TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF1g01.yg.2.1
(335 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_550490.1| Oryza sativa (japonica cultivar-group), mRNA 209 8e-053
gb|CB671521.1|CB671521 OSJNEe05C09.f OSJNEe Oryza sativa (j... 189 1e-046
dbj|AK069531.1| Oryza sativa (japonica cultivar-group) cDNA... 189 1e-046
ref|NM_187562.1| Oryza sativa (japonica cultivar-group), p... 189 1e-046
gb|AY324384.1| Oryza sativa (japonica cultivar-group) callo... 171 2e-041
ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA 171 2e-041
dbj|AK100271.1| Oryza sativa (japonica cultivar-group) cDNA... 170 4e-041
dbj|AK062279.1| Oryza sativa (japonica cultivar-group) cDNA... 169 1e-040
ref|NM_187591.1| Oryza sativa (japonica cultivar-group), p... 169 1e-040
ref|NM_193211.1| Oryza sativa (japonica cultivar-group), p... 168 2e-040
dbj|AK099782.1| Oryza sativa (japonica cultivar-group) cDNA... 167 3e-040
dbj|AK120195.1| Oryza sativa (japonica cultivar-group) cDNA... 167 3e-040
dbj|AK120402.1| Oryza sativa (japonica cultivar-group) cDNA... 167 3e-040
gb|AACV01002091.1| Oryza sativa (japonica cultivar-group) c... 167 3e-040
gb|AACV01002367.1| Oryza sativa (japonica cultivar-group) c... 167 3e-040
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 167 3e-040
ref|NM_191270.1| Oryza sativa (japonica cultivar-group), p... 167 3e-040
ref|NM_191973.1| Oryza sativa (japonica cultivar-group), p... 167 3e-040
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 167 3e-040
dbj|AP003223.3| Oryza sativa (japonica cultivar-group) geno... 167 3e-040
dbj|AP003264.3| Oryza sativa (japonica cultivar-group) geno... 167 3e-040
dbj|AP003249.3| Oryza sativa (japonica cultivar-group) geno... 167 3e-040
dbj|AP003268.4| Oryza sativa (japonica cultivar-group) geno... 167 3e-040
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 167 3e-040
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 167 3e-040
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 167 3e-040
ref|NM_193203.1| Oryza sativa (japonica cultivar-group), p... 166 1e-039
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 112 4e-038
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 112 4e-038
dbj|AP004685.3| Oryza sativa (japonica cultivar-group) geno... 112 4e-038
dbj|AP005750.3| Oryza sativa (japonica cultivar-group) geno... 112 4e-038
gb|AACV01014975.1| Oryza sativa (japonica cultivar-group) c... 112 4e-038
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 111 9e-038
dbj|AP004082.3| Oryza sativa (japonica cultivar-group) geno... 111 1e-037
dbj|AP005290.2| Oryza sativa (japonica cultivar-group) geno... 111 1e-037
gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) c... 111 1e-037
dbj|AG208568.1| Oryza sativa (japonica cultivar-group) DNA,... 108 1e-036
dbj|AG208570.1| Oryza sativa (japonica cultivar-group) DNA,... 108 1e-036
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 108 2e-036
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 105 2e-036
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 105 2e-036
dbj|AP003445.2| Oryza sativa (japonica cultivar-group) geno... 104 2e-036
dbj|AP007226.1| Oryza sativa (japonica cultivar-group) geno... 108 2e-036
dbj|AP003447.2| Oryza sativa (japonica cultivar-group) geno... 105 2e-036
dbj|AP007257.2| Oryza sativa (japonica cultivar-group) geno... 108 2e-036
dbj|AP003454.1| Oryza sativa (japonica cultivar-group) chro... 108 2e-036
gb|AACV01013162.1| Oryza sativa (japonica cultivar-group) c... 108 2e-036
gb|AACV01001413.1| Oryza sativa (japonica cultivar-group) c... 104 2e-036
gb|AACV01012882.1| Oryza sativa (japonica cultivar-group) c... 77 5e-036
gb|AACV01001409.1| Oryza sativa (japonica cultivar-group) c... 105 1e-035
dbj|AG020899.1| Oryza sativa (japonica cultivar-group) DNA,... 104 4e-035
dbj|AG022563.1| Oryza sativa (japonica cultivar-group) DNA,... 101 5e-035
dbj|AP001552.1| Oryza sativa (japonica cultivar-group) gene... 77 2e-034
dbj|AP001389.1| Oryza sativa (japonica cultivar-group) geno... 77 2e-034
gb|AACV01005795.1| Oryza sativa (japonica cultivar-group) c... 104 2e-034
gb|AACV01005773.1| Oryza sativa (japonica cultivar-group) c... 76 3e-034
gb|AC118980.2| Oryza sativa (japonica cultivar-group) chrom... 76 8e-034
gb|AC104427.2| Oryza sativa (japonica cultivar-group) chrom... 104 1e-033
gb|AC144426.1| Oryza sativa (japonica cultivar-group) chrom... 104 1e-033
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 104 2e-032
dbj|AK105008.2| Oryza sativa (japonica cultivar-group) cDNA... 141 2e-032
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 95 3e-032
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 95 3e-032
dbj|AP005614.2| Oryza sativa (japonica cultivar-group) geno... 95 3e-032
gb|AACV01003740.1| Oryza sativa (japonica cultivar-group) c... 95 3e-032
gb|AQ272832.1|AQ272832 nbxb0028B24r CUGI Rice BAC Library O... 95 3e-032
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 77 5e-032
dbj|AG210242.1| Oryza sativa (japonica cultivar-group) DNA,... 74 5e-032
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 104 1e-031
gb|AQ840847.1|AQ840847 nbxb0071P12r CUGI Rice BAC Library O... 95 2e-031
gb|CF307470.1|CF307470 HDA1--06-M20.g1 OsHDAC1-overexpressi... 120 7e-026
ref|NM_190295.1| Oryza sativa (japonica cultivar-group), p... 115 2e-024
gb|AQ687725.1|AQ687725 nbxb0075F07f CUGI Rice BAC Library O... 95 3e-024
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 112 1e-023
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 112 1e-023
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 111 4e-023
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 111 4e-023
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 111 4e-023
gb|CB659583.1|CB659583 OSJNEc16L01.f OSJNEc Oryza sativa (j... 109 1e-022
dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mito... 66 5e-022
dbj|AG206877.1| Oryza sativa (japonica cultivar-group) DNA,... 105 1e-021
dbj|AG205959.1| Oryza sativa (japonica cultivar-group) DNA,... 104 3e-021
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 104 3e-021
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 104 3e-021
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 104 3e-021
gb|CW883855.1|CW883855 Rice CISP Intron:I00_X00_F_PRSC1_002... 104 4e-021
dbj|AK064446.1| Oryza sativa (japonica cultivar-group) cDNA... 104 4e-021
>ref|XM_550490.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 5316
Score = 209 bits (451), Expect = 8e-053
Identities = 92/111 (82%), Positives = 92/111 (82%)
Frame = -2 / +1
Query: 334 LAXFMXXXXXSFVXLGXXXLAXXKVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIY 155
LA FM SFV LG LA KVR Y PDVFDRIF ITRGGI KAS VINISEDIY
Sbjct: 3640 LASFMSNQETSFVTLGQRVLAYLKVRMHYGHPDVFDRIFHITRGGISKASGVINISEDIY 3819
