TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAM14e11.yg.2.1
(197 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AG213996.1| Oryza sativa (japonica cultivar-group) DNA,... 149 2e-034
gb|AC091090.1|AC091090 Oryza sativa (japonica cultivar-grou... 149 2e-034
dbj|AK121341.1| Oryza sativa (japonica cultivar-group) cDNA... 149 2e-034
gb|AACV01002933.1| Oryza sativa (japonica cultivar-group) c... 149 2e-034
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 149 2e-034
ref|XM_463619.1| Oryza sativa (japonica cultivar-group), p... 149 2e-034
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 149 2e-034
dbj|AP003437.3| Oryza sativa (japonica cultivar-group) geno... 149 2e-034
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 149 2e-034
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 149 2e-034
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 149 2e-034
dbj|AG205918.1| Oryza sativa (japonica cultivar-group) DNA,... 148 3e-034
dbj|D45890.1|RICSPS1 Oryza sativa DNA for sucrose phosphate... 147 4e-034
gb|CG408661.1|CG408661 Ds353 Ds insertion lines Oryza sativ... 115 1e-029
dbj|AK101676.1| Oryza sativa (japonica cultivar-group) cDNA... 123 4e-027
dbj|AP004041.2| Oryza sativa (japonica cultivar-group) geno... 123 4e-027
gb|AACV01017983.1| Oryza sativa (japonica cultivar-group) c... 123 4e-027
dbj|BA000044.2| Oryza sativa (japonica cultivar-group) geno... 123 4e-027
ref|XM_481429.1| Oryza sativa (japonica cultivar-group), mRNA 123 4e-027
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 123 4e-027
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 123 4e-027
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 123 4e-027
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 123 4e-027
gb|AY360393.2| Oryza sativa (japonica cultivar-group) chrom... 123 4e-027
ref|NT_107144.1| Oryza sativa (japonica cultivar-group) 118 2e-025
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 118 2e-025
gb|AC135258.2| Oryza sativa (japonica cultivar-group) chrom... 118 2e-025
gb|AC147811.2| Oryza sativa (japonica cultivar-group) chrom... 118 2e-025
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 118 2e-025
gb|AQ364008.2|AQ364008 nbxb0060E04r CUGI Rice BAC Library O... 115 1e-024
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 115 1e-024
dbj|AP003523.3| Oryza sativa (japonica cultivar-group) geno... 115 1e-024
dbj|AP003568.3| Oryza sativa (japonica cultivar-group) geno... 115 1e-024
gb|AACV01014670.1| Oryza sativa (japonica cultivar-group) c... 115 1e-024
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 115 1e-024
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 115 1e-024
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 115 1e-024
dbj|AG024164.1| Oryza sativa (japonica cultivar-group) DNA,... 110 4e-024
dbj|AG023731.1| Oryza sativa (japonica cultivar-group) DNA,... 107 2e-023
dbj|AK065273.1| Oryza sativa (japonica cultivar-group) cDNA... 111 3e-023
dbj|AK098898.1| Oryza sativa (japonica cultivar-group) cDNA... 111 3e-023
dbj|AK121486.1| Oryza sativa (japonica cultivar-group) cDNA... 111 3e-023
dbj|AP004066.2| Oryza sativa (japonica cultivar-group) geno... 111 3e-023
gb|AACV01003496.1| Oryza sativa (japonica cultivar-group) c... 111 3e-023
ref|XM_464358.1| Oryza sativa (japonica cultivar-group), mRNA 111 3e-023
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 111 3e-023
ref|XM_506734.1| PREDICTED Oryza sativa (japonica cultivar-... 111 3e-023
ref|XM_506735.1| PREDICTED Oryza sativa (japonica cultivar-... 111 3e-023
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 111 3e-023
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 111 3e-023
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 111 3e-023
>dbj|AG213996.1| Oryza sativa (japonica cultivar-group) DNA, clone:T12049T, 3'
flanking sequence of Tos17 insertion in rice strain
ND9050, genomic survey sequence
Length = 513
Score = 149 bits (319), Expect = 2e-034
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDA+ELVITSTRQEID
Sbjct: 198 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEID 377
Query: 16 EQWGL 2
EQWGL
