TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAZ1h07.yg.2.1
(357 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA... 164 4e-039
dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA... 164 4e-039
ref|NM_197700.1| Oryza sativa (japonica cultivar-group) bet... 164 4e-039
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 117 9e-034
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 117 9e-034
gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I1... 117 1e-033
gb|AACV01022091.1| Oryza sativa (japonica cultivar-group) c... 117 1e-033
dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA... 117 1e-033
dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA... 117 1e-033
dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA... 117 1e-033
dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA... 117 1e-033
ref|NM_197698.1| Oryza sativa (japonica cultivar-group) bet... 117 1e-033
gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11... 107 1e-032
dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA... 114 1e-032
ref|NM_197699.1| Oryza sativa (japonica cultivar-group) bet... 112 1e-031
dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA... 112 1e-031
dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA... 112 1e-031
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 111 2e-031
gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequ... 111 2e-031
gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbar... 111 2e-031
dbj|AK070972.1| Oryza sativa (japonica cultivar-group) cDNA... 111 2e-031
dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA... 109 1e-030
dbj|AK070187.1| Oryza sativa (japonica cultivar-group) cDNA... 95 2e-030
gb|AU198282.1|AU198282 AU198282 Rice green shoot Oryza sati... 112 2e-030
gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15... 95 3e-030
gb|AACV01022050.1| Oryza sativa (japonica cultivar-group) c... 95 3e-030
ref|NM_197637.1| Oryza sativa (japonica cultivar-group) bet... 95 3e-030
dbj|AK099112.1| Oryza sativa (japonica cultivar-group) cDNA... 95 3e-030
dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA... 102 6e-029
dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA... 102 8e-029
dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA... 102 8e-029
ref|NM_197701.1| Oryza sativa (japonica cultivar-group) bet... 102 8e-029
dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA... 102 8e-029
dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA... 100 2e-028
gb|AU094059.1|AU094059 AU094059 Rice panicle at flowering s... 95 4e-027
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 83 4e-027
gb|AC107224.2| Oryza sativa (japonica cultivar-group) chrom... 83 5e-027
gb|AACV01005738.1| Oryza sativa (japonica cultivar-group) c... 83 5e-027
dbj|AK069853.1| Oryza sativa (japonica cultivar-group) cDNA... 83 5e-027
ref|NM_187642.1| Oryza sativa (japonica cultivar-group), p... 83 5e-027
gb|AACV01005724.1| Oryza sativa (japonica cultivar-group) c... 61 3e-026
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 117 5e-025
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 117 5e-025
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 117 5e-025
gb|C27175.1|C27175 C27175 Rice callus cDNA Oryza sativa (ja... 101 1e-024
gb|BP184832.1|BP184832 BP184832 pNS rice panicle cDNA, flow... 76 1e-024
gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbar... 61 2e-024
gb|AACV01005740.1| Oryza sativa (japonica cultivar-group) c... 76 2e-024
dbj|AK072792.1| Oryza sativa (japonica cultivar-group) cDNA... 76 2e-024
ref|NM_187639.1| Oryza sativa (japonica cultivar-group), p... 76 2e-024
ref|NM_187643.1| Oryza sativa (japonica cultivar-group), p... 76 2e-024
dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA... 55 3e-024
gb|CH401229.1| Oryza sativa (japonica cultivar-group) chrom... 105 6e-024
dbj|AP003875.3| Oryza sativa (japonica cultivar-group) geno... 105 6e-024
gb|AACV01017536.1| Oryza sativa (japonica cultivar-group) c... 105 6e-024
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 111 4e-023
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 111 4e-023
gb|AU184077.1|AU184077 AU184077 Rice root Oryza sativa (jap... 102 6e-023
gb|AACV01022092.1| Oryza sativa (japonica cultivar-group) c... 55 8e-023
dbj|AK101313.1| Oryza sativa (japonica cultivar-group) cDNA... 92 8e-023
gb|AACV01005739.1| Oryza sativa (japonica cultivar-group) c... 76 2e-022
gb|CD670606.1|CD670606 OsMR021 5MT resistant rice mutant cD... 108 3e-022
gb|AU182569.1|AU182569 AU182569 Rice panicle at flowering s... 66 6e-022
gb|AU030829.1|AU030829 AU030829 Rice cDNA from immature lea... 89 6e-022
dbj|AK059638.1| Oryza sativa (japonica cultivar-group) cDNA... 97 2e-021
ref|XM_467145.1| Oryza sativa (japonica cultivar-group), mRNA 97 2e-021
gb|AU161321.1|AU161321 AU161321 Rice callus Oryza sativa (j... 76 2e-021
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 105 2e-021
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 105 2e-021
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 105 2e-021
ref|XM_473433.1| Oryza sativa (japonica cultivar-group), p... 90 3e-021
>dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O05, full
insert sequence
Length = 1313
Score = 164 bits (352), Expect = 4e-039
Identities = 69/118 (58%), Positives = 77/118 (65%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PV+KYHFDLSGTAFG +P +L AGIIDIQF+R C G VT +E GSNP Y
Sbjct: 475 PVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSNPVY 654
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
AVLVE+E DGDV QVD+ EANS W PMR SWG WR+DS L SLR ES
Sbjct: 655 FAVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWRLDSNHRLTAPFSLRITNES 828
Score = 123 bits (264), Expect = 6e-027
Identities = 60/118 (50%), Positives = 63/118 (53%)
Frame = -2 / -1
Query: 356 DSXXMRSXXXXCXXRLESILQXXPHDXRIGIHHPELASXMSTXXXXXXXXXXXXXTAK*X 177
DS MRS LES LQ PHD RIG+H ELAS ST TAK
Sbjct: 827 DSLVMRSEKGAVRRWLESSLQMEPHDSRIGVHDWELASMRSTCTTSPSPSSYSTSTAKYT 648
Query: 176 GFEPCSMXKVTXCPXXMQXXLLNWMSMMPAXXSSXXXXGCXMPPNAVPLRSKWYLATG 3
GF+P S VT P + LLNWMSMMPA S G M PNAVPLRSKWYL TG
Sbjct: 647 GFDPSSTWNVTFSPGKLHGTLLNWMSMMPAWRSWSFCPGLAMAPNAVPLRSKWYLETG 474
>dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F11, full
insert sequence
Length = 1031
Score = 164 bits (352), Expect = 4e-039
Identities = 69/118 (58%), Positives = 77/118 (65%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PV+KYHFDLSGTAFG +P +L AGIIDIQF+R C G VT +E GSNP Y
Sbjct: 219 PVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSNPVY 398
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
AVLVE+E DGDV QVD+ EANS W PMR SWG WR+DS L SLR ES
Sbjct: 399 FAVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWRLDSNHRLTAPFSLRITNES 572
Score = 123 bits (264), Expect = 6e-027
Identities = 60/118 (50%), Positives = 63/118 (53%)
Frame = -2 / -2
Query: 356 DSXXMRSXXXXCXXRLESILQXXPHDXRIGIHHPELASXMSTXXXXXXXXXXXXXTAK*X 177
DS MRS LES LQ PHD RIG+H ELAS ST TAK
Sbjct: 571 DSLVMRSEKGAVRRWLESSLQMEPHDSRIGVHDWELASMRSTCTTSPSPSSYSTSTAKYT 392
Query: 176 GFEPCSMXKVTXCPXXMQXXLLNWMSMMPAXXSSXXXXGCXMPPNAVPLRSKWYLATG 3
GF+P S VT P + LLNWMSMMPA S G M PNAVPLRSKWYL TG
