TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= L46398.2.1
(1263 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|U78782.1|OSU78782 Oryza sativa MADS box protein (OsMADS6... 207 3e-094
dbj|AK069103.1| Oryza sativa (japonica cultivar-group) cDNA... 207 4e-094
gb|AY551918.1| Oryza sativa (japonica cultivar-group) MADS-... 176 1e-090
dbj|AK070540.1| Oryza sativa (japonica cultivar-group) cDNA... 176 1e-090
ref|XM_473638.1| Oryza sativa (japonica cultivar-group), p... 176 1e-090
gb|BP185086.1|BP185086 BP185086 pNS rice panicle cDNA, flow... 204 6e-079
dbj|AP004178.3| Oryza sativa (japonica cultivar-group) geno... 139 1e-072
gb|AACV01010373.1| Oryza sativa (japonica cultivar-group) c... 139 1e-059
dbj|AK072867.1| Oryza sativa (japonica cultivar-group) cDNA... 138 1e-059
gb|U78892.1|OSU78892 Oryza sativa MADS box protein (OsMADS8... 138 1e-059
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 139 2e-059
dbj|AK070981.1| Oryza sativa (japonica cultivar-group) cDNA... 125 2e-058
dbj|AK069728.1| Oryza sativa (japonica cultivar-group) cDNA... 125 2e-058
gb|CF332154.1|CF332154 NACL--08-I21.g1 Rice callus plasmid ... 125 8e-058
gb|AY551917.1| Oryza sativa (japonica cultivar-group) MADS-... 122 8e-055
gb|U78890.1|OSU78890 Oryza sativa MADS box protein (OsMADS5... 123 8e-055
dbj|AK064184.1| Oryza sativa (japonica cultivar-group) cDNA... 123 8e-055
ref|NM_185637.2| Oryza sativa (japonica cultivar-group), mRNA 123 8e-055
dbj|AB003324.1| Oryza sativa (japonica cultivar-group) mRNA... 122 1e-054
gb|AY551922.1| Oryza sativa (japonica cultivar-group) MADS-... 122 1e-054
ref|XM_469790.1| Oryza sativa (japonica cultivar-group), mRNA 122 1e-054
dbj|AK100227.1| Oryza sativa (japonica cultivar-group) cDNA... 120 3e-054
dbj|AK100263.1| Oryza sativa (japonica cultivar-group) cDNA... 133 6e-054
ref|XM_483487.1| Oryza sativa (japonica cultivar-group), mRNA 133 6e-054
gb|U78891.2|OSU78891 Oryza sativa MADS box protein (MADS7) ... 133 6e-054
emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromoso... 139 2e-053
gb|AY551926.1| Oryza sativa (japonica cultivar-group) MADS-... 116 3e-053
gb|AY332477.1| Oryza sativa (japonica cultivar-group) MADS ... 131 9e-053
emb|Y15008.1|OSY15008 Oryza sativa mRNA for M79 protein 127 6e-052
gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS ... 116 5e-051
gb|AY551921.1| Oryza sativa (japonica cultivar-group) MADS-... 133 1e-050
gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-... 116 2e-050
ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA 116 2e-050
dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA... 116 3e-050
dbj|AB003325.1| Oryza sativa (japonica cultivar-group) mRNA... 118 9e-050
gb|AY551920.1| Oryza sativa (japonica cultivar-group) MADS-... 118 9e-050
ref|XM_476392.1| Oryza sativa (japonica cultivar-group), mRNA 118 9e-050
ref|XM_479092.1| Oryza sativa (japonica cultivar-group), mRNA 118 1e-048
emb|AJ011675.1|OSA011675 Oryza sativa mRNA for MADS-box pro... 118 1e-048
dbj|AK064704.1| Oryza sativa (japonica cultivar-group) cDNA... 118 2e-048
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 139 1e-047
gb|AACV01005163.1| Oryza sativa (japonica cultivar-group) c... 81 5e-047
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 139 5e-046
dbj|AK072683.1| Oryza sativa (japonica cultivar-group) cDNA... 118 1e-045
gb|AU225854.1|AU225854 AU225854 Oryza sativa Koshihikari pi... 106 1e-043
dbj|AK111723.1| Oryza sativa (japonica cultivar-group) cDNA... 181 1e-043
dbj|AB232157.1| Oryza sativa (japonica cultivar-group) mRNA... 181 1e-043
gb|CF315263.1|CF315263 HD--04-B23.b1 OsHDAC1-overexpressing... 118 5e-043
dbj|AK070425.1| Oryza sativa (japonica cultivar-group) cDNA... 118 2e-042
gb|AY332475.1| Oryza sativa (japonica cultivar-group) MADS ... 118 2e-042
gb|AY332476.1| Oryza sativa (japonica cultivar-group) MADS ... 129 6e-042
dbj|AK070958.1| Oryza sativa (japonica cultivar-group) cDNA... 121 2e-041
gb|AY551913.1| Oryza sativa (japonica cultivar-group) MADS-... 121 2e-041
dbj|AK067641.1| Oryza sativa (japonica cultivar-group) cDNA... 127 3e-041
dbj|AB003328.1| Oryza sativa (japonica cultivar-group) mRNA... 127 3e-041
dbj|AK104921.1| Oryza sativa (japonica cultivar-group) cDNA... 127 3e-041
ref|XM_463559.1| Oryza sativa (japonica cultivar-group), p... 119 5e-041
gb|AACV01006102.1| Oryza sativa (japonica cultivar-group) c... 125 5e-040
gb|AY551912.1| Oryza sativa (japonica cultivar-group) MADS-... 118 5e-040
gb|AY345220.1| Oryza sativa (japonica cultivar-group) trans... 109 4e-039
gb|CV720574.1|CV720574 YBH--01-B14.b1 Rice before heading y... 93 6e-039
gb|AY177696.1| Oryza sativa (japonica cultivar-group) trans... 106 8e-039
ref|XM_472756.1| Oryza sativa (japonica cultivar-group), p... 107 8e-039
gb|AC135158.2| Oryza sativa (japonica cultivar-group) chrom... 125 7e-038
gb|AACV01020364.1| Oryza sativa (japonica cultivar-group) c... 138 7e-038
gb|CV721367.1|CV721367 YBH--03-N20.b1 Rice before heading y... 89 1e-037
gb|AC105732.3| Oryza sativa (japonica cultivar-group) chrom... 125 2e-037