Query: 154 AGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
AGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV
Sbjct: 3820 AGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 3972
Score = 189 bits (407), Expect = 1e-046
Identities = 80/111 (72%), Positives = 84/111 (75%)
Frame = +3 / -2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L+TCSPLPPATFPS SAIWFKPTSRPFPTWIYSWCV+FPWR+VELNPAYISSLILIT
Sbjct: 3971 TSLLKTCSPLPPATFPSKSAIWFKPTSRPFPTWIYSWCVIFPWRRVELNPAYISSLILIT 3792
Query: 183 RDAXXMPPRVXXNIRSKTSGXXXXXRTXXXAXXXCPXXTKLXXXXXINXAS 335
DA MPP V N+RSKTSG RT A CP TKL IN AS
Sbjct: 3791 PDALLMPPLVI*NMRSKTSGCP*CIRTLR*ARTRCPKVTKLVSWLDINDAS 3639
Score = 142 bits (305), Expect = 1e-032
Identities = 63/108 (58%), Positives = 69/108 (63%)
Frame = +2 / -1
Query: 2 HISAENLLTIASSNFPLK*CNLVQANITPFPHLDIFMVCDVPLAQSRIEPGIYIFAYINH 181
HISA NL T+ + FP + C LVQ NI+ FP+LDIFMVCD+ LAQSRIE IYIF YINH
Sbjct: 3972 HISA*NLFTVTTGYFPFEKCYLVQTNISSFPNLDIFMVCDISLAQSRIESSIYIFTYINH 3793
Query: 182 SRRLXNATSGYXKYPIKNIRXXIXXSNFXXSKXXXPQXXKTXXXXXHK 325
ATSGY KY IKNIR I SN SK PQ KT HK
Sbjct: 3792 PGCFAYATSGYMKYAIKNIRMSIMHSNLEVSKNTLPQSNKTCFLVRHK 3649
Score = 119 bits (254), Expect = 1e-025
Identities = 60/101 (59%), Positives = 66/101 (65%)
Frame = -3 / +2
Query: 303 VLXXWGXXXLLXXKFEXXMXILMFLIGYXX*PEVAXXRRLE*LI*AKIYMPGSIRLCAKG 124
VL WG LL +FE M ILMFLI Y *PEVA + *LI* KIYM SIRLCA+
Sbjct: 3671 VLLLWGNVFLLTSRFECIMDILMFLIAYFI*PEVA*AKHPG*LI*VKIYMLDSIRLCARE 3850
Query: 123 TSHTMNISRWGKGVMLA*TKLHYLRGKLLEAMVSKFSAEMC 1
SHTMNISR GK ML *TK H+ +GK V+KF AEMC
Sbjct: 3851 ISHTMNISRLGKDEMLV*TK*HFSKGK*PVVTVNKF*AEMC 3973
Score = 115 bits (246), Expect = 2e-024
Identities = 52/100 (52%), Positives = 57/100 (57%)
Frame = -1 / +3
Query: 302 FCXXGAXXXCXXXSSXXXXXS*CF*SDIXXNPRWHXXGVSSD*YKRRYICRVQFDFAPRE 123
FC GA C S S*CF*S I N RWH + D*YK RYIC +QFD AP +
Sbjct: 3672 FCYFGATCSCLPQGSNALWTS*CF*SHISYNQRWHKQSIRGD*YK*RYICWIQFDSAPGK 3851
Query: 122 HHTP*IYPGGERA*CWLEPNCTI*GESCWRQW*ASSQPRC 3
+HTP*IYPG ER CW EPN T ES * S + RC
Sbjct: 3852 YHTP*IYPGWERTRCWFEPNSTFRRESSRW*R*TSFKQRC 3971
Score = 107 bits (229), Expect = 3e-022
Identities = 55/101 (54%), Positives = 61/101 (60%)
Frame = +1 / -3
Query: 1 THLG*ELAHHCLQQLSPQIVQFGSSQHHALSPPGYIHGV*CSLGAKSN*TRHIYLRLY*S 180
THL +L H + LS + V FGS+QH LS PGYIHGV* GA+SN* +HIYL LY*S
Sbjct: 3973 THLCLKLVHRYHRLLSLRKVLFGSNQHLVLSQPGYIHGV*YFPGAESN*IQHIYLHLY*S 3794
Query: 181 LETPXXCHLGLXXISDQKHQDXHXXFELXXXQXXXAPXXQN 303
CHL L I DQKHQD H FE Q AP QN
Sbjct: 3793 PRMLCLCHLWLYEICDQKHQDVHNAFEP*GKQEHVAPK*QN 3671
>gb|CB671521.1|CB671521 OSJNEe05C09.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05C09 5', mRNA sequence
Length = 838
Score = 189 bits (407), Expect = 1e-046
Identities = 80/88 (90%), Positives = 81/88 (92%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDRIF ITRGGI KASRVINISEDIYAGFNSTLR GNITHHEYIQVGKG
Sbjct: 437 KVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRLGNITHHEYIQVGKG 616
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQIALFEGKVAGGNGEQVLSRD+
Sbjct: 617 RDVGLNQIALFEGKVAGGNGEQVLSRDI 700
Score = 123 bits (264), Expect = 5e-027
Identities = 57/79 (72%), Positives = 62/79 (78%)
Frame = +3 / -2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
SRL TCSP PPATFPSNSAI +PTS PFPT IYS VMFP R+VELNPA ISSLIL+TR
Sbjct: 696 SRLSTCSPFPPATFPSNSAI*LRPTSLPFPT*IYS**VMFPKRRVELNPA*ISSLILMTR 517
Query: 186 DAXXMPPRVXXNIRSKTSG 242
+A +PP V I SKTSG
Sbjct: 516 EALLIPPLVI*KILSKTSG 460
>dbj|AK069531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020O14, full
insert sequence
Length = 2087
Score = 189 bits (407), Expect = 1e-046
Identities = 80/88 (90%), Positives = 81/88 (92%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDRIF ITRGGI KASRVINISEDIYAGFNSTLR GNITHHEYIQVGKG
Sbjct: 226 KVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRLGNITHHEYIQVGKG 405
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQIALFEGKVAGGNGEQVLSRD+
Sbjct: 406 RDVGLNQIALFEGKVAGGNGEQVLSRDI 489
Score = 123 bits (264), Expect = 5e-027
Identities = 57/79 (72%), Positives = 62/79 (78%)
Frame = +3 / -1
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
SRL TCSP PPATFPSNSAI +PTS PFPT IYS VMFP R+VELNPA ISSLIL+TR
Sbjct: 485 SRLSTCSPFPPATFPSNSAI*LRPTSLPFPT*IYS**VMFPKRRVELNPA*ISSLILMTR 306
Query: 186 DAXXMPPRVXXNIRSKTSG 242
+A +PP V I SKTSG
Sbjct: 305 EALLIPPLVI*KILSKTSG 249
>ref|NM_187562.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 6168
Score = 189 bits (407), Expect = 1e-046
Identities = 80/88 (90%), Positives = 81/88 (92%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDRIF ITRGGI KASRVINISEDIYAGFNSTLR GNITHHEYIQVGKG
Sbjct: 3256 KVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRLGNITHHEYIQVGKG 3435
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQIALFEGKVAGGNGEQVLSRD+
Sbjct: 3436 RDVGLNQIALFEGKVAGGNGEQVLSRDI 3519
Score = 123 bits (264), Expect = 5e-027
Identities = 57/79 (72%), Positives = 62/79 (78%)
Frame = +3 / -2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
SRL TCSP PPATFPSNSAI +PTS PFPT IYS VMFP R+VELNPA ISSLIL+TR
Sbjct: 3515 SRLSTCSPFPPATFPSNSAI*LRPTSLPFPT*IYS**VMFPKRRVELNPA*ISSLILMTR 3336
Query: 186 DAXXMPPRVXXNIRSKTSG 242
+A +PP V I SKTSG
Sbjct: 3335 EALLIPPLVI*KILSKTSG 3279
>gb|AY324384.1| Oryza sativa (japonica cultivar-group) callose synthase-like protein
mRNA, partial cds
Length = 2727
Score = 171 bits (369), Expect = 2e-041
Identities = 65/88 (73%), Positives = 79/88 (89%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
+VR Y PD+FDR+F +TRGG+ KAS++IN+SEDI+AGFNSTLR+GN+THHEY+QVGKG
Sbjct: 1099 RVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVTHHEYMQVGKG 1278
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI+LFE K+A GNGEQ LSRDV
Sbjct: 1279 RDVGLNQISLFEAKIANGNGEQTLSRDV 1362
Score = 102 bits (218), Expect(2) = 1e-021
Identities = 49/80 (61%), Positives = 52/80 (65%)
Frame = +3 / -2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TSRL CSPLP A F SNS I +PTS P PT +YS CV FP R VELNPA +SSL LI
Sbjct: 1361 TSRLSVCSPLPLAIFASNSEI*LRPTSLPLPTCMYS*CVTFPSRSVELNPANMSSLRLII 1182
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
DA PP V RSK SG
Sbjct: 1181 LDALLTPPLVRWKSRSKISG 1122
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / -3
Query: 226 DQKHQDXHXXFEL 264
DQK+QD H EL
Sbjct: 1138 DQKYQDVHNEIEL 1100
>ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 5910
Score = 171 bits (369), Expect = 2e-041
Identities = 65/88 (73%), Positives = 79/88 (89%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
+VR Y PD+FDR+F +TRGG+ KAS++IN+SEDI+AGFNSTLR+GN+THHEY+QVGKG
Sbjct: 4282 RVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVTHHEYMQVGKG 4461
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI+LFE K+A GNGEQ LSRDV