Sbjct: 391 GFDPSSTWNVTFSPGKLHGTLLNWMSMMPAWRSWSFCPGLAMAPNAVPLRSKWYLETG 218
>ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB3
(OSJNBb0014I11.1), mRNA
Length = 904
Score = 164 bits (352), Expect = 4e-039
Identities = 69/118 (58%), Positives = 77/118 (65%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PV+KYHFDLSGTAFG +P +L AGIIDIQF+R C G VT +E GSNP Y
Sbjct: 464 PVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSNPVY 643
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
AVLVE+E DGDV QVD+ EANS W PMR SWG WR+DS L SLR ES
Sbjct: 644 FAVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWRLDSNHRLTAPFSLRITNES 817
Score = 123 bits (264), Expect = 6e-027
Identities = 60/118 (50%), Positives = 63/118 (53%)
Frame = -2 / -2
Query: 356 DSXXMRSXXXXCXXRLESILQXXPHDXRIGIHHPELASXMSTXXXXXXXXXXXXXTAK*X 177
DS MRS LES LQ PHD RIG+H ELAS ST TAK
Sbjct: 816 DSLVMRSEKGAVRRWLESSLQMEPHDSRIGVHDWELASMRSTCTTSPSPSSYSTSTAKYT 637
Query: 176 GFEPCSMXKVTXCPXXMQXXLLNWMSMMPAXXSSXXXXGCXMPPNAVPLRSKWYLATG 3
GF+P S VT P + LLNWMSMMPA S G M PNAVPLRSKWYL TG
Sbjct: 636 GFDPSSTWNVTFSPGKLHGTLLNWMSMMPAWRSWSFCPGLAMAPNAVPLRSKWYLETG 463
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 117 bits (250), Expect(2) = 9e-034
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1 / -2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L +GIIDIQFRR C G + +E GSNP Y
Sbjct: 9287109 PVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVY 9286930
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGW 261
AVLVE+E DGDV QVD+ E+ S +
Sbjct: 9286929 FAVLVEYEDLDGDVVQVDLMESKSAY 9286852
Score = 112 bits (240), Expect(2) = 1e-031
Identities = 48/82 (58%), Positives = 55/82 (67%)
Frame = +1 / -2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L AGIIDIQFRR C G V +E GSNP Y
Sbjct: 9292968 PVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVY 9292789
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
LAVLVEF DG V Q+D+ E+
Sbjct: 9292788 LAVLVEFANKDGTVVQLDVMES 9292723
Score = 107 bits (228), Expect(2) = 8e-031
Identities = 46/89 (51%), Positives = 53/89 (59%)
Frame = +1 / -3
Query: 91 GIIDIQFRRXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
G++ + R C G VT +E GSNP Y AVLVE+E DGDV QVD+ EANS W P
Sbjct: 9304754 GLLGVWPCRVPCNFPGLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDLMEANSQSWTP 9304575
Query: 271 MRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
MR SWG WR+DS L SLR ES
Sbjct: 9304574 MRESWGSIWRLDSNHRLTAPFSLRITNES 9304488
Score = 95.0 bits (201), Expect(2) = 2e-030
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +1 / +3
Query: 136 GQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKR 315
GQ VT +E GSNP YLAVLV+F DGDV Q+D+ EA W PM+ SWG WRMD+
Sbjct: 8898972 GQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTAT 8899151
Query: 316 XLQXXXSLRXXXES 357
L+ S+R ES
Sbjct: 8899152 PLKAPFSIRVTTES 8899193
Score = 63.4 bits (132), Expect(2) = 8e-031
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1 / -3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRR 117
PV+KYHFDLSGTAFG +P +L AGIIDIQF+R
Sbjct: 9305186 PVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKR 9305073
Score = 59.7 bits (124), Expect(2) = 2e-030
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXG 138
P++ YHFD SG AFG P EL AGIID+QFRR C G
Sbjct: 8898837 PISAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPG 8898971
Score = 48.7 bits (100), Expect(2) = 9e-034
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / -2
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+DS LQ SLR +S
Sbjct: 9286842 TGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDS 9286738
Score = 46.4 bits (95), Expect(2) = 1e-031
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1 / -2
Query: 262 WMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
W PMR SWG WR+D+ LQ SLR ES
Sbjct: 9292695 WTPMRRSWGSIWRLDANHRLQGPFSLRMVSES 9292600
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 117 bits (250), Expect(2) = 9e-034
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L +GIIDIQFRR C G + +E GSNP Y
Sbjct: 3233950 PVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVY 3233771
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGW 261
AVLVE+E DGDV QVD+ E+ S +
Sbjct: 3233770 FAVLVEYEDLDGDVVQVDLMESKSAY 3233693
Score = 112 bits (240), Expect(2) = 1e-031
Identities = 48/82 (58%), Positives = 55/82 (67%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L AGIIDIQFRR C G V +E GSNP Y
Sbjct: 3239809 PVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVY 3239630
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
LAVLVEF DG V Q+D+ E+
Sbjct: 3239629 LAVLVEFANKDGTVVQLDVMES 3239564
Score = 107 bits (228), Expect(2) = 3e-031
Identities = 46/89 (51%), Positives = 53/89 (59%)
Frame = +1 / -2
Query: 91 GIIDIQFRRXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
G++ + R C G VT +E GSNP Y AVLVE+E DGDV QVD+ EANS W P
Sbjct: 3251595 GLLGVWPCRVPCNFPGLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDLMEANSQSWTP 3251416
Query: 271 MRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
MR SWG WR+DS L SLR ES
Sbjct: 3251415 MRESWGSIWRLDSNHRLTAPFSLRITNES 3251329
Score = 95.0 bits (201), Expect(2) = 2e-030
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +1 / +1
Query: 136 GQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKR 315
GQ VT +E GSNP YLAVLV+F DGDV Q+D+ EA W PM+ SWG WRMD+
Sbjct: 2869258 GQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTAT 2869437
Query: 316 XLQXXXSLRXXXES 357
L+ S+R ES
Sbjct: 2869438 PLKAPFSIRVTTES 2869479
Score = 63.4 bits (132), Expect(2) = 3e-031
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1 / -2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRR 117
PV+KYHFDLSGTAFG +P +L AGIIDIQF+R
Sbjct: 3252027 PVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKR 3251914
Score = 59.7 bits (124), Expect(2) = 2e-030
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXG 138
P++ YHFD SG AFG P EL AGIID+QFRR C G
Sbjct: 2869123 PISAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPG 2869257
Score = 48.7 bits (100), Expect(2) = 9e-034
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / -1
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+DS LQ SLR +S
Sbjct: 3233683 TGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDS 3233579
Score = 46.4 bits (95), Expect(2) = 1e-031
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1 / -1
Query: 262 WMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
W PMR SWG WR+D+ LQ SLR ES
Sbjct: 3239536 WTPMRRSWGSIWRLDANHRLQGPFSLRMVSES 3239441
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
sequence
Length = 135510
Score = 117 bits (250), Expect(2) = 1e-033
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L +GIIDIQFRR C G + +E GSNP Y
Sbjct: 22603 PVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVY 22782
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGW 261
AVLVE+E DGDV QVD+ E+ S +
Sbjct: 22783 FAVLVEYEDLDGDVVQVDLMESKSAY 22860
Score = 112 bits (240), Expect(2) = 1e-031
Identities = 48/82 (58%), Positives = 55/82 (67%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L AGIIDIQFRR C G V +E GSNP Y
Sbjct: 16744 PVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVY 16923
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
