TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAS4c05.yg.2.1
(318 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC091090.1|AC091090 Oryza sativa (japonica cultivar-grou... 134 2e-030
dbj|AK121341.1| Oryza sativa (japonica cultivar-group) cDNA... 134 2e-030
gb|AACV01002933.1| Oryza sativa (japonica cultivar-group) c... 134 2e-030
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 134 2e-030
ref|XM_463619.1| Oryza sativa (japonica cultivar-group), p... 134 2e-030
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 134 2e-030
dbj|AP003437.3| Oryza sativa (japonica cultivar-group) geno... 134 2e-030
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 134 2e-030
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 134 2e-030
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 134 2e-030
dbj|D45890.1|RICSPS1 Oryza sativa DNA for sucrose phosphate... 133 8e-030
>gb|AC091090.1|AC091090 Oryza sativa (japonica cultivar-group) chromosome 1 clone P0678F11, ***
SEQUENCING IN PROGRESS ***, 3 ordered pieces
Length = 155574
Score = 134 bits (288), Expect = 2e-030
Identities = 60/79 (75%), Positives = 63/79 (79%)
Frame = -3 / +2
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
RLFVIAV CY ASK+M QVI EVF VRSDSQM +ISGF LS AMPL ETL+LLQL
Sbjct: 116417 RLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQL 116596
Query: 58 GKIPAXDFDALICGSGSEV 2
GKIP DFDALICGSGSEV
Sbjct: 116597 GKIPPTDFDALICGSGSEV 116653
Score = 125 bits (267), Expect = 2e-027
Identities = 56/77 (72%), Positives = 59/77 (76%)
Frame = +3 / -1
Query: 3 TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
TSLPLPQM ASKS GILPSCRS SVS +G+A DS NPEIL+IWESDRT L TS ITC I
Sbjct: 116652 TSLPLPQMSASKSVGGILPSCRSLSVSGSGIAVDSANPEILDIWESDRTALNTSWITCSI 116473
Query: 183 FLLAXXXXX*QXTAMTN 233
LLA *Q TAMTN
Sbjct: 116472 LLLALPSSP*QSTAMTN 116422
Score = 114 bits (243), Expect = 4e-024
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +2 / -3
Query: 2 HLAAAATDEGVEVGXWDLAELQKLECLGQRHGXXQREP*DLEHLGVRSDXXENFLDHLXH 181
HLAAAA DE VEVG WDLA+LQKLE L QRH QREP D HLGVR D E+ LDHL H
Sbjct: 116653 HLAAAAADERVEVGRWDLAQLQKLERLRQRHRRRQREPGDPGHLGVRPDSPEHLLDHLQH 116474
Query: 182 LLASTXXXXVAXHSYDEQ 235
LA VA H YDEQ
Sbjct: 116473 PLAGAAIVAVAVHGYDEQ 116420
>dbj|AK121341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120M11, full
insert sequence
Length = 3825
Score = 134 bits (288), Expect = 2e-030
Identities = 60/79 (75%), Positives = 63/79 (79%)
Frame = -3 / +2
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
RLFVIAV CY ASK+M QVI EVF VRSDSQM +ISGF LS AMPL ETL+LLQL
Sbjct: 2621 RLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQL 2800
Query: 58 GKIPAXDFDALICGSGSEV 2
GKIP DFDALICGSGSEV
Sbjct: 2801 GKIPPTDFDALICGSGSEV 2857
Score = 125 bits (267), Expect = 2e-027
Identities = 56/77 (72%), Positives = 59/77 (76%)
Frame = +3 / -1
Query: 3 TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
TSLPLPQM ASKS GILPSCRS SVS +G+A DS NPEIL+IWESDRT L TS ITC I
Sbjct: 2856 TSLPLPQMSASKSVGGILPSCRSLSVSGSGIAVDSANPEILDIWESDRTALNTSWITCSI 2677
Query: 183 FLLAXXXXX*QXTAMTN 233
