TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF13b04.yg.2.1
(370 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK069531.1| Oryza sativa (japonica cultivar-group) cDNA... 228 2e-058
ref|NM_187562.1| Oryza sativa (japonica cultivar-group), p... 228 2e-058
gb|AU062726.1|AU062726 AU062726 Rice callus Oryza sativa (j... 209 1e-052
gb|AACV01005773.1| Oryza sativa (japonica cultivar-group) c... 111 3e-043
gb|AC118980.2| Oryza sativa (japonica cultivar-group) chrom... 111 1e-042
ref|XM_550490.1| Oryza sativa (japonica cultivar-group), mRNA 176 1e-042
gb|CB684140.1|CB684140 OSJNEf13F24.f OSJNEf Oryza sativa (j... 167 4e-040
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 134 3e-039
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 134 4e-038
dbj|AK071856.1| Oryza sativa (japonica cultivar-group) cDNA... 149 1e-034
dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mito... 148 2e-034
dbj|AK060407.1| Oryza sativa (japonica cultivar-group) cDNA... 147 6e-034
gb|AACV01002091.1| Oryza sativa (japonica cultivar-group) c... 147 6e-034
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 147 6e-034
ref|NM_191973.1| Oryza sativa (japonica cultivar-group), p... 147 6e-034
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 147 6e-034
dbj|AP003223.3| Oryza sativa (japonica cultivar-group) geno... 147 6e-034
dbj|AP003264.3| Oryza sativa (japonica cultivar-group) geno... 147 6e-034
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 147 6e-034
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 147 6e-034
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 147 6e-034
dbj|AG209222.1| Oryza sativa (japonica cultivar-group) DNA,... 146 8e-034
dbj|AG211728.1| Oryza sativa (japonica cultivar-group) DNA,... 146 8e-034
dbj|AP003454.1| Oryza sativa (japonica cultivar-group) chro... 146 8e-034
dbj|AK100271.1| Oryza sativa (japonica cultivar-group) cDNA... 146 8e-034
gb|AACV01013162.1| Oryza sativa (japonica cultivar-group) c... 146 8e-034
dbj|AP007226.1| Oryza sativa (japonica cultivar-group) geno... 146 8e-034
dbj|AP007257.2| Oryza sativa (japonica cultivar-group) geno... 146 8e-034
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 146 8e-034
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 146 8e-034
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 146 8e-034
dbj|AK099782.1| Oryza sativa (japonica cultivar-group) cDNA... 145 2e-033
dbj|AK120195.1| Oryza sativa (japonica cultivar-group) cDNA... 145 2e-033
dbj|AK120402.1| Oryza sativa (japonica cultivar-group) cDNA... 145 2e-033
gb|AACV01002367.1| Oryza sativa (japonica cultivar-group) c... 145 2e-033
ref|NM_191270.1| Oryza sativa (japonica cultivar-group), p... 145 2e-033
dbj|AP003249.3| Oryza sativa (japonica cultivar-group) geno... 145 2e-033
dbj|AP003268.4| Oryza sativa (japonica cultivar-group) geno... 145 2e-033
dbj|AK064446.1| Oryza sativa (japonica cultivar-group) cDNA... 140 7e-032
gb|AACV01001413.1| Oryza sativa (japonica cultivar-group) c... 140 7e-032
ref|NM_193211.1| Oryza sativa (japonica cultivar-group), p... 140 7e-032
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 140 7e-032
dbj|AP003447.2| Oryza sativa (japonica cultivar-group) geno... 140 7e-032
dbj|AP003445.2| Oryza sativa (japonica cultivar-group) geno... 140 7e-032
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 140 7e-032
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 135 2e-030
dbj|AP004685.3| Oryza sativa (japonica cultivar-group) geno... 135 2e-030
dbj|AP005750.3| Oryza sativa (japonica cultivar-group) geno... 135 2e-030
gb|AACV01014975.1| Oryza sativa (japonica cultivar-group) c... 135 2e-030
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 135 2e-030
gb|CB642889.1|CB642889 OSJNEb03E21.f OSJNEb Oryza sativa (j... 134 3e-030
dbj|AK062279.1| Oryza sativa (japonica cultivar-group) cDNA... 134 3e-030
gb|AC104427.2| Oryza sativa (japonica cultivar-group) chrom... 134 3e-030
gb|AC144426.1| Oryza sativa (japonica cultivar-group) chrom... 134 3e-030
dbj|AK105008.2| Oryza sativa (japonica cultivar-group) cDNA... 134 3e-030
gb|AACV01005795.1| Oryza sativa (japonica cultivar-group) c... 134 3e-030
ref|NM_187591.1| Oryza sativa (japonica cultivar-group), p... 134 3e-030
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 134 3e-030
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 134 3e-030
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 134 3e-030
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 84 4e-030
dbj|AP001389.1| Oryza sativa (japonica cultivar-group) geno... 84 5e-030
dbj|AP001552.1| Oryza sativa (japonica cultivar-group) gene... 84 5e-030
gb|AACV01012882.1| Oryza sativa (japonica cultivar-group) c... 84 5e-030
dbj|AP005649.3| Oryza sativa (japonica cultivar-group) geno... 133 6e-030
dbj|AP005614.2| Oryza sativa (japonica cultivar-group) geno... 133 6e-030
gb|AACV01003332.1| Oryza sativa (japonica cultivar-group) c... 133 6e-030
gb|AACV01003740.1| Oryza sativa (japonica cultivar-group) c... 133 6e-030
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 133 6e-030
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 133 6e-030
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 133 6e-030
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 133 6e-030
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 133 6e-030
gb|AACV01001409.1| Oryza sativa (japonica cultivar-group) c... 115 2e-028
ref|NM_193203.1| Oryza sativa (japonica cultivar-group), p... 115 2e-028
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 110 2e-027
dbj|AP004082.3| Oryza sativa (japonica cultivar-group) geno... 110 2e-027
dbj|AP005290.2| Oryza sativa (japonica cultivar-group) geno... 110 2e-027
gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) c... 110 2e-027
ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA 110 2e-027
gb|AY324384.1| Oryza sativa (japonica cultivar-group) callo... 110 2e-027
gb|CB659583.1|CB659583 OSJNEc16L01.f OSJNEc Oryza sativa (j... 110 2e-027
dbj|AG209650.1| Oryza sativa (japonica cultivar-group) DNA,... 124 3e-027
dbj|AG213037.1| Oryza sativa (japonica cultivar-group) DNA,... 123 8e-027
dbj|AK059373.1| Oryza sativa (japonica cultivar-group) cDNA... 119 1e-025
gb|CB677902.1|CB677902 OSJNEe15F12.f OSJNEe Oryza sativa (j... 117 5e-025
gb|CB669058.1|CB669058 OSJNEe01E09.f OSJNEe Oryza sativa (j... 100 7e-024
gb|AZ135659.1|AZ135659 OSJNBb0116N17r CUGI Rice BAC Library... 111 3e-023
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 110 8e-023
dbj|AK099834.1| Oryza sativa (japonica cultivar-group) cDNA... 88 4e-022
>dbj|AK069531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020O14, full
insert sequence
Length = 2087
Score = 228 bits (493), Expect = 2e-058
Identities = 94/111 (84%), Positives = 100/111 (90%)
Frame = -1 / -1
Query: 349 TTKPLPVALYFAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDSRMKPRI 170
TTKPLPVALYFAPPC+I RPK*WVLVP EKVKNTE WNCIV+ TKAVKTP+SRMKPRI
Sbjct: 920 TTKPLPVALYFAPPCSIVRPK*WVLVPREKVKNTEQSWNCIVMKLTKAVKTPNSRMKPRI 741
Query: 169 MGTAVNTPIWKRN*VFRAAFKAAFCSISALF*IDSPTPDKARYIFP*RNMY 17
+G AVNTPIWKRN VFRAAFKA FC+IS LF*IDSPTPDKAR +FP*RNMY
Sbjct: 740 IGIAVNTPIWKRNCVFRAAFKAVFCNISTLF*IDSPTPDKAR*VFP*RNMY 588
Score = 221 bits (476), Expect = 4e-056
Identities = 93/111 (83%), Positives = 95/111 (85%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
YIFLYGK YLALSGVGESIQNR DI TQFLFQIGVFTA+PMILGFILE G
Sbjct: 589 YIFLYGKTYLALSGVGESIQNRVDILQNTALNAALNTQFLFQIGVFTAIPMILGFILEFG 768
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
VLTAFV FITMQFQ+CSVFFTFSLGTRTHYFGR ILHGGAKYRATGRGFVV
Sbjct: 769 VLTAFVSFITMQFQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVV 921
Score = 212 bits (457), Expect = 1e-053
Identities = 78/114 (68%), Positives = 93/114 (81%)
Frame = +2 / +3