LAVLVEF DG V Q+D+ E+
Sbjct: 16924 LAVLVEFANKDGTVVQLDVMES 16989
Score = 107 bits (228), Expect(2) = 1e-032
Identities = 46/89 (51%), Positives = 53/89 (59%)
Frame = +1 / +2
Query: 91 GIIDIQFRRXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
G++ + R C G VT +E GSNP Y AVLVE+E DGDV QVD+ EANS W P
Sbjct: 4958 GLLGVWPCRVPCNFPGLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDLMEANSQSWTP 5137
Query: 271 MRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
MR SWG WR+DS L SLR ES
Sbjct: 5138 MRESWGSIWRLDSNHRLTAPFSLRITNES 5224
Score = 63.4 bits (132), Expect(2) = 1e-032
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRR 117
PV+KYHFDLSGTAFG +P +L AGIIDIQF+R
Sbjct: 4526 PVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKR 4639
Score = 48.7 bits (100), Expect(2) = 1e-033
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +1
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+DS LQ SLR +S
Sbjct: 22870 TGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDS 22974
Score = 46.4 bits (95), Expect(2) = 1e-031
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1 / +1
Query: 262 WMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
W PMR SWG WR+D+ LQ SLR ES
Sbjct: 17017 WTPMRRSWGSIWRLDANHRLQGPFSLRMVSES 17112
>gb|AACV01022091.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022091, whole
genome shotgun sequence
Length = 36005
Score = 117 bits (250), Expect(2) = 1e-033
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L +GIIDIQFRR C G + +E GSNP Y
Sbjct: 21897 PVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVY 22076
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGW 261
AVLVE+E DGDV QVD+ E+ S +
Sbjct: 22077 FAVLVEYEDLDGDVVQVDLMESKSAY 22154
Score = 112 bits (240), Expect(2) = 1e-031
Identities = 48/82 (58%), Positives = 55/82 (67%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L AGIIDIQFRR C G V +E GSNP Y
Sbjct: 16038 PVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVY 16217
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
LAVLVEF DG V Q+D+ E+
Sbjct: 16218 LAVLVEFANKDGTVVQLDVMES 16283
Score = 107 bits (228), Expect(2) = 3e-033
Identities = 46/89 (51%), Positives = 53/89 (59%)
Frame = +1 / +1
Query: 91 GIIDIQFRRXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
G++ + R C G VT +E GSNP Y AVLVE+E DGDV QVD+ EANS W P
Sbjct: 4252 GLLGVWPCRVPCNFPGLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDLMEANSQSWTP 4431
Query: 271 MRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
MR SWG WR+DS L SLR ES
Sbjct: 4432 MRESWGSIWRLDSNHRLTAPFSLRITNES 4518
Score = 63.4 bits (132), Expect(2) = 3e-033
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRR 117
PV+KYHFDLSGTAFG +P +L AGIIDIQF+R
Sbjct: 3820 PVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKR 3933
Score = 48.7 bits (100), Expect(2) = 1e-033
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+DS LQ SLR +S
Sbjct: 22164 TGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDS 22268
Score = 46.4 bits (95), Expect(2) = 1e-031
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1 / +3
Query: 262 WMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
W PMR SWG WR+D+ LQ SLR ES
Sbjct: 16311 WTPMRRSWGSIWRLDANHRLQGPFSLRMVSES 16406
>dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F13, full
insert sequence
Length = 1263
Score = 117 bits (250), Expect(2) = 1e-033
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L +GIIDIQFRR C G + +E GSNP Y
Sbjct: 488 PVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVY 667
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGW 261
AVLVE+E DGDV QVD+ E+ S +
Sbjct: 668 FAVLVEYEDLDGDVVQVDLMESKSAY 745
Score = 48.7 bits (100), Expect(2) = 1e-033
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +2
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+DS LQ SLR +S
Sbjct: 755 TGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDS 859
>dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D06, full
insert sequence
Length = 1259
Score = 117 bits (250), Expect(2) = 1e-033
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L +GIIDIQFRR C G + +E GSNP Y
Sbjct: 482 PVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVY 661
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGW 261
AVLVE+E DGDV QVD+ E+ S +
Sbjct: 662 FAVLVEYEDLDGDVVQVDLMESKSAY 739
Score = 48.7 bits (100), Expect(2) = 1e-033
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +2
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+DS LQ SLR +S
Sbjct: 749 TGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDS 853
>dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A02, full
insert sequence
Length = 1257
Score = 117 bits (250), Expect(2) = 1e-033
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L +GIIDIQFRR C G + +E GSNP Y
Sbjct: 482 PVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVY 661
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGW 261
AVLVE+E DGDV QVD+ E+ S +
Sbjct: 662 FAVLVEYEDLDGDVVQVDLMESKSAY 739
Score = 48.7 bits (100), Expect(2) = 1e-033
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +2
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+DS LQ SLR +S
Sbjct: 749 TGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDS 853
>dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A09, full
insert sequence
Length = 1257
Score = 117 bits (250), Expect(2) = 1e-033
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L +GIIDIQFRR C G + +E GSNP Y
Sbjct: 482 PVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVY 661
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGW 261
AVLVE+E DGDV QVD+ E+ S +
Sbjct: 662 FAVLVEYEDLDGDVVQVDLMESKSAY 739
Score = 48.7 bits (100), Expect(2) = 1e-033
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +2
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+DS LQ SLR +S
Sbjct: 749 TGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDS 853
>ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB6
(OSJNBb0014I11.3), mRNA
Length = 1240
Score = 117 bits (250), Expect(2) = 1e-033
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L +GIIDIQFRR C G + +E GSNP Y
Sbjct: 469 PVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVY 648
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGW 261
AVLVE+E DGDV QVD+ E+ S +
Sbjct: 649 FAVLVEYEDLDGDVVQVDLMESKSAY 726
Score = 48.7 bits (100), Expect(2) = 1e-033
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +1
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+DS LQ SLR +S
Sbjct: 736 TGVWTPMRESWGSIWRLDSNHRLQAPFSLRIRSDS 840
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence,
complete sequence
Length = 147117
Score = 107 bits (228), Expect(2) = 1e-032
Identities = 46/89 (51%), Positives = 53/89 (59%)
Frame = +1 / -2
Query: 91 GIIDIQFRRXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
G++ + R C G VT +E GSNP Y AVLVE+E DGDV QVD+ EANS W P
Sbjct: 4415 GLLGVWPCRVPCNFPGLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDLMEANSQSWTP 4236
Query: 271 MRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
MR SWG WR+DS L SLR ES
Sbjct: 4235 MRESWGSIWRLDSNHRLTAPFSLRITNES 4149
Score = 63.4 bits (132), Expect(2) = 1e-032
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1 / -2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRR 117