LLA *Q TAMTN
Sbjct: 2676 LLLALPSSP*QSTAMTN 2626
Score = 114 bits (243), Expect = 4e-024
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +2 / -3
Query: 2 HLAAAATDEGVEVGXWDLAELQKLECLGQRHGXXQREP*DLEHLGVRSDXXENFLDHLXH 181
HLAAAA DE VEVG WDLA+LQKLE L QRH QREP D HLGVR D E+ LDHL H
Sbjct: 2857 HLAAAAADERVEVGRWDLAQLQKLERLRQRHRRRQREPGDPGHLGVRPDSPEHLLDHLQH 2678
Query: 182 LLASTXXXXVAXHSYDEQ 235
LA VA H YDEQ
Sbjct: 2677 PLAGAAIVAVAVHGYDEQ 2624
>gb|AACV01002933.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002933, whole
genome shotgun sequence
Length = 31042
Score = 134 bits (288), Expect = 2e-030
Identities = 60/79 (75%), Positives = 63/79 (79%)
Frame = -3 / +2
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
RLFVIAV CY ASK+M QVI EVF VRSDSQM +ISGF LS AMPL ETL+LLQL
Sbjct: 11669 RLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQL 11848
Query: 58 GKIPAXDFDALICGSGSEV 2
GKIP DFDALICGSGSEV
Sbjct: 11849 GKIPPTDFDALICGSGSEV 11905
Score = 125 bits (267), Expect = 2e-027
Identities = 56/77 (72%), Positives = 59/77 (76%)
Frame = +3 / -2
Query: 3 TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
TSLPLPQM ASKS GILPSCRS SVS +G+A DS NPEIL+IWESDRT L TS ITC I
Sbjct: 11904 TSLPLPQMSASKSVGGILPSCRSLSVSGSGIAVDSANPEILDIWESDRTALNTSWITCSI 11725
Query: 183 FLLAXXXXX*QXTAMTN 233
LLA *Q TAMTN
Sbjct: 11724 LLLALPSSP*QSTAMTN 11674
Score = 114 bits (243), Expect = 4e-024
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +2 / -1
Query: 2 HLAAAATDEGVEVGXWDLAELQKLECLGQRHGXXQREP*DLEHLGVRSDXXENFLDHLXH 181
HLAAAA DE VEVG WDLA+LQKLE L QRH QREP D HLGVR D E+ LDHL H
Sbjct: 11905 HLAAAAADERVEVGRWDLAQLQKLERLRQRHRRRQREPGDPGHLGVRPDSPEHLLDHLQH 11726
Query: 182 LLASTXXXXVAXHSYDEQ 235
LA VA H YDEQ
Sbjct: 11725 PLAGAAIVAVAVHGYDEQ 11672
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 134 bits (288), Expect = 2e-030
Identities = 60/79 (75%), Positives = 63/79 (79%)
Frame = -3 / -1
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
RLFVIAV CY ASK+M QVI EVF VRSDSQM +ISGF LS AMPL ETL+LLQL
Sbjct: 40176744 RLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQL 40176565
Query: 58 GKIPAXDFDALICGSGSEV 2
GKIP DFDALICGSGSEV
Sbjct: 40176564 GKIPPTDFDALICGSGSEV 40176508
Score = 125 bits (267), Expect = 2e-027
Identities = 56/77 (72%), Positives = 59/77 (76%)
Frame = +3 / +2
Query: 3 TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
TSLPLPQM ASKS GILPSCRS SVS +G+A DS NPEIL+IWESDRT L TS ITC I
Sbjct: 40176509 TSLPLPQMSASKSVGGILPSCRSLSVSGSGIAVDSANPEILDIWESDRTALNTSWITCSI 40176688
Query: 183 FLLAXXXXX*QXTAMTN 233
LLA *Q TAMTN
Sbjct: 40176689 LLLALPSSP*QSTAMTN 40176739
Score = 114 bits (243), Expect = 4e-024
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +2 / +1
Query: 2 HLAAAATDEGVEVGXWDLAELQKLECLGQRHGXXQREP*DLEHLGVRSDXXENFLDHLXH 181
HLAAAA DE VEVG WDLA+LQKLE L QRH QREP D HLGVR D E+ LDHL H
Sbjct: 40176508 HLAAAAADERVEVGRWDLAQLQKLERLRQRHRRRQREPGDPGHLGVRPDSPEHLLDHLQH 40176687
Query: 182 LLASTXXXXVAXHSYDEQ 235
LA VA H YDEQ
Sbjct: 40176688 PLAGAAIVAVAVHGYDEQ 40176741
>ref|XM_463619.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 3303