Sbjct: 378 EQWGL 392
Score = 107 bits (228), Expect = 1e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / -3
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 391 SPHCSSISCLVLVMTSSAASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 212
Query: 183 VSTMG 197
V T+G
Sbjct: 211 VRTIG 197
Score = 106 bits (227), Expect = 2e-022
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -1 / +2
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+++KAGD**
Sbjct: 203 GSHRSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCSGACHNEYKAGD**A 382
Query: 11 VG 6
+G
Sbjct: 383 MG 388
>gb|AC091090.1|AC091090 Oryza sativa (japonica cultivar-group) chromosome 1 clone P0678F11, ***
SEQUENCING IN PROGRESS ***, 3 ordered pieces
Length = 155574
Score = 149 bits (319), Expect = 2e-034
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDA+ELVITSTRQEID
Sbjct: 114269 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEID 114448
Query: 16 EQWGL 2
EQWGL
Sbjct: 114449 EQWGL 114463
Score = 107 bits (228), Expect = 1e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / -1
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 114462 SPHCSSISCLVLVMTSSAASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 114283
Query: 183 VSTMG 197
V T+G
Sbjct: 114282 VRTIG 114268
Score = 106 bits (227), Expect = 2e-022
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -1 / +1
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+++KAGD**
Sbjct: 114274 GSHRSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCSGACHNEYKAGD**A 114453
Query: 11 VG 6
+G
Sbjct: 114454 MG 114459
>dbj|AK121341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120M11, full
insert sequence
Length = 3825
Score = 149 bits (319), Expect = 2e-034
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDA+ELVITSTRQEID
Sbjct: 1300 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEID 1479
Query: 16 EQWGL 2
EQWGL
Sbjct: 1480 EQWGL 1494
Score = 107 bits (228), Expect = 1e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / -2
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 1493 SPHCSSISCLVLVMTSSAASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 1314
Query: 183 VSTMG 197
V T+G
Sbjct: 1313 VRTIG 1299
Score = 106 bits (227), Expect = 2e-022
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -1 / +3
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+++KAGD**
Sbjct: 1305 GSHRSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCSGACHNEYKAGD**A 1484
Query: 11 VG 6
+G
Sbjct: 1485 MG 1490
>gb|AACV01002933.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002933, whole
genome shotgun sequence
Length = 31042
Score = 149 bits (319), Expect = 2e-034
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDA+ELVITSTRQEID
Sbjct: 9521 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEID 9700
Query: 16 EQWGL 2
EQWGL
Sbjct: 9701 EQWGL 9715
Score = 107 bits (228), Expect = 1e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / -2
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 9714 SPHCSSISCLVLVMTSSAASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 9535
Query: 183 VSTMG 197
V T+G
Sbjct: 9534 VRTIG 9520
Score = 106 bits (227), Expect = 2e-022
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -1 / +1
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+++KAGD**
Sbjct: 9526 GSHRSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCSGACHNEYKAGD**A 9705
Query: 11 VG 6
+G
Sbjct: 9706 MG 9711
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 149 bits (319), Expect = 2e-034
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -2 / -1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDA+ELVITSTRQEID
Sbjct: 40178892 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEID 40178713
Query: 16 EQWGL 2
EQWGL
Sbjct: 40178712 EQWGL 40178698
Score = 107 bits (228), Expect = 1e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / +2
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 40178699 SPHCSSISCLVLVMTSSAASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 40178878
Query: 183 VSTMG 197
V T+G
Sbjct: 40178879 VRTIG 40178893
Score = 106 bits (227), Expect = 2e-022