Query: 14 QVHISLWENVSGLIWCWRINSK*SGYTAERSLECCSEHSISFPDWCIYCCSHDSWFHP*I 193
+VHISLWEN+SG +W WRINS+* GY AE SLEC SEH++SFPDWCIYC S+DS FHP I
Sbjct: 585 RVHISLWENLSGFVWSWRINSE*GGYIAEHSLECSSEHTVSFPDWCIYCYSYDSGFHPGI 764
Query: 194 RCFNGFCSVYYNAVPNVLCIFYFLTWNKNPLLWPCNITWRCKV*SNR*RFCGTS 355
C +GFC ++++AVP +LCIFYFL K+PL WP N TW CKV*SNR* FCGT+
Sbjct: 765 WCLDGFCQLHHDAVPTLLCIFYFLPGYKDPLFWPHNTTWWCKV*SNR*GFCGTT 926
Score = 194 bits (419), Expect = 3e-048
Identities = 83/111 (74%), Positives = 94/111 (84%)
Frame = -3 / -3
Query: 350 YHKTSTGCSILCTSM*YCTAKVVGSCSK*ESKKYRAHLELHCNKLNKSR*NT*FKDETKN 171
YHKT TGCSILCT+M*YC AK+VG C++ ESKKYRA LELH ++ +KSR +T F+DET+N
Sbjct: 921 YHKTPTGCSILCTTM*YCAAKIVGPCTQGESKKYRAKLELHRDEADKSRQDTKFQDETQN 742
Query: 170 HGNSSKYTNLEKKLSVQSSIQGCVLQYIRSILN*FSNTR*GQIHFPIEKYV 18
H NSSKYTNLEKKL VQS IQGCVLQYI ILN*FSN+R QI FPIEKYV
Sbjct: 741 HRNSSKYTNLEKKLCVQSCIQGCVLQYIHPILN*FSNSRQSQIGFPIEKYV 589
Score = 170 bits (366), Expect = 5e-041
Identities = 80/112 (71%), Positives = 87/112 (77%)
Frame = -2 / -2
Query: 351 VPQNLYRLLYTLHLHVILHGQSSGFLFQVRK*KIQSTFGTAL**TEQKPLKHLIQG*NQE 172
VPQN YRLLYTLH HV+L GQ+SG L+ RK*KIQS GTA **+ QKP +H I G*N E
Sbjct: 922 VPQNPYRLLYTLHHHVVLCGQNSGSLYPGRK*KIQSKVGTAS**S*QKPSRHQIPG*NPE 743
Query: 171 SWEQQ*IHQSGKEIECSEQHSRLRSAVYPLYFELILQHQIRPDTFSHREICT 16
S E Q*IHQSGKE CSE HSRL SA+YP Y ELILQ Q +PD FSHREICT
Sbjct: 742 S*E*Q*IHQSGKETVCSELHSRLCSAIYPPYSELILQLQTKPDRFSHREICT 587
Score = 78.0 bits (164), Expect(2) = 1e-028
Identities = 37/54 (68%), Positives = 39/54 (72%)
Frame = +1 / +2
Query: 190 NQVF*RLLFSLLQCSSKCALYFLLSHLEQEPTTLAVQYYMEVQSIEQPVEVLWY 351
N V *RLL + +CSS ALYFLLS Q PT LA QYYM VQSIEQPV VLWY
Sbjct: 761 NLVS*RLLSASSRCSSNFALYFLLSPWVQGPTILAAQYYMVVQSIEQPVGVLWY 922
Score = 71.2 bits (149), Expect(2) = 1e-028
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +1 / +2
Query: 19 TYFSMGKCIWPYLVLENQFKIERIYCRTQP*MLL*TLNFFSR 144
TYFSMGK IW L LENQF+I IYCRTQP*M L*T +FFSR
Sbjct: 590 TYFSMGKPIWLCLELENQFRIGWIYCRTQP*MQL*THSFFSR 715
>ref|NM_187562.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 6168
Score = 228 bits (493), Expect = 2e-058
Identities = 94/111 (84%), Positives = 100/111 (90%)
Frame = -1 / -2
Query: 349 TTKPLPVALYFAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDSRMKPRI 170
TTKPLPVALYFAPPC+I RPK*WVLVP EKVKNTE WNCIV+ TKAVKTP+SRMKPRI
Sbjct: 3950 TTKPLPVALYFAPPCSIVRPK*WVLVPREKVKNTEQSWNCIVMKLTKAVKTPNSRMKPRI 3771
Query: 169 MGTAVNTPIWKRN*VFRAAFKAAFCSISALF*IDSPTPDKARYIFP*RNMY 17
+G AVNTPIWKRN VFRAAFKA FC+IS LF*IDSPTPDKAR +FP*RNMY
Sbjct: 3770 IGIAVNTPIWKRNCVFRAAFKAVFCNISTLF*IDSPTPDKAR*VFP*RNMY 3618
Score = 221 bits (476), Expect = 4e-056
Identities = 93/111 (83%), Positives = 95/111 (85%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
YIFLYGK YLALSGVGESIQNR DI TQFLFQIGVFTA+PMILGFILE G
Sbjct: 3619 YIFLYGKTYLALSGVGESIQNRVDILQNTALNAALNTQFLFQIGVFTAIPMILGFILEFG 3798
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
VLTAFV FITMQFQ+CSVFFTFSLGTRTHYFGR ILHGGAKYRATGRGFVV
Sbjct: 3799 VLTAFVSFITMQFQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVV 3951
Score = 212 bits (457), Expect = 1e-053
Identities = 78/114 (68%), Positives = 93/114 (81%)
Frame = +2 / +3
Query: 14 QVHISLWENVSGLIWCWRINSK*SGYTAERSLECCSEHSISFPDWCIYCCSHDSWFHP*I 193
+VHISLWEN+SG +W WRINS+* GY AE SLEC SEH++SFPDWCIYC S+DS FHP I
Sbjct: 3615 RVHISLWENLSGFVWSWRINSE*GGYIAEHSLECSSEHTVSFPDWCIYCYSYDSGFHPGI 3794
Query: 194 RCFNGFCSVYYNAVPNVLCIFYFLTWNKNPLLWPCNITWRCKV*SNR*RFCGTS 355
C +GFC ++++AVP +LCIFYFL K+PL WP N TW CKV*SNR* FCGT+
Sbjct: 3795 WCLDGFCQLHHDAVPTLLCIFYFLPGYKDPLFWPHNTTWWCKV*SNR*GFCGTT 3956
Score = 194 bits (419), Expect = 3e-048
Identities = 83/111 (74%), Positives = 94/111 (84%)
Frame = -3 / -1
Query: 350 YHKTSTGCSILCTSM*YCTAKVVGSCSK*ESKKYRAHLELHCNKLNKSR*NT*FKDETKN 171
YHKT TGCSILCT+M*YC AK+VG C++ ESKKYRA LELH ++ +KSR +T F+DET+N
Sbjct: 3951 YHKTPTGCSILCTTM*YCAAKIVGPCTQGESKKYRAKLELHRDEADKSRQDTKFQDETQN 3772
Query: 170 HGNSSKYTNLEKKLSVQSSIQGCVLQYIRSILN*FSNTR*GQIHFPIEKYV 18
H NSSKYTNLEKKL VQS IQGCVLQYI ILN*FSN+R QI FPIEKYV
Sbjct: 3771 HRNSSKYTNLEKKLCVQSCIQGCVLQYIHPILN*FSNSRQSQIGFPIEKYV 3619
Score = 170 bits (366), Expect = 5e-041
Identities = 80/112 (71%), Positives = 87/112 (77%)
Frame = -2 / -3
Query: 351 VPQNLYRLLYTLHLHVILHGQSSGFLFQVRK*KIQSTFGTAL**TEQKPLKHLIQG*NQE 172
VPQN YRLLYTLH HV+L GQ+SG L+ RK*KIQS GTA **+ QKP +H I G*N E
Sbjct: 3952 VPQNPYRLLYTLHHHVVLCGQNSGSLYPGRK*KIQSKVGTAS**S*QKPSRHQIPG*NPE 3773
Query: 171 SWEQQ*IHQSGKEIECSEQHSRLRSAVYPLYFELILQHQIRPDTFSHREICT 16
S E Q*IHQSGKE CSE HSRL SA+YP Y ELILQ Q +PD FSHREICT
Sbjct: 3772 S*E*Q*IHQSGKETVCSELHSRLCSAIYPPYSELILQLQTKPDRFSHREICT 3617
Score = 78.0 bits (164), Expect(2) = 1e-028
Identities = 37/54 (68%), Positives = 39/54 (72%)
Frame = +1 / +2
Query: 190 NQVF*RLLFSLLQCSSKCALYFLLSHLEQEPTTLAVQYYMEVQSIEQPVEVLWY 351
N V *RLL + +CSS ALYFLLS Q PT LA QYYM VQSIEQPV VLWY
Sbjct: 3791 NLVS*RLLSASSRCSSNFALYFLLSPWVQGPTILAAQYYMVVQSIEQPVGVLWY 3952
Score = 71.2 bits (149), Expect(2) = 1e-028
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +1 / +2
Query: 19 TYFSMGKCIWPYLVLENQFKIERIYCRTQP*MLL*TLNFFSR 144
TYFSMGK IW L LENQF+I IYCRTQP*M L*T +FFSR
Sbjct: 3620 TYFSMGKPIWLCLELENQFRIGWIYCRTQP*MQL*THSFFSR 3745
>gb|AU062726.1|AU062726 AU062726 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C30350_1A, mRNA sequence
Length = 352
Score = 209 bits (450), Expect = 1e-052
Identities = 87/108 (80%), Positives = 92/108 (85%)
Frame = -1 / -1
Query: 340 PLPVALYFAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDSRMKPRIMGT 161
PLPVALYFAPPC+I RPK*WVLVP VKNTE WNCIV+ TKAVKTP+SRMKPRI
Sbjct: 325 PLPVALYFAPPCSIVRPK*WVLVPRXXVKNTEQSWNCIVMKLTKAVKTPNSRMKPRIXRI 146
Query: 160 AVNTPIWKRN*VFRAAFKAAFCSISALF*IDSPTPDKARYIFP*RNMY 17
AVNTPIWKRN VFRAAF A FC+IS LF*IDSPTPDKAR +FP*RNMY
Sbjct: 145 AVNTPIWKRNCVFRAAFXAVFCNISTLF*IDSPTPDKAR*VFP*RNMY 2
Score = 207 bits (446), Expect = 5e-052
Identities = 88/109 (80%), Positives = 90/109 (82%)
Frame = +3 / +3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
YIFLYGK YLALSGVGESIQNR DI TQFLFQIGVFTA+ MILGFILE G
Sbjct: 3 YIFLYGKTYLALSGVGESIQNRVDILQNTALNAALNTQFLFQIGVFTAIRMILGFILEFG 182
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGF 344
VLTAFV FITMQFQ+CSVF T SLGTRTHYFGR ILHGGAKYRATGRGF
Sbjct: 183 VLTAFVSFITMQFQLCSVFLTXSLGTRTHYFGRTILHGGAKYRATGRGF 329
Score = 187 bits (402), Expect = 6e-046
Identities = 70/107 (65%), Positives = 82/107 (76%)
Frame = +2 / +2
Query: 17 VHISLWENVSGLIWCWRINSK*SGYTAERSLECCSEHSISFPDWCIYCCSHDSWFHP*IR 196
VHISLWEN+SG +W WRINS+* GY AE S EC SEH++SFPDWCIYC S DS FHP I
Sbjct: 2 VHISLWENLSGFVWSWRINSE*GGYIAEHSXECSSEHTVSFPDWCIYCYSXDSXFHPGIW 181
Query: 197 CFNGFCSVYYNAVPNVLCIFYFLTWNKNPLLWPCNITWRCKV*SNR* 337
C +GFC ++++AVP +LCIF K+PL WP N TW CKV*SNR*
Sbjct: 182 CLDGFCQLHHDAVPTLLCIFNXXPGYKDPLFWPHNTTWWCKV*SNR* 322
Score = 174 bits (375), Expect = 3e-042
Identities = 77/109 (70%), Positives = 87/109 (79%)
Frame = -3 / -3
Query: 344 KTSTGCSILCTSM*YCTAKVVGSCSK*ESKKYRAHLELHCNKLNKSR*NT*FKDETKNHG 165
K TGCSILCT+M*YC AK+VG C++ S KYRA LELH ++ +KSR +T F+DET NH
Sbjct: 329 KPPTGCSILCTTM*YCAAKIVGPCTQGXS*KYRAKLELHRDEADKSRQDTKFQDETXNHX 150
Query: 164 NSSKYTNLEKKLSVQSSIQGCVLQYIRSILN*FSNTR*GQIHFPIEKYV 18
NSSKYTNLEKKL VQS IQ CVLQYI ILN*FSN+R QI FPIEKYV
Sbjct: 149 NSSKYTNLEKKLCVQSCIQXCVLQYIHPILN*FSNSRQSQIGFPIEKYV 3
Score = 152 bits (326), Expect = 2e-035
Identities = 72/107 (67%), Positives = 79/107 (73%)
Frame = -2 / -2
Query: 336 YRLLYTLHLHVILHGQSSGFLFQVRK*KIQSTFGTAL**TEQKPLKHLIQG*NQESWEQQ 157
YRLLYTLH HV+L GQ+SG L+ KIQS GTA **+ QKP +H I G*N ES E Q
Sbjct: 321 YRLLYTLHHHVVLCGQNSGSLYPGXXLKIQSKVGTAS**S*QKPSRHQIPG*NXESXE*Q 142
Query: 156 *IHQSGKEIECSEQHSRLRSAVYPLYFELILQHQIRPDTFSHREICT 16
*IHQSGKE CSE HS L SA+YP Y ELILQ Q +PD FSHREICT
Sbjct: 141 *IHQSGKETVCSELHSXLCSAIYPPYSELILQLQTKPDRFSHREICT 1
Score = 67.0 bits (140), Expect(2) = 5e-023
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +1 / +1