Sbjct: 4462 RDVGLNQISLFEAKIANGNGEQTLSRDV 4545
Score = 102 bits (218), Expect(2) = 1e-021
Identities = 49/80 (61%), Positives = 52/80 (65%)
Frame = +3 / -2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TSRL CSPLP A F SNS I +PTS P PT +YS CV FP R VELNPA +SSL LI
Sbjct: 4544 TSRLSVCSPLPLAIFASNSEI*LRPTSLPLPTCMYS*CVTFPSRSVELNPANMSSLRLII 4365
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
DA PP V RSK SG
Sbjct: 4364 LDALLTPPLVRWKSRSKISG 4305
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / -3
Query: 226 DQKHQDXHXXFEL 264
DQK+QD H EL
Sbjct: 4321 DQKYQDVHNEIEL 4283
>dbj|AK100271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069L11, full
insert sequence
Length = 2442
Score = 170 bits (366), Expect = 4e-041
Identities = 71/88 (80%), Positives = 77/88 (87%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDRIF ITRGGI KAS IN+SEDI+AGFNSTLR+GN+THHEYIQVGKG
Sbjct: 1728 KVRFHYGHPDVFDRIFHITRGGISKASCGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKG 1907
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 1908 RDVGLNQISLFEAKVACGNGEQTLSRDI 1991
>dbj|AK062279.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C02, full
insert sequence
Length = 2219
Score = 169 bits (363), Expect = 1e-040
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDRIF +TRGG+ KASR IN+SEDI+AG+NSTLR GNITHHEY+QVGKG
Sbjct: 251 KVRFHYGHPDVFDRIFHLTRGGVSKASRSINLSEDIFAGYNSTLRGGNITHHEYVQVGKG 430
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI+ FE KVA GNGEQ LSRD+
Sbjct: 431 RDVGLNQISKFEAKVANGNGEQTLSRDI 514
Score = 103 bits (220), Expect = 6e-021
Identities = 49/79 (62%), Positives = 51/79 (64%)
Frame = +3 / -3
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
SRLR CSP P AT SN IWF PTS P PT YS CV+FP R+VEL PA ISSL LI
Sbjct: 510 SRLRVCSPFPLATLASNLEIWFNPTSLPLPTCTYS*CVIFPPRRVEL*PAKISSLKLILL 331
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA PP V I S TSG
Sbjct: 330 DALLTPPLVR*KILSNTSG 274
>ref|NM_187591.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 4929
Score = 169 bits (363), Expect = 1e-040
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDRIF +TRGG+ KASR IN+SEDI+AG+NSTLR GNITHHEY+QVGKG
Sbjct: 3298 KVRFHYGHPDVFDRIFHLTRGGVSKASRSINLSEDIFAGYNSTLRGGNITHHEYVQVGKG 3477
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI+ FE KVA GNGEQ LSRD+
Sbjct: 3478 RDVGLNQISKFEAKVANGNGEQTLSRDI 3561
Score = 103 bits (220), Expect = 6e-021
Identities = 49/79 (62%), Positives = 51/79 (64%)
Frame = +3 / -2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
SRLR CSP P AT SN IWF PTS P PT YS CV+FP R+VEL PA ISSL LI
Sbjct: 3557 SRLRVCSPFPLATLASNLEIWFNPTSLPLPTCTYS*CVIFPPRRVEL*PAKISSLKLILL 3378
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA PP V I S TSG
Sbjct: 3377 DALLTPPLVR*KILSNTSG 3321
>ref|NM_193211.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 5634
Score = 168 bits (362), Expect = 2e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
+VR Y PDVFDRIF +TRGGI KAS+VIN+SEDI+AGFNSTLRQGN+THHEYIQ+GKG
Sbjct: 4015 QVRFHYGHPDVFDRIFHLTRGGISKASKVINLSEDIFAGFNSTLRQGNVTHHEYIQLGKG 4194
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVG+NQI+ FE KVA GNGEQ L RD+
Sbjct: 4195 RDVGMNQISNFEAKVANGNGEQTLCRDI 4278
>dbj|AK099782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095O05, full
insert sequence
Length = 5774
Score = 167 bits (360), Expect = 3e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ +TRGGI KASRVINISEDI+AGFN TLR GN++HHEYIQVGKG
Sbjct: 3895 KVRMHYGHPDVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKG 4074
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KV+ GNGEQ LSRD+
Sbjct: 4075 RDVGLNQISMFEAKVSSGNGEQTLSRDI 4158
Score = 111 bits (237), Expect = 3e-023
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +3 / -1
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LR CSPLP TF SN I PTSRP PTWIYSW + P R+V+L PA +SSLILIT
Sbjct: 4154 SLLRVCSPLPLETFASNIDI*LSPTSRPLPTWIYSWWLTLPPRRVQLKPANMSSLILITL 3975
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA +PPRV RS TSG
Sbjct: 3974 DALLIPPRVKNQRRSNTSG 3918
>dbj|AK120195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036H01, full
insert sequence
Length = 5949
Score = 167 bits (360), Expect = 3e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ +TRGGI KASRVINISEDI+AGFN TLR GN++HHEYIQVGKG
Sbjct: 3799 KVRMHYGHPDVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKG 3978
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KV+ GNGEQ LSRD+
Sbjct: 3979 RDVGLNQISMFEAKVSSGNGEQTLSRDI 4062
Score = 111 bits (237), Expect = 3e-023
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +3 / -2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LR CSPLP TF SN I PTSRP PTWIYSW + P R+V+L PA +SSLILIT
Sbjct: 4058 SLLRVCSPLPLETFASNIDI*LSPTSRPLPTWIYSWWLTLPPRRVQLKPANMSSLILITL 3879
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA +PPRV RS TSG
Sbjct: 3878 DALLIPPRVKNQRRSNTSG 3822
>dbj|AK120402.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088I17, full
insert sequence
Length = 5396
Score = 167 bits (360), Expect = 3e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ +TRGGI KASRVINISEDI+AGFN TLR GN++HHEYIQVGKG
Sbjct: 3484 KVRMHYGHPDVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKG 3663
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KV+ GNGEQ LSRD+
Sbjct: 3664 RDVGLNQISMFEAKVSSGNGEQTLSRDI 3747
Score = 111 bits (237), Expect = 3e-023
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +3 / -1
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LR CSPLP TF SN I PTSRP PTWIYSW + P R+V+L PA +SSLILIT
Sbjct: 3743 SLLRVCSPLPLETFASNIDI*LSPTSRPLPTWIYSWWLTLPPRRVQLKPANMSSLILITL 3564
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA +PPRV RS TSG
Sbjct: 3563 DALLIPPRVKNQRRSNTSG 3507
>gb|AACV01002091.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002091, whole
genome shotgun sequence
Length = 57249
Score = 167 bits (360), Expect = 3e-040
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 41157 KVRMHYGHPDVFDRLWFLGRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 41336
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ LSRDV
Sbjct: 41337 RDVGLNQVSMFEAKVASGNGEQTLSRDV 41420
Score = 112 bits (240), Expect = 1e-023
Identities = 48/80 (60%), Positives = 54/80 (67%)
Frame = +3 / -3
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L+ CSPLP AT SN PTS P PTW+YSWCV P R+V+LNPA ISSL+ IT
Sbjct: 41419 TSLLKVCSPLPLATLASNMET*LSPTSLPLPTWMYSWCVTLPPRRVQLNPANISSLMFIT 41240
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
DA +PPR RSKTSG
Sbjct: 41239 LDALLIPPRPKNQRRSKTSG 41180
>gb|AACV01002367.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002367, whole
genome shotgun sequence
Length = 23038
Score = 167 bits (360), Expect = 3e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ +TRGGI KASRVINISEDI+AGFN TLR GN++HHEYIQVGKG