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -1 / -3
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+++KAGD**
Sbjct: 40178887 GSHRSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCSGACHNEYKAGD**A 40178708
Query: 11 VG 6
+G
Sbjct: 40178707 MG 40178702
>ref|XM_463619.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 3303
Score = 149 bits (319), Expect = 2e-034
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDA+ELVITSTRQEID
Sbjct: 1117 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEID 1296
Query: 16 EQWGL 2
EQWGL
Sbjct: 1297 EQWGL 1311
Score = 107 bits (228), Expect = 1e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / -2
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 1310 SPHCSSISCLVLVMTSSAASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 1131
Query: 183 VSTMG 197
V T+G
Sbjct: 1130 VRTIG 1116
Score = 106 bits (227), Expect = 2e-022
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -1 / +3
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+++KAGD**
Sbjct: 1122 GSHRSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCSGACHNEYKAGD**A 1301
Query: 11 VG 6
+G
Sbjct: 1302 MG 1307
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 149 bits (319), Expect = 2e-034
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -2 / -1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDA+ELVITSTRQEID
Sbjct: 14626275 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEID 14626096
Query: 16 EQWGL 2
EQWGL
Sbjct: 14626095 EQWGL 14626081
Score = 107 bits (228), Expect = 1e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / +2
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 14626082 SPHCSSISCLVLVMTSSAASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 14626261
Query: 183 VSTMG 197
V T+G
Sbjct: 14626262 VRTIG 14626276
Score = 106 bits (227), Expect = 2e-022
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -1 / -3
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+++KAGD**
Sbjct: 14626270 GSHRSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCSGACHNEYKAGD**A 14626091
Query: 11 VG 6
+G
Sbjct: 14626090 MG 14626085
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0678F11
Length = 154292
Score = 149 bits (319), Expect = 2e-034
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -2 / -1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDA+ELVITSTRQEID
Sbjct: 41306 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEID 41127
Query: 16 EQWGL 2
EQWGL
Sbjct: 41126 EQWGL 41112
Score = 107 bits (228), Expect = 1e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / +1
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 41113 SPHCSSISCLVLVMTSSAASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 41292
Query: 183 VSTMG 197
V T+G
Sbjct: 41293 VRTIG 41307
Score = 106 bits (227), Expect = 2e-022
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -1 / -3
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+++KAGD**
Sbjct: 41301 GSHRSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCSGACHNEYKAGD**A 41122
Query: 11 VG 6
+G
Sbjct: 41121 MG 41116
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 149 bits (319), Expect = 2e-034
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -2 / -1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDA+ELVITSTRQEID
Sbjct: 14386513 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEID 14386334
Query: 16 EQWGL 2
EQWGL
Sbjct: 14386333 EQWGL 14386319
Score = 107 bits (228), Expect = 1e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / +3
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 14386320 SPHCSSISCLVLVMTSSAASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 14386499
Query: 183 VSTMG 197
V T+G
Sbjct: 14386500 VRTIG 14386514
Score = 106 bits (227), Expect = 2e-022
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -1 / -3
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+++KAGD**
Sbjct: 14386508 GSHRSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCSGACHNEYKAGD**A 14386329
Query: 11 VG 6
+G
Sbjct: 14386328 MG 14386323
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 149 bits (319), Expect = 2e-034