dbj|AK070135.1| Oryza sativa (japonica cultivar-group) cDNA... 116 2e-037
gb|AY551919.1| Oryza sativa (japonica cultivar-group) MADS-... 116 3e-037
ref|NM_197541.1| Oryza sativa (japonica cultivar-group) put... 116 3e-037
gb|CB659436.1|CB659436 OSJNEc16G22.f OSJNEc Oryza sativa (j... 116 3e-037
gb|AY177702.1| Oryza sativa (japonica cultivar-group) trans... 111 3e-037
ref|XM_467621.1| Oryza sativa (japonica cultivar-group), mRNA 111 3e-037
gb|CV734295.1|CV734295 FLO--09-J13.b1 Rice flower lambda ph... 160 3e-037
gb|AY224482.1| Oryza sativa (japonica cultivar-group) isola... 110 6e-037
gb|AY345224.1| Oryza sativa (japonica cultivar-group) trans... 116 9e-037
gb|CB658195.1|CB658195 OSJNEc14A21.f OSJNEc Oryza sativa (j... 116 1e-036
gb|AACV01018907.1| Oryza sativa (japonica cultivar-group) c... 133 2e-036
gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromo... 138 2e-036
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 125 2e-035
gb|AACV01013077.1| Oryza sativa (japonica cultivar-group) c... 123 3e-035
gb|C75937.1|C75937 C75937 Rice callus Oryza sativa (japonic... 126 1e-034
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 138 4e-034
dbj|AP005529.3| Oryza sativa (japonica cultivar-group) geno... 133 4e-034
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 125 7e-034
dbj|AK109522.1| Oryza sativa (japonica cultivar-group) cDNA... 104 9e-034
ref|XM_464283.1| Oryza sativa (japonica cultivar-group), mRNA 104 9e-034
gb|AY553724.1| Oryza sativa (japonica cultivar-group) MADS-... 147 2e-033
ref|NM_188300.1| Oryza sativa (japonica cultivar-group), p... 147 2e-033
dbj|AK108568.1| Oryza sativa (japonica cultivar-group) cDNA... 147 3e-033
dbj|AB026295.2| Oryza sativa (japonica cultivar-group) geno... 123 5e-033
gb|AY250075.1| Oryza sativa (japonica cultivar-group) MADS2... 100 6e-033
ref|XM_467915.1| Oryza sativa (japonica cultivar-group), mRNA 100 2e-032
dbj|AB107957.1| Oryza sativa (japonica cultivar-group) RMD1... 100 2e-032
dbj|AB003322.1| Oryza sativa (japonica cultivar-group) mRNA... 100 2e-032
gb|CB652556.1|CB652556 OSJNEc02K24.f OSJNEc Oryza sativa (j... 100 2e-032
gb|AY345222.1| Oryza sativa (japonica cultivar-group) trans... 144 2e-032
gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 ... 116 2e-032
dbj|AK070121.1| Oryza sativa (japonica cultivar-group) cDNA... 100 3e-032
dbj|AK111859.1| Oryza sativa (japonica cultivar-group) cDNA... 144 3e-032
ref|NT_107186.1| Oryza sativa (japonica cultivar-group) 116 4e-032
gb|AACV01007934.1| Oryza sativa (japonica cultivar-group) c... 116 5e-032
gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 gen... 116 2e-031
gb|AF377947.3| Oryza sativa (japonica cultivar-group) chrom... 116 3e-031
gb|AACV01015031.1| Oryza sativa (japonica cultivar-group) c... 118 3e-031
gb|AY345221.1| Oryza sativa (japonica cultivar-group) trans... 140 4e-031
emb|AJ536158.1|OSA536158 Oryza sativa (japonica cultivar-gr... 140 4e-031
gb|AACV01005162.1| Oryza sativa (japonica cultivar-group) c... 139 7e-031
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 139 7e-031
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 139 7e-031
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 139 7e-031
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 139 7e-031
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 139 7e-031
gb|AACV01016746.1| Oryza sativa (japonica cultivar-group) c... 118 8e-031
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 123 8e-031
gb|AY177698.1| Oryza sativa (japonica cultivar-group) trans... 108 9e-031
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 138 2e-030
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 138 2e-030
gb|D22380.1|D22380 RICC10934A Rice callus Oryza sativa (jap... 137 2e-030
dbj|AP003759.2| Oryza sativa (japonica cultivar-group) geno... 118 3e-030
dbj|AP004342.5| Oryza sativa (japonica cultivar-group) geno... 118 4e-030
gb|AACV01002820.1| Oryza sativa (japonica cultivar-group) c... 118 6e-030
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 123 6e-030
gb|AACV01024177.1| Oryza sativa (japonica cultivar-group) c... 118 7e-030
gb|AY177700.1| Oryza sativa (japonica cultivar-group) trans... 97 1e-029
dbj|AP005175.4| Oryza sativa (japonica cultivar-group) geno... 118 2e-029
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 116 2e-029
dbj|AP003379.2| Oryza sativa (japonica cultivar-group) geno... 118 3e-029
dbj|AP003346.4| Oryza sativa (japonica cultivar-group) geno... 118 3e-029
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 118 3e-029
emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC O... 118 3e-029
gb|CF322477.1|CF322477 HDN--01-C18.g1 OsHDAC1-overexpressin... 98 4e-029
emb|AL513004.1|CNS07EFJ Oryza sativa (japonica cultivar-gro... 118 4e-029
emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC O... 118 4e-029
gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJN... 118 4e-029
gb|AQ578837.1|AQ578837 nbxb0093F09f CUGI Rice BAC Library O... 133 4e-029
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 133 4e-029
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 133 4e-029