PV+KYHFDLSGTAFG +P +L AGIIDIQF+R
Sbjct: 4847 PVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKR 4734
>dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G02, full
insert sequence
Length = 1027
Score = 114 bits (244), Expect(2) = 1e-032
Identities = 48/82 (58%), Positives = 56/82 (68%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PV+ YHFDLSGTAFG + EL AGIIDIQFRR C G VT +E GSNP Y
Sbjct: 375 PVSLYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVY 554
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
+A+LVE+E DGDV QVD+ E+
Sbjct: 555 MAILVEYENGDGDVVQVDLMES 620
Score = 47.8 bits (98), Expect(2) = 1e-032
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+D+ LQ SLR ES
Sbjct: 654 TGVWTPMRESWGSIWRLDTNHPLQGPFSLRITNES 758
>ref|NM_197699.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB2
(OSJNBb0014I11.2), mRNA
Length = 1262
Score = 112 bits (240), Expect(2) = 1e-031
Identities = 48/82 (58%), Positives = 55/82 (67%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L AGIIDIQFRR C G V +E GSNP Y
Sbjct: 403 PVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVY 582
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
LAVLVEF DG V Q+D+ E+
Sbjct: 583 LAVLVEFANKDGTVVQLDVMES 648
Score = 46.4 bits (95), Expect(2) = 1e-031
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1 / +1
Query: 262 WMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
W PMR SWG WR+D+ LQ SLR ES
Sbjct: 676 WTPMRRSWGSIWRLDANHRLQGPFSLRMVSES 771
>dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C01, full
insert sequence
Length = 1259
Score = 112 bits (240), Expect(2) = 1e-031
Identities = 48/82 (58%), Positives = 55/82 (67%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L AGIIDIQFRR C G V +E GSNP Y
Sbjct: 400 PVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVY 579
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
LAVLVEF DG V Q+D+ E+
Sbjct: 580 LAVLVEFANKDGTVVQLDVMES 645
Score = 46.4 bits (95), Expect(2) = 1e-031
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1 / +1
Query: 262 WMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
W PMR SWG WR+D+ LQ SLR ES
Sbjct: 673 WTPMRRSWGSIWRLDANHRLQGPFSLRMVSES 768
>dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F04, full
insert sequence
Length = 1043
Score = 112 bits (240), Expect(2) = 1e-031
Identities = 48/82 (58%), Positives = 55/82 (67%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L AGIIDIQFRR C G V +E GSNP Y
Sbjct: 402 PVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVY 581
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
LAVLVEF DG V Q+D+ E+
Sbjct: 582 LAVLVEFANKDGTVVQLDVMES 647
Score = 46.4 bits (95), Expect(2) = 1e-031
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1 / +3
Query: 262 WMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
W PMR SWG WR+D+ LQ SLR ES
Sbjct: 675 WTPMRRSWGSIWRLDANHRLQGPFSLRMVSES 770
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 111 bits (236), Expect(2) = 2e-031
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
P+++YHFDLSG AFG +P +L AGIID+QF R C G V +E GS+P Y
Sbjct: 158103 PLSQYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVY 157924
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSG 258
LAVLVE+E DGDV QVD+ EA +G
Sbjct: 157923 LAVLVEYENGDGDVAQVDLKEAGAG 157849
Score = 82.6 bits (174), Expect(2) = 5e-027
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = +1 / +3
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
VT +E GSNP Y AVLV++ DGDV +V++ E S W P+ SWG WR+D+ + L+
Sbjct: 376227 VTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTPKPLK 376406
Query: 325 XXXSLRXXXES 357
SLR ES
Sbjct: 376407 GPFSLRVTTES 376439
Score = 76.2 bits (160), Expect(2) = 2e-024
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1 / -3
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
+T IE SNP YLA+LV++ DGDV +V+I E S W ++ SWG WR+D+ + L+
Sbjct: 380098 ITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLK 379919
Query: 325 XXXSLRXXXE 354
S+R E
Sbjct: 379918 GPFSVRVTTE 379889
Score = 76.2 bits (160), Expect(2) = 2e-022
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1 / +1
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
+T IE SNP YLA+LV++ DGDV +V+I E S W ++ SWG WR+D+ + L+
Sbjct: 370423 ITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLK 370602
Query: 325 XXXSLRXXXE 354
S+R E
Sbjct: 370603 GPFSVRVTTE 370632
Score = 76.2 bits (160), Expect(2) = 2e-024
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1 / +3
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
+T IE SNP YLA+LV++ DGDV +V+I E S W ++ SWG WR+D+ + L+
Sbjct: 365760 ITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLK 365939
Query: 325 XXXSLRXXXE 354
S+R E
Sbjct: 365940 GPFSVRVTTE 365969
Score = 61.1 bits (127), Expect(2) = 5e-027
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQ 141
P+A YHFDLSG AFG + EL AGIID+QFRR C G+
Sbjct: 376083 PIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGE 376220
Score = 60.6 bits (126), Expect(3) = 2e-022
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1 / +3
Query: 115 RXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEA 249
R C G VT +E GSNP Y+A+LVE+E DGDV QVD+ E+
Sbjct: 169074 RVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMES 169208
Score = 59.3 bits (123), Expect(3) = 2e-022
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRR 117
PV+ YHFDLSGTAFG + EL AGIIDIQFRR
Sbjct: 168639 PVSLYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRR 168752
Score = 58.8 bits (122), Expect(2) = 2e-024
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +1 / -3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXC 126
P+A YHFDLSG AFG + EL AGIID QFRR C
Sbjct: 380242 PIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKC 380120
Score = 58.8 bits (122), Expect(2) = 2e-024
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXC 126
P+A YHFDLSG AFG + EL AGIID QFRR C
Sbjct: 365616 PIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKC 365738
Score = 51.9 bits (107), Expect(2) = 2e-022
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXC 126
P+A YHFDL G AFG + EL AGIID FRR C
Sbjct: 370279 PIAAYHFDLFGLAFGAMAKDGKDEELRKAGIIDT*FRRFKC 370401
Score = 47.8 bits (98), Expect(3) = 2e-022
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+D+ LQ SLR ES
Sbjct: 169242 TGVWTPMRESWGSIWRLDTNHPLQGPFSLRITNES 169346
Score = 47.3 bits (97), Expect(2) = 2e-031
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1 / -1
Query: 247 ANSGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
A G W PMR SWG WR+DS L+ S+R +S
Sbjct: 157854 AGGGRWTPMRESWGSVWRLDSNHRLRAPFSIRIRSDS 157744
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
Length = 162241
Score = 111 bits (236), Expect(2) = 2e-031
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
P+++YHFDLSG AFG +P +L AGIID+QF R C G V +E GS+P Y
Sbjct: 104563 PLSQYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVY 104742
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSG 258
LAVLVE+E DGDV QVD+ EA +G
Sbjct: 104743 LAVLVEYENGDGDVAQVDLKEAGAG 104817
Score = 60.6 bits (126), Expect(3) = 2e-024
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1 / -1
Query: 115 RXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEA 249