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -2 / -1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDA+ELVITSTRQEID
Sbjct: 39588234 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEID 39588055
Query: 16 EQWGL 2
EQWGL
Sbjct: 39588054 EQWGL 39588040
Score = 107 bits (228), Expect = 1e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / +2
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 39588041 SPHCSSISCLVLVMTSSAASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 39588220
Query: 183 VSTMG 197
V T+G
Sbjct: 39588221 VRTIG 39588235
Score = 106 bits (227), Expect = 2e-022
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -1 / -3
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+++KAGD**
Sbjct: 39588229 GSHRSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCSGACHNEYKAGD**A 39588050
Query: 11 VG 6
+G
Sbjct: 39588049 MG 39588044
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 149 bits (319), Expect = 2e-034
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -2 / -1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDA+ELVITSTRQEID
Sbjct: 40098222 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEID 40098043
Query: 16 EQWGL 2
EQWGL
Sbjct: 40098042 EQWGL 40098028
Score = 107 bits (228), Expect = 1e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / +2
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 40098029 SPHCSSISCLVLVMTSSAASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 40098208
Query: 183 VSTMG 197
V T+G
Sbjct: 40098209 VRTIG 40098223
Score = 106 bits (227), Expect = 2e-022
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -1 / -3
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+++KAGD**
Sbjct: 40098217 GSHRSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCSGACHNEYKAGD**A 40098038
Query: 11 VG 6
+G
Sbjct: 40098037 MG 40098032
>dbj|AG205918.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE7015_0_103_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE7015, genomic survey sequence
Length = 627
Score = 148 bits (317), Expect = 3e-034
Identities = 63/65 (96%), Positives = 64/65 (98%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTR EID
Sbjct: 310 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRHEID 489
Query: 16 EQWGL 2
EQWGL
Sbjct: 490 EQWGL 504
Score = 106 bits (227), Expect = 2e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / -2
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 503 SPHCSSISCLVLVMTSSDASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 324
Query: 183 VSTMG 197
V T+G
Sbjct: 323 VRTIG 309
Score = 104 bits (222), Expect = 8e-022
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = -1 / +3
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC+ ACH+++KA D**
Sbjct: 315 GSHRSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCIGACHNEYKA*D**A 494
Query: 11 VG 6
+G
Sbjct: 495 MG 500
>dbj|D45890.1|RICSPS1 Oryza sativa DNA for sucrose phosphate synthase, complete cds
Length = 9181
Score = 147 bits (316), Expect = 4e-034
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMVLTGHSLGRNKLEQI+KQGRMSKEE+DSTYKIMRRIEGEELALDA+ELVITSTRQEID
Sbjct: 5108 PMVLTGHSLGRNKLEQIMKQGRMSKEEMDSTYKIMRRIEGEELALDAAELVITSTRQEID 5287
Query: 16 EQWGL 2
EQWGL
Sbjct: 5288 EQWGL 5302
Score = 107 bits (229), Expect = 8e-023
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = -1 / +1
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHHQHKAGD**T 12
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+++KAGD**
Sbjct: 5113 GSHRSFTWEEQAGADHEARAHVEGGDGLNLQDHEAH*G*GAGLGCSGACHNEYKAGD**A 5292
Query: 11 VG 6
+G
Sbjct: 5293 MG 5298
Score = 107 bits (228), Expect = 1e-022
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3 / -2
Query: 3 NPHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*P 182
+PHCSSISCLVLVMT +RLMIL VESISS DMRPCF ICSSLFLPSE*P
Sbjct: 5301 SPHCSSISCLVLVMTSSAASKASSSPSMRLMIL*VESISSFDMRPCFMICSSLFLPSE*P 5122
Query: 183 VSTMG 197
V T+G
Sbjct: 5121 VRTIG 5107
>gb|CG408661.1|CG408661 Ds353 Ds insertion lines Oryza sativa (japonica cultivar-group)
genomic, DNA sequence
Length = 271
Score = 115 bits (246), Expect(2) = 1e-029