Sbjct: 11736 KVRMHYGHPDVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKG 11915
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KV+ GNGEQ LSRD+
Sbjct: 11916 RDVGLNQISMFEAKVSSGNGEQTLSRDI 11999
Score = 111 bits (237), Expect = 3e-023
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +3 / -1
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LR CSPLP TF SN I PTSRP PTWIYSW + P R+V+L PA +SSLILIT
Sbjct: 11995 SLLRVCSPLPLETFASNIDI*LSPTSRPLPTWIYSWWLTLPPRRVQLKPANMSSLILITL 11816
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA +PPRV RS TSG
Sbjct: 11815 DALLIPPRVKNQRRSNTSG 11759
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 167 bits (360), Expect = 3e-040
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 27682752 KVRMHYGHPDVFDRLWFLGRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 27682573
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ LSRDV
Sbjct: 27682572 RDVGLNQVSMFEAKVASGNGEQTLSRDV 27682489
Score = 167 bits (360), Expect = 3e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ +TRGGI KASRVINISEDI+AGFN TLR GN++HHEYIQVGKG
Sbjct: 31718307 KVRMHYGHPDVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKG 31718128
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KV+ GNGEQ LSRD+
Sbjct: 31718127 RDVGLNQISMFEAKVSSGNGEQTLSRDI 31718044
Score = 112 bits (240), Expect = 1e-023
Identities = 48/80 (60%), Positives = 54/80 (67%)
Frame = +3 / +2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L+ CSPLP AT SN PTS P PTW+YSWCV P R+V+LNPA ISSL+ IT
Sbjct: 27682490 TSLLKVCSPLPLATLASNMET*LSPTSLPLPTWMYSWCVTLPPRRVQLNPANISSLMFIT 27682669
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
DA +PPR RSKTSG
Sbjct: 27682670 LDALLIPPRPKNQRRSKTSG 27682729
Score = 111 bits (237), Expect = 3e-023
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +3 / +2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LR CSPLP TF SN I PTSRP PTWIYSW + P R+V+L PA +SSLILIT
Sbjct: 31718048 SLLRVCSPLPLETFASNIDI*LSPTSRPLPTWIYSWWLTLPPRRVQLKPANMSSLILITL 31718227
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA +PPRV RS TSG
Sbjct: 31718228 DALLIPPRVKNQRRSNTSG 31718284
Score = 105 bits (223), Expect = 2e-021
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -2 / -1
Query: 172 ISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ + GFNST+R+GN+THHEY+QVGKGRDVG+NQI+ FE KVA GNGEQ LSRD+
Sbjct: 19335702 LKRNFLIGFNSTMREGNVTHHEYMQVGKGRDVGMNQISSFEAKVANGNGEQTLSRDI 19335532
Score = 104 bits (221), Expect = 4e-021
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -2 / -3
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLRQGN+THHEYIQ+GKGRDVG+NQI+ FE KVA GNGEQ L RD+
Sbjct: 19380784 GFNSTLRQGNVTHHEYIQLGKGRDVGMNQISNFEAKVANGNGEQTLCRDI 19380635
>ref|NM_191270.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 5373
Score = 167 bits (360), Expect = 3e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ +TRGGI KASRVINISEDI+AGFN TLR GN++HHEYIQVGKG
Sbjct: 3760 KVRMHYGHPDVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKG 3939
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KV+ GNGEQ LSRD+
Sbjct: 3940 RDVGLNQISMFEAKVSSGNGEQTLSRDI 4023
Score = 111 bits (237), Expect = 3e-023
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +3 / -2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LR CSPLP TF SN I PTSRP PTWIYSW + P R+V+L PA +SSLILIT
Sbjct: 4019 SLLRVCSPLPLETFASNIDI*LSPTSRPLPTWIYSWWLTLPPRRVQLKPANMSSLILITL 3840
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA +PPRV RS TSG
Sbjct: 3839 DALLIPPRVKNQRRSNTSG 3783
>ref|NM_191973.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 5310
Score = 167 bits (360), Expect = 3e-040
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 3694 KVRMHYGHPDVFDRLWFLGRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 3873
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ LSRDV
Sbjct: 3874 RDVGLNQVSMFEAKVASGNGEQTLSRDV 3957
Score = 112 bits (240), Expect = 1e-023
Identities = 48/80 (60%), Positives = 54/80 (67%)
Frame = +3 / -2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L+ CSPLP AT SN PTS P PTW+YSWCV P R+V+LNPA ISSL+ IT
Sbjct: 3956 TSLLKVCSPLPLATLASNMET*LSPTSLPLPTWMYSWCVTLPPRRVQLNPANISSLMFIT 3777
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
DA +PPR RSKTSG
Sbjct: 3776 LDALLIPPRPKNQRRSKTSG 3717
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 167 bits (360), Expect = 3e-040
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 2130135 KVRMHYGHPDVFDRLWFLGRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 2129956
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ LSRDV
Sbjct: 2129955 RDVGLNQVSMFEAKVASGNGEQTLSRDV 2129872
Score = 167 bits (360), Expect = 3e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ +TRGGI KASRVINISEDI+AGFN TLR GN++HHEYIQVGKG
Sbjct: 6165690 KVRMHYGHPDVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKG 6165511
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KV+ GNGEQ LSRD+
Sbjct: 6165510 RDVGLNQISMFEAKVSSGNGEQTLSRDI 6165427
Score = 112 bits (240), Expect = 1e-023
Identities = 48/80 (60%), Positives = 54/80 (67%)
Frame = +3 / +2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L+ CSPLP AT SN PTS P PTW+YSWCV P R+V+LNPA ISSL+ IT
Sbjct: 2129873 TSLLKVCSPLPLATLASNMET*LSPTSLPLPTWMYSWCVTLPPRRVQLNPANISSLMFIT 2130052
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
DA +PPR RSKTSG
Sbjct: 2130053 LDALLIPPRPKNQRRSKTSG 2130112
Score = 111 bits (237), Expect = 3e-023
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +3 / +2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LR CSPLP TF SN I PTSRP PTWIYSW + P R+V+L PA +SSLILIT
Sbjct: 6165431 SLLRVCSPLPLETFASNIDI*LSPTSRPLPTWIYSWWLTLPPRRVQLKPANMSSLILITL 6165610
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA +PPRV RS TSG
Sbjct: 6165611 DALLIPPRVKNQRRSNTSG 6165667
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0007F06
Length = 150817
Score = 167 bits (360), Expect = 3e-040
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 69376 KVRMHYGHPDVFDRLWFLGRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 69197
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ LSRDV
Sbjct: 69196 RDVGLNQVSMFEAKVASGNGEQTLSRDV 69113
Score = 112 bits (240), Expect = 1e-023
Identities = 48/80 (60%), Positives = 54/80 (67%)
Frame = +3 / +3
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L+ CSPLP AT SN PTS P PTW+YSWCV P R+V+LNPA ISSL+ IT
Sbjct: 69114 TSLLKVCSPLPLATLASNMET*LSPTSLPLPTWMYSWCVTLPPRRVQLNPANISSLMFIT 69293
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
DA +PPR RSKTSG
Sbjct: 69294 LDALLIPPRPKNQRRSKTSG 69353
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0485G01
Length = 167203
Score = 167 bits (360), Expect = 3e-040