R C G VT +E GSNP Y+A+LVE+E DGDV QVD+ E+
Sbjct: 93592 RVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMES 93458
Score = 59.3 bits (123), Expect(3) = 2e-024
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRR 117
PV+ YHFDLSGTAFG + EL AGIIDIQFRR
Sbjct: 94027 PVSLYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRR 93914
Score = 47.8 bits (98), Expect(3) = 2e-024
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / -1
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+D+ LQ SLR ES
Sbjct: 93424 TGVWTPMRESWGSIWRLDTNHPLQGPFSLRITNES 93320
Score = 47.3 bits (97), Expect(2) = 2e-031
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1 / +1
Query: 247 ANSGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
A G W PMR SWG WR+DS L+ S+R +S
Sbjct: 104812 AGGGRWTPMRESWGSVWRLDSNHRLRAPFSIRIRSDS 104922
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNAb0079B22, from chromosome 3, complete sequence
Length = 156933
Score = 111 bits (236), Expect(2) = 2e-031
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
P+++YHFDLSG AFG +P +L AGIID+QF R C G V +E GS+P Y
Sbjct: 92103 PLSQYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVY 91924
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSG 258
LAVLVE+E DGDV QVD+ EA +G
Sbjct: 91923 LAVLVEYENGDGDVAQVDLKEAGAG 91849
Score = 60.6 bits (126), Expect(3) = 2e-024
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1 / +3
Query: 115 RXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEA 249
R C G VT +E GSNP Y+A+LVE+E DGDV QVD+ E+
Sbjct: 103074 RVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMES 103208
Score = 59.3 bits (123), Expect(3) = 2e-024
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRR 117
PV+ YHFDLSGTAFG + EL AGIIDIQFRR
Sbjct: 102639 PVSLYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRR 102752
Score = 47.8 bits (98), Expect(3) = 2e-024
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+D+ LQ SLR ES
Sbjct: 103242 TGVWTPMRESWGSIWRLDTNHPLQGPFSLRITNES 103346
Score = 47.3 bits (97), Expect(2) = 2e-031
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1 / -1
Query: 247 ANSGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
A G W PMR SWG WR+DS L+ S+R +S
Sbjct: 91854 AGGGRWTPMRESWGSVWRLDSNHRLRAPFSIRIRSDS 91744
>dbj|AK070972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069H18, full
insert sequence
Length = 1019
Score = 111 bits (236), Expect(2) = 2e-031
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
P+++YHFDLSG AFG +P +L AGIID+QF R C G V +E GS+P Y
Sbjct: 452 PLSQYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVY 631
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSG 258
LAVLVE+E DGDV QVD+ EA +G
Sbjct: 632 LAVLVEYENGDGDVAQVDLKEAGAG 706
Score = 47.3 bits (97), Expect(2) = 2e-031
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1 / +2
Query: 247 ANSGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
A G W PMR SWG WR+DS L+ S+R +S
Sbjct: 701 AGGGRWTPMRESWGSVWRLDSNHRLRAPFSIRIRSDS 811
>dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F11, full
insert sequence
Length = 1026
Score = 109 bits (233), Expect(2) = 1e-030
Identities = 47/82 (57%), Positives = 54/82 (65%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L AGIIDIQFRR C G V +E GSNP Y
Sbjct: 393 PVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVY 572
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
LAVLVEF D V Q+D+ E+
Sbjct: 573 LAVLVEFANKDDTVVQLDVMES 638
Score = 46.4 bits (95), Expect(2) = 1e-030
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1 / +3
Query: 262 WMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
W PMR SWG WR+D+ LQ SLR ES
Sbjct: 666 WTPMRRSWGSIWRLDANHRLQGPFSLRMVSES 761
>dbj|AK070187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043G12, full
insert sequence
Length = 1121
Score = 95.5 bits (202), Expect(2) = 2e-030
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +1 / +2
Query: 136 GQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKR 315
GQ VT +E GSNP YLAVLV+F DGDV Q+D+ EA W PM+ SWG WRMD+
Sbjct: 572 GQKVTSHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTAT 751
Query: 316 XLQXXXSLRXXXES 357
L+ S+R ES
Sbjct: 752 PLKAPFSIRVTTES 793
Score = 59.7 bits (124), Expect(2) = 2e-030
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXG 138
P++ YHFD SG AFG P EL AGIID+QFRR C G
Sbjct: 437 PISAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPG 571
>gb|AU198282.1|AU198282 AU198282 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S16583, mRNA sequence
Length = 472
Score = 112 bits (240), Expect(2) = 2e-030
Identities = 48/82 (58%), Positives = 55/82 (67%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L AGIIDIQFRR C G V +E GSNP Y
Sbjct: 82 PVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVY 261
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
LAVLVEF DG V Q+D+ E+
Sbjct: 262 LAVLVEFANKDGTVVQLDVMES 327
Score = 40.9 bits (83), Expect(2) = 2e-030
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1 / +1
Query: 262 WMPMRXSWGXXWRMDSKRXLQXXXSL 339
W PMR SWG WR+D+ LQ SL
Sbjct: 355 WTPMRRSWGSIWRLDANHRLQGPFSL 432
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete
sequence
Length = 158550
Score = 95.0 bits (201), Expect(2) = 3e-030
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +1 / -1
Query: 136 GQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKR 315
GQ VT +E GSNP YLAVLV+F DGDV Q+D+ EA W PM+ SWG WRMD+
Sbjct: 117327 GQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTAT 117148
Query: 316 XLQXXXSLRXXXES 357
L+ S+R ES
Sbjct: 117147 PLKAPFSIRVTTES 117106
Score = 59.7 bits (124), Expect(2) = 3e-030
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXG 138
P++ YHFD SG AFG P EL AGIID+QFRR C G
Sbjct: 117462 PISAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPG 117328
>gb|AACV01022050.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022050, whole
genome shotgun sequence
Length = 7523
Score = 95.0 bits (201), Expect(2) = 3e-030
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +1 / -2
Query: 136 GQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKR 315
GQ VT +E GSNP YLAVLV+F DGDV Q+D+ EA W PM+ SWG WRMD+
Sbjct: 1237 GQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTAT 1058
Query: 316 XLQXXXSLRXXXES 357
L+ S+R ES
Sbjct: 1057 PLKAPFSIRVTTES 1016
Score = 59.7 bits (124), Expect(2) = 3e-030
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = +1 / -2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXG 138
P++ YHFD SG AFG P EL AGIID+QFRR C G
Sbjct: 1372 PISAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPG 1238
>ref|NM_197637.1| Oryza sativa (japonica cultivar-group) beta-expansin
(OSJNBa0082M15.4), mRNA
Length = 1148
Score = 95.0 bits (201), Expect(2) = 3e-030
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +1 / +1
Query: 136 GQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKR 315
GQ VT +E GSNP YLAVLV+F DGDV Q+D+ EA W PM+ SWG WRMD+
Sbjct: 556 GQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTAT 735
Query: 316 XLQXXXSLRXXXES 357
L+ S+R ES
Sbjct: 736 PLKAPFSIRVTTES 777
Score = 59.7 bits (124), Expect(2) = 3e-030
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXG 138
P++ YHFD SG AFG P EL AGIID+QFRR C G