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVIT 38
PMVLT HSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEGEELALDA+ELVIT
Sbjct: 33 PMVLTRHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVIT 191
Score = 90.9 bits (192), Expect(2) = 2e-021
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = -1 / +2
Query: 191 GAHWSLTWEEQAGANPEARAHVQGGDRFNIQDHEAYRG*GAGPGCVRACHH 39
G+H S TWEEQAGA+ EARAHV+GGD N+QDHEA+ G*GAG GC ACH+
Sbjct: 38 GSHPSFTWEEQAGADHEARAHVEGGD*LNLQDHEAH*G*GAGLGCSGACHN 190
Score = 32.7 bits (65), Expect(2) = 1e-029
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2 / +1
Query: 37 STRQEIDEQWGL 2
STRQEIDEQWGL
Sbjct: 193 STRQEIDEQWGL 228
Score = 27.2 bits (53), Expect(2) = 2e-021
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -3 / +2
Query: 33 QGRRLMNSGDC 1
QGRRLM++GDC
Sbjct: 197 QGRRLMSNGDC 229
>dbj|AK101676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F14, full
insert sequence
Length = 3858
Score = 123 bits (264), Expect = 4e-027
Identities = 48/65 (73%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+ TGHSLGR+KLEQ+LKQGR +++EI++ YKIMRRIE EEL LDASE++ITSTRQEI+
Sbjct: 1246 PMIFTGHSLGRDKLEQLLKQGRQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIE 1425
Query: 16 EQWGL 2
+QWGL
Sbjct: 1426 QQWGL 1440
>dbj|AP004041.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1115_A07
Length = 165126
Score = 123 bits (264), Expect = 4e-027
Identities = 48/65 (73%), Positives = 60/65 (92%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+ TGHSLGR+KLEQ+LKQGR +++EI++ YKIMRRIE EEL LDASE++ITSTRQEI+
Sbjct: 13710 PMIFTGHSLGRDKLEQLLKQGRQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIE 13889
Query: 16 EQWGL 2
+QWGL
Sbjct: 13890 QQWGL 13904
>gb|AACV01017983.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017983, whole
genome shotgun sequence
Length = 17582
Score = 123 bits (264), Expect = 4e-027
Identities = 48/65 (73%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+ TGHSLGR+KLEQ+LKQGR +++EI++ YKIMRRIE EEL LDASE++ITSTRQEI+
Sbjct: 4207 PMIFTGHSLGRDKLEQLLKQGRQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIE 4386
Query: 16 EQWGL 2
+QWGL
Sbjct: 4387 QQWGL 4401
>dbj|BA000044.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
centromeric region
Length = 1992366
Score = 123 bits (264), Expect = 4e-027
Identities = 48/65 (73%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+ TGHSLGR+KLEQ+LKQGR +++EI++ YKIMRRIE EEL LDASE++ITSTRQEI+
Sbjct: 461176 PMIFTGHSLGRDKLEQLLKQGRQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIE 461355
Query: 16 EQWGL 2
+QWGL
Sbjct: 461356 QQWGL 461370
>ref|XM_481429.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3201
Score = 123 bits (264), Expect = 4e-027
Identities = 48/65 (73%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+ TGHSLGR+KLEQ+LKQGR +++EI++ YKIMRRIE EEL LDASE++ITSTRQEI+
Sbjct: 1051 PMIFTGHSLGRDKLEQLLKQGRQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIE 1230
Query: 16 EQWGL 2
+QWGL
Sbjct: 1231 QQWGL 1245
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 123 bits (264), Expect = 4e-027
Identities = 48/65 (73%), Positives = 60/65 (92%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+ TGHSLGR+KLEQ+LKQGR +++EI++ YKIMRRIE EEL LDASE++ITSTRQEI+
Sbjct: 12169997 PMIFTGHSLGRDKLEQLLKQGRQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIE 12170176
Query: 16 EQWGL 2
+QWGL
Sbjct: 12170177 QQWGL 12170191
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 123 bits (264), Expect = 4e-027
Identities = 48/65 (73%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+ TGHSLGR+KLEQ+LKQGR +++EI++ YKIMRRIE EEL LDASE++ITSTRQEI+
Sbjct: 4160326 PMIFTGHSLGRDKLEQLLKQGRQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIE 4160505
Query: 16 EQWGL 2
+QWGL
Sbjct: 4160506 QQWGL 4160520
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 123 bits (264), Expect = 4e-027
Identities = 48/65 (73%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+ TGHSLGR+KLEQ+LKQGR +++EI++ YKIMRRIE EEL LDASE++ITSTRQEI+
Sbjct: 11762332 PMIFTGHSLGRDKLEQLLKQGRQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIE 11762511
Query: 16 EQWGL 2
+QWGL
Sbjct: 11762512 QQWGL 11762526