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 10648 KVRMHYGHPDVFDRLWFLGRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 10469
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ LSRDV
Sbjct: 10468 RDVGLNQVSMFEAKVASGNGEQTLSRDV 10385
Score = 112 bits (240), Expect = 1e-023
Identities = 48/80 (60%), Positives = 54/80 (67%)
Frame = +3 / +3
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L+ CSPLP AT SN PTS P PTW+YSWCV P R+V+LNPA ISSL+ IT
Sbjct: 10386 TSLLKVCSPLPLATLASNMET*LSPTSLPLPTWMYSWCVTLPPRRVQLNPANISSLMFIT 10565
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
DA +PPR RSKTSG
Sbjct: 10566 LDALLIPPRPKNQRRSKTSG 10625
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0435B05
Length = 150997
Score = 167 bits (360), Expect = 3e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ +TRGGI KASRVINISEDI+AGFN TLR GN++HHEYIQVGKG
Sbjct: 150660 KVRMHYGHPDVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKG 150481
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KV+ GNGEQ LSRD+
Sbjct: 150480 RDVGLNQISMFEAKVSSGNGEQTLSRDI 150397
Score = 111 bits (237), Expect = 3e-023
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +3 / +2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LR CSPLP TF SN I PTSRP PTWIYSW + P R+V+L PA +SSLILIT
Sbjct: 150401 SLLRVCSPLPLETFASNIDI*LSPTSRPLPTWIYSWWLTLPPRRVQLKPANMSSLILITL 150580
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA +PPRV RS TSG
Sbjct: 150581 DALLIPPRVKNQRRSNTSG 150637
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0503C12
Length = 147180
Score = 167 bits (360), Expect = 3e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ +TRGGI KASRVINISEDI+AGFN TLR GN++HHEYIQVGKG
Sbjct: 51369 KVRMHYGHPDVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKG 51190
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KV+ GNGEQ LSRD+
Sbjct: 51189 RDVGLNQISMFEAKVSSGNGEQTLSRDI 51106
Score = 111 bits (237), Expect = 3e-023
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +3 / +2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LR CSPLP TF SN I PTSRP PTWIYSW + P R+V+L PA +SSLILIT
Sbjct: 51110 SLLRVCSPLPLETFASNIDI*LSPTSRPLPTWIYSWWLTLPPRRVQLKPANMSSLILITL 51289
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA +PPRV RS TSG
Sbjct: 51290 DALLIPPRVKNQRRSNTSG 51346
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 167 bits (360), Expect = 3e-040
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 2070586 KVRMHYGHPDVFDRLWFLGRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 2070407
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ LSRDV
Sbjct: 2070406 RDVGLNQVSMFEAKVASGNGEQTLSRDV 2070323
Score = 167 bits (360), Expect = 3e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / -3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ +TRGGI KASRVINISEDI+AGFN TLR GN++HHEYIQVGKG
Sbjct: 6068333 KVRMHYGHPDVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKG 6068154
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KV+ GNGEQ LSRD+
Sbjct: 6068153 RDVGLNQISMFEAKVSSGNGEQTLSRDI 6068070
Score = 112 bits (240), Expect = 1e-023
Identities = 48/80 (60%), Positives = 54/80 (67%)
Frame = +3 / +3
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L+ CSPLP AT SN PTS P PTW+YSWCV P R+V+LNPA ISSL+ IT
Sbjct: 2070324 TSLLKVCSPLPLATLASNMET*LSPTSLPLPTWMYSWCVTLPPRRVQLNPANISSLMFIT 2070503
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
DA +PPR RSKTSG
Sbjct: 2070504 LDALLIPPRPKNQRRSKTSG 2070563
Score = 111 bits (237), Expect = 3e-023
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +3 / +1
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LR CSPLP TF SN I PTSRP PTWIYSW + P R+V+L PA +SSLILIT
Sbjct: 6068074 SLLRVCSPLPLETFASNIDI*LSPTSRPLPTWIYSWWLTLPPRRVQLKPANMSSLILITL 6068253
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA +PPRV RS TSG
Sbjct: 6068254 DALLIPPRVKNQRRSNTSG 6068310
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 167 bits (360), Expect = 3e-040
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 27272307 KVRMHYGHPDVFDRLWFLGRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 27272128
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ LSRDV
Sbjct: 27272127 RDVGLNQVSMFEAKVASGNGEQTLSRDV 27272044
Score = 167 bits (360), Expect = 3e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / -3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ +TRGGI KASRVINISEDI+AGFN TLR GN++HHEYIQVGKG
Sbjct: 31270054 KVRMHYGHPDVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKG 31269875
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KV+ GNGEQ LSRD+
Sbjct: 31269874 RDVGLNQISMFEAKVSSGNGEQTLSRDI 31269791
Score = 112 bits (240), Expect = 1e-023
Identities = 48/80 (60%), Positives = 54/80 (67%)
Frame = +3 / +2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L+ CSPLP AT SN PTS P PTW+YSWCV P R+V+LNPA ISSL+ IT
Sbjct: 27272045 TSLLKVCSPLPLATLASNMET*LSPTSLPLPTWMYSWCVTLPPRRVQLNPANISSLMFIT 27272224
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
DA +PPR RSKTSG
Sbjct: 27272225 LDALLIPPRPKNQRRSKTSG 27272284
Score = 111 bits (237), Expect = 3e-023
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +3 / +3
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LR CSPLP TF SN I PTSRP PTWIYSW + P R+V+L PA +SSLILIT
Sbjct: 31269795 SLLRVCSPLPLETFASNIDI*LSPTSRPLPTWIYSWWLTLPPRRVQLKPANMSSLILITL 31269974
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA +PPRV RS TSG
Sbjct: 31269975 DALLIPPRVKNQRRSNTSG 31270031
Score = 105 bits (223), Expect = 2e-021
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -2 / -3
Query: 172 ISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ + GFNST+R+GN+THHEY+QVGKGRDVG+NQI+ FE KVA GNGEQ LSRD+
Sbjct: 19011943 LKRNFLIGFNSTMREGNVTHHEYMQVGKGRDVGMNQISSFEAKVANGNGEQTLSRDI 19011773
Score = 104 bits (221), Expect = 4e-021
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -2 / -3
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLRQGN+THHEYIQ+GKGRDVG+NQI+ FE KVA GNGEQ L RD+
Sbjct: 19057570 GFNSTLRQGNVTHHEYIQLGKGRDVGMNQISNFEAKVANGNGEQTLCRDI 19057421
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 167 bits (360), Expect = 3e-040
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ + RGGI KASRVINISEDI+AGFN TLR GN+THHEYIQVGKG
Sbjct: 27602082 KVRMHYGHPDVFDRLWFLGRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKG 27601903
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQ+++FE KVA GNGEQ LSRDV
Sbjct: 27601902 RDVGLNQVSMFEAKVASGNGEQTLSRDV 27601819
Score = 167 bits (360), Expect = 3e-040
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
KVR Y PDVFDR++ +TRGGI KASRVINISEDI+AGFN TLR GN++HHEYIQVGKG
Sbjct: 31637637 KVRMHYGHPDVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKG 31637458
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVGLNQI++FE KV+ GNGEQ LSRD+
Sbjct: 31637457 RDVGLNQISMFEAKVSSGNGEQTLSRDI 31637374