Score = 134 bits (288), Expect = 2e-030
Identities = 60/79 (75%), Positives = 63/79 (79%)
Frame = -3 / +1
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
RLFVIAV CY ASK+M QVI EVF VRSDSQM +ISGF LS AMPL ETL+LLQL
Sbjct: 2437 RLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQL 2616
Query: 58 GKIPAXDFDALICGSGSEV 2
GKIP DFDALICGSGSEV
Sbjct: 2617 GKIPPTDFDALICGSGSEV 2673
Score = 125 bits (267), Expect = 2e-027
Identities = 56/77 (72%), Positives = 59/77 (76%)
Frame = +3 / -2
Query: 3 TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
TSLPLPQM ASKS GILPSCRS SVS +G+A DS NPEIL+IWESDRT L TS ITC I
Sbjct: 2672 TSLPLPQMSASKSVGGILPSCRSLSVSGSGIAVDSANPEILDIWESDRTALNTSWITCSI 2493
Query: 183 FLLAXXXXX*QXTAMTN 233
LLA *Q TAMTN
Sbjct: 2492 LLLALPSSP*QSTAMTN 2442
Score = 114 bits (243), Expect = 4e-024
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +2 / -1
Query: 2 HLAAAATDEGVEVGXWDLAELQKLECLGQRHGXXQREP*DLEHLGVRSDXXENFLDHLXH 181
HLAAAA DE VEVG WDLA+LQKLE L QRH QREP D HLGVR D E+ LDHL H
Sbjct: 2673 HLAAAAADERVEVGRWDLAQLQKLERLRQRHRRRQREPGDPGHLGVRPDSPEHLLDHLQH 2494
Query: 182 LLASTXXXXVAXHSYDEQ 235
LA VA H YDEQ
Sbjct: 2493 PLAGAAIVAVAVHGYDEQ 2440
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 134 bits (288), Expect = 2e-030
Identities = 60/79 (75%), Positives = 63/79 (79%)
Frame = -3 / -1
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
RLFVIAV CY ASK+M QVI EVF VRSDSQM +ISGF LS AMPL ETL+LLQL
Sbjct: 14624127 RLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQL 14623948
Query: 58 GKIPAXDFDALICGSGSEV 2
GKIP DFDALICGSGSEV
Sbjct: 14623947 GKIPPTDFDALICGSGSEV 14623891
Score = 125 bits (267), Expect = 2e-027
Identities = 56/77 (72%), Positives = 59/77 (76%)
Frame = +3 / +2
Query: 3 TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
TSLPLPQM ASKS GILPSCRS SVS +G+A DS NPEIL+IWESDRT L TS ITC I
Sbjct: 14623892 TSLPLPQMSASKSVGGILPSCRSLSVSGSGIAVDSANPEILDIWESDRTALNTSWITCSI 14624071
Query: 183 FLLAXXXXX*QXTAMTN 233
LLA *Q TAMTN
Sbjct: 14624072 LLLALPSSP*QSTAMTN 14624122
Score = 114 bits (243), Expect = 4e-024
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +2 / +1
Query: 2 HLAAAATDEGVEVGXWDLAELQKLECLGQRHGXXQREP*DLEHLGVRSDXXENFLDHLXH 181
HLAAAA DE VEVG WDLA+LQKLE L QRH QREP D HLGVR D E+ LDHL H
Sbjct: 14623891 HLAAAAADERVEVGRWDLAQLQKLERLRQRHRRRQREPGDPGHLGVRPDSPEHLLDHLQH 14624070
Query: 182 LLASTXXXXVAXHSYDEQ 235
LA VA H YDEQ
Sbjct: 14624071 PLAGAAIVAVAVHGYDEQ 14624124
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0678F11
Length = 154292
Score = 134 bits (288), Expect = 2e-030
Identities = 60/79 (75%), Positives = 63/79 (79%)
Frame = -3 / -1
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
RLFVIAV CY ASK+M QVI EVF VRSDSQM +ISGF LS AMPL ETL+LLQL
Sbjct: 39158 RLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQL 38979
Query: 58 GKIPAXDFDALICGSGSEV 2
GKIP DFDALICGSGSEV
Sbjct: 38978 GKIPPTDFDALICGSGSEV 38922
Score = 125 bits (267), Expect = 2e-027
Identities = 56/77 (72%), Positives = 59/77 (76%)
Frame = +3 / +1
Query: 3 TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