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 123 bits (264), Expect = 4e-027
Identities = 48/65 (73%), Positives = 60/65 (92%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+ TGHSLGR+KLEQ+LKQGR +++EI++ YKIMRRIE EEL LDASE++ITSTRQEI+
Sbjct: 12409681 PMIFTGHSLGRDKLEQLLKQGRQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIE 12409860
Query: 16 EQWGL 2
+QWGL
Sbjct: 12409861 QQWGL 12409875
>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16,
complete sequence
Length = 164501
Score = 123 bits (264), Expect = 4e-027
Identities = 48/65 (73%), Positives = 60/65 (92%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM+ TGHSLGR+KLEQ+LKQGR +++EI++ YKIMRRIE EEL LDASE++ITSTRQEI+
Sbjct: 78996 PMIFTGHSLGRDKLEQLLKQGRQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIE 79175
Query: 16 EQWGL 2
+QWGL
Sbjct: 79176 QQWGL 79190
>ref|NT_107144.1| Oryza sativa (japonica cultivar-group)
Length = 965832
Score = 118 bits (252), Expect = 2e-025
Identities = 47/65 (72%), Positives = 56/65 (86%)
Frame = -2 / -2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV+TGHSLGRNKLEQ+LK GRM + EI TYKI RRIE EE LDA+++V+TST+QEI+
Sbjct: 964757 PMVMTGHSLGRNKLEQLLKLGRMPRAEIQGTYKIARRIEAEETGLDAADMVVTSTKQEIE 964578
Query: 16 EQWGL 2
EQWGL
Sbjct: 964577 EQWGL 964563
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 118 bits (252), Expect = 2e-025
Identities = 47/65 (72%), Positives = 56/65 (86%)
Frame = -2 / -3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV+TGHSLGRNKLEQ+LK GRM + EI TYKI RRIE EE LDA+++V+TST+QEI+
Sbjct: 7181479 PMVMTGHSLGRNKLEQLLKLGRMPRAEIQGTYKIARRIEAEETGLDAADMVVTSTKQEIE 7181300
Query: 16 EQWGL 2
EQWGL
Sbjct: 7181299 EQWGL 7181285
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0097K08 map C827S, complete sequence
Length = 137870
Score = 118 bits (252), Expect = 2e-025
Identities = 47/65 (72%), Positives = 56/65 (86%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV+TGHSLGRNKLEQ+LK GRM + EI TYKI RRIE EE LDA+++V+TST+QEI+
Sbjct: 1076 PMVMTGHSLGRNKLEQLLKLGRMPRAEIQGTYKIARRIEAEETGLDAADMVVTSTKQEIE 1255
Query: 16 EQWGL 2
EQWGL
Sbjct: 1256 EQWGL 1270
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0026P08 map near C827S, complete sequence
Length = 148676
Score = 118 bits (252), Expect = 2e-025
Identities = 47/65 (72%), Positives = 56/65 (86%)
Frame = -2 / -1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV+TGHSLGRNKLEQ+LK GRM + EI TYKI RRIE EE LDA+++V+TST+QEI+
Sbjct: 94622 PMVMTGHSLGRNKLEQLLKLGRMPRAEIQGTYKIARRIEAEETGLDAADMVVTSTKQEIE 94443
Query: 16 EQWGL 2
EQWGL
Sbjct: 94442 EQWGL 94428
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 118 bits (252), Expect = 2e-025
Identities = 47/65 (72%), Positives = 56/65 (86%)
Frame = -2 / -3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV+TGHSLGRNKLEQ+LK GRM + EI TYKI RRIE EE LDA+++V+TST+QEI+
Sbjct: 7247373 PMVMTGHSLGRNKLEQLLKLGRMPRAEIQGTYKIARRIEAEETGLDAADMVVTSTKQEIE 7247194
Query: 16 EQWGL 2
EQWGL
Sbjct: 7247193 EQWGL 7247179
>gb|AQ364008.2|AQ364008 nbxb0060E04r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0060E04r, DNA sequence
Length = 481
Score = 115 bits (246), Expect = 1e-024
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV TGH LG++KLE++LKQGR ++E+I+ TYKIM RIE EELALDASE+VI STRQEI+
Sbjct: 269 PMVFTGHFLGKDKLEELLKQGRQTREQINMTYKIMCRIEAEELALDASEIVIASTRQEIE 448
Query: 16 EQWGL 2
EQW L
Sbjct: 449 EQWNL 463
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 115 bits (246), Expect = 1e-024
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = -2 / -1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV TGH LG++KLE++LKQGR ++E+I+ TYKIM RIE EELALDASE+VI STRQEI+
Sbjct: 3327992 PMVFTGHFLGKDKLEELLKQGRQTREQINMTYKIMCRIEAEELALDASEIVIASTRQEIE 3327813
Query: 16 EQWGL 2
EQW L
Sbjct: 3327812 EQWNL 3327798
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0416A11
Length = 171519
Score = 115 bits (246), Expect = 1e-024
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = -2 / -1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV TGH LG++KLE++LKQGR ++E+I+ TYKIM RIE EELALDASE+VI STRQEI+
Sbjct: 144711 PMVFTGHFLGKDKLEELLKQGRQTREQINMTYKIMCRIEAEELALDASEIVIASTRQEIE 144532