Score = 112 bits (240), Expect = 1e-023
Identities = 48/80 (60%), Positives = 54/80 (67%)
Frame = +3 / +2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILIT 182
TS L+ CSPLP AT SN PTS P PTW+YSWCV P R+V+LNPA ISSL+ IT
Sbjct: 27601820 TSLLKVCSPLPLATLASNMET*LSPTSLPLPTWMYSWCVTLPPRRVQLNPANISSLMFIT 27601999
Query: 183 RDAXXMPPRVXXNIRSKTSG 242
DA +PPR RSKTSG
Sbjct: 27602000 LDALLIPPRPKNQRRSKTSG 27602059
Score = 111 bits (237), Expect = 3e-023
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = +3 / +2
Query: 6 SRLRTCSPLPPATFPSNSAIWFKPTSRPFPTWIYSWCVMFPWRKVELNPAYISSLILITR 185
S LR CSPLP TF SN I PTSRP PTWIYSW + P R+V+L PA +SSLILIT
Sbjct: 31637378 SLLRVCSPLPLETFASNIDI*LSPTSRPLPTWIYSWWLTLPPRRVQLKPANMSSLILITL 31637557
Query: 186 DAXXMPPRVXXNIRSKTSG 242
DA +PPRV RS TSG
Sbjct: 31637558 DALLIPPRVKNQRRSNTSG 31637614
Score = 105 bits (223), Expect = 2e-021
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -2 / -1
Query: 172 ISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ + GFNST+R+GN+THHEY+QVGKGRDVG+NQI+ FE KVA GNGEQ LSRD+
Sbjct: 19256985 LKRNFLIGFNSTMREGNVTHHEYMQVGKGRDVGMNQISSFEAKVANGNGEQTLSRDI 19256815
Score = 104 bits (221), Expect = 4e-021
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -2 / -3
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLRQGN+THHEYIQ+GKGRDVG+NQI+ FE KVA GNGEQ L RD+
Sbjct: 19302067 GFNSTLRQGNVTHHEYIQLGKGRDVGMNQISNFEAKVANGNGEQTLCRDI 19301918
>ref|NM_193203.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1809
Score = 166 bits (356), Expect = 1e-039
Identities = 63/88 (71%), Positives = 77/88 (87%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKG 86
+VR Y PD+FDR+F ITRGGI KAS+ IN+SEDI++GFNST+R+GN+THHEY+QVGKG
Sbjct: 46 RVRFHYGHPDIFDRLFHITRGGISKASKTINLSEDIFSGFNSTMREGNVTHHEYMQVGKG 225
Query: 85 RDVGLNQIALFEGKVAGGNGEQVLSRDV 2
RDVG+NQI+ FE KVA GNGEQ LSRD+
Sbjct: 226 RDVGMNQISSFEAKVANGNGEQTLSRDI 309
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 112 bits (239), Expect(2) = 4e-038
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -2 / -3
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ AGFNSTLR+GN+THHEY+QVGKGRDVGLNQIALFE K+A GNGEQ LSRD+
Sbjct: 11851794 VAAGFNSTLREGNVTHHEYMQVGKGRDVGLNQIALFEAKIANGNGEQTLSRDI 11851636
Score = 68.4 bits (143), Expect(2) = 4e-038
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F +TRGG+ KAS++IN+SEDI+AG
Sbjct: 11851979 RVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAG 11851863
>ref|NT_107235.1| Oryza sativa (japonica cultivar-group)
Length = 369247
Score = 112 bits (239), Expect(2) = 4e-038
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -2 / -3
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ AGFNSTLR+GN+THHEY+QVGKGRDVGLNQIALFE K+A GNGEQ LSRD+
Sbjct: 157136 VAAGFNSTLREGNVTHHEYMQVGKGRDVGLNQIALFEAKIANGNGEQTLSRDI 156978
Score = 68.4 bits (143), Expect(2) = 4e-038
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F +TRGG+ KAS++IN+SEDI+AG
Sbjct: 157321 RVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAG 157205
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0017G10
Length = 166700
Score = 112 bits (239), Expect(2) = 4e-038
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -2 / -1
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ AGFNSTLR+GN+THHEY+QVGKGRDVGLNQIALFE K+A GNGEQ LSRD+
Sbjct: 157136 VAAGFNSTLREGNVTHHEYMQVGKGRDVGLNQIALFEAKIANGNGEQTLSRDI 156978
Score = 68.4 bits (143), Expect(2) = 4e-038
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F +TRGG+ KAS++IN+SEDI+AG
Sbjct: 157321 RVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAG 157205
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0069C14
Length = 150579
Score = 112 bits (239), Expect(2) = 4e-038
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -2 / -2
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ AGFNSTLR+GN+THHEY+QVGKGRDVGLNQIALFE K+A GNGEQ LSRD+
Sbjct: 18338 VAAGFNSTLREGNVTHHEYMQVGKGRDVGLNQIALFEAKIANGNGEQTLSRDI 18180
Score = 68.4 bits (143), Expect(2) = 4e-038
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = -2 / -3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F +TRGG+ KAS++IN+SEDI+AG
Sbjct: 18523 RVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAG 18407
>gb|AACV01014975.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014975, whole
genome shotgun sequence
Length = 9397
Score = 112 bits (239), Expect(2) = 4e-038
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -2 / +3
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ AGFNSTLR+GN+THHEY+QVGKGRDVGLNQIALFE K+A GNGEQ LSRD+
Sbjct: 3381 VAAGFNSTLREGNVTHHEYMQVGKGRDVGLNQIALFEAKIANGNGEQTLSRDI 3539
Score = 68.4 bits (143), Expect(2) = 4e-038
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F +TRGG+ KAS++IN+SEDI+AG
Sbjct: 3196 RVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAG 3312
>ref|NT_107182.1| Oryza sativa (japonica cultivar-group)
Length = 1785023
Score = 111 bits (236), Expect(2) = 9e-038
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -2 / +2
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
I +GFNSTLR+GN+THHEY+QVGKGRDVGLNQI+LFE K+A GNGEQ LSRDV
Sbjct: 1655831 IVSGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDV 1655989
Score = 68.4 bits (143), Expect(2) = 9e-038
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F +TRGG+ KAS++IN+SEDI+AG
Sbjct: 1655644 RVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAG 1655760
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1149_C12
Length = 120743
Score = 111 bits (236), Expect(2) = 1e-037
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -2 / +1
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
I +GFNSTLR+GN+THHEY+QVGKGRDVGLNQI+LFE K+A GNGEQ LSRDV
Sbjct: 91273 IVSGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDV 91431
Score = 68.4 bits (143), Expect(2) = 1e-037
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F +TRGG+ KAS++IN+SEDI+AG
Sbjct: 91086 RVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAG 91202
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1282_E10
Length = 107284
Score = 111 bits (236), Expect(2) = 1e-037
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -2 / +1
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
I +GFNSTLR+GN+THHEY+QVGKGRDVGLNQI+LFE K+A GNGEQ LSRDV
Sbjct: 11104 IVSGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDV 11262
Score = 68.4 bits (143), Expect(2) = 1e-037
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = -2 / +3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F +TRGG+ KAS++IN+SEDI+AG
Sbjct: 10917 RVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAG 11033
>gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005686, whole
genome shotgun sequence
Length = 38041
Score = 111 bits (236), Expect(2) = 1e-037