TSLPLPQM ASKS GILPSCRS SVS +G+A DS NPEIL+IWESDRT L TS ITC I
Sbjct: 38923 TSLPLPQMSASKSVGGILPSCRSLSVSGSGIAVDSANPEILDIWESDRTALNTSWITCSI 39102
Query: 183 FLLAXXXXX*QXTAMTN 233
LLA *Q TAMTN
Sbjct: 39103 LLLALPSSP*QSTAMTN 39153
Score = 114 bits (243), Expect = 4e-024
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +2 / +3
Query: 2 HLAAAATDEGVEVGXWDLAELQKLECLGQRHGXXQREP*DLEHLGVRSDXXENFLDHLXH 181
HLAAAA DE VEVG WDLA+LQKLE L QRH QREP D HLGVR D E+ LDHL H
Sbjct: 38922 HLAAAAADERVEVGRWDLAQLQKLERLRQRHRRRQREPGDPGHLGVRPDSPEHLLDHLQH 39101
Query: 182 LLASTXXXXVAXHSYDEQ 235
LA VA H YDEQ
Sbjct: 39102 PLAGAAIVAVAVHGYDEQ 39155
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 134 bits (288), Expect = 2e-030
Identities = 60/79 (75%), Positives = 63/79 (79%)
Frame = -3 / -1
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
RLFVIAV CY ASK+M QVI EVF VRSDSQM +ISGF LS AMPL ETL+LLQL
Sbjct: 14384365 RLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQL 14384186
Query: 58 GKIPAXDFDALICGSGSEV 2
GKIP DFDALICGSGSEV
Sbjct: 14384185 GKIPPTDFDALICGSGSEV 14384129
Score = 125 bits (267), Expect = 2e-027
Identities = 56/77 (72%), Positives = 59/77 (76%)
Frame = +3 / +3
Query: 3 TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
TSLPLPQM ASKS GILPSCRS SVS +G+A DS NPEIL+IWESDRT L TS ITC I
Sbjct: 14384130 TSLPLPQMSASKSVGGILPSCRSLSVSGSGIAVDSANPEILDIWESDRTALNTSWITCSI 14384309
Query: 183 FLLAXXXXX*QXTAMTN 233
LLA *Q TAMTN
Sbjct: 14384310 LLLALPSSP*QSTAMTN 14384360
Score = 114 bits (243), Expect = 4e-024
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +2 / +2
Query: 2 HLAAAATDEGVEVGXWDLAELQKLECLGQRHGXXQREP*DLEHLGVRSDXXENFLDHLXH 181
HLAAAA DE VEVG WDLA+LQKLE L QRH QREP D HLGVR D E+ LDHL H
Sbjct: 14384129 HLAAAAADERVEVGRWDLAQLQKLERLRQRHRRRQREPGDPGHLGVRPDSPEHLLDHLQH 14384308
Query: 182 LLASTXXXXVAXHSYDEQ 235
LA VA H YDEQ
Sbjct: 14384309 PLAGAAIVAVAVHGYDEQ 14384362
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 134 bits (288), Expect = 2e-030
Identities = 60/79 (75%), Positives = 63/79 (79%)
Frame = -3 / -1
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
RLFVIAV CY ASK+M QVI EVF VRSDSQM +ISGF LS AMPL ETL+LLQL
Sbjct: 39586086 RLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQL 39585907
Query: 58 GKIPAXDFDALICGSGSEV 2
GKIP DFDALICGSGSEV
Sbjct: 39585906 GKIPPTDFDALICGSGSEV 39585850
Score = 125 bits (267), Expect = 2e-027
Identities = 56/77 (72%), Positives = 59/77 (76%)
Frame = +3 / +2
Query: 3 TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
TSLPLPQM ASKS GILPSCRS SVS +G+A DS NPEIL+IWESDRT L TS ITC I
Sbjct: 39585851 TSLPLPQMSASKSVGGILPSCRSLSVSGSGIAVDSANPEILDIWESDRTALNTSWITCSI 39586030
Query: 183 FLLAXXXXX*QXTAMTN 233
LLA *Q TAMTN
Sbjct: 39586031 LLLALPSSP*QSTAMTN 39586081
Score = 114 bits (243), Expect = 4e-024
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +2 / +1
Query: 2 HLAAAATDEGVEVGXWDLAELQKLECLGQRHGXXQREP*DLEHLGVRSDXXENFLDHLXH 181
HLAAAA DE VEVG WDLA+LQKLE L QRH QREP D HLGVR D E+ LDHL H
Sbjct: 39585850 HLAAAAADERVEVGRWDLAQLQKLERLRQRHRRRQREPGDPGHLGVRPDSPEHLLDHLQH 39586029