Query: 16 EQWGL 2
EQW L
Sbjct: 144531 EQWNL 144517
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0017B12
Length = 157424
Score = 115 bits (246), Expect = 1e-024
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = -2 / -2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV TGH LG++KLE++LKQGR ++E+I+ TYKIM RIE EELALDASE+VI STRQEI+
Sbjct: 17605 PMVFTGHFLGKDKLEELLKQGRQTREQINMTYKIMCRIEAEELALDASEIVIASTRQEIE 17426
Query: 16 EQWGL 2
EQW L
Sbjct: 17425 EQWNL 17411
>gb|AACV01014670.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014670, whole
genome shotgun sequence
Length = 47074
Score = 115 bits (246), Expect = 1e-024
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = -2 / -1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV TGH LG++KLE++LKQGR ++E+I+ TYKIM RIE EELALDASE+VI STRQEI+
Sbjct: 13285 PMVFTGHFLGKDKLEELLKQGRQTREQINMTYKIMCRIEAEELALDASEIVIASTRQEIE 13106
Query: 16 EQWGL 2
EQW L
Sbjct: 13105 EQWNL 13091
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 115 bits (246), Expect = 1e-024
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = -2 / -1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV TGH LG++KLE++LKQGR ++E+I+ TYKIM RIE EELALDASE+VI STRQEI+
Sbjct: 7204268 PMVFTGHFLGKDKLEELLKQGRQTREQINMTYKIMCRIEAEELALDASEIVIASTRQEIE 7204089
Query: 16 EQWGL 2
EQW L
Sbjct: 7204088 EQWNL 7204074
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 115 bits (246), Expect = 1e-024
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = -2 / -3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV TGH LG++KLE++LKQGR ++E+I+ TYKIM RIE EELALDASE+VI STRQEI+
Sbjct: 24903005 PMVFTGHFLGKDKLEELLKQGRQTREQINMTYKIMCRIEAEELALDASEIVIASTRQEIE 24902826
Query: 16 EQWGL 2
EQW L
Sbjct: 24902825 EQWNL 24902811
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 115 bits (246), Expect = 1e-024
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = -2 / -2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PMV TGH LG++KLE++LKQGR ++E+I+ TYKIM RIE EELALDASE+VI STRQEI+
Sbjct: 25862507 PMVFTGHFLGKDKLEELLKQGRQTREQINMTYKIMCRIEAEELALDASEIVIASTRQEIE 25862328
Query: 16 EQWGL 2
EQW L
Sbjct: 25862327 EQWNL 25862313
>dbj|AG024164.1| Oryza sativa (japonica cultivar-group) DNA, clone:ND3060_0_102_1A,
3' flanking sequence of Tos17 insertion in rice strain
ND3060, genomic survey sequence
Length = 729
Score = 110 bits (235), Expect(2) = 4e-024
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASEL 47
PMVLTGHSLGRNKLEQI+KQGRMS EEIDSTYKIMRRIEGEELALDA+EL
Sbjct: 404 PMVLTGHSLGRNKLEQIMKQGRMSXEEIDSTYKIMRRIEGEELALDAAEL 553
Score = 20.3 bits (38), Expect(2) = 4e-024
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -2 / +1
Query: 28 QEIDEQWG 5
QEID+ WG
Sbjct: 574 QEIDDAWG 597
>dbj|AG023731.1| Oryza sativa (japonica cultivar-group) DNA, clone:ND2003_0_102_1A,
3' flanking sequence of Tos17 insertion in rice strain
ND2003, genomic survey sequence
Length = 481
Score = 107 bits (228), Expect(2) = 2e-023
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASE 50
PMVLTGHSLGRNKLEQI+KQGRMSKEEIDSTYKIMRRIEG ELALDA++
Sbjct: 311 PMVLTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGXELALDAAD 457
Score = 20.3 bits (38), Expect(2) = 2e-023
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 64 LDASELVITSTRQ 26
L S L+ITSTRQ
Sbjct: 442 LGCSGLLITSTRQ 480
>dbj|AK065273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L08, full
insert sequence
Length = 3326
Score = 111 bits (236), Expect = 3e-023
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM TGH LG++KLE +LKQGR S+E+I+ TYKIM RIE EEL+LDASE+VI STRQEI+
Sbjct: 1089 PMAFTGHFLGKDKLEGLLKQGRHSREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIE 1268
Query: 16 EQWGL 2
EQW L
Sbjct: 1269 EQWNL 1283
>dbj|AK098898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B04, full
insert sequence
Length = 3259
Score = 111 bits (236), Expect = 3e-023
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM TGH LG++KLE +LKQGR S+E+I+ TYKIM RIE EEL+LDASE+VI STRQEI+
Sbjct: 1062 PMAFTGHFLGKDKLEGLLKQGRHSREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIE 1241
Query: 16 EQWGL 2
EQW L
Sbjct: 1242 EQWNL 1256