Query: 19 TYFSMGKCIWPYLVLENQFKIERIYCRTQP*MLL*TLNFFSR 144
TYFSMGK IW L LENQF+I IYCRTQ *M L*T +FFSR
Sbjct: 4 TYFSMGKPIWLCLELENQFRIGWIYCRTQX*MQL*THSFFSR 129
Score = 61.6 bits (128), Expect(2) = 5e-023
Identities = 31/49 (63%), Positives = 33/49 (67%)
Frame = +1 / +1
Query: 190 NQVF*RLLFSLLQCSSKCALYFLLSHLEQEPTTLAVQYYMEVQSIEQPV 336
N V *RLL + +CSS ALYF L Q PT LA QYYM VQSIEQPV
Sbjct: 175 NLVS*RLLSASSRCSSNFALYF*LXPWVQGPTILAAQYYMVVQSIEQPV 321
>gb|AACV01005773.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005773, whole
genome shotgun sequence
Length = 82514
Score = 111 bits (237), Expect(4) = 1e-041
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = -1 / -1
Query: 205 VKTPDSRMKPRIMGTAVNTPIWKRN*VFRAAFKAAFCSISALF*IDSPTPDKA 47
VKTP+SRMKPRI+G AVNTPIWKRN VFRAAFKA FC+IS LF*IDSPTPDKA
Sbjct: 24047 VKTPNSRMKPRIIGIAVNTPIWKRNCVFRAAFKAVFCNISTLF*IDSPTPDKA 23889
Score = 105 bits (223), Expect(4) = 3e-043
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = +2 / +3
Query: 47 GLIWCWRINSK*SGYTAERSLECCSEHSISFPDWCIYCCSHDSWFHP*IRCFNG 208
G +W WRINS+* GY AE SLEC SEH++SFPDWCIYC S+DS FHP I C +G
Sbjct: 23889 GFVWSWRINSE*GGYIAEHSLECSSEHTVSFPDWCIYCYSYDSGFHPGIWCLDG 24050
Score = 91.8 bits (194), Expect(3) = 4e-029
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = -3 / -3
Query: 206 R*NT*FKDETKNHGNSSKYTNLEKKLSVQSSIQGCVLQYIRSILN*FSNTR 54
R +T F+DET+NH NSSKYTNLEKKL VQS IQGCVLQYI ILN*FSN+R
Sbjct: 24048 RQDTKFQDETQNHRNSSKYTNLEKKLCVQSCIQGCVLQYIHPILN*FSNSR 23896
Score = 90.9 bits (192), Expect(4) = 3e-043
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +3 / +2
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAK 320
V AFV FITMQFQ+CSVFFTFSLGTRTHYFGR ILHGGAK
Sbjct: 24437 VTQAFVSFITMQFQLCSVFFTFSLGTRTHYFGRTILHGGAK 24559
Score = 90.9 bits (192), Expect(4) = 7e-032
Identities = 40/56 (71%), Positives = 42/56 (75%)
Frame = +3 / +1
Query: 48 ALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESGVLTAFV 215
ALSGVGESIQNR DI TQFLFQIGVFTA+PMILGFILE GVLT F+
Sbjct: 23890 ALSGVGESIQNRVDILQNTALNAALNTQFLFQIGVFTAIPMILGFILEFGVLTVFL 24057
Score = 79.4 bits (167), Expect(3) = 6e-023
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = -2 / -2
Query: 207 PLKHLIQG*NQESWEQQ*IHQSGKEIECSEQHSRLRSAVYPLYFELILQHQIRP 46
P +H I G*N ES E Q*IHQSGKE CSE HSRL SA+YP Y ELILQ Q +P
Sbjct: 24049 PSRHQIPG*NPES*E*Q*IHQSGKETVCSELHSRLCSAIYPPYSELILQLQTKP 23888
Score = 78.5 bits (165), Expect(4) = 1e-041
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -1 / -3
Query: 319 FAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKT 197
FAPPC+I RPK*WVLVP EKVKNTE WNCIV+ TKA T
Sbjct: 24558 FAPPCSIVRPK*WVLVPREKVKNTEQSWNCIVMKLTKACVT 24436
Score = 70.7 bits (148), Expect(4) = 7e-032
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +2 / +1
Query: 197 CFNGFCSVYYNAVPNVLCIFYFLTWNKNPLLWPCNITWRCK 319
C GFC ++++AVP +LCIFYFL K+PL WP N TW CK
Sbjct: 24436 CDTGFCQLHHDAVPTLLCIFYFLPGYKDPLFWPHNTTWWCK 24558
Score = 63.4 bits (132), Expect(3) = 4e-029
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = -3 / -2
Query: 320 LCTSM*YCTAKVVGSCSK*ESKKYRAHLELHCNKLNKS 207
LCT+M*YC AK+VG C++ ESKKYRA LELH ++ +KS
Sbjct: 24559 LCTTM*YCAAKIVGPCTQGESKKYRAKLELHRDEADKS 24446
Score = 55.6 bits (115), Expect(3) = 6e-023
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = -2 / -1
Query: 318 LHLHVILHGQSSGFLFQVRK*KIQSTFGTAL**TEQKPLKHL 193
LH HV+L GQ+SG L+ RK*KIQS GTA **+ QKP+ H+
Sbjct: 24557 LHHHVVLCGQNSGSLYPGRK*KIQSKVGTAS**S*QKPVSHI 24432
Score = 29.5 bits (58), Expect(4) = 1e-041
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 48 PDTFSHREICT 16
PD FSHREICT
Sbjct: 23298 PDRFSHREICT 23266
Score = 29.5 bits (58), Expect(4) = 3e-043
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +2
Query: 14 QVHISLWENVSG 49
+VHISLWEN+SG
Sbjct: 23264 RVHISLWENLSG 23299
Score = 28.6 bits (56), Expect(4) = 1e-041
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 350 YHKTSTGCSIL 318
YHKT TGCSIL
Sbjct: 24674 YHKTPTGCSIL 24642
Score = 28.1 bits (55), Expect(4) = 3e-043
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 313 VQSIEQPVEVLWY 351
+ SIEQPV VLWY
Sbjct: 24637 ITSIEQPVGVLWY 24675
Score = 27.2 bits (53), Expect(3) = 4e-029
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 349 TTKPLPVALYF 317
TTKPLPVALY+
Sbjct: 24673 TTKPLPVALYW 24641
Score = 27.2 bits (53), Expect(4) = 7e-032
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 318 KYRATGRGFVV 350
+YRATGRGFVV
Sbjct: 24642 QYRATGRGFVV 24674
Score = 26.3 bits (51), Expect(3) = 6e-023
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 351 VPQNLYRLLYT 319
VPQN YRLLYT
Sbjct: 24675 VPQNPYRLLYT 24643
Score = 25.8 bits (50), Expect(4) = 7e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 19 TYFSMGKCIW 48
TYFSMGK IW
Sbjct: 23269 TYFSMGKPIW 23298
>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11,
complete sequence
Length = 126827
Score = 111 bits (237), Expect(4) = 4e-041
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = -1 / -1
Query: 205 VKTPDSRMKPRIMGTAVNTPIWKRN*VFRAAFKAAFCSISALF*IDSPTPDKA 47
VKTP+SRMKPRI+G AVNTPIWKRN VFRAAFKA FC+IS LF*IDSPTPDKA
Sbjct: 72020 VKTPNSRMKPRIIGIAVNTPIWKRNCVFRAAFKAVFCNISTLF*IDSPTPDKA 71862
Score = 105 bits (223), Expect(4) = 1e-042
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = +2 / +3
Query: 47 GLIWCWRINSK*SGYTAERSLECCSEHSISFPDWCIYCCSHDSWFHP*IRCFNG 208
G +W WRINS+* GY AE SLEC SEH++SFPDWCIYC S+DS FHP I C +G
Sbjct: 71862 GFVWSWRINSE*GGYIAEHSLECSSEHTVSFPDWCIYCYSYDSGFHPGIWCLDG 72023
Score = 91.8 bits (194), Expect(3) = 9e-029
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = -3 / -3
Query: 206 R*NT*FKDETKNHGNSSKYTNLEKKLSVQSSIQGCVLQYIRSILN*FSNTR 54
R +T F+DET+NH NSSKYTNLEKKL VQS IQGCVLQYI ILN*FSN+R
Sbjct: 72021 RQDTKFQDETQNHRNSSKYTNLEKKLCVQSCIQGCVLQYIHPILN*FSNSR 71869
Score = 90.9 bits (192), Expect(4) = 1e-042
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +3 / +2
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAK 320
V AFV FITMQFQ+CSVFFTFSLGTRTHYFGR ILHGGAK
Sbjct: 72410 VTQAFVSFITMQFQLCSVFFTFSLGTRTHYFGRTILHGGAK 72532
Score = 90.9 bits (192), Expect(4) = 2e-031
Identities = 40/56 (71%), Positives = 42/56 (75%)
Frame = +3 / +1
Query: 48 ALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESGVLTAFV 215
ALSGVGESIQNR DI TQFLFQIGVFTA+PMILGFILE GVLT F+
Sbjct: 71863 ALSGVGESIQNRVDILQNTALNAALNTQFLFQIGVFTAIPMILGFILEFGVLTVFL 72030
Score = 79.4 bits (167), Expect(3) = 1e-022
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = -2 / -2
Query: 207 PLKHLIQG*NQESWEQQ*IHQSGKEIECSEQHSRLRSAVYPLYFELILQHQIRP 46
P +H I G*N ES E Q*IHQSGKE CSE HSRL SA+YP Y ELILQ Q +P
Sbjct: 72022 PSRHQIPG*NPES*E*Q*IHQSGKETVCSELHSRLCSAIYPPYSELILQLQTKP 71861
Score = 78.5 bits (165), Expect(4) = 4e-041
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -1 / -3
Query: 319 FAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKT 197
FAPPC+I RPK*WVLVP EKVKNTE WNCIV+ TKA T
Sbjct: 72531 FAPPCSIVRPK*WVLVPREKVKNTEQSWNCIVMKLTKACVT 72409
Score = 70.7 bits (148), Expect(4) = 2e-031
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +2 / +1
Query: 197 CFNGFCSVYYNAVPNVLCIFYFLTWNKNPLLWPCNITWRCK 319
C GFC ++++AVP +LCIFYFL K+PL WP N TW CK
Sbjct: 72409 CDTGFCQLHHDAVPTLLCIFYFLPGYKDPLFWPHNTTWWCK 72531
Score = 63.4 bits (132), Expect(3) = 9e-029
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = -3 / -2
Query: 320 LCTSM*YCTAKVVGSCSK*ESKKYRAHLELHCNKLNKS 207
LCT+M*YC AK+VG C++ ESKKYRA LELH ++ +KS
Sbjct: 72532 LCTTM*YCAAKIVGPCTQGESKKYRAKLELHRDEADKS 72419
Score = 55.6 bits (115), Expect(3) = 1e-022
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = -2 / -1
Query: 318 LHLHVILHGQSSGFLFQVRK*KIQSTFGTAL**TEQKPLKHL 193
LH HV+L GQ+SG L+ RK*KIQS GTA **+ QKP+ H+
Sbjct: 72530 LHHHVVLCGQNSGSLYPGRK*KIQSKVGTAS**S*QKPVSHI 72405
Score = 29.5 bits (58), Expect(4) = 1e-042
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +2
Query: 14 QVHISLWENVSG 49