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -2 / +3
Query: 160 IYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
I +GFNSTLR+GN+THHEY+QVGKGRDVGLNQI+LFE K+A GNGEQ LSRDV
Sbjct: 5628 IVSGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDV 5786
Score = 68.4 bits (143), Expect(2) = 1e-037
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F +TRGG+ KAS++IN+SEDI+AG
Sbjct: 5441 RVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAG 5557
>dbj|AG208568.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE3534_0_403_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE3534, genomic survey sequence
Length = 505
Score = 108 bits (231), Expect(2) = 1e-036
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = -2 / -3
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLR+GN+THHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 251 GFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDI 102
Score = 66.1 bits (138), Expect(2) = 1e-036
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -2 / -3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF ITRGGI KAS IN+SEDI+AG
Sbjct: 440 RVRFHYGHPDVFDRIFHITRGGISKASCGINLSEDIFAG 324
>dbj|AG208570.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE3516_0_402_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE3516, genomic survey sequence
Length = 505
Score = 108 bits (231), Expect(2) = 1e-036
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = -2 / -3
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLR+GN+THHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 251 GFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDI 102
Score = 66.1 bits (138), Expect(2) = 1e-036
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -2 / -3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF ITRGGI KAS IN+SEDI+AG
Sbjct: 440 RVRFHYGHPDVFDRIFHITRGGISKASCGINLSEDIFAG 324
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 108 bits (231), Expect(2) = 2e-036
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = -2 / -2
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLR+GN+THHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 3913850 GFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDI 3913701
Score = 77.1 bits (162), Expect(3) = 3e-027
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +3 / +2
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPT 98
TS L+TCSPLPPATFPS SAIWFKPTSRPFPT
Sbjct: 620942 TSLLKTCSPLPPATFPSKSAIWFKPTSRPFPT 621037
Score = 76.7 bits (161), Expect(3) = 4e-031
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = -2 / -1
Query: 100 QVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+VGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV
Sbjct: 621039 KVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 620941
Score = 73.0 bits (153), Expect(3) = 4e-031
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGF 146
+VR Y PDVFDRIF ITRGGI KAS VINISEDIYAG+
Sbjct: 622059 RVRMHYGHPDVFDRIFHITRGGISKASGVINISEDIYAGW 621940
Score = 66.1 bits (138), Expect(2) = 2e-036
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF ITRGGI KAS IN+SEDI+AG
Sbjct: 3914039 RVRFHYGHPDVFDRIFHITRGGISKASCGINLSEDIFAG 3913923
Score = 56.5 bits (117), Expect(3) = 3e-027
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +3 / +2
Query: 96 TWIYSWCVMFPWRKVELNPA 155
TWIYSWCV+FPWR+VELNPA
Sbjct: 621458 TWIYSWCVIFPWRRVELNPA 621517
Score = 54.7 bits (113), Expect(3) = 3e-027
Identities = 24/41 (58%), Positives = 25/41 (60%)
Frame = +2 / +1
Query: 140 RIEPGIYIFAYINHSRRLXNATSGYXKYPIKNIRXXIXXSN 262
+I IYIF YINH ATSGY KY IKNIR I SN
Sbjct: 621934 KIPTSIYIFTYINHPGCFAYATSGYMKYAIKNIRMSIMHSN 622056
Score = 51.9 bits (107), Expect(3) = 4e-031
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -2 / -1
Query: 154 AGFNSTLRQGNITHHEYIQV 95
AGFNSTLRQGNITHHEYIQV
Sbjct: 621516 AGFNSTLRQGNITHHEYIQV 621457
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003 genomic
scaffold, whole genome shotgun sequence
Length = 8539496
Score = 105 bits (223), Expect(2) = 1e-035
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -2 / -1
Query: 172 ISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ + GFNST+R+GN+THHEY+QVGKGRDVG+NQI+ FE KVA GNGEQ LSRD+
Sbjct: 2386820 LKRNFLIGFNSTMREGNVTHHEYMQVGKGRDVGMNQISSFEAKVANGNGEQTLSRDI 2386650
Score = 104 bits (221), Expect(2) = 2e-036
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -2 / -1
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLRQGN+THHEYIQ+GKGRDVG+NQI+ FE KVA GNGEQ L RD+
Sbjct: 2432447 GFNSTLRQGNVTHHEYIQLGKGRDVGMNQISNFEAKVANGNGEQTLCRDI 2432298
Score = 70.7 bits (148), Expect(2) = 2e-036
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -2 / -3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF +TRGGI KAS+VIN+SEDI+AG
Sbjct: 2432640 RVRFHYGHPDVFDRIFHLTRGGISKASKVINLSEDIFAG 2432524
Score = 67.0 bits (140), Expect(2) = 1e-035
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F ITRGGI KAS+ IN+SEDI++G
Sbjct: 2386988 RVRFHYGHPDIFDRLFHITRGGISKASKTINLSEDIFSG 2386872
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 105 bits (223), Expect(2) = 1e-035
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -2 / -3
Query: 172 ISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ + GFNST+R+GN+THHEY+QVGKGRDVG+NQI+ FE KVA GNGEQ LSRD+
Sbjct: 2253934 LKRNFLIGFNSTMREGNVTHHEYMQVGKGRDVGMNQISSFEAKVANGNGEQTLSRDI 2253764
Score = 104 bits (221), Expect(2) = 2e-036
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -2 / -2
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLRQGN+THHEYIQ+GKGRDVG+NQI+ FE KVA GNGEQ L RD+
Sbjct: 2299016 GFNSTLRQGNVTHHEYIQLGKGRDVGMNQISNFEAKVANGNGEQTLCRDI 2298867
Score = 70.7 bits (148), Expect(2) = 2e-036
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF +TRGGI KAS+VIN+SEDI+AG
Sbjct: 2299209 RVRFHYGHPDVFDRIFHLTRGGISKASKVINLSEDIFAG 2299093
Score = 67.0 bits (140), Expect(2) = 1e-035
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -2 / -3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F ITRGGI KAS+ IN+SEDI++G
Sbjct: 2254102 RVRFHYGHPDIFDRLFHITRGGISKASKTINLSEDIFSG 2253986
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OJ1029_F04
Length = 141834
Score = 104 bits (221), Expect(2) = 2e-036
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -2 / -1
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLRQGN+THHEYIQ+GKGRDVG+NQI+ FE KVA GNGEQ L RD+
Sbjct: 30072 GFNSTLRQGNVTHHEYIQLGKGRDVGMNQISNFEAKVANGNGEQTLCRDI 29923
Score = 70.7 bits (148), Expect(2) = 2e-036
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -2 / -3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF +TRGGI KAS+VIN+SEDI+AG
Sbjct: 30265 RVRFHYGHPDVFDRIFHLTRGGISKASKVINLSEDIFAG 30149
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0036B04
Length = 136159