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 133 4e-029
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 133 4e-029
emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B... 118 5e-029
gb|CF297258.1|CF297258 30DGS--07-P17.b1 Rice leaf plasmid c... 127 5e-029
ref|NT_107159.1| Oryza sativa (japonica cultivar-group) 118 1e-028
gb|AY345223.2| Oryza sativa (japonica cultivar-group) trans... 95 2e-028
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 118 2e-028
gb|CB655394.1|CB655394 OSJNEc08M08.r OSJNEc Oryza sativa (j... 116 4e-028
gb|AU068508.1|AU068508 AU068508 Rice callus Oryza sativa (j... 119 5e-028
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 118 2e-027
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 118 2e-027
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 125 9e-027
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 125 9e-027
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 125 9e-027
gb|AACV01010477.1| Oryza sativa (japonica cultivar-group) c... 108 2e-026
dbj|AK070894.1| Oryza sativa (japonica cultivar-group) cDNA... 108 2e-026
gb|AU069848.1|AU069848 AU069848 Rice panicle at flowering s... 111 2e-026
gb|AU088583.1|AU088583 AU088583 Rice callus Oryza sativa (j... 111 2e-026
gb|AU094650.1|AU094650 AU094650 Rice panicle (longer than 1... 111 2e-026
gb|AQ330858.1|AQ330858 nbxb0048E10f CUGI Rice BAC Library O... 123 5e-026
gb|AU225127.1|AU225127 AU225127 Oryza sativa Koshihikari pi... 123 5e-026
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 123 5e-026
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 123 5e-026
gb|AQ271415.1|AQ271415 nbxb0025B08f CUGI Rice BAC Library O... 122 6e-026
gb|AQ575051.1|AQ575051 nbxb0086L17r CUGI Rice BAC Library O... 122 6e-026
gb|AACV01004772.1| Oryza sativa (japonica cultivar-group) c... 99 7e-026
gb|AY551924.1| Oryza sativa (japonica cultivar-group) MADS-... 105 1e-025
ref|XM_463532.1| Oryza sativa (japonica cultivar-group), p... 105 1e-025
emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromoso... 108 2e-025
gb|AACV01003159.1| Oryza sativa (japonica cultivar-group) c... 105 2e-025
gb|AACV01003433.1| Oryza sativa (japonica cultivar-group) c... 104 2e-025
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) geno... 99 2e-025
dbj|AP004766.1| Oryza sativa (japonica cultivar-group) chro... 99 3e-025
dbj|AP004049.2| Oryza sativa (japonica cultivar-group) geno... 105 3e-025
dbj|AP006720.1| Oryza sativa (japonica cultivar-group) geno... 105 3e-025
gb|D46933.1|D46933 RICS11905A Rice green shoot Oryza sativa... 120 3e-025
gb|AY177693.1| Oryza sativa (japonica cultivar-group) trans... 119 6e-025
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 108 1e-024
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 118 1e-024
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 118 1e-024
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 118 1e-024
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 118 1e-024
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 105 1e-024
gb|C74564.1|C74564 C74564 Rice panicle shorter than 3cm Ory... 118 2e-024
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 118 2e-024
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 118 2e-024
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 118 2e-024
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 118 2e-024
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 118 2e-024
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 118 2e-024
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 118 2e-024
dbj|AP004113.3| Oryza sativa (japonica cultivar-group) geno... 104 2e-024
dbj|AP004836.2| Oryza sativa (japonica cultivar-group) geno... 104 2e-024
gb|AACV01009916.1| Oryza sativa (japonica cultivar-group) c... 102 2e-024
gb|C72923.1|C72923 C72923 Rice panicle at flowering stage O... 117 2e-024
gb|AACV01000383.1| Oryza sativa (japonica cultivar-group) c... 117 3e-024
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 117 3e-024
dbj|AP003105.2| Oryza sativa (japonica cultivar-group) geno... 117 3e-024
dbj|AP003197.4| Oryza sativa (japonica cultivar-group) geno... 117 3e-024
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 117 3e-024
dbj|AK121171.1| Oryza sativa (japonica cultivar-group) cDNA... 116 4e-024
dbj|AK100233.1| Oryza sativa (japonica cultivar-group) cDNA... 102 4e-024
gb|AACV01022000.1| Oryza sativa (japonica cultivar-group) c... 116 6e-024
gb|CF332627.1|CF332627 JMT--01-D10.b1 AtJMT-overexpressing ... 116 7e-024
gb|CF334759.1|CF334759 JMT--04-C18.b1 AtJMT-overexpressing ... 116 7e-024
gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05... 116 7e-024
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 116 7e-024
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 116 7e-024
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 116 7e-024
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 116 7e-024
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 116 7e-024
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 104 8e-024
emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromoso... 102 1e-023
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 99 2e-023
emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromoso... 102 2e-023
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 105 2e-023
dbj|AP003405.1| Oryza sativa (japonica cultivar-group) chro... 108 3e-023
gb|AC098695.2| Oryza sativa (japonica cultivar-group) chrom... 113 4e-023
gb|AY551915.1| Oryza sativa (japonica cultivar-group) MADS-... 113 4e-023
gb|AACV01005781.1| Oryza sativa (japonica cultivar-group) c... 113 4e-023
ref|XM_468584.1| Oryza sativa (japonica cultivar-group), p... 113 4e-023
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 113 4e-023
gb|CB682181.1|CB682181 OSJNEf09D09.f OSJNEf Oryza sativa (j... 112 9e-023
dbj|AK102927.1| Oryza sativa (japonica cultivar-group) cDNA... 112 9e-023
gb|AY177695.2| Oryza sativa (japonica cultivar-group) trans... 112 9e-023
gb|AACV01002803.1| Oryza sativa (japonica cultivar-group) c... 108 1e-022
gb|CF294135.1|CF294135 30DGS--03-I23.g1 Rice leaf plasmid c... 111 1e-022
ref|XM_471721.1| Oryza sativa (japonica cultivar-group), p... 111 1e-022
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 102 3e-022
gb|CF309429.1|CF309429 ABF--03-J22.g1 ABF3-overexpressing t... 110 3e-022
ref|XM_482530.1| Oryza sativa (japonica cultivar-group), mRNA 110 3e-022
gb|CV731070.1|CV731070 FLO--04-O21.g1 Rice flower lambda ph... 109 6e-022
dbj|AB003327.1| Oryza sativa (japonica cultivar-group) mRNA... 109 6e-022
gb|AY177694.1| Oryza sativa (japonica cultivar-group) trans... 109 6e-022
dbj|AK066160.1| Oryza sativa (japonica cultivar-group) cDNA... 109 6e-022
gb|AC135920.2| Oryza sativa (japonica cultivar-group) chrom... 109 6e-022
gb|AACV01011127.1| Oryza sativa (japonica cultivar-group) c... 109 6e-022
ref|NT_107224.1| Oryza sativa (japonica cultivar-group) 109 6e-022
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 109 6e-022
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 109 6e-022
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 109 6e-022
gb|AC090974.1|AC090974 Oryza sativa (japonica cultivar-grou... 108 7e-022
dbj|AP003561.2| Oryza sativa (japonica cultivar-group) geno... 108 9e-022
gb|CF336890.1|CF336890 JMT--07-B20.b1 AtJMT-overexpressing ... 108 1e-021
gb|D15657.2|D15657 RICC1032A Rice callus Oryza sativa (japo... 107 3e-021
gb|AY551923.1| Oryza sativa (japonica cultivar-group) MADS-... 106 6e-021
>gb|U78782.1|OSU78782 Oryza sativa MADS box protein (OsMADS6) mRNA, complete cds
Length = 1043
Score = 207 bits (447), Expect(3) = 1e-062
Identities = 89/116 (76%), Positives = 97/116 (83%)
Frame = +1 / +1
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C +N+ALSE+QSWY EMSKL+AKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE
Sbjct: 247 CCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 426
Query: 598 CALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSNYTTLQHAACW 765
CALSQARQRKTQ+MMEQVEELRR ER LGE+NRQLKHKLE EG ++ A W
Sbjct: 427 CALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYRAMQQASW 594
Score = 192 bits (413), Expect(3) = 3e-094
Identities = 79/82 (96%), Positives = 81/82 (98%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSA
Sbjct: 34 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 213
Query: 382 GVTKTLERYQHCCYNAQDSNNS 447
G+TKTLERYQHCCYNAQDSNN+
Sbjct: 214 GITKTLERYQHCCYNAQDSNNA 279
Score = 131 bits (280), Expect(4) = 1e-076
Identities = 58/101 (57%), Positives = 64/101 (63%)
Frame = -2 / -1
Query: 764 QQAACCKVV*LLQPSASSLCLSCLFXXXXXXXXXXXXXXXXXITCVFLCLACDKAHXXXX 585
Q+A C + L++PS SSLCLSCL I+CVFLCLACD AH
Sbjct: 593 QEACCMAL*LLVEPSTSSLCLSCLLISPS*RSFLRSSSTCSIISCVFLCLACDSAHSSCF 414
Query: 584 XXXXXXFTLSGPRSSPSKCL*VRCKASNFALSFDISWYQL* 462
TLSGPRSSPSKCL*VRCKASNFA +FDISWYQL*
Sbjct: 413 SSCCNSLTLSGPRSSPSKCL*VRCKASNFAFNFDISWYQL* 291
Score = 126 bits (269), Expect(3) = 3e-094
Identities = 64/108 (59%), Positives = 70/108 (64%)
Frame = +3 / +3
Query: 441 Q*CTL*ISELVPGNVKTEGKIRGLAAHSEALAWRGPWATECEGIAAARETARMCFVTGKT 620
Q CT * SELVP NVK E KI AAHS+ALAW G W T+ + IAAA ETA MC +TG+T
Sbjct: 270 QQCTF*NSELVP*NVKVESKI*SFAAHSKALAWGGSWTTQRQRIAAAGETA*MCTITGET 449
Query: 621 EKDASYDGASGRASQNGASPGRNEQATQTQARS*RL*QLHNLAACRLL 764
EKDA+ DG G SQ GAS G N ATQ QAR *R Q A LL
Sbjct: 450 EKDATDDGTGGGTSQKGASAG*N**ATQAQARG*RFHQQLQSHAASLL 593
Score = 117 bits (250), Expect(4) = 8e-063
Identities = 59/95 (62%), Positives = 66/95 (69%)
Frame = -3 / -2
Query: 730 YSLQLRACV*VACSFLPGDAPFCEALPLAPS*LASFSVLPVTKHILAVSLAAAIPSHSVA 551
++LQ RAC *VA F P DAPFCE P PS +ASFSV PV HI AVS AAAI V
Sbjct: 559 WNLQPRACA*VAY*FHPADAPFCEVPPPVPSSVASFSVSPVIVHIQAVSPAAAIL*R*VV 380
Query: 550 QGPRQASASECAARPRILPSVLTFPGTSSEIQRVH 446
Q P QASA ECAA+ +IL S LTF GT+SE Q+VH
Sbjct: 379 QDPPQASAFECAAKLQILLSTLTFHGTNSEFQKVH 275
Score = 116 bits (249), Expect(4) = 8e-063
Identities = 54/81 (66%), Positives = 60/81 (74%)
Frame = -1 / -3
Query: 444 IVGILSIVAAMLIPF*SFSYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALG 265
IVGILSIVA ML+PF*S Y ERDLGVAE+G+LVGLLE+AVAALG