+VHISLWEN+SG
Sbjct: 71237 RVHISLWENLSG 71272
Score = 29.5 bits (58), Expect(4) = 4e-041
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 48 PDTFSHREICT 16
PD FSHREICT
Sbjct: 71271 PDRFSHREICT 71239
Score = 28.6 bits (56), Expect(4) = 4e-041
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 350 YHKTSTGCSIL 318
YHKT TGCSIL
Sbjct: 72647 YHKTPTGCSIL 72615
Score = 28.1 bits (55), Expect(4) = 1e-042
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 313 VQSIEQPVEVLWY 351
+ SIEQPV VLWY
Sbjct: 72610 ITSIEQPVGVLWY 72648
Score = 27.2 bits (53), Expect(4) = 2e-031
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 318 KYRATGRGFVV 350
+YRATGRGFVV
Sbjct: 72615 QYRATGRGFVV 72647
Score = 27.2 bits (53), Expect(3) = 9e-029
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 349 TTKPLPVALYF 317
TTKPLPVALY+
Sbjct: 72646 TTKPLPVALYW 72614
Score = 26.3 bits (51), Expect(3) = 1e-022
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 351 VPQNLYRLLYT 319
VPQN YRLLYT
Sbjct: 72648 VPQNPYRLLYT 72616
Score = 25.8 bits (50), Expect(4) = 2e-031
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 19 TYFSMGKCIW 48
TYFSMGK IW
Sbjct: 71242 TYFSMGKPIW 71271
>ref|XM_550490.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 5316
Score = 176 bits (378), Expect = 1e-042
Identities = 74/111 (66%), Positives = 81/111 (72%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
YIFLYG++YLALSG+ I + QFL QIG+FTAVPMI+GFILE G
Sbjct: 4072 YIFLYGRVYLALSGLDYEISRQFRFLGNTALDAALNAQFLVQIGIFTAVPMIMGFILELG 4251
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+L A FITMQ Q CSVFFTFSLGTRTHYFGR ILHGGAKY ATGRGFVV
Sbjct: 4252 LLKAIFSFITMQLQFCSVFFTFSLGTRTHYFGRTILHGGAKYHATGRGFVV 4404
Score = 114 bits (243), Expect = 5e-024
Identities = 52/84 (61%), Positives = 59/84 (70%)
Frame = -1 / -2
Query: 349 TTKPLPVALYFAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDSRMKPRI 170
TTKPLPVA YFAPP +I PK* VLVP E VKNTE +CIVI A +P S+MKP I
Sbjct: 4403 TTKPLPVA*YFAPP*SIVLPK*CVLVPRENVKNTEQNCSCIVIKLKIAFSSPSSKMKPII 4224
Query: 169 MGTAVNTPIWKRN*VFRAAFKAAF 98
+GTAV PIW +N* F+AA A F
Sbjct: 4223 IGTAVKIPIWTKN*AFKAASSAVF 4152
>gb|CB684140.1|CB684140 OSJNEf13F24.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf13F24 5', mRNA sequence
Length = 710
Score = 167 bits (360), Expect = 4e-040
Identities = 71/111 (63%), Positives = 79/111 (71%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
YIFLYG++YLALSG+ I + QFL QIG+FTAVPMI+GFILE G
Sbjct: 169 YIFLYGRVYLALSGLDYEISRQFRFLGNTALDAALNAQFLVQIGIFTAVPMIMGFILELG 348
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+L A +FITMQ CSVFFTFSLGT THYFGR ILHGGAKY ATG GFVV
Sbjct: 349 LLKAIFRFITMQLHFCSVFFTFSLGTITHYFGRTILHGGAKYHATGTGFVV 501
Score = 114 bits (244), Expect = 4e-024
Identities = 51/84 (60%), Positives = 60/84 (71%)
Frame = -1 / -1
Query: 349 TTKPLPVALYFAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDSRMKPRI 170
TTKP+PVA YFAPP +I PK* V+VP E VKNTE +CIVIN A +P S+MKP I
Sbjct: 500 TTKPVPVA*YFAPP*SIVLPK*CVIVPRENVKNTEQKCSCIVINLKIAFSSPSSKMKPII 321
Query: 169 MGTAVNTPIWKRN*VFRAAFKAAF 98
+GTAV PIW +N* F+AA A F
Sbjct: 320 IGTAVKIPIWTKN*AFKAASSAVF 249
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 134 bits (288), Expect = 3e-030
Identities = 56/111 (50%), Positives = 74/111 (66%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ E + + +Q L Q+G A+PM++ LE G
Sbjct: 1563882 YVFLYGRLYLALSGLEEGLLTQRRYIHNHPLQVALASQSLVQLGFLMALPMMMEIGLEKG 1563703
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
A +FI M Q+ +VFFTFSLGT+THY+GR +LHGGA+YRATGRGFVV
Sbjct: 1563702 FGQALSEFIMMNLQLAAVFFTFSLGTKTHYYGRMLLHGGAQYRATGRGFVV 1563550
Score = 111 bits (237), Expect(3) = 2e-037
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = -1 / -1
Query: 205 VKTPDSRMKPRIMGTAVNTPIWKRN*VFRAAFKAAFCSISALF*IDSPTPDKA 47
VKTP+SRMKPRI+G AVNTPIWKRN VFRAAFKA FC+IS LF*IDSPTPDKA
Sbjct: 1051803 VKTPNSRMKPRIIGIAVNTPIWKRNCVFRAAFKAVFCNISTLF*IDSPTPDKA 1051645
Score = 105 bits (223), Expect(3) = 3e-039
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = +2 / +1
Query: 47 GLIWCWRINSK*SGYTAERSLECCSEHSISFPDWCIYCCSHDSWFHP*IRCFNG 208
G +W WRINS+* GY AE SLEC SEH++SFPDWCIYC S+DS FHP I C +G
Sbjct: 1051645 GFVWSWRINSE*GGYIAEHSLECSSEHTVSFPDWCIYCYSYDSGFHPGIWCLDG 1051806
Score = 91.8 bits (194), Expect(2) = 6e-027
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = -3 / -3
Query: 206 R*NT*FKDETKNHGNSSKYTNLEKKLSVQSSIQGCVLQYIRSILN*FSNTR 54
R +T F+DET+NH NSSKYTNLEKKL VQS IQGCVLQYI ILN*FSN+R
Sbjct: 1051804 RQDTKFQDETQNHRNSSKYTNLEKKLCVQSCIQGCVLQYIHPILN*FSNSR 1051652
Score = 90.9 bits (192), Expect(3) = 3e-039
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +3 / +3
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAK 320
V AFV FITMQFQ+CSVFFTFSLGTRTHYFGR ILHGGAK
Sbjct: 1052193 VTQAFVSFITMQFQLCSVFFTFSLGTRTHYFGRTILHGGAK 1052315
Score = 90.9 bits (192), Expect(2) = 8e-029
Identities = 40/56 (71%), Positives = 42/56 (75%)
Frame = +3 / +2
Query: 48 ALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESGVLTAFV 215
ALSGVGESIQNR DI TQFLFQIGVFTA+PMILGFILE GVLT F+
Sbjct: 1051646 ALSGVGESIQNRVDILQNTALNAALNTQFLFQIGVFTAIPMILGFILEFGVLTVFL 1051813
Score = 79.4 bits (167), Expect(2) = 6e-021
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = -2 / -2
Query: 207 PLKHLIQG*NQESWEQQ*IHQSGKEIECSEQHSRLRSAVYPLYFELILQHQIRP 46
P +H I G*N ES E Q*IHQSGKE CSE HSRL SA+YP Y ELILQ Q +P
Sbjct: 1051805 PSRHQIPG*NPES*E*Q*IHQSGKETVCSELHSRLCSAIYPPYSELILQLQTKP 1051644
Score = 78.5 bits (165), Expect(3) = 2e-037
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -1 / -3
Query: 319 FAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKT 197
FAPPC+I RPK*WVLVP EKVKNTE WNCIV+ TKA T
Sbjct: 1052314 FAPPCSIVRPK*WVLVPREKVKNTEQSWNCIVMKLTKACVT 1052192
Score = 70.7 bits (148), Expect(2) = 8e-029
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +2 / +2
Query: 197 CFNGFCSVYYNAVPNVLCIFYFLTWNKNPLLWPCNITWRCK 319
C GFC ++++AVP +LCIFYFL K+PL WP N TW CK
Sbjct: 1052192 CDTGFCQLHHDAVPTLLCIFYFLPGYKDPLFWPHNTTWWCK 1052314
Score = 63.4 bits (132), Expect(2) = 6e-027
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = -3 / -2
Query: 320 LCTSM*YCTAKVVGSCSK*ESKKYRAHLELHCNKLNKS 207
LCT+M*YC AK+VG C++ ESKKYRA LELH ++ +KS
Sbjct: 1052315 LCTTM*YCAAKIVGPCTQGESKKYRAKLELHRDEADKS 1052202
Score = 55.6 bits (115), Expect(2) = 6e-021
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = -2 / -1
Query: 318 LHLHVILHGQSSGFLFQVRK*KIQSTFGTAL**TEQKPLKHL 193
LH HV+L GQ+SG L+ RK*KIQS GTA **+ QKP+ H+
Sbjct: 1052313 LHHHVVLCGQNSGSLYPGRK*KIQSKVGTAS**S*QKPVSHI 1052188
Score = 29.5 bits (58), Expect(3) = 3e-039
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +3
Query: 14 QVHISLWENVSG 49
+VHISLWEN+SG
Sbjct: 1051020 RVHISLWENLSG 1051055
Score = 29.5 bits (58), Expect(3) = 2e-037
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 48 PDTFSHREICT 16
PD FSHREICT
Sbjct: 1051054 PDRFSHREICT 1051022
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 134 bits (288), Expect = 3e-030
Identities = 56/111 (50%), Positives = 74/111 (66%)
Frame = +3 / -2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ E + + +Q L Q+G A+PM++ LE G
Sbjct: 1569938 YVFLYGRLYLALSGLEEGLLTQRRYIHNHPLQVALASQSLVQLGFLMALPMMMEIGLEKG 1569759
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
A +FI M Q+ +VFFTFSLGT+THY+GR +LHGGA+YRATGRGFVV
Sbjct: 1569758 FGQALSEFIMMNLQLAAVFFTFSLGTKTHYYGRMLLHGGAQYRATGRGFVV 1569606
Score = 111 bits (237), Expect(2) = 2e-036
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = -1 / -1
Query: 205 VKTPDSRMKPRIMGTAVNTPIWKRN*VFRAAFKAAFCSISALF*IDSPTPDKA 47
VKTP+SRMKPRI+G AVNTPIWKRN VFRAAFKA FC+IS LF*IDSPTPDKA
Sbjct: 1049982 VKTPNSRMKPRIIGIAVNTPIWKRNCVFRAAFKAVFCNISTLF*IDSPTPDKA 1049824
Score = 105 bits (223), Expect(2) = 4e-038
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = +2 / +1
Query: 47 GLIWCWRINSK*SGYTAERSLECCSEHSISFPDWCIYCCSHDSWFHP*IRCFNG 208
