027
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / -3
Query: 381 NTLSGFEAAXXRNSWQ 428
NTLSG+ A R SW+
Sbjct: 107619 NTLSGYPVANRRCSWE 107572
Score = 24.0 bits (46), Expect(4) = 2e-027
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +3 / -3
Query: 246 KFTERGHVFVRV 281
+FTERGH+++ V
Sbjct: 107712 QFTERGHIYLTV 107677
>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0592G05
Length = 146220
Score = 75.8 bits (159), Expect(4) = 2e-027
Identities = 30/47 (63%), Positives = 41/47 (87%)
Frame = +3 / -1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIEL 152
L N+VLD+AKIE+GKLELE VPFDLR++ DD++SLF K++EK +E+
Sbjct: 50421 LINEVLDQAKIESGKLELETVPFDLRTVCDDILSLFCGKAQEKGLEV 50281
Score = 56.1 bits (116), Expect(4) = 2e-027
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +3 / -3
Query: 147 ELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVK 248
+LAV+V D VP+ ++GDP R RQI+TNLVGN++K
Sbjct: 50176 QLAVYVSDQVPQILIGDPGRIRQIITNLVGNSIK 50075
Score = 24.9 bits (48), Expect(4) = 2e-027
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / -1
Query: 381 NTLSGFEAAXXRNSWQ 428
NTLSG+ A R SW+
Sbjct: 49896 NTLSGYPVANRRCSWE 49849
Score = 24.0 bits (46), Expect(4) = 2e-027
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +3 / -1
Query: 246 KFTERGHVFVRV 281
+FTERGH+++ V
Sbjct: 49989 QFTERGHIYLTV 49954
>dbj|AP006167.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1455F06
Length = 140848
Score = 75.8 bits (159), Expect(4) = 2e-027
Identities = 30/47 (63%), Positives = 41/47 (87%)
Frame = +3 / -2
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIEL 152
L N+VLD+AKIE+GKLELE VPFDLR++ DD++SLF K++EK +E+
Sbjct: 108144 LINEVLDQAKIESGKLELETVPFDLRTVCDDILSLFCGKAQEKGLEV 108004
Score = 56.1 bits (116), Expect(4) = 2e-027
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +3 / -1
Query: 147 ELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVK 248
+LAV+V D VP+ ++GDP R RQI+TNLVGN++K
Sbjct: 107899 QLAVYVSDQVPQILIGDPGRIRQIITNLVGNSIK 107798
Score = 24.9 bits (48), Expect(4) = 2e-027
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / -2
Query: 381 NTLSGFEAAXXRNSWQ 428
NTLSG+ A R SW+
Sbjct: 107619 NTLSGYPVANRRCSWE 107572
Score = 24.0 bits (46), Expect(4) = 2e-027
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +3 / -2
Query: 246 KFTERGHVFVRV 281
+FTERGH+++ V
Sbjct: 107712 QFTERGHIYLTV 107677
>gb|AACV01002960.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002960, whole
genome shotgun sequence
Length = 37306
Score = 75.8 bits (159), Expect(4) = 2e-027
Identities = 30/47 (63%), Positives = 41/47 (87%)
Frame = +3 / +1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIEL 152
L N+VLD+AKIE+GKLELE VPFDLR++ DD++SLF K++EK +E+
Sbjct: 15103 LINEVLDQAKIESGKLELETVPFDLRTVCDDILSLFCGKAQEKGLEV 15243
Score = 56.1 bits (116), Expect(4) = 2e-027
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +3 / +3
Query: 147 ELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVK 248
+LAV+V D VP+ ++GDP R RQI+TNLVGN++K
Sbjct: 15348 QLAVYVSDQVPQILIGDPGRIRQIITNLVGNSIK 15449
Score = 24.9 bits (48), Expect(4) = 2e-027
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / +1
Query: 381 NTLSGFEAAXXRNSWQ 428
NTLSG+ A R SW+
Sbjct: 15628 NTLSGYPVANRRCSWE 15675
Score = 24.0 bits (46), Expect(4) = 2e-027
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 246 KFTERGHVFVRV 281
+FTERGH+++ V
Sbjct: 15535 QFTERGHIYLTV 15570
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 126 bits (269), Expect = 2e-027
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = +3 / +3
Query: 246 KFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTNGAFNTLSGFEAAXXRNSW 425