Sbjct: 276 IVGILSIVATMLVPF*SLCYAGAAELVELAAAGEDDERDLGVAENGQLVGLLEEAVAALG 97
Query: 264 EGDLAVDLVLDPLQLDASPPH 202
EGDL VDLVLD LQL++SPPH
Sbjct: 96 EGDLPVDLVLDALQLNSSPPH 34
Score = 105 bits (223), Expect(4) = 1e-076
Identities = 50/73 (68%), Positives = 52/73 (71%)
Frame = -2 / -1
Query: 419 QQC*YLSKVLVTPALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLIL 240
QQC YLSKV V PALPNS*SLPR EKMM AFL RPLRRLEKVT LIL
Sbjct: 251 QQCWYLSKVFVMPALPNS*SLPRLEKMMSATSASQRTDSS*AFLRRPLRRLEKVTCLLIL 72
Query: 239 FSIRFSSTRPLPM 201
FS+RFSST PLP+
Sbjct: 71 FSMRFSSTLPLPI 33
Score = 72.1 bits (151), Expect(3) = 3e-094
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = +1 / +1
Query: 814 VHPPAHSVAMDCEPTLQIGYPHHQFPPPEAVNNIPRSAATGENNFMLGWVL* 969
V PP HS AMD EPTLQIGYPH P + A ENNFMLGWVL*
Sbjct: 631 VQPPPHSAAMDSEPTLQIGYPHQFVPAEANTIQRSTAPAGAENNFMLGWVL* 786
Score = 71.6 bits (150), Expect(4) = 3e-028
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = +2 / +2
Query: 608 HRQDRERRKL*WSKWKSFAERSVTWEK*TGNSNTSSKLKAVATTQPCSMPPAG 766
HR+DRERR *W++W++FAERSV+W K GNS+TSS+LK T P G
Sbjct: 437 HRRDRERRN**WNRWRNFAERSVSWVKLIGNSSTSSRLKVPPATTEPCSKPPG 595
Score = 70.3 bits (147), Expect(4) = 1e-076
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -2 / -1
Query: 968 QRTHPSMKLFSPVAALLGILLTASGGGNW**GYPICRVGSQSIATEWAGGCT 813
QRTHPSMKLFS A + + + + G **GYPIC+VGS+S+A E GGCT
Sbjct: 785 QRTHPSMKLFSAPAGAVLL*IVFASAGTN**GYPICKVGSESMAAECGGGCT 630
Score = 57.4 bits (119), Expect(4) = 3e-028
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +2 / +2
Query: 446 VHSLNLRAGTRKCQN*GQNSRPCSALRGTCLARTLGH 556
+H L LR GT KCQ+* QN + CSAL+GTCL R L H
Sbjct: 275 MHFLKLRVGTMKCQS*KQNLKLCSALKGTCLGRILDH 385
Score = 48.7 bits (100), Expect(3) = 1e-062
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3 / +3
Query: 222 AEADREQDQPPGHLLQAPQRPAQE 293
AEA REQDQ GHLLQAPQRP QE
Sbjct: 54 AEAHREQDQQAGHLLQAPQRPPQE 125
Score = 43.2 bits (88), Expect(4) = 1e-076
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3 / -2
Query: 445 YCWNLEHCSSNVDTFLK 395
+CWNLEHCS+NV TFLK
Sbjct: 277 HCWNLEHCSNNVGTFLK 227
Score = 39.6 bits (80), Expect(4) = 8e-063
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1 / -3
Query: 891 RKLVMRVPDLQSGFTVHSN*VGRRMHLIG 805
R +MR+P+LQ GF VH V RR+H+ G
Sbjct: 708 RHKLMRIPNLQGGFRVHGRGVWRRLHVCG 622
Score = 34.1 bits (68), Expect(3) = 1e-062
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 938 RTTSCWDGFFE 970
RTTSCWDGFFE
Sbjct: 755 RTTSCWDGFFE 787
Score = 33.6 bits (67), Expect(4) = 3e-028
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2 / +2
Query: 392 KL*KGINIAATMLKIPTI 445
+L*KG NI ATMLKIPT+
Sbjct: 224 RL*KGTNIVATMLKIPTM 277
Score = 30.4 bits (60), Expect(4) = 3e-028
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 936 REQLHAGMGSLS 971
REQLHAGMGSLS
Sbjct: 753 REQLHAGMGSLS 788
Score = 29.0 bits (57), Expect(4) = 8e-063
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 972 NSKNPSQHEVVL 937
+SKNPSQHEVVL
Sbjct: 789 SSKNPSQHEVVL 754
>dbj|AK069103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006N09, full
insert sequence
Length = 1134
Score = 207 bits (447), Expect(3) = 1e-062
Identities = 89/116 (76%), Positives = 97/116 (83%)
Frame = +1 / +2
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C +N+ALSE+QSWY EMSKL+AKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE
Sbjct: 347 CCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 526
Query: 598 CALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSNYTTLQHAACW 765
CALSQARQRKTQ+MMEQVEELRR ER LGE+NRQLKHKLE EG ++ A W
Sbjct: 527 CALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYRAMQQASW 694
Score = 192 bits (413), Expect(3) = 4e-094
Identities = 79/82 (96%), Positives = 81/82 (98%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSA
Sbjct: 134 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 313
Query: 382 GVTKTLERYQHCCYNAQDSNNS 447
G+TKTLERYQHCCYNAQDSNN+
Sbjct: 314 GITKTLERYQHCCYNAQDSNNA 379
Score = 130 bits (279), Expect(4) = 2e-076
Identities = 57/100 (57%), Positives = 63/100 (63%)
Frame = -2 / -1
Query: 764 QQAACCKVV*LLQPSASSLCLSCLFXXXXXXXXXXXXXXXXXITCVFLCLACDKAHXXXX 585
Q+A C + L++PS SSLCLSCL I+CVFLCLACD AH
Sbjct: 693 QEACCMAL*LLVEPSTSSLCLSCLLISPS*RSFLRSSSTCSIISCVFLCLACDSAHSSCF 514
Query: 584 XXXXXXFTLSGPRSSPSKCL*VRCKASNFALSFDISWYQL 465
TLSGPRSSPSKCL*VRCKASNFA +FDISWYQL
Sbjct: 513 SSCCNSLTLSGPRSSPSKCL*VRCKASNFAFNFDISWYQL 394
Score = 125 bits (268), Expect(3) = 4e-094
Identities = 64/108 (59%), Positives = 70/108 (64%)
Frame = +3 / +1
Query: 441 Q*CTL*ISELVPGNVKTEGKIRGLAAHSEALAWRGPWATECEGIAAARETARMCFVTGKT 620
Q CT * ELVP NVK E KI AAHS+ALAW G W T+ + IAAA ETA MC +TG+T
Sbjct: 370 QQCTF*NPELVP*NVKVESKI*SFAAHSKALAWGGSWTTQRQRIAAAGETA*MCTITGET 549
Query: 621 EKDASYDGASGRASQNGASPGRNEQATQTQARS*RL*QLHNLAACRLL 764
EKDA+ DG SG SQ GAS G N ATQ QAR *R Q A LL
Sbjct: 550 EKDATDDGTSGGTSQKGASAG*N**ATQAQARG*RFHQQLQSHAASLL 693
Score = 117 bits (250), Expect(4) = 8e-063
Identities = 59/95 (62%), Positives = 66/95 (69%)
Frame = -3 / -2
Query: 730 YSLQLRACV*VACSFLPGDAPFCEALPLAPS*LASFSVLPVTKHILAVSLAAAIPSHSVA 551