Sbjct: 421 PISAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPG 555
>dbj|AK099112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033P05, full
insert sequence
Length = 1071
Score = 95.0 bits (201), Expect(2) = 3e-030
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +1 / +2
Query: 136 GQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKR 315
GQ VT +E GSNP YLAVLV+F DGDV Q+D+ EA W PM+ SWG WRMD+
Sbjct: 572 GQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTAT 751
Query: 316 XLQXXXSLRXXXES 357
L+ S+R ES
Sbjct: 752 PLKAPFSIRVTTES 793
Score = 59.7 bits (124), Expect(2) = 3e-030
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXG 138
P++ YHFD SG AFG P EL AGIID+QFRR C G
Sbjct: 437 PISAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPG 571
>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full
insert sequence
Length = 1266
Score = 102 bits (217), Expect(2) = 6e-029
Identities = 44/89 (49%), Positives = 55/89 (61%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA +HFDLSGTAFG +P +L +GIIDI+F R C G + +E SNP Y
Sbjct: 519 PVAPFHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVY 698
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
AVLVE+E DGDV QVD+ E+ + P
Sbjct: 699 FAVLVEYEDGDGDVVQVDLMESKTAHGPP 785
Score = 47.8 bits (98), Expect(2) = 6e-029
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+D+ LQ S+R ES
Sbjct: 786 TGGWTPMRESWGSIWRLDTNHRLQAPFSIRIRNES 890
>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full
insert sequence
Length = 1794
Score = 102 bits (217), Expect(2) = 8e-029
Identities = 44/89 (49%), Positives = 55/89 (61%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA +HFDLSGTAFG +P +L +GIIDI+F R C G + +E SNP Y
Sbjct: 525 PVAPFHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVY 704
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
AVLVE+E DGDV QVD+ E+ + P
Sbjct: 705 FAVLVEYEDGDGDVVQVDLMESKTAHGPP 791
Score = 47.3 bits (97), Expect(2) = 8e-029
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+D+ LQ S+R ES
Sbjct: 792 TGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNES 896
>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full
insert sequence
Length = 1475
Score = 102 bits (217), Expect(2) = 8e-029
Identities = 44/89 (49%), Positives = 55/89 (61%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA +HFDLSGTAFG +P +L +GIIDI+F R C G + +E SNP Y
Sbjct: 707 PVAPFHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVY 886
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
AVLVE+E DGDV QVD+ E+ + P
Sbjct: 887 FAVLVEYEDGDGDVVQVDLMESKTAHGPP 973
Score = 47.3 bits (97), Expect(2) = 8e-029
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1 / +2
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+D+ LQ S+R ES
Sbjct: 974 TGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNES 1078
>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4
(OSJNBa0010C11.2), mRNA
Length = 1340
Score = 102 bits (217), Expect(2) = 8e-029
Identities = 44/89 (49%), Positives = 55/89 (61%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA +HFDLSGTAFG +P +L +GIIDI+F R C G + +E SNP Y
Sbjct: 513 PVAPFHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVY 692
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
AVLVE+E DGDV QVD+ E+ + P
Sbjct: 693 FAVLVEYEDGDGDVVQVDLMESKTAHGPP 779
Score = 47.3 bits (97), Expect(2) = 8e-029
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+D+ LQ S+R ES
Sbjct: 780 TGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNES 884
>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full
insert sequence
Length = 1290
Score = 102 bits (217), Expect(2) = 8e-029
Identities = 44/89 (49%), Positives = 55/89 (61%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA +HFDLSGTAFG +P +L +GIIDI+F R C G + +E SNP Y
Sbjct: 526 PVAPFHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVY 705
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
AVLVE+E DGDV QVD+ E+ + P
Sbjct: 706 FAVLVEYEDGDGDVVQVDLMESKTAHGPP 792
Score = 47.3 bits (97), Expect(2) = 8e-029
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1 / +1
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+D+ LQ S+R ES
Sbjct: 793 TGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNES 897
>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full
insert sequence
Length = 1293
Score = 100 bits (214), Expect(2) = 2e-028
Identities = 43/89 (48%), Positives = 55/89 (61%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA +HFDLSGTAFG +P +L +GIIDI+F R C G + +E SNP Y
Sbjct: 525 PVAPFHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVY 704
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
AVLVE+E DGDV Q+D+ E+ + P
Sbjct: 705 FAVLVEYEDGDGDVVQMDLMESKTAHGPP 791
Score = 47.3 bits (97), Expect(2) = 2e-028
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+D+ LQ S+R ES
Sbjct: 792 TGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNES 896
>gb|AU094059.1|AU094059 AU094059 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2136, mRNA sequence
Length = 711
Score = 95.0 bits (201), Expect(2) = 4e-027
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +1 / +3
Query: 136 GQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKR 315
GQ VT +E GSNP YLAVLV+F DGDV Q+D+ EA W PM+ SWG WRMD+
Sbjct: 150 GQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTAT 329
Query: 316 XLQXXXSLRXXXES 357
L+ S+R ES
Sbjct: 330 PLKAPFSIRVTTES 371
Score = 49.2 bits (101), Expect(2) = 4e-027
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXG 138
P++ Y FD SG AFG P E AGII +QFRR C G
Sbjct: 15 PISAYPFDFSGKAFGAMACPGKETESRKAGIIXMQFRRVRCKYPG 149
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010
genomic scaffold, whole genome shotgun sequence
Length = 13858245
Score = 82.6 bits (174), Expect(2) = 4e-027
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = +1 / -1
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
VT +E GSNP Y AVLV++ DGDV +V++ E S W P+ SWG WR+D+ + L+
Sbjct: 387351 VTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTPKPLK 387172
Query: 325 XXXSLRXXXES 357
SLR ES
Sbjct: 387171 GPFSLRVTTES 387139
Score = 76.2 bits (160), Expect(2) = 2e-022
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1 / -1
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
+T IE SNP YLA+LV++ DGDV +V+I E S W ++ SWG WR+D+ + L+
Sbjct: 392922 ITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLK 392743
Query: 325 XXXSLRXXXE 354
S+R E
Sbjct: 392742 GPFSVRVTTE 392713
Score = 76.2 bits (160), Expect(2) = 2e-024
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1 / -1
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
+T IE SNP YLA+LV++ DGDV +V+I E S W ++ SWG WR+D+ + L+
Sbjct: 396843 ITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLK 396664
Query: 325 XXXSLRXXXE 354
S+R E
Sbjct: 396663 GPFSVRVTTE 396634
Score = 61.1 bits (127), Expect(2) = 4e-027
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQ 141
P+A YHFDLSG AFG + EL AGIID+QFRR C G+
Sbjct: 387495 PIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGE 387358
Score = 58.8 bits (122), Expect(2) = 2e-024
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXC 126
P+A YHFDLSG AFG + EL AGIID QFRR C
Sbjct: 396987 PIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKC 396865