G +W WRINS+* GY AE SLEC SEH++SFPDWCIYC S+DS FHP I C +G
Sbjct: 1049824 GFVWSWRINSE*GGYIAEHSLECSSEHTVSFPDWCIYCYSYDSGFHPGIWCLDG 1049985
Score = 91.8 bits (194), Expect(2) = 5e-026
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = -3 / -3
Query: 206 R*NT*FKDETKNHGNSSKYTNLEKKLSVQSSIQGCVLQYIRSILN*FSNTR 54
R +T F+DET+NH NSSKYTNLEKKL VQS IQGCVLQYI ILN*FSN+R
Sbjct: 1049983 RQDTKFQDETQNHRNSSKYTNLEKKLCVQSCIQGCVLQYIHPILN*FSNSR 1049831
Score = 90.9 bits (192), Expect(2) = 4e-038
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +3 / +3
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAK 320
V AFV FITMQFQ+CSVFFTFSLGTRTHYFGR ILHGGAK
Sbjct: 1050372 VTQAFVSFITMQFQLCSVFFTFSLGTRTHYFGRTILHGGAK 1050494
Score = 90.9 bits (192), Expect(2) = 6e-028
Identities = 40/56 (71%), Positives = 42/56 (75%)
Frame = +3 / +2
Query: 48 ALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESGVLTAFV 215
ALSGVGESIQNR DI TQFLFQIGVFTA+PMILGFILE GVLT F+
Sbjct: 1049825 ALSGVGESIQNRVDILQNTALNAALNTQFLFQIGVFTAIPMILGFILEFGVLTVFL 1049992
Score = 78.5 bits (165), Expect(2) = 2e-036
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -1 / -3
Query: 319 FAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKT 197
FAPPC+I RPK*WVLVP EKVKNTE WNCIV+ TKA T
Sbjct: 1050493 FAPPCSIVRPK*WVLVPREKVKNTEQSWNCIVMKLTKACVT 1050371
Score = 70.7 bits (148), Expect(2) = 6e-028
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +2 / +2
Query: 197 CFNGFCSVYYNAVPNVLCIFYFLTWNKNPLLWPCNITWRCK 319
C GFC ++++AVP +LCIFYFL K+PL WP N TW CK
Sbjct: 1050371 CDTGFCQLHHDAVPTLLCIFYFLPGYKDPLFWPHNTTWWCK 1050493
Score = 63.4 bits (132), Expect(2) = 5e-026
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = -3 / -2
Query: 320 LCTSM*YCTAKVVGSCSK*ESKKYRAHLELHCNKLNKS 207
LCT+M*YC AK+VG C++ ESKKYRA LELH ++ +KS
Sbjct: 1050494 LCTTM*YCAAKIVGPCTQGESKKYRAKLELHRDEADKS 1050381
>dbj|AK071856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122H24, full
insert sequence
Length = 1399
Score = 149 bits (320), Expect = 1e-034
Identities = 61/74 (82%), Positives = 64/74 (86%)
Frame = +3 / +3
Query: 129 QFLFQIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILH 308
QFL QIG+FTAVPMI+GFILE G+L A FITMQ Q CSVFFTFSLGTRTHYFGR ILH
Sbjct: 36 QFLVQIGIFTAVPMIMGFILELGLLKAIFSFITMQLQFCSVFFTFSLGTRTHYFGRTILH 215
Query: 309 GGAKYRATGRGFVV 350
GGAKY ATGRGFVV
Sbjct: 216 GGAKYHATGRGFVV 257
Score = 114 bits (243), Expect = 5e-024
Identities = 52/84 (61%), Positives = 59/84 (70%)
Frame = -1 / -1
Query: 349 TTKPLPVALYFAPPCNIARPK*WVLVPSEKVKNTEHIWNCIVIN*TKAVKTPDSRMKPRI 170
TTKPLPVA YFAPP +I PK* VLVP E VKNTE +CIVI A +P S+MKP I
Sbjct: 256 TTKPLPVA*YFAPP*SIVLPK*CVLVPRENVKNTEQNCSCIVIKLKIAFSSPSSKMKPII 77
Query: 169 MGTAVNTPIWKRN*VFRAAFKAAF 98
+GTAV PIW +N* F+AA A F
Sbjct: 76 IGTAVKIPIWTKN*AFKAASSAVF 5
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome
Length = 490520
Score = 148 bits (318), Expect = 2e-034
Identities = 61/111 (54%), Positives = 78/111 (70%)
Frame = +3 / -2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ +I +A + +Q + Q+G+ A+PM +G LE G
Sbjct: 300472 YVFLYGRLYLALSGLEFAIMKQARMRGNRALQAAMGSQSIVQLGLLMALPMFMGIGLERG 300293
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+A FI MQ Q+CSVFFTF LGT++HYFGR ILHGGAKYRATGRGFVV
Sbjct: 300292 FRSALGDFIIMQLQLCSVFFTFYLGTKSHYFGRTILHGGAKYRATGRGFVV 300140
>dbj|AK060407.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-D06, full
insert sequence
Length = 1749
Score = 147 bits (315), Expect = 6e-034
Identities = 61/111 (54%), Positives = 76/111 (68%)
Frame = +3 / +2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G+ YLALSG+ I + + QF+ Q+G+FTA+PMI+ LE G
Sbjct: 179 YAFVWGRFYLALSGLEAFISSNTNSTNNAALGAVLNQQFVIQLGIFTALPMIIENSLEHG 358
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
LTA FI MQ Q SVF+TFS+GT+THY+GR ILHGGAKYRATGRGFVV
Sbjct: 359 FLTAVWDFIKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVV 511
>gb|AACV01002091.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002091, whole
genome shotgun sequence
Length = 57249
Score = 147 bits (315), Expect = 6e-034
Identities = 61/111 (54%), Positives = 76/111 (68%)
Frame = +3 / +3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G+ YLALSG+ I + + QF+ Q+G+FTA+PMI+ LE G
Sbjct: 41520 YAFVWGRFYLALSGLEAFISSNTNSTNNAALGAVLNQQFVIQLGIFTALPMIIENSLEHG 41699
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
LTA FI MQ Q SVF+TFS+GT+THY+GR ILHGGAKYRATGRGFVV
Sbjct: 41700 FLTAVWDFIKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVV 41852
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 147 bits (315), Expect = 6e-034
Identities = 61/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G+ YLALSG+ I + + QF+ Q+G+FTA+PMI+ LE G
Sbjct: 27682389 YAFVWGRFYLALSGLEAFISSNTNSTNNAALGAVLNQQFVIQLGIFTALPMIIENSLEHG 27682210
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
LTA FI MQ Q SVF+TFS+GT+THY+GR ILHGGAKYRATGRGFVV
Sbjct: 27682209 FLTAVWDFIKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVV 27682057
Score = 145 bits (311), Expect = 2e-033
Identities = 60/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G+FTA+PMI+ LE G
Sbjct: 31717944 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQG 31717765
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 31717764 FLPAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 31717612
Score = 140 bits (300), Expect = 7e-032
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +SI I TQ +FQ+G+ +PM++ LE G
Sbjct: 19380088 YVFLYGRLYLVLSGLEKSILQDPQIKNIKPFENALATQSIFQLGMLLVLPMMIEVGLEKG 19379909
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
A +F+ MQ Q+ SVFFTF LGT+THY+GR ILHGGAKYR TGRGFVV
Sbjct: 19379908 FGRALGEFVIMQLQLASVFFTFHLGTKTHYYGRTILHGGAKYRGTGRGFVV 19379756
Score = 115 bits (245), Expect = 3e-024
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +3 / -1
Query: 126 TQFLFQIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAIL 305
+Q FQ+G+ +PM++ LE G TA +F+ MQ Q+ SVFFTF LGT+THY+GR IL
Sbjct: 19334895 SQSFFQLGLLLVLPMVMEVGLEKGFRTALGEFVIMQLQLASVFFTFQLGTKTHYYGRTIL 19334716
Query: 306 HGGAKYRATGRGFVV 350
HGGAKYR TGRGFVV
Sbjct: 19334715 HGGAKYRPTGRGFVV 19334671
>ref|NM_191973.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 5310
Score = 147 bits (315), Expect = 6e-034
Identities = 61/111 (54%), Positives = 76/111 (68%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G+ YLALSG+ I + + QF+ Q+G+FTA+PMI+ LE G
Sbjct: 4057 YAFVWGRFYLALSGLEAFISSNTNSTNNAALGAVLNQQFVIQLGIFTALPMIIENSLEHG 4236
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
LTA FI MQ Q SVF+TFS+GT+THY+GR ILHGGAKYRATGRGFVV
Sbjct: 4237 FLTAVWDFIKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVV 4389
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 147 bits (315), Expect = 6e-034
Identities = 61/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G+ YLALSG+ I + + QF+ Q+G+FTA+PMI+ LE G
Sbjct: 2129772 YAFVWGRFYLALSGLEAFISSNTNSTNNAALGAVLNQQFVIQLGIFTALPMIIENSLEHG 2129593
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
LTA FI MQ Q SVF+TFS+GT+THY+GR ILHGGAKYRATGRGFVV
Sbjct: 2129592 FLTAVWDFIKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVV 2129440
Score = 145 bits (311), Expect = 2e-033
Identities = 60/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G+FTA+PMI+ LE G
Sbjct: 6165327 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQG 6165148
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 6165147 FLPAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 6164995
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0007F06
Length = 150817
Score = 147 bits (315), Expect = 6e-034
Identities = 61/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G+ YLALSG+ I + + QF+ Q+G+FTA+PMI+ LE G
Sbjct: 69013 YAFVWGRFYLALSGLEAFISSNTNSTNNAALGAVLNQQFVIQLGIFTALPMIIENSLEHG 68834
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
LTA FI MQ Q SVF+TFS+GT+THY+GR ILHGGAKYRATGRGFVV