++LQ RAC *VA F P DAPFCE PL PS +ASFSV PV HI AVS AAAI V
Sbjct: 659 WNLQPRACA*VAY*FHPADAPFCEVPPLVPSSVASFSVSPVIVHIQAVSPAAAIL*R*VV 480
Query: 550 QGPRQASASECAARPRILPSVLTFPGTSSEIQRVH 446
Q P QASA ECAA+ +IL S LTF GT+S Q+VH
Sbjct: 479 QDPPQASAFECAAKLQILLSTLTFHGTNSGFQKVH 375
Score = 116 bits (249), Expect(4) = 8e-063
Identities = 54/81 (66%), Positives = 60/81 (74%)
Frame = -1 / -3
Query: 444 IVGILSIVAAMLIPF*SFSYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALG 265
IVGILSIVA ML+PF*S Y ERDLGVAE+G+LVGLLE+AVAALG
Sbjct: 376 IVGILSIVATMLVPF*SLCYAGAAELVELAAAGEDDERDLGVAENGQLVGLLEEAVAALG 197
Query: 264 EGDLAVDLVLDPLQLDASPPH 202
EGDL VDLVLD LQL++SPPH
Sbjct: 196 EGDLPVDLVLDALQLNSSPPH 134
Score = 105 bits (223), Expect(4) = 2e-076
Identities = 50/73 (68%), Positives = 52/73 (71%)
Frame = -2 / -1
Query: 419 QQC*YLSKVLVTPALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLIL 240
QQC YLSKV V PALPNS*SLPR EKMM AFL RPLRRLEKVT LIL
Sbjct: 351 QQCWYLSKVFVMPALPNS*SLPRLEKMMSATSASQRTDSS*AFLRRPLRRLEKVTCLLIL 172
Query: 239 FSIRFSSTRPLPM 201
FS+RFSST PLP+
Sbjct: 171 FSMRFSSTLPLPI 133
Score = 73.0 bits (153), Expect(4) = 1e-027
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +2 / +3
Query: 608 HRQDRERRKL*WSKWKSFAERSVTWEK*TGNSNTSSKLKAVATTQPCSMPPAG 766
HR+DRERR *W+KW++FAERSV+W K GNS+TSS+LK T P G
Sbjct: 537 HRRDRERRN**WNKWRNFAERSVSWVKLIGNSSTSSRLKVPPATTEPCSKPPG 695
Score = 72.1 bits (151), Expect(3) = 4e-094
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = +1 / +2
Query: 814 VHPPAHSVAMDCEPTLQIGYPHHQFPPPEAVNNIPRSAATGENNFMLGWVL* 969
V PP HS AMD EPTLQIGYPH P + A ENNFMLGWVL*
Sbjct: 731 VQPPPHSAAMDSEPTLQIGYPHQFVPAEANTIQRSTAPAGAENNFMLGWVL* 886
Score = 70.3 bits (147), Expect(4) = 2e-076
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -2 / -1
Query: 968 QRTHPSMKLFSPVAALLGILLTASGGGNW**GYPICRVGSQSIATEWAGGCT 813
QRTHPSMKLFS A + + + + G **GYPIC+VGS+S+A E GGCT
Sbjct: 885 QRTHPSMKLFSAPAGAVLL*IVFASAGTN**GYPICKVGSESMAAECGGGCT 730
Score = 54.2 bits (112), Expect(4) = 1e-027
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 446 VHSLNLRAGTRKCQN*GQNSRPCSALRGTCLARTLGH 556
+H L R GT KCQ+* QN + CSAL+GTCL R L H
Sbjct: 375 MHFLKPRVGTMKCQS*KQNLKLCSALKGTCLGRILDH 485
Score = 48.7 bits (100), Expect(3) = 1e-062
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3 / +1
Query: 222 AEADREQDQPPGHLLQAPQRPAQE 293
AEA REQDQ GHLLQAPQRP QE
Sbjct: 154 AEAHREQDQQAGHLLQAPQRPPQE 225
Score = 43.2 bits (88), Expect(4) = 2e-076
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3 / -2
Query: 445 YCWNLEHCSSNVDTFLK 395
+CWNLEHCS+NV TFLK
Sbjct: 377 HCWNLEHCSNNVGTFLK 327
Score = 39.6 bits (80), Expect(4) = 8e-063
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1 / -3
Query: 891 RKLVMRVPDLQSGFTVHSN*VGRRMHLIG 805
R +MR+P+LQ GF VH V RR+H+ G
Sbjct: 808 RHKLMRIPNLQGGFRVHGRGVWRRLHVCG 722
Score = 34.1 bits (68), Expect(3) = 1e-062
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / +3
Query: 938 RTTSCWDGFFE 970
RTTSCWDGFFE
Sbjct: 855 RTTSCWDGFFE 887
Score = 33.6 bits (67), Expect(4) = 1e-027
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 392 KL*KGINIAATMLKIPTI 445
+L*KG NI ATMLKIPT+
Sbjct: 324 RL*KGTNIVATMLKIPTM 377
Score = 30.4 bits (60), Expect(4) = 1e-027
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +1
Query: 936 REQLHAGMGSLS 971
REQLHAGMGSLS
Sbjct: 853 REQLHAGMGSLS 888
Score = 29.0 bits (57), Expect(4) = 8e-063
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 972 NSKNPSQHEVVL 937
+SKNPSQHEVVL
Sbjct: 889 SSKNPSQHEVVL 854
>gb|AY551918.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS213
mRNA, complete cds
Length = 1134
Score = 176 bits (379), Expect(3) = 1e-090
Identities = 73/82 (89%), Positives = 77/82 (93%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSA
Sbjct: 138 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 317
Query: 382 GVTKTLERYQHCCYNAQDSNNS 447
G+ KTLE+Y CCYNAQ SN++
Sbjct: 318 GINKTLEKYNSCCYNAQGSNSA 383
Score = 171 bits (369), Expect(3) = 1e-090
Identities = 71/93 (76%), Positives = 84/93 (90%)
Frame = +1 / +3
Query: 457 ESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQV 636
E QSWYQEMS+L+ K E LQR+QRH+LGEDLGPLS+KELQQLEKQLE +LSQARQRKTQ+
Sbjct: 396 EHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQI 575
Query: 637 MMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
MMEQV++LRR ER LGE+N+QLK+KLEAE S+
Sbjct: 576 MMEQVDDLRRKERQLGELNKQLKNKLEAEADSS 674
Score = 99.1 bits (210), Expect(4) = 3e-043
Identities = 48/77 (62%), Positives = 50/77 (64%)
Frame = -2 / -3
Query: 419 QQC*YLSKVLVTPALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLIL 240
QQ Y S VL PALPNS SLPR EKMM AFL RPLRRLEKVT RLIL
Sbjct: 355 QQLLYFSNVLFIPALPNSYSLPRLEKMMSATSASQSTESSYAFLRRPLRRLEKVTCRLIL 176
Query: 239 FSIRFSSTRPLPMPTSS 189
FS+RFSST PLP+ S
Sbjct: 175 FSMRFSSTLPLPISDRS 125
Score = 88.1 bits (186), Expect(2) = 7e-028
Identities = 43/77 (55%), Positives = 48/77 (62%)
Frame = -1 / -2
Query: 432 LSIVAAMLIPF*SFSYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDL 253
LS+V A ++ F Y ER L VAEHGELV LLE+AVAALGEGDL
Sbjct: 368 LSVVTATIVLFQCLVYSGATEFVQLATAGEDDERHLRVAEHGELVRLLEEAVAALGEGDL 189