Score = 51.9 bits (107), Expect(2) = 2e-022
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXC 126
P+A YHFDL G AFG + EL AGIID FRR C
Sbjct: 393066 PIAAYHFDLFGLAFGAMAKDGKDEELRKAGIIDT*FRRFKC 392944
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08,
complete sequence
Length = 137033
Score = 82.6 bits (174), Expect(2) = 5e-027
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = +1 / +2
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
VT +E GSNP Y AVLV++ DGDV +V++ E S W P+ SWG WR+D+ + L+
Sbjct: 103757 VTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTPKPLK 103936
Query: 325 XXXSLRXXXES 357
SLR ES
Sbjct: 103937 GPFSLRVTTES 103969
Score = 76.2 bits (160), Expect(2) = 2e-022
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1 / +3
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
+T IE SNP YLA+LV++ DGDV +V+I E S W ++ SWG WR+D+ + L+
Sbjct: 97953 ITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLK 98132
Query: 325 XXXSLRXXXE 354
S+R E
Sbjct: 98133 GPFSVRVTTE 98162
Score = 76.2 bits (160), Expect(2) = 2e-024
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1 / +2
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
+T IE SNP YLA+LV++ DGDV +V+I E S W ++ SWG WR+D+ + L+
Sbjct: 93290 ITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLK 93469
Query: 325 XXXSLRXXXE 354
S+R E
Sbjct: 93470 GPFSVRVTTE 93499
Score = 76.2 bits (160), Expect(2) = 2e-024
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1 / -3
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
+T IE SNP YLA+LV++ DGDV +V+I E S W ++ SWG WR+D+ + L+
Sbjct: 107628 ITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLK 107449
Query: 325 XXXSLRXXXE 354
S+R E
Sbjct: 107448 GPFSVRVTTE 107419
Score = 61.1 bits (127), Expect(2) = 5e-027
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQ 141
P+A YHFDLSG AFG + EL AGIID+QFRR C G+
Sbjct: 103613 PIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGE 103750
Score = 58.8 bits (122), Expect(2) = 2e-024
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXC 126
P+A YHFDLSG AFG + EL AGIID QFRR C
Sbjct: 93146 PIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKC 93268
Score = 58.8 bits (122), Expect(2) = 2e-024
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +1 / -3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXC 126
P+A YHFDLSG AFG + EL AGIID QFRR C
Sbjct: 107772 PIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKC 107650
Score = 51.9 bits (107), Expect(2) = 2e-022
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXC 126
P+A YHFDL G AFG + EL AGIID FRR C
Sbjct: 97809 PIAAYHFDLFGLAFGAMAKDGKDEELRKAGIIDT*FRRFKC 97931
>gb|AACV01005738.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005738, whole
genome shotgun sequence
Length = 8631
Score = 82.6 bits (174), Expect(2) = 5e-027
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = +1 / -3
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
VT +E GSNP Y AVLV++ DGDV +V++ E S W P+ SWG WR+D+ + L+
Sbjct: 3484 VTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTPKPLK 3305
Query: 325 XXXSLRXXXES 357
SLR ES
Sbjct: 3304 GPFSLRVTTES 3272
Score = 61.1 bits (127), Expect(2) = 5e-027
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / -3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQ 141
P+A YHFDLSG AFG + EL AGIID+QFRR C G+
Sbjct: 3628 PIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGE 3491
>dbj|AK069853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036C07, full
insert sequence
Length = 1101
Score = 82.6 bits (174), Expect(2) = 5e-027
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = +1 / +3
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
VT +E GSNP Y AVLV++ DGDV +V++ E S W P+ SWG WR+D+ + L+
Sbjct: 543 VTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTPKPLK 722
Query: 325 XXXSLRXXXES 357
SLR ES
Sbjct: 723 GPFSLRVTTES 755
Score = 61.1 bits (127), Expect(2) = 5e-027
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQ 141
P+A YHFDLSG AFG + EL AGIID+QFRR C G+
Sbjct: 399 PIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGE 536
>ref|NM_187642.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 804
Score = 82.6 bits (174), Expect(2) = 5e-027
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = +1 / +1
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
VT +E GSNP Y AVLV++ DGDV +V++ E S W P+ SWG WR+D+ + L+
Sbjct: 508 VTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTPKPLK 687
Query: 325 XXXSLRXXXES 357
SLR ES
Sbjct: 688 GPFSLRVTTES 720
Score = 61.1 bits (127), Expect(2) = 5e-027
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQ 141
P+A YHFDLSG AFG + EL AGIID+QFRR C G+
Sbjct: 364 PIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGE 501
>gb|AACV01005724.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005724, whole
genome shotgun sequence
Length = 15116
Score = 60.6 bits (126), Expect(3) = 3e-026
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1 / -1
Query: 115 RXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEA 249
R C G VT +E GSNP Y+A+LVE+E DGDV QVD+ E+
Sbjct: 3917 RVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMES 3783
Score = 59.3 bits (123), Expect(3) = 3e-026
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRR 117
PV+ YHFDLSGTAFG + EL AGIIDIQFRR
Sbjct: 4352 PVSLYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRR 4239
Score = 47.8 bits (98), Expect(3) = 3e-026
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / -1
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+D+ LQ SLR ES
Sbjct: 3749 TGVWTPMRESWGSIWRLDTNHPLQGPFSLRITNES 3645
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 117 bits (250), Expect = 5e-025
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1 / -2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L +GIIDIQFRR C G + +E GSNP Y
Sbjct: 20152903 PVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVY 20152724
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGW 261
AVLVE+E DGDV QVD+ E+ S +
Sbjct: 20152723 FAVLVEYEDLDGDVVQVDLMESKSAY 20152646
Score = 112 bits (240), Expect = 1e-023
Identities = 48/82 (58%), Positives = 55/82 (67%)
Frame = +1 / -2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L AGIIDIQFRR C G V +E GSNP Y
Sbjct: 20158762 PVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVY 20158583
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
LAVLVEF DG V Q+D+ E+
Sbjct: 20158582 LAVLVEFANKDGTVVQLDVMES 20158517
Score = 107 bits (228), Expect = 5e-022
Identities = 46/89 (51%), Positives = 53/89 (59%)
Frame = +1 / -3
Query: 91 GIIDIQFRRXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
G++ + R C G VT +E GSNP Y AVLVE+E DGDV QVD+ EANS W P
Sbjct: 20170548 GLLGVWPCRVPCNFPGLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDLMEANSQSWTP 20170369
Query: 271 MRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
MR SWG WR+DS L SLR ES
Sbjct: 20170368 MRESWGSIWRLDSNHRLTAPFSLRITNES 20170282
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 117 bits (250), Expect = 5e-025
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L +GIIDIQFRR C G + +E GSNP Y
Sbjct: 21311756 PVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVY 21311577
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGW 261