Sbjct: 68833 FLTAVWDFIKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVV 68681
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0485G01
Length = 167203
Score = 147 bits (315), Expect = 6e-034
Identities = 61/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G+ YLALSG+ I + + QF+ Q+G+FTA+PMI+ LE G
Sbjct: 10285 YAFVWGRFYLALSGLEAFISSNTNSTNNAALGAVLNQQFVIQLGIFTALPMIIENSLEHG 10106
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
LTA FI MQ Q SVF+TFS+GT+THY+GR ILHGGAKYRATGRGFVV
Sbjct: 10105 FLTAVWDFIKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVV 9953
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 147 bits (315), Expect = 6e-034
Identities = 61/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G+ YLALSG+ I + + QF+ Q+G+FTA+PMI+ LE G
Sbjct: 2070223 YAFVWGRFYLALSGLEAFISSNTNSTNNAALGAVLNQQFVIQLGIFTALPMIIENSLEHG 2070044
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
LTA FI MQ Q SVF+TFS+GT+THY+GR ILHGGAKYRATGRGFVV
Sbjct: 2070043 FLTAVWDFIKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVV 2069891
Score = 145 bits (311), Expect = 2e-033
Identities = 60/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G+FTA+PMI+ LE G
Sbjct: 6067970 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQG 6067791
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 6067790 FLPAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 6067638
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 147 bits (315), Expect = 6e-034
Identities = 61/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G+ YLALSG+ I + + QF+ Q+G+FTA+PMI+ LE G
Sbjct: 27271944 YAFVWGRFYLALSGLEAFISSNTNSTNNAALGAVLNQQFVIQLGIFTALPMIIENSLEHG 27271765
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
LTA FI MQ Q SVF+TFS+GT+THY+GR ILHGGAKYRATGRGFVV
Sbjct: 27271764 FLTAVWDFIKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVV 27271612
Score = 145 bits (311), Expect = 2e-033
Identities = 60/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G+FTA+PMI+ LE G
Sbjct: 31269691 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQG 31269512
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 31269511 FLPAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 31269359
Score = 140 bits (300), Expect = 7e-032
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +SI I TQ +FQ+G+ +PM++ LE G
Sbjct: 19056874 YVFLYGRLYLVLSGLEKSILQDPQIKNIKPFENALATQSIFQLGMLLVLPMMIEVGLEKG 19056695
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
A +F+ MQ Q+ SVFFTF LGT+THY+GR ILHGGAKYR TGRGFVV
Sbjct: 19056694 FGRALGEFVIMQLQLASVFFTFHLGTKTHYYGRTILHGGAKYRGTGRGFVV 19056542
Score = 115 bits (245), Expect = 3e-024
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +3 / -3
Query: 126 TQFLFQIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAIL 305
+Q FQ+G+ +PM++ LE G TA +F+ MQ Q+ SVFFTF LGT+THY+GR IL
Sbjct: 19011136 SQSFFQLGLLLVLPMVMEVGLEKGFRTALGEFVIMQLQLASVFFTFQLGTKTHYYGRTIL 19010957
Query: 306 HGGAKYRATGRGFVV 350
HGGAKYR TGRGFVV
Sbjct: 19010956 HGGAKYRPTGRGFVV 19010912
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 147 bits (315), Expect = 6e-034
Identities = 61/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G+ YLALSG+ I + + QF+ Q+G+FTA+PMI+ LE G
Sbjct: 27601719 YAFVWGRFYLALSGLEAFISSNTNSTNNAALGAVLNQQFVIQLGIFTALPMIIENSLEHG 27601540
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
LTA FI MQ Q SVF+TFS+GT+THY+GR ILHGGAKYRATGRGFVV
Sbjct: 27601539 FLTAVWDFIKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRATGRGFVV 27601387
Score = 145 bits (311), Expect = 2e-033
Identities = 60/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G+FTA+PMI+ LE G
Sbjct: 31637274 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQG 31637095
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 31637094 FLPAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 31636942
Score = 140 bits (300), Expect = 7e-032
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +SI I TQ +FQ+G+ +PM++ LE G
Sbjct: 19301371 YVFLYGRLYLVLSGLEKSILQDPQIKNIKPFENALATQSIFQLGMLLVLPMMIEVGLEKG 19301192
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
A +F+ MQ Q+ SVFFTF LGT+THY+GR ILHGGAKYR TGRGFVV
Sbjct: 19301191 FGRALGEFVIMQLQLASVFFTFHLGTKTHYYGRTILHGGAKYRGTGRGFVV 19301039
Score = 115 bits (245), Expect = 3e-024
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +3 / -1
Query: 126 TQFLFQIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAIL 305
+Q FQ+G+ +PM++ LE G TA +F+ MQ Q+ SVFFTF LGT+THY+GR IL
Sbjct: 19256178 SQSFFQLGLLLVLPMVMEVGLEKGFRTALGEFVIMQLQLASVFFTFQLGTKTHYYGRTIL 19255999
Query: 306 HGGAKYRATGRGFVV 350
HGGAKYR TGRGFVV
Sbjct: 19255998 HGGAKYRPTGRGFVV 19255954
>dbj|AG209222.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE5045_0_101_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE5045, genomic survey sequence
Length = 660
Score = 146 bits (314), Expect = 8e-034
Identities = 60/111 (54%), Positives = 78/111 (70%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ +I +A + +Q + Q+G+ A+PM + LE G
Sbjct: 475 YVFLYGRLYLALSGLELAIMKQARMRGNTALQAAMGSQSIVQLGLLMALPMFMEIGLERG 296
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+A FI MQ Q+CSVFFTFSLGT++HYFGR ILHGGAKY+ATGRGFVV
Sbjct: 295 FRSALGDFIIMQLQLCSVFFTFSLGTKSHYFGRTILHGGAKYKATGRGFVV 143
>dbj|AG211728.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF5036_0_402_1A,
3' flanking sequence of Tos17 insertion in rice strain
NF5036, genomic survey sequence
Length = 550
Score = 146 bits (314), Expect = 8e-034
Identities = 60/111 (54%), Positives = 78/111 (70%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ +I +A + +Q + Q+G+ A+PM + LE G
Sbjct: 497 YVFLYGRLYLALSGLELAIMKQARMRGNTALQAAMGSQSIVQLGLLMALPMFMEIGLERG 318
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+A FI MQ Q+CSVFFTFSLGT++HYFGR ILHGGAKY+ATGRGFVV
Sbjct: 317 FRSALGDFIIMQLQLCSVFFTFSLGTKSHYFGRTILHGGAKYKATGRGFVV 165
>dbj|AP003454.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone P0499E08, ***
SEQUENCING IN PROGRESS ***
Length = 85150
Score = 146 bits (314), Expect = 8e-034
Identities = 60/111 (54%), Positives = 78/111 (70%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ +I +A + +Q + Q+G+ A+PM + LE G
Sbjct: 41690 YVFLYGRLYLALSGLELAIMKQARMRGNTALQAAMGSQSIVQLGLLMALPMFMEIGLERG 41511
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+A FI MQ Q+CSVFFTFSLGT++HYFGR ILHGGAKY+ATGRGFVV
Sbjct: 41510 FRSALGDFIIMQLQLCSVFFTFSLGTKSHYFGRTILHGGAKYKATGRGFVV 41358
>dbj|AK100271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069L11, full
insert sequence
Length = 2442
Score = 146 bits (314), Expect = 8e-034
Identities = 60/111 (54%), Positives = 78/111 (70%)
Frame = +3 / +3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ +I +A + +Q + Q+G+ A+PM + LE G
Sbjct: 2091 YVFLYGRLYLALSGLELAIMKQARMRGNTALQAAMGSQSIVQLGLLMALPMFMEIGLERG 2270
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+A FI MQ Q+CSVFFTFSLGT++HYFGR ILHGGAKY+ATGRGFVV
Sbjct: 2271 FRSALGDFIIMQLQLCSVFFTFSLGTKSHYFGRTILHGGAKYKATGRGFVV 2423
>gb|AACV01013162.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013162, whole
genome shotgun sequence
Length = 37554
Score = 146 bits (314), Expect = 8e-034
Identities = 60/111 (54%), Positives = 78/111 (70%)
Frame = +3 / +3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ +I +A + +Q + Q+G+ A+PM + LE G
Sbjct: 36168 YVFLYGRLYLALSGLELAIMKQARMRGNTALQAAMGSQSIVQLGLLMALPMFMEIGLERG 36347
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+A FI MQ Q+CSVFFTFSLGT++HYFGR ILHGGAKY+ATGRGFVV
Sbjct: 36348 FRSALGDFIIMQLQLCSVFFTFSLGTKSHYFGRTILHGGAKYKATGRGFVV 36500
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0036B04
Length = 136159
Score = 146 bits (314), Expect = 8e-034
Identities = 60/111 (54%), Positives = 78/111 (70%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ +I +A + +Q + Q+G+ A+PM + LE G
Sbjct: 14159 YVFLYGRLYLALSGLELAIMKQARMRGNTALQAAMGSQSIVQLGLLMALPMFMEIGLERG 13980