+FTERGHVFVRVCLA+NS +EA QVLNG MNGKDG+V++T NGAFNTLSGF+AA RN+W
Sbjct: 17339652 QFTERGHVFVRVCLAENSKVEANQVLNGTMNGKDGKVETTANGAFNTLSGFQAADERNNW 17339831
Query: 426 QYFXM 440
YF +
Sbjct: 17339832 DYFKL 17339846
Score = 123 bits (264), Expect = 1e-026
Identities = 53/95 (55%), Positives = 60/95 (63%)
Frame = -3 / -3
Query: 533 NTYRXCDXXXIXLIRXXXXKIIQKGLLIREEHXKILPTISSXCCFKPTQSIEGTISC*IN 354
NTY I LIR K+I GL IR + KI+P I+ C K TQSIEG ISC +N
Sbjct: 17339939 NTYHQGHTVTIILIRSVALKLIHMGLFIR*QQLKIIPVIALICGLKTTQSIEGAISCSLN 17339760
Query: 353 STIFPIHGSI*DLTGFHI*VISQTDPHKYMTPFCE 249
+FPIHGSI DL FH *V+SQ D HKYM PFCE
Sbjct: 17339759 FAVFPIHGSIKDLISFHF*VLSQADSHKYMAPFCE 17339655
Score = 114 bits (244), Expect = 6e-024
Identities = 59/98 (60%), Positives = 64/98 (65%)
Frame = -1 / -1
Query: 541 VXXILIXSVTXXESX*SEXXXXRSSKRDSLSERSIXKYCQLFRXXAASNPLRVLKAPLVV 362
V ILI VT +S * + SS SLS+ S K QL R AA PL+VLKAPL V
Sbjct: 17339947 VSSILIIKVTQSQSF**DLSHSSSSIWGSLSDSSSLK*SQLLRSSAA*KPLKVLKAPLAV 17339768
Query: 361 ESTLPSFPFMAPFRT*PASIFELSAKQTRTNT*PRSVN 248
STLPSFPFM P RT* AS FE SA+QTRTNT PRSVN
Sbjct: 17339767 VSTLPSFPFMVPLRT*LASTFEFSARQTRTNTWPRSVN 17339654
Score = 105 bits (223), Expect = 5e-021
Identities = 49/86 (56%), Positives = 54/86 (62%)
Frame = +1 / +1
Query: 247 NSQNGVMYLCGSVWLITQIWKPVRS*MEP*MGKMVELIQQLMVPSIL*VGLKQXXDEIVG 426
+SQNG MYLC S WL TQ WK ++S MEP*MGK +L QLM PSIL*V K I G
Sbjct: 17339653 SSQNGAMYLCESAWLRTQKWKLIKSLMEP*MGKTAKLRLQLMAPSIL*VVFKPQMSAITG 17339832
Query: 427 NIXXCSSLIRSPFWMILXXXILIKXI 504
I C LI+SP WM L LIK I
Sbjct: 17339833 IILSCCYLIKSPIWMSLSATDLIKMI 17339910
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 126 bits (269), Expect = 2e-027
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = +3 / +2
Query: 246 KFTERGHVFVRVCLADNSNMEAGQVLNGAMNGKDGRVDSTTNGAFNTLSGFEAAXXRNSW 425
+FTERGHVFVRVCLA+NS +EA QVLNG MNGKDG+V++T NGAFNTLSGF+AA RN+W
Sbjct: 30792716 QFTERGHVFVRVCLAENSKVEANQVLNGTMNGKDGKVETTANGAFNTLSGFQAADERNNW 30792895
Query: 426 QYFXM 440
YF +
Sbjct: 30792896 DYFKL 30792910
Score = 123 bits (264), Expect = 1e-026
Identities = 53/95 (55%), Positives = 60/95 (63%)
Frame = -3 / -3
Query: 533 NTYRXCDXXXIXLIRXXXXKIIQKGLLIREEHXKILPTISSXCCFKPTQSIEGTISC*IN 354
NTY I LIR K+I GL IR + KI+P I+ C K TQSIEG ISC +N
Sbjct: 30793003 NTYHQGHTVTIILIRSVALKLIHMGLFIR*QQLKIIPVIALICGLKTTQSIEGAISCSLN 30792824
Query: 353 STIFPIHGSI*DLTGFHI*VISQTDPHKYMTPFCE 249
+FPIHGSI DL FH *V+SQ D HKYM PFCE
Sbjct: 30792823 FAVFPIHGSIKDLISFHF*VLSQADSHKYMAPFCE 30792719
Score = 114 bits (244), Expect = 6e-024
Identities = 59/98 (60%), Positives = 64/98 (65%)
Frame = -1 / -1
Query: 541 VXXILIXSVTXXESX*SEXXXXRSSKRDSLSERSIXKYCQLFRXXAASNPLRVLKAPLVV 362
V ILI VT +S * + SS SLS+ S K QL R AA PL+VLKAPL V
Sbjct: 30793011 VSSILIIKVTQSQSF**DLSHSSSSIWGSLSDSSSLK*SQLLRSSAA*KPLKVLKAPLAV 30792832
Query: 361 ESTLPSFPFMAPFRT*PASIFELSAKQTRTNT*PRSVN 248
STLPSFPFM P RT* AS FE SA+QTRTNT PRSVN
Sbjct: 30792831 VSTLPSFPFMVPLRT*LASTFEFSARQTRTNTWPRSVN 30792718
Score = 105 bits (223), Expect = 5e-021
Identities = 49/86 (56%), Positives = 54/86 (62%)
Frame = +1 / +3
Query: 247 NSQNGVMYLCGSVWLITQIWKPVRS*MEP*MGKMVELIQQLMVPSIL*VGLKQXXDEIVG 426
+SQNG MYLC S WL TQ WK ++S MEP*MGK +L QLM PSIL*V K I G
Sbjct: 30792717 SSQNGAMYLCESAWLRTQKWKLIKSLMEP*MGKTAKLRLQLMAPSIL*VVFKPQMSAITG 30792896
Query: 427 NIXXCSSLIRSPFWMILXXXILIKXI 504
I C LI+SP WM L LIK I
Sbjct: 30792897 IILSCCYLIKSPIWMSLSATDLIKMI 30792974
>gb|CF304999.1|CF304999 ABF1--06-I06.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--06-I06, mRNA sequence
Length = 611
Score = 116 bits (248), Expect(2) = 5e-026
Identities = 44/72 (61%), Positives = 61/72 (84%)
Frame = +3 / +2