Query: 182 LLASTXXXXVAXHSYDEQ 235
LA VA H YDEQ
Sbjct: 39586030 PLAGAAIVAVAVHGYDEQ 39586083
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 134 bits (288), Expect = 2e-030
Identities = 60/79 (75%), Positives = 63/79 (79%)
Frame = -3 / -1
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
RLFVIAV CY ASK+M QVI EVF VRSDSQM +ISGF LS AMPL ETL+LLQL
Sbjct: 40096074 RLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQL 40095895
Query: 58 GKIPAXDFDALICGSGSEV 2
GKIP DFDALICGSGSEV
Sbjct: 40095894 GKIPPTDFDALICGSGSEV 40095838
Score = 125 bits (267), Expect = 2e-027
Identities = 56/77 (72%), Positives = 59/77 (76%)
Frame = +3 / +2
Query: 3 TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
TSLPLPQM ASKS GILPSCRS SVS +G+A DS NPEIL+IWESDRT L TS ITC I
Sbjct: 40095839 TSLPLPQMSASKSVGGILPSCRSLSVSGSGIAVDSANPEILDIWESDRTALNTSWITCSI 40096018
Query: 183 FLLAXXXXX*QXTAMTN 233
LLA *Q TAMTN
Sbjct: 40096019 LLLALPSSP*QSTAMTN 40096069
Score = 114 bits (243), Expect = 4e-024
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +2 / +1
Query: 2 HLAAAATDEGVEVGXWDLAELQKLECLGQRHGXXQREP*DLEHLGVRSDXXENFLDHLXH 181
HLAAAA DE VEVG WDLA+LQKLE L QRH QREP D HLGVR D E+ LDHL H
Sbjct: 40095838 HLAAAAADERVEVGRWDLAQLQKLERLRQRHRRRQREPGDPGHLGVRPDSPEHLLDHLQH 40096017
Query: 182 LLASTXXXXVAXHSYDEQ 235
LA VA H YDEQ
Sbjct: 40096018 PLAGAAIVAVAVHGYDEQ 40096071
>dbj|D45890.1|RICSPS1 Oryza sativa DNA for sucrose phosphate synthase, complete cds
Length = 9181
Score = 133 bits (284), Expect = 8e-030
Identities = 59/79 (74%), Positives = 62/79 (78%)
Frame = -3 / +3
Query: 238 RLFVIAVXCYXXXXXASKKMXQVIXEVFXXVRSDSQMFKISGFTLSXAMPLSETLQLLQL 59
RLFVIAV CY ASK+M QVI EVF VRSDSQM +ISGF LS MPL ETL+LLQL
Sbjct: 7263 RLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTXMPLPETLKLLQL 7442
Query: 58 GKIPAXDFDALICGSGSEV 2
GKIP DFDALICGSGSEV
Sbjct: 7443 GKIPPTDFDALICGSGSEV 7499
Score = 123 bits (263), Expect = 6e-027
Identities = 55/77 (71%), Positives = 58/77 (75%)
Frame = +3 / -1
Query: 3 TSLPLPQMRASKSXAGILPSCRSWSVSDNGMAXDSVNPEILNIWESDRTXLKTSXITCXI 182
TSLPLPQM ASKS GILPSCRS SVS +G+ DS NPEIL+IWESDRT L TS ITC I
Sbjct: 7498 TSLPLPQMSASKSVGGILPSCRSLSVSGSGIXVDSANPEILDIWESDRTALNTSWITCSI 7319
Query: 183 FLLAXXXXX*QXTAMTN 233
LLA *Q TAMTN
Sbjct: 7318 LLLALPSSP*QSTAMTN 7268
Score = 114 bits (244), Expect = 3e-024
Identities = 51/78 (65%), Positives = 53/78 (67%)
Frame = +2 / -3
Query: 2 HLAAAATDEGVEVGXWDLAELQKLECLGQRHGXXQREP*DLEHLGVRSDXXENFLDHLXH 181
HLAAAA DE VEVG WDLA+LQKLE L QRH QREP D HLGVR D E+ LDHL H
Sbjct: 7499 HLAAAAADERVEVGRWDLAQLQKLERLRQRHXRRQREPGDPGHLGVRPDSPEHLLDHLQH 7320
Query: 182 LLASTXXXXVAXHSYDEQ 235
LA VA H YDEQ
Sbjct: 7319 PLAGAAIVAVAVHGYDEQ 7266
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,021,827,320
Number of Sequences: 438736
Number of extensions: 7252936
Number of successful extensions: 55604
Number of sequences better than 1.0e-020: 17
length of database: 933,473,305
effective HSP length: 56
effective length of database: 908,904,089
effective search space used: 44536300361
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)