Query: 252 AVDLVLDPLQLDASPPH 202
VDLVLD LQL+ SPPH
Sbjct: 188 PVDLVLDALQLNPSPPH 138
Score = 82.6 bits (174), Expect(4) = 3e-043
Identities = 41/91 (45%), Positives = 46/91 (50%)
Frame = -2 / -3
Query: 734 LLQPSASSLCLSCLFXXXXXXXXXXXXXXXXXITCVFLCLACDKAHXXXXXXXXXXFTLS 555
LL SASSL SCL + CVF C ACD + F L+
Sbjct: 673 LLSASASSLFFSCLLSSPSWRSFRRRSSTCSIMICVFRCRACDSEYSSCFSSCCSSFMLN 494
Query: 554 GPRSSPSKCL*VRCKASNFALSFDISWYQL* 462
GPRSSPS CL* R + S+ LS DISWYQL*
Sbjct: 493 GPRSSPSMCL*ERWRHSSLVLSLDISWYQL* 401
Score = 81.3 bits (171), Expect(3) = 1e-022
Identities = 40/95 (42%), Positives = 51/95 (53%)
Frame = +2 / +1
Query: 455 LNLRAGTRKCQN*GQNSRPCSALRGTCLARTLGH*V*XXXXXXXXXXXVLCHRQDRERRK 634
+N+RAGT++CQ + +ALRGTCL + L H* * CHR D ER K
Sbjct: 394 VNIRAGTKRCQGSRLSLNVSNALRGTCLVKILDH*A*RNCSSWRSNLSTHCHRLDNERHK 573
Query: 635 L*WSKWKSFAERSVTWEK*TGNSNTSSKLKAVATT 739
*WS+ FA R+ + E N TS KLK +A T
Sbjct: 574 S*WSRSTIFAGRNASLESSISN*KTS*KLKPIAAT 678
Score = 61.1 bits (127), Expect(2) = 7e-028
Identities = 40/92 (43%), Positives = 45/92 (48%)
Frame = -3 / -1
Query: 733 CYSLQLRACV*VACSFLPGDAPFCEALPLAPS*LASFSVLPVTKHILAVSLAAAIPSHSV 554
CY LQL AC VA L P E APS* SF V PVT S AAA+P S+
Sbjct: 672 CYRLQLLACFSVAY*ALQAGVPSGEDRRPAPS*FVSFVVEPVTVSTQVASPAAAVPLCSM 493
Query: 553 AQGPRQASASECAARPRILPSVLTFPGTSSEI 458
Q QA ASE + LT GTSS++
Sbjct: 492 VQDLHQACASESVGDIQA*S*ALTSLGTSSDV 397
Score = 52.4 bits (108), Expect(3) = 1e-022
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +3 / +2
Query: 222 AEADREQDQPPGHLLQAPQRPAQE 293
AEA REQDQP GHLLQAPQRP QE
Sbjct: 158 AEAHREQDQPAGHLLQAPQRPPQE 229
Score = 32.7 bits (65), Expect(4) = 3e-043
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / -3
Query: 914 ILLTASGGGNW**GYPICRVGSQSIA 837
+LL + G * YPICRVGSQSI+
Sbjct: 835 LLLGLAASGRTN**YPICRVGSQSIS 758
Score = 29.9 bits (59), Expect(3) = 1e-090
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 841 MDCEPTLQIGY 873
+DCEPTLQIGY
Sbjct: 762 IDCEPTLQIGY 794
Score = 22.1 bits (42), Expect(4) = 3e-043
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3 / -1
Query: 436 NLEHCSSNVDTF 401
NLE C+SN TF
Sbjct: 372 NLERCNSNYCTF 337
Score = 21.7 bits (41), Expect(3) = 1e-022
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 940 NNFMLGWVL* 969
NNF++GW L*
Sbjct: 858 NNFVMGWPL* 887
>dbj|AK070540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057B01, full
insert sequence
Length = 963
Score = 176 bits (379), Expect(3) = 1e-090
Identities = 73/82 (89%), Positives = 77/82 (93%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSA
Sbjct: 32 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 211
Query: 382 GVTKTLERYQHCCYNAQDSNNS 447
G+ KTLE+Y CCYNAQ SN++
Sbjct: 212 GINKTLEKYNSCCYNAQGSNSA 277
Score = 171 bits (369), Expect(3) = 1e-090
Identities = 71/93 (76%), Positives = 84/93 (90%)
Frame = +1 / +2
Query: 457 ESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQV 636
E QSWYQEMS+L+ K E LQR+QRH+LGEDLGPLS+KELQQLEKQLE +LSQARQRKTQ+
Sbjct: 290 EHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQI 469
Query: 637 MMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
MMEQV++LRR ER LGE+N+QLK+KLEAE S+
Sbjct: 470 MMEQVDDLRRKERQLGELNKQLKNKLEAEADSS 568
Score = 99.1 bits (210), Expect(4) = 3e-043
Identities = 48/77 (62%), Positives = 50/77 (64%)
Frame = -2 / -1
Query: 419 QQC*YLSKVLVTPALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLIL 240
QQ Y S VL PALPNS SLPR EKMM AFL RPLRRLEKVT RLIL
Sbjct: 249 QQLLYFSNVLFIPALPNSYSLPRLEKMMSATSASQSTESSYAFLRRPLRRLEKVTCRLIL 70
Query: 239 FSIRFSSTRPLPMPTSS 189
FS+RFSST PLP+ S
Sbjct: 69 FSMRFSSTLPLPISDRS 19
Score = 88.1 bits (186), Expect(2) = 7e-028
Identities = 43/77 (55%), Positives = 48/77 (62%)
Frame = -1 / -3
Query: 432 LSIVAAMLIPF*SFSYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDL 253
LS+V A ++ F Y ER L VAEHGELV LLE+AVAALGEGDL
Sbjct: 262 LSVVTATIVLFQCLVYSGATEFVQLATAGEDDERHLRVAEHGELVRLLEEAVAALGEGDL 83
Query: 252 AVDLVLDPLQLDASPPH 202
VDLVLD LQL+ SPPH
Sbjct: 82 PVDLVLDALQLNPSPPH 32
Score = 82.6 bits (174), Expect(4) = 3e-043
Identities = 41/91 (45%), Positives = 46/91 (50%)
Frame = -2 / -1
Query: 734 LLQPSASSLCLSCLFXXXXXXXXXXXXXXXXXITCVFLCLACDKAHXXXXXXXXXXFTLS 555
LL SASSL SCL + CVF C ACD + F L+
Sbjct: 567 LLSASASSLFFSCLLSSPSWRSFRRRSSTCSIMICVFRCRACDSEYSSCFSSCCSSFMLN 388
Query: 554 GPRSSPSKCL*VRCKASNFALSFDISWYQL* 462
GPRSSPS CL* R + S+ LS DISWYQL*
Sbjct: 387 GPRSSPSMCL*ERWRHSSLVLSLDISWYQL* 295
Score = 81.3 bits (171), Expect(3) = 8e-023
Identities = 40/95 (42%), Positives = 51/95 (53%)
Frame = +2 / +3
Query: 455 LNLRAGTRKCQN*GQNSRPCSALRGTCLARTLGH*V*XXXXXXXXXXXVLCHRQDRERRK 634
+N+RAGT++CQ + +ALRGTCL + L H* * CHR D ER K
Sbjct: 288 VNIRAGTKRCQGSRLSLNVSNALRGTCLVKILDH*A*RNCSSWRSNLSTHCHRLDNERHK 467
Query: 635 L*WSKWKSFAERSVTWEK*TGNSNTSSKLKAVATT 739
*WS+ FA R+ + E N TS KLK +A T
Sbjct: 468 S*WSRSTIFAGRNASLESSISN*KTS*KLKPIAAT 572
Score = 61.1 bits (127), Expect(2) = 7e-028
Identities = 40/92 (43%), Positives = 45/92 (48%)
Frame = -3 / -2
Query: 733 CYSLQLRACV*VACSFLPGDAPFCEALPLAPS*LASFSVLPVTKHILAVSLAAAIPSHSV 554
CY LQL AC VA L P E APS* SF V PVT S AAA+P S+