Score = 108 bits (231), Expect(2) = 2e-036
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = -2 / -1
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLR+GN+THHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 14530 GFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDI 14381
Score = 66.1 bits (138), Expect(2) = 2e-036
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF ITRGGI KAS IN+SEDI+AG
Sbjct: 14719 RVRFHYGHPDVFDRIFHITRGGISKASCGINLSEDIFAG 14603
>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OJ1619_F12
Length = 133028
Score = 105 bits (223), Expect(2) = 1e-035
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -2 / -2
Query: 172 ISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ + GFNST+R+GN+THHEY+QVGKGRDVG+NQI+ FE KVA GNGEQ LSRD+
Sbjct: 76606 LKRNFLIGFNSTMREGNVTHHEYMQVGKGRDVGMNQISSFEAKVANGNGEQTLSRDI 76436
Score = 104 bits (221), Expect(2) = 2e-036
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -2 / -1
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLRQGN+THHEYIQ+GKGRDVG+NQI+ FE KVA GNGEQ L RD+
Sbjct: 121688 GFNSTLRQGNVTHHEYIQLGKGRDVGMNQISNFEAKVANGNGEQTLCRDI 121539
Score = 70.7 bits (148), Expect(2) = 2e-036
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -2 / -3
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF +TRGGI KAS+VIN+SEDI+AG
Sbjct: 121881 RVRFHYGHPDVFDRIFHLTRGGISKASKVINLSEDIFAG 121765
Score = 67.0 bits (140), Expect(2) = 1e-035
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F ITRGGI KAS+ IN+SEDI++G
Sbjct: 76774 RVRFHYGHPDIFDRLFHITRGGISKASKTINLSEDIFSG 76658
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0019L07
Length = 131650
Score = 108 bits (231), Expect(2) = 2e-036
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = -2 / -1
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLR+GN+THHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 124924 GFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDI 124775
Score = 66.1 bits (138), Expect(2) = 2e-036
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF ITRGGI KAS IN+SEDI+AG
Sbjct: 125113 RVRFHYGHPDVFDRIFHITRGGISKASCGINLSEDIFAG 124997
>dbj|AP003454.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone P0499E08, ***
SEQUENCING IN PROGRESS ***
Length = 85150
Score = 108 bits (231), Expect(2) = 2e-036
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = -2 / -1
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLR+GN+THHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 42061 GFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDI 41912
Score = 66.1 bits (138), Expect(2) = 2e-036
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF ITRGGI KAS IN+SEDI+AG
Sbjct: 42250 RVRFHYGHPDVFDRIFHITRGGISKASCGINLSEDIFAG 42134
>gb|AACV01013162.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013162, whole
genome shotgun sequence
Length = 37554
Score = 108 bits (231), Expect(2) = 2e-036
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = -2 / +1
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLR+GN+THHEYIQVGKGRDVGLNQI+LFE KVA GNGEQ LSRD+
Sbjct: 35797 GFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDI 35946
Score = 66.1 bits (138), Expect(2) = 2e-036
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -2 / +1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF ITRGGI KAS IN+SEDI+AG
Sbjct: 35608 RVRFHYGHPDVFDRIFHITRGGISKASCGINLSEDIFAG 35724
>gb|AACV01001413.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001413, whole
genome shotgun sequence
Length = 32302
Score = 104 bits (221), Expect(2) = 2e-036
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -2 / -3
Query: 151 GFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
GFNSTLRQGN+THHEYIQ+GKGRDVG+NQI+ FE KVA GNGEQ L RD+
Sbjct: 9032 GFNSTLRQGNVTHHEYIQLGKGRDVGMNQISNFEAKVANGNGEQTLCRDI 8883
Score = 70.7 bits (148), Expect(2) = 2e-036
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -2 / -2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PDVFDRIF +TRGGI KAS+VIN+SEDI+AG
Sbjct: 9225 RVRFHYGHPDVFDRIFHLTRGGISKASKVINLSEDIFAG 9109
>gb|AACV01012882.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg012882, whole
genome shotgun sequence
Length = 24683
Score = 77.1 bits (162), Expect(3) = 4e-032
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +3 / -3
Query: 3 TSRLRTCSPLPPATFPSNSAIWFKPTSRPFPT 98
TS L+TCSPLPPATFPS SAIWFKPTSRPFPT
Sbjct: 11379 TSLLKTCSPLPPATFPSKSAIWFKPTSRPFPT 11284
Score = 76.7 bits (161), Expect(3) = 5e-036
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = -2 / +2
Query: 100 QVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+VGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV
Sbjct: 11282 KVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 11380
Score = 73.0 bits (153), Expect(3) = 5e-036
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -2 / +2
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAGF 146
+VR Y PDVFDRIF ITRGGI KAS VINISEDIYAG+
Sbjct: 10262 RVRMHYGHPDVFDRIFHITRGGISKASGVINISEDIYAGW 10381
Score = 56.5 bits (117), Expect(3) = 4e-032
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +3 / -3
Query: 96 TWIYSWCVMFPWRKVELNPA 155
TWIYSWCV+FPWR+VELNPA
Sbjct: 10863 TWIYSWCVIFPWRRVELNPA 10804
Score = 54.7 bits (113), Expect(3) = 4e-032
Identities = 24/41 (58%), Positives = 25/41 (60%)
Frame = +2 / -2
Query: 140 RIEPGIYIFAYINHSRRLXNATSGYXKYPIKNIRXXIXXSN 262
+I IYIF YINH ATSGY KY IKNIR I SN
Sbjct: 10387 KIPTSIYIFTYINHPGCFAYATSGYMKYAIKNIRMSIMHSN 10265
Score = 51.9 bits (107), Expect(3) = 5e-036
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -2 / +2
Query: 154 AGFNSTLRQGNITHHEYIQV 95
AGFNSTLRQGNITHHEYIQV
Sbjct: 10805 AGFNSTLRQGNITHHEYIQV 10864
>gb|AACV01001409.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001409, whole
genome shotgun sequence
Length = 30879
Score = 105 bits (223), Expect(2) = 1e-035
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -2 / -1
Query: 172 ISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDV 2
+ + GFNST+R+GN+THHEY+QVGKGRDVG+NQI+ FE KVA GNGEQ LSRD+
Sbjct: 10020 LKRNFLIGFNSTMREGNVTHHEYMQVGKGRDVGMNQISSFEAKVANGNGEQTLSRDI 9850
Score = 67.0 bits (140), Expect(2) = 1e-035
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -2 / -1
Query: 265 KVRXXYXXPDVFDRIFXITRGGIXKASRVINISEDIYAG 149
+VR Y PD+FDR+F ITRGGI KAS+ IN+SEDI++G
Sbjct: 10188 RVRFHYGHPDIFDRLFHITRGGISKASKTINLSEDIFSG 10072
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,702,366,380
Number of Sequences: 438736
Number of extensions: 22923697
Number of successful extensions: 191731
Number of sequences better than 1.0e-020: 115
length of database: 933,473,305
effective HSP length: 56
effective length of database: 908,904,089
effective search space used: 49989724895
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)