Query: 66 EAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVLGDPWRFRQILTNLVGNAV 245
E VPFDLR++ DD++SLF K++EK +ELAV+V D VP+ ++GDP R RQI+TNLVGN++
Sbjct: 8 ETVPFDLRTVCDDILSLFCGKAQEKGLELAVYVSDQVPQILIGDPGRIRQIITNLVGNSI 187
Query: 246 KFTERGHVFVRV 281
KFTERGH+++ V
Sbjct: 188 KFTERGHIYLTV 223
Score = 24.9 bits (48), Expect(2) = 5e-026
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / +2
Query: 381 NTLSGFEAAXXRNSWQ 428
NTLSG+ A R SW+
Sbjct: 281 NTLSGYPVANRRCSWE 328
>gb|CH401253.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000090 genomic
scaffold, whole genome shotgun sequence
Length = 2475376
Score = 70.3 bits (147), Expect(2) = 1e-023
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = +3 / -3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELA 155
L N+VLD AKIE+GK+ELEAV FD+R ++D+V+SLFS KS K IE++
Sbjct: 1498910 LINEVLDLAKIESGKIELEAVRFDVRDILDNVVSLFSEKSWAKGIEVS 1498767
Score = 62.9 bits (131), Expect(2) = 1e-023
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3 / -3
Query: 150 LAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQ 317
LAV V D VP ++GDPWRFRQI+TNLVGN++K + + + + L N + +G+
Sbjct: 1498685 LAVLVSDQVPDVLIGDPWRFRQIITNLVGNSMKVSFKSRLATIIPLIFNLLLYSGE 1498518
>ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 2206062
Score = 70.3 bits (147), Expect(2) = 1e-023
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = +3 / -3
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELA 155
L N+VLD AKIE+GK+ELEAV FD+R ++D+V+SLFS KS K IE++
Sbjct: 1314514 LINEVLDLAKIESGKIELEAVRFDVRDILDNVVSLFSEKSWAKGIEVS 1314371
Score = 62.9 bits (131), Expect(2) = 1e-023
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3 / -3
Query: 150 LAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQ 317
LAV V D VP ++GDPWRFRQI+TNLVGN++K + + + + L N + +G+
Sbjct: 1314289 LAVLVSDQVPDVLIGDPWRFRQIITNLVGNSMKVSFKSRLATIIPLIFNLLLYSGE 1314122
>gb|AC092548.10| Oryza sativa chromosome 10 BAC OSJNBa0073L01 genomic sequence, complete
sequence
Length = 179199
Score = 70.3 bits (147), Expect(2) = 1e-023
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = +3 / -2
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELA 155
L N+VLD AKIE+GK+ELEAV FD+R ++D+V+SLFS KS K IE++
Sbjct: 11786 LINEVLDLAKIESGKIELEAVRFDVRDILDNVVSLFSEKSWAKGIEVS 11643
Score = 62.9 bits (131), Expect(2) = 1e-023
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3 / -2
Query: 150 LAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQ 317
LAV V D VP ++GDPWRFRQI+TNLVGN++K + + + + L N + +G+
Sbjct: 11561 LAVLVSDQVPDVLIGDPWRFRQIITNLVGNSMKVSFKSRLATIIPLIFNLLLYSGE 11394
>gb|AACV01021333.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021333, whole
genome shotgun sequence
Length = 43761
Score = 70.3 bits (147), Expect(2) = 1e-023
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = +3 / -1
Query: 12 LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELA 155
L N+VLD AKIE+GK+ELEAV FD+R ++D+V+SLFS KS K IE++
Sbjct: 22236 LINEVLDLAKIESGKIELEAVRFDVRDILDNVVSLFSEKSWAKGIEVS 22093
Score = 62.9 bits (131), Expect(2) = 1e-023
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3 / -1
Query: 150 LAVFVCDNVPKDVLGDPWRFRQILTNLVGNAVKFTERGHVFVRVCLADNSNMEAGQ 317
LAV V D VP ++GDPWRFRQI+TNLVGN++K + + + + L N + +G+
Sbjct: 22011 LAVLVSDQVPDVLIGDPWRFRQIITNLVGNSMKVSFKSRLATIIPLIFNLLLYSGE 21844
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,081,439,265
Number of Sequences: 438736
Number of extensions: 44681752
Number of successful extensions: 188128
Number of sequences better than 1.0e-020: 35
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 109871220657
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)