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+A FI MQ Q+CSVFFTFSLGT++HYFGR ILHGGAKY+ATGRGFVV
Sbjct: 13979 FRSALGDFIIMQLQLCSVFFTFSLGTKSHYFGRTILHGGAKYKATGRGFVV 13827
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0019L07
Length = 131650
Score = 146 bits (314), Expect = 8e-034
Identities = 60/111 (54%), Positives = 78/111 (70%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ +I +A + +Q + Q+G+ A+PM + LE G
Sbjct: 124553 YVFLYGRLYLALSGLELAIMKQARMRGNTALQAAMGSQSIVQLGLLMALPMFMEIGLERG 124374
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+A FI MQ Q+CSVFFTFSLGT++HYFGR ILHGGAKY+ATGRGFVV
Sbjct: 124373 FRSALGDFIIMQLQLCSVFFTFSLGTKSHYFGRTILHGGAKYKATGRGFVV 124221
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 146 bits (314), Expect = 8e-034
Identities = 60/111 (54%), Positives = 78/111 (70%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ +I +A + +Q + Q+G+ A+PM + LE G
Sbjct: 3913479 YVFLYGRLYLALSGLELAIMKQARMRGNTALQAAMGSQSIVQLGLLMALPMFMEIGLERG 3913300
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+A FI MQ Q+CSVFFTFSLGT++HYFGR ILHGGAKY+ATGRGFVV
Sbjct: 3913299 FRSALGDFIIMQLQLCSVFFTFSLGTKSHYFGRTILHGGAKYKATGRGFVV 3913147
Score = 84.5 bits (178), Expect(4) = 4e-030
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = +3 / -2
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAK 320
VL A FITMQ Q CSVFFTFSLGTRTHYFGR ILHGGAK
Sbjct: 619409 VLQAIFSFITMQLQFCSVFFTFSLGTRTHYFGRTILHGGAK 619287
Score = 54.7 bits (113), Expect(4) = 4e-030
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +3 / -2
Query: 48 ALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESGVL 203
ALSG+ I + QFL QIG+FTAVPMI+GFILE G+L
Sbjct: 619673 ALSGLDYEISRQFRFLGNTALDAALNAQFLVQIGIFTAVPMIMGFILELGLL 619518
Score = 24.9 bits (48), Expect(4) = 4e-030
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 318 KYRATGRGFVV 350
+Y ATGRGFVV
Sbjct: 619215 QYHATGRGFVV 619183
Score = 24.9 bits (48), Expect(4) = 4e-030
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3 / -2
Query: 18 YIFLYGKMYL 47
YIFLYG++YL
Sbjct: 619829 YIFLYGRVYL 619800
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 146 bits (314), Expect = 8e-034
Identities = 60/111 (54%), Positives = 78/111 (70%)
Frame = +3 / -2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ +I +A + +Q + Q+G+ A+PM + LE G
Sbjct: 3913479 YVFLYGRLYLALSGLELAIMKQARMRGNTALQAAMGSQSIVQLGLLMALPMFMEIGLERG 3913300
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+A FI MQ Q+CSVFFTFSLGT++HYFGR ILHGGAKY+ATGRGFVV
Sbjct: 3913299 FRSALGDFIIMQLQLCSVFFTFSLGTKSHYFGRTILHGGAKYKATGRGFVV 3913147
Score = 135 bits (290), Expect = 2e-030
Identities = 54/111 (48%), Positives = 73/111 (65%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +++ ++ Q+G A+PM++ LE G
Sbjct: 29550193 YVFLYGRLYLVLSGLDQALATGKKFVHNAPLQVALASESFVQLGFLMALPMMMEIGLERG 29550014
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
TA F+ MQ Q+ SVFFTFSLGT+THY+GR +LHGGA+YRATGRGFVV
Sbjct: 29550013 FRTALSDFVLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVV 29549861
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 146 bits (314), Expect = 8e-034
Identities = 60/111 (54%), Positives = 78/111 (70%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YLALSG+ +I +A + +Q + Q+G+ A+PM + LE G
Sbjct: 4080900 YVFLYGRLYLALSGLELAIMKQARMRGNTALQAAMGSQSIVQLGLLMALPMFMEIGLERG 4080721
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
+A FI MQ Q+CSVFFTFSLGT++HYFGR ILHGGAKY+ATGRGFVV
Sbjct: 4080720 FRSALGDFIIMQLQLCSVFFTFSLGTKSHYFGRTILHGGAKYKATGRGFVV 4080568
Score = 135 bits (290), Expect = 2e-030
Identities = 54/111 (48%), Positives = 73/111 (65%)
Frame = +3 / -2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +++ ++ Q+G A+PM++ LE G
Sbjct: 30519437 YVFLYGRLYLVLSGLDQALATGKKFVHNAPLQVALASESFVQLGFLMALPMMMEIGLERG 30519258
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
TA F+ MQ Q+ SVFFTFSLGT+THY+GR +LHGGA+YRATGRGFVV
Sbjct: 30519257 FRTALSDFVLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVV 30519105
>dbj|AK099782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095O05, full
insert sequence
Length = 5774
Score = 145 bits (311), Expect = 2e-033
Identities = 60/111 (54%), Positives = 76/111 (68%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G+FTA+PMI+ LE G
Sbjct: 4258 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQG 4437
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 4438 FLPAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 4590
>dbj|AK120195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036H01, full
insert sequence
Length = 5949
Score = 145 bits (311), Expect = 2e-033
Identities = 60/111 (54%), Positives = 76/111 (68%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G+FTA+PMI+ LE G
Sbjct: 4162 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQG 4341
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 4342 FLPAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 4494
>dbj|AK120402.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088I17, full
insert sequence
Length = 5396
Score = 145 bits (311), Expect = 2e-033
Identities = 60/111 (54%), Positives = 76/111 (68%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G+FTA+PMI+ LE G
Sbjct: 3847 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQG 4026
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 4027 FLPAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 4179
>gb|AACV01002367.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002367, whole
genome shotgun sequence
Length = 23038
Score = 145 bits (311), Expect = 2e-033
Identities = 60/111 (54%), Positives = 76/111 (68%)
Frame = +3 / +3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G+FTA+PMI+ LE G
Sbjct: 12099 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQG 12278
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 12279 FLPAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 12431
>ref|NM_191270.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 5373
Score = 145 bits (311), Expect = 2e-033
Identities = 60/111 (54%), Positives = 76/111 (68%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G+FTA+PMI+ LE G
Sbjct: 4123 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQG 4302
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 4303 FLPAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 4455
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0435B05
Length = 150997
Score = 145 bits (311), Expect = 2e-033
Identities = 60/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G+FTA+PMI+ LE G
Sbjct: 150297 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQG 150118
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 150117 FLPAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 149965
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0503C12
Length = 147180
Score = 145 bits (311), Expect = 2e-033
Identities = 60/111 (54%), Positives = 76/111 (68%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y F++G++YLALSG+ IQ A+ QF+ Q+G+FTA+PMI+ LE G
Sbjct: 51006 YTFVWGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQG 50827
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
L A F TMQ SVF+TFS+GT++HY+GR ILHGGAKYRATGRGFVV
Sbjct: 50826 FLPAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVV 50674
>dbj|AK064446.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-F01, full
insert sequence
Length = 1923
Score = 140 bits (300), Expect = 7e-032
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +3 / +2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +SI I TQ +FQ+G+ +PM++ LE G
Sbjct: 329 YVFLYGRLYLVLSGLEKSILQDPQIKNIKPFENALATQSIFQLGMLLVLPMMIEVGLEKG 508
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
A +F+ MQ Q+ SVFFTF LGT+THY+GR ILHGGAKYR TGRGFVV
Sbjct: 509 FGRALGEFVIMQLQLASVFFTFHLGTKTHYYGRTILHGGAKYRGTGRGFVV 661