AVLVE+E DGDV QVD+ E+ S +
Sbjct: 21311576 FAVLVEYEDLDGDVVQVDLMESKSAY 21311499
Score = 112 bits (240), Expect = 1e-023
Identities = 48/82 (58%), Positives = 55/82 (67%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L AGIIDIQFRR C G V +E GSNP Y
Sbjct: 21317615 PVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVY 21317436
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
LAVLVEF DG V Q+D+ E+
Sbjct: 21317435 LAVLVEFANKDGTVVQLDVMES 21317370
Score = 107 bits (228), Expect = 5e-022
Identities = 46/89 (51%), Positives = 53/89 (59%)
Frame = +1 / -2
Query: 91 GIIDIQFRRXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
G++ + R C G VT +E GSNP Y AVLVE+E DGDV QVD+ EANS W P
Sbjct: 21329401 GLLGVWPCRVPCNFPGLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDLMEANSQSWTP 21329222
Query: 271 MRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
MR SWG WR+DS L SLR ES
Sbjct: 21329221 MRESWGSIWRLDSNHRLTAPFSLRITNES 21329135
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 117 bits (250), Expect = 5e-025
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1 / -2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L +GIIDIQFRR C G + +E GSNP Y
Sbjct: 21323020 PVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVY 21322841
Query: 184 LAVLVEFEXXDGDVXQVDIXEANSGW 261
AVLVE+E DGDV QVD+ E+ S +
Sbjct: 21322840 FAVLVEYEDLDGDVVQVDLMESKSAY 21322763
Score = 112 bits (240), Expect = 1e-023
Identities = 48/82 (58%), Positives = 55/82 (67%)
Frame = +1 / -2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA+YHFDLSGTAFG +P +L AGIIDIQFRR C G V +E GSNP Y
Sbjct: 21328879 PVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVY 21328700
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
LAVLVEF DG V Q+D+ E+
Sbjct: 21328699 LAVLVEFANKDGTVVQLDVMES 21328634
Score = 107 bits (228), Expect = 5e-022
Identities = 46/89 (51%), Positives = 53/89 (59%)
Frame = +1 / -3
Query: 91 GIIDIQFRRXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMP 270
G++ + R C G VT +E GSNP Y AVLVE+E DGDV QVD+ EANS W P
Sbjct: 21340665 GLLGVWPCRVPCNFPGLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDLMEANSQSWTP 21340486
Query: 271 MRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
MR SWG WR+DS L SLR ES
Sbjct: 21340485 MRESWGSIWRLDSNHRLTAPFSLRITNES 21340399
>gb|C27175.1|C27175 C27175 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C51142_1A, mRNA sequence
Length = 462
Score = 101 bits (215), Expect(2) = 1e-024
Identities = 43/82 (52%), Positives = 53/82 (64%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXCXXXGQXVTXXIEHGSNPXY 183
PVA +HFDLSGTAFG +P +L +GIIDI+F R C G + +E SNP Y
Sbjct: 67 PVAPFHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVY 246
Query: 184 LAVLVEFEXXDGDVXQVDIXEA 249
AVLVE+E DGDV QVD+ E+
Sbjct: 247 FAVLVEYEDGDGDVVQVDLMES 312
Score = 33.1 bits (66), Expect(2) = 1e-024
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1 / +2
Query: 268 PMRXSWGXXWRMDSKRXLQXXXSLRXXXE 354
PMR SWG WR D+ +Q +R E
Sbjct: 350 PMRESWGSIWRXDNNHRVQXPFFIRIRNE 436
>gb|BP184832.1|BP184832 BP184832 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 19YPR012, mRNA
sequence
Length = 629
Score = 76.2 bits (160), Expect(2) = 1e-024
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1 / +3
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
+T IE SNP YLA+LV++ DGDV +V+I E S W ++ SWG WR+D+ + L+
Sbjct: 327 ITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLK 506
Query: 325 XXXSLRXXXE 354
S+R E
Sbjct: 507 GPFSVRVTTE 536
Score = 58.8 bits (122), Expect(2) = 1e-024
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXC 126
P+A YHFDLSG AFG + EL AGIID QFRR C
Sbjct: 183 PIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKC 305
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBb0080O10, from chromosome 3, complete sequence
Length = 127917
Score = 60.6 bits (126), Expect(3) = 2e-024
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1 / +3
Query: 115 RXXCXXXGQXVTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEA 249
R C G VT +E GSNP Y+A+LVE+E DGDV QVD+ E+
Sbjct: 6141 RVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMES 6275
Score = 59.3 bits (123), Expect(3) = 2e-024
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +1 / +3
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRR 117
PV+ YHFDLSGTAFG + EL AGIIDIQFRR
Sbjct: 5706 PVSLYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRR 5819
Score = 47.8 bits (98), Expect(3) = 2e-024
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +3
Query: 253 SGWWMPMRXSWGXXWRMDSKRXLQXXXSLRXXXES 357
+G W PMR SWG WR+D+ LQ SLR ES
Sbjct: 6309 TGVWTPMRESWGSIWRLDTNHPLQGPFSLRITNES 6413
>gb|AACV01005740.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005740,
whole genome shotgun sequence
Length = 10656
Score = 76.2 bits (160), Expect(2) = 2e-024
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1 / -1
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
+T IE SNP YLA+LV++ DGDV +V+I E S W ++ SWG WR+D+ + L+
Sbjct: 306 ITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLK 127
Query: 325 XXXSLRXXXE 354
S+R E
Sbjct: 126 GPFSVRVTTE 97
Score = 58.8 bits (122), Expect(2) = 2e-024
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +1 / -1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXC 126
P+A YHFDLSG AFG + EL AGIID QFRR C
Sbjct: 450 PIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKC 328
>dbj|AK072792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142P17, full
insert sequence
Length = 1164
Score = 76.2 bits (160), Expect(2) = 2e-024
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1 / +2
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
+T IE SNP YLA+LV++ DGDV +V+I E S W ++ SWG WR+D+ + L+
Sbjct: 542 ITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLK 721
Query: 325 XXXSLRXXXE 354
S+R E
Sbjct: 722 GPFSVRVTTE 751
Score = 58.8 bits (122), Expect(2) = 2e-024
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +1 / +2
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXC 126
P+A YHFDLSG AFG + EL AGIID QFRR C
Sbjct: 398 PIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKC 520
>ref|NM_187639.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 804
Score = 76.2 bits (160), Expect(2) = 2e-024
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1 / +1
Query: 145 VTXXIEHGSNPXYLAVLVEFEXXDGDVXQVDIXEANSGWWMPMRXSWGXXWRMDSKRXLQ 324
+T IE SNP YLA+LV++ DGDV +V+I E S W ++ SWG WR+D+ + L+
Sbjct: 508 ITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLK 687
Query: 325 XXXSLRXXXE 354
S+R E
Sbjct: 688 GPFSVRVTTE 717
Score = 58.8 bits (122), Expect(2) = 2e-024
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 4 PVAKYHFDLSGTAFGGXXQPXXXXELXXAGIIDIQFRRXXC 126
P+A YHFDLSG AFG + EL AGIID QFRR C
Sbjct: 364 PIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKC 486
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,424,080,876
Number of Sequences: 438736
Number of extensions: 9426537
Number of successful extensions: 75476
Number of sequences better than 1.0e-020: 89
length of database: 933,473,305
effective HSP length: 56
effective length of database: 908,904,089
effective search space used: 56352053518
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)