>dbj|AK121486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150H16, full
insert sequence
Length = 3489
Score = 111 bits (236), Expect = 3e-023
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM TGH LG++KLE +LKQGR S+E+I+ TYKIM RIE EEL+LDASE+VI STRQEI+
Sbjct: 1123 PMAFTGHFLGKDKLEGLLKQGRHSREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIE 1302
Query: 16 EQWGL 2
EQW L
Sbjct: 1303 EQWNL 1317
>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1572_F02
Length = 93626
Score = 111 bits (236), Expect = 3e-023
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM TGH LG++KLE +LKQGR S+E+I+ TYKIM RIE EEL+LDASE+VI STRQEI+
Sbjct: 84276 PMAFTGHFLGKDKLEGLLKQGRHSREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIE 84455
Query: 16 EQWGL 2
EQW L
Sbjct: 84456 EQWNL 84470
>gb|AACV01003496.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003496, whole
genome shotgun sequence
Length = 32401
Score = 111 bits (236), Expect = 3e-023
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -2 / -2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM TGH LG++KLE +LKQGR S+E+I+ TYKIM RIE EEL+LDASE+VI STRQEI+
Sbjct: 5460 PMAFTGHFLGKDKLEGLLKQGRHSREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIE 5281
Query: 16 EQWGL 2
EQW L
Sbjct: 5280 EQWNL 5266
>ref|XM_464358.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3259
Score = 111 bits (236), Expect = 3e-023
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM TGH LG++KLE +LKQGR S+E+I+ TYKIM RIE EEL+LDASE+VI STRQEI+
Sbjct: 1062 PMAFTGHFLGKDKLEGLLKQGRHSREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIE 1241
Query: 16 EQWGL 2
EQW L
Sbjct: 1242 EQWNL 1256
>ref|NT_107177.1| Oryza sativa (japonica cultivar-group)
Length = 1341590
Score = 111 bits (236), Expect = 3e-023
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -2 / +3
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM TGH LG++KLE +LKQGR S+E+I+ TYKIM RIE EEL+LDASE+VI STRQEI+
Sbjct: 84276 PMAFTGHFLGKDKLEGLLKQGRHSREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIE 84455
Query: 16 EQWGL 2
EQW L
Sbjct: 84456 EQWNL 84470
>ref|XM_506734.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1572_F02.13 mRNA
Length = 3490
Score = 111 bits (236), Expect = 3e-023
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -2 / +2
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM TGH LG++KLE +LKQGR S+E+I+ TYKIM RIE EEL+LDASE+VI STRQEI+
Sbjct: 1124 PMAFTGHFLGKDKLEGLLKQGRHSREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIE 1303
Query: 16 EQWGL 2
EQW L
Sbjct: 1304 EQWNL 1318
>ref|XM_506735.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1572_F02.13 mRNA
Length = 3327
Score = 111 bits (236), Expect = 3e-023
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM TGH LG++KLE +LKQGR S+E+I+ TYKIM RIE EEL+LDASE+VI STRQEI+
Sbjct: 1090 PMAFTGHFLGKDKLEGLLKQGRHSREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIE 1269
Query: 16 EQWGL 2
EQW L
Sbjct: 1270 EQWNL 1284
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 111 bits (236), Expect = 3e-023
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM TGH LG++KLE +LKQGR S+E+I+ TYKIM RIE EEL+LDASE+VI STRQEI+
Sbjct: 4795483 PMAFTGHFLGKDKLEGLLKQGRHSREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIE 4795662
Query: 16 EQWGL 2
EQW L
Sbjct: 4795663 EQWNL 4795677
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 111 bits (236), Expect = 3e-023
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -2 / +1
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
PM TGH LG++KLE +LKQGR S+E+I+ TYKIM RIE EEL+LDASE+VI STRQEI+
Sbjct: 4795483 PMAFTGHFLGKDKLEGLLKQGRHSREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIE 4795662
Query: 16 EQWGL 2
EQW L
Sbjct: 4795663 EQWNL 4795677
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,428,628,087
Number of Sequences: 438736
Number of extensions: 18218998
Number of successful extensions: 320711
Number of sequences better than 1.0e-020: 76
length of database: 933,473,305
effective HSP length: 52
effective length of database: 910,659,033
effective search space used: 11838567429
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)