>gb|AACV01001413.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001413, whole
genome shotgun sequence
Length = 32302
Score = 140 bits (300), Expect = 7e-032
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +SI I TQ +FQ+G+ +PM++ LE G
Sbjct: 8336 YVFLYGRLYLVLSGLEKSILQDPQIKNIKPFENALATQSIFQLGMLLVLPMMIEVGLEKG 8157
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
A +F+ MQ Q+ SVFFTF LGT+THY+GR ILHGGAKYR TGRGFVV
Sbjct: 8156 FGRALGEFVIMQLQLASVFFTFHLGTKTHYYGRTILHGGAKYRGTGRGFVV 8004
>ref|NM_193211.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 5634
Score = 140 bits (300), Expect = 7e-032
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +3 / +1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +SI I TQ +FQ+G+ +PM++ LE G
Sbjct: 4378 YVFLYGRLYLVLSGLEKSILQDPQIKNIKPFENALATQSIFQLGMLLVLPMMIEVGLEKG 4557
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
A +F+ MQ Q+ SVFFTF LGT+THY+GR ILHGGAKYR TGRGFVV
Sbjct: 4558 FGRALGEFVIMQLQLASVFFTFHLGTKTHYYGRTILHGGAKYRGTGRGFVV 4710
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 140 bits (300), Expect = 7e-032
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +3 / -2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +SI I TQ +FQ+G+ +PM++ LE G
Sbjct: 2298320 YVFLYGRLYLVLSGLEKSILQDPQIKNIKPFENALATQSIFQLGMLLVLPMMIEVGLEKG 2298141
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
A +F+ MQ Q+ SVFFTF LGT+THY+GR ILHGGAKYR TGRGFVV
Sbjct: 2298140 FGRALGEFVIMQLQLASVFFTFHLGTKTHYYGRTILHGGAKYRGTGRGFVV 2297988
Score = 115 bits (245), Expect(2) = 1e-028
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +3 / -3
Query: 126 TQFLFQIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAIL 305
+Q FQ+G+ +PM++ LE G TA +F+ MQ Q+ SVFFTF LGT+THY+GR IL
Sbjct: 2253127 SQSFFQLGLLLVLPMVMEVGLEKGFRTALGEFVIMQLQLASVFFTFQLGTKTHYYGRTIL 2252948
Query: 306 HGGAKYRATGRGFVV 350
HGGAKYR TGRGFVV
Sbjct: 2252947 HGGAKYRPTGRGFVV 2252903
Score = 33.6 bits (67), Expect(2) = 1e-028
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESI 74
Y+FLYG++YL +SG+ SI
Sbjct: 2253238 YVFLYGRLYLVMSGLERSI 2253182
>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OJ1619_F12
Length = 133028
Score = 140 bits (300), Expect = 7e-032
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +SI I TQ +FQ+G+ +PM++ LE G
Sbjct: 120992 YVFLYGRLYLVLSGLEKSILQDPQIKNIKPFENALATQSIFQLGMLLVLPMMIEVGLEKG 120813
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
A +F+ MQ Q+ SVFFTF LGT+THY+GR ILHGGAKYR TGRGFVV
Sbjct: 120812 FGRALGEFVIMQLQLASVFFTFHLGTKTHYYGRTILHGGAKYRGTGRGFVV 120660
Score = 115 bits (245), Expect(2) = 2e-028
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +3 / -2
Query: 126 TQFLFQIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAIL 305
+Q FQ+G+ +PM++ LE G TA +F+ MQ Q+ SVFFTF LGT+THY+GR IL
Sbjct: 75799 SQSFFQLGLLLVLPMVMEVGLEKGFRTALGEFVIMQLQLASVFFTFQLGTKTHYYGRTIL 75620
Query: 306 HGGAKYRATGRGFVV 350
HGGAKYR TGRGFVV
Sbjct: 75619 HGGAKYRPTGRGFVV 75575
Score = 33.6 bits (67), Expect(2) = 2e-028
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3 / -2
Query: 18 YIFLYGKMYLALSGVGESI 74
Y+FLYG++YL +SG+ SI
Sbjct: 75910 YVFLYGRLYLVMSGLERSI 75854
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OJ1029_F04
Length = 141834
Score = 140 bits (300), Expect = 7e-032
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +SI I TQ +FQ+G+ +PM++ LE G
Sbjct: 29376 YVFLYGRLYLVLSGLEKSILQDPQIKNIKPFENALATQSIFQLGMLLVLPMMIEVGLEKG 29197
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
A +F+ MQ Q+ SVFFTF LGT+THY+GR ILHGGAKYR TGRGFVV
Sbjct: 29196 FGRALGEFVIMQLQLASVFFTFHLGTKTHYYGRTILHGGAKYRGTGRGFVV 29044
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003 genomic
scaffold, whole genome shotgun sequence
Length = 8539496
Score = 140 bits (300), Expect = 7e-032
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +SI I TQ +FQ+G+ +PM++ LE G
Sbjct: 2431751 YVFLYGRLYLVLSGLEKSILQDPQIKNIKPFENALATQSIFQLGMLLVLPMMIEVGLEKG 2431572
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
A +F+ MQ Q+ SVFFTF LGT+THY+GR ILHGGAKYR TGRGFVV
Sbjct: 2431571 FGRALGEFVIMQLQLASVFFTFHLGTKTHYYGRTILHGGAKYRGTGRGFVV 2431419
Score = 115 bits (245), Expect(2) = 1e-028
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +3 / -1
Query: 126 TQFLFQIGVFTAVPMILGFILESGVLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAIL 305
+Q FQ+G+ +PM++ LE G TA +F+ MQ Q+ SVFFTF LGT+THY+GR IL
Sbjct: 2386013 SQSFFQLGLLLVLPMVMEVGLEKGFRTALGEFVIMQLQLASVFFTFQLGTKTHYYGRTIL 2385834
Query: 306 HGGAKYRATGRGFVV 350
HGGAKYR TGRGFVV
Sbjct: 2385833 HGGAKYRPTGRGFVV 2385789
Score = 33.6 bits (67), Expect(2) = 1e-028
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESI 74
Y+FLYG++YL +SG+ SI
Sbjct: 2386124 YVFLYGRLYLVMSGLERSI 2386068
>ref|NT_107235.1| Oryza sativa (japonica cultivar-group)
Length = 369247
Score = 135 bits (290), Expect = 2e-030
Identities = 54/111 (48%), Positives = 73/111 (65%)
Frame = +3 / -2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +++ ++ Q+G A+PM++ LE G
Sbjct: 156798 YVFLYGRLYLVLSGLDQALATGKKFVHNAPLQVALASESFVQLGFLMALPMMMEIGLERG 156619
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
TA F+ MQ Q+ SVFFTFSLGT+THY+GR +LHGGA+YRATGRGFVV
Sbjct: 156618 FRTALSDFVLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVV 156466
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0017G10
Length = 166700
Score = 135 bits (290), Expect = 2e-030
Identities = 54/111 (48%), Positives = 73/111 (65%)
Frame = +3 / -3
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +++ ++ Q+G A+PM++ LE G
Sbjct: 156798 YVFLYGRLYLVLSGLDQALATGKKFVHNAPLQVALASESFVQLGFLMALPMMMEIGLERG 156619
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
TA F+ MQ Q+ SVFFTFSLGT+THY+GR +LHGGA+YRATGRGFVV
Sbjct: 156618 FRTALSDFVLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVV 156466
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0069C14
Length = 150579
Score = 135 bits (290), Expect = 2e-030
Identities = 54/111 (48%), Positives = 73/111 (65%)
Frame = +3 / -1
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +++ ++ Q+G A+PM++ LE G
Sbjct: 18000 YVFLYGRLYLVLSGLDQALATGKKFVHNAPLQVALASESFVQLGFLMALPMMMEIGLERG 17821
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
TA F+ MQ Q+ SVFFTFSLGT+THY+GR +LHGGA+YRATGRGFVV
Sbjct: 17820 FRTALSDFVLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVV 17668
>gb|AACV01014975.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014975, whole
genome shotgun sequence
Length = 9397
Score = 135 bits (290), Expect = 2e-030
Identities = 54/111 (48%), Positives = 73/111 (65%)
Frame = +3 / +2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +++ ++ Q+G A+PM++ LE G
Sbjct: 3719 YVFLYGRLYLVLSGLDQALATGKKFVHNAPLQVALASESFVQLGFLMALPMMMEIGLERG 3898
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
TA F+ MQ Q+ SVFFTFSLGT+THY+GR +LHGGA+YRATGRGFVV
Sbjct: 3899 FRTALSDFVLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVV 4051
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 135 bits (290), Expect = 2e-030
Identities = 54/111 (48%), Positives = 73/111 (65%)
Frame = +3 / -2
Query: 18 YIFLYGKMYLALSGVGESIQNRADIXXXXXXXXXXXTQFLFQIGVFTAVPMILGFILESG 197
Y+FLYG++YL LSG+ +++ ++ Q+G A+PM++ LE G
Sbjct: 11851456 YVFLYGRLYLVLSGLDQALATGKKFVHNAPLQVALASESFVQLGFLMALPMMMEIGLERG 11851277
Query: 198 VLTAFVQFITMQFQMCSVFFTFSLGTRTHYFGRAILHGGAKYRATGRGFVV 350
TA F+ MQ Q+ SVFFTFSLGT+THY+GR +LHGGA+YRATGRGFVV
Sbjct: 11851276 FRTALSDFVLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVV 11851124
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,837,034,005
Number of Sequences: 438736
Number of extensions: 43748951
Number of successful extensions: 284696
Number of sequences better than 1.0e-020: 113
length of database: 933,473,305
effective HSP length: 56
effective length of database: 908,904,089
effective search space used: 59987669874
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)