Sbjct: 566 CYRLQLLACFSVAY*ALQAGVPSGEDRRPAPS*FVSFVVEPVTVSTQVASPAAAVPLCSM 387
Query: 553 AQGPRQASASECAARPRILPSVLTFPGTSSEI 458
Q QA ASE + LT GTSS++
Sbjct: 386 VQDLHQACASESVGDIQA*S*ALTSLGTSSDV 291
Score = 52.4 bits (108), Expect(3) = 8e-023
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +3 / +1
Query: 222 AEADREQDQPPGHLLQAPQRPAQE 293
AEA REQDQP GHLLQAPQRP QE
Sbjct: 52 AEAHREQDQPAGHLLQAPQRPPQE 123
Score = 32.7 bits (65), Expect(4) = 3e-043
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / -1
Query: 914 ILLTASGGGNW**GYPICRVGSQSIA 837
+LL + G * YPICRVGSQSI+
Sbjct: 729 LLLGLAASGRTN**YPICRVGSQSIS 652
Score = 29.9 bits (59), Expect(3) = 1e-090
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 841 MDCEPTLQIGY 873
+DCEPTLQIGY
Sbjct: 656 IDCEPTLQIGY 688
Score = 22.1 bits (42), Expect(4) = 3e-043
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3 / -2
Query: 436 NLEHCSSNVDTF 401
NLE C+SN TF
Sbjct: 266 NLERCNSNYCTF 231
Score = 21.7 bits (41), Expect(3) = 8e-023
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 940 NNFMLGWVL* 969
NNF++GW L*
Sbjct: 752 NNFVMGWPL* 781
>ref|XM_473638.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 750
Score = 176 bits (379), Expect(3) = 1e-090
Identities = 73/82 (89%), Positives = 77/82 (93%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSA
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 180
Query: 382 GVTKTLERYQHCCYNAQDSNNS 447
G+ KTLE+Y CCYNAQ SN++
Sbjct: 181 GINKTLEKYNSCCYNAQGSNSA 246
Score = 171 bits (369), Expect(3) = 1e-090
Identities = 71/93 (76%), Positives = 84/93 (90%)
Frame = +1 / +1
Query: 457 ESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQV 636
E QSWYQEMS+L+ K E LQR+QRH+LGEDLGPLS+KELQQLEKQLE +LSQARQRKTQ+
Sbjct: 259 EHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQI 438
Query: 637 MMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
MMEQV++LRR ER LGE+N+QLK+KLEAE S+
Sbjct: 439 MMEQVDDLRRKERQLGELNKQLKNKLEAEADSS 537
Score = 98.2 bits (208), Expect(4) = 6e-043
Identities = 47/72 (65%), Positives = 48/72 (66%)
Frame = -2 / -2
Query: 419 QQC*YLSKVLVTPALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLIL 240
QQ Y S VL PALPNS SLPR EKMM AFL RPLRRLEKVT RLIL
Sbjct: 218 QQLLYFSNVLFIPALPNSYSLPRLEKMMSATSASQSTESSYAFLRRPLRRLEKVTCRLIL 39
Query: 239 FSIRFSSTRPLP 204
FS+RFSST PLP
Sbjct: 38 FSMRFSSTLPLP 3
Score = 88.1 bits (186), Expect(2) = 7e-028
Identities = 43/77 (55%), Positives = 48/77 (62%)
Frame = -1 / -1
Query: 432 LSIVAAMLIPF*SFSYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDL 253
LS+V A ++ F Y ER L VAEHGELV LLE+AVAALGEGDL
Sbjct: 231 LSVVTATIVLFQCLVYSGATEFVQLATAGEDDERHLRVAEHGELVRLLEEAVAALGEGDL 52
Query: 252 AVDLVLDPLQLDASPPH 202
VDLVLD LQL+ SPPH
Sbjct: 51 PVDLVLDALQLNPSPPH 1
Score = 82.6 bits (174), Expect(4) = 6e-043
Identities = 41/91 (45%), Positives = 46/91 (50%)
Frame = -2 / -2
Query: 734 LLQPSASSLCLSCLFXXXXXXXXXXXXXXXXXITCVFLCLACDKAHXXXXXXXXXXFTLS 555
LL SASSL SCL + CVF C ACD + F L+
Sbjct: 536 LLSASASSLFFSCLLSSPSWRSFRRRSSTCSIMICVFRCRACDSEYSSCFSSCCSSFMLN 357
Query: 554 GPRSSPSKCL*VRCKASNFALSFDISWYQL* 462
GPRSSPS CL* R + S+ LS DISWYQL*
Sbjct: 356 GPRSSPSMCL*ERWRHSSLVLSLDISWYQL* 264
Score = 81.3 bits (171), Expect(3) = 5e-023
Identities = 40/95 (42%), Positives = 51/95 (53%)
Frame = +2 / +2
Query: 455 LNLRAGTRKCQN*GQNSRPCSALRGTCLARTLGH*V*XXXXXXXXXXXVLCHRQDRERRK 634
+N+RAGT++CQ + +ALRGTCL + L H* * CHR D ER K
Sbjct: 257 VNIRAGTKRCQGSRLSLNVSNALRGTCLVKILDH*A*RNCSSWRSNLSTHCHRLDNERHK 436
Query: 635 L*WSKWKSFAERSVTWEK*TGNSNTSSKLKAVATT 739
*WS+ FA R+ + E N TS KLK +A T
Sbjct: 437 S*WSRSTIFAGRNASLESSISN*KTS*KLKPIAAT 541
Score = 61.1 bits (127), Expect(2) = 7e-028
Identities = 40/92 (43%), Positives = 45/92 (48%)
Frame = -3 / -3
Query: 733 CYSLQLRACV*VACSFLPGDAPFCEALPLAPS*LASFSVLPVTKHILAVSLAAAIPSHSV 554
CY LQL AC VA L P E APS* SF V PVT S AAA+P S+
Sbjct: 535 CYRLQLLACFSVAY*ALQAGVPSGEDRRPAPS*FVSFVVEPVTVSTQVASPAAAVPLCSM 356
Query: 553 AQGPRQASASECAARPRILPSVLTFPGTSSEI 458
Q QA ASE + LT GTSS++
Sbjct: 355 VQDLHQACASESVGDIQA*S*ALTSLGTSSDV 260
Score = 52.4 bits (108), Expect(3) = 5e-023
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +3 / +3
Query: 222 AEADREQDQPPGHLLQAPQRPAQE 293
AEA REQDQP GHLLQAPQRP QE
Sbjct: 21 AEAHREQDQPAGHLLQAPQRPPQE 92
Score = 32.7 bits (65), Expect(4) = 6e-043
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / -2
Query: 914 ILLTASGGGNW**GYPICRVGSQSIA 837
+LL + G * YPICRVGSQSI+
Sbjct: 698 LLLGLAASGRTN**YPICRVGSQSIS 621
Score = 29.9 bits (59), Expect(3) = 1e-090
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 841 MDCEPTLQIGY 873
+DCEPTLQIGY
Sbjct: 625 IDCEPTLQIGY 657
Score = 22.1 bits (42), Expect(4) = 6e-043
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3 / -3
Query: 436 NLEHCSSNVDTF 401
NLE C+SN TF
Sbjct: 235 NLERCNSNYCTF 200
Score = 21.7 bits (41), Expect(3) = 5e-023
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 940 NNFMLGWVL* 969
NNF++GW L*
Sbjct: 721 NNFVMGWPL* 750
>gb|BP185086.1|BP185086 BP185086 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone pNS-YP13, mRNA
sequence
Length = 670
Score = 204 bits (440), Expect(2) = 4e-058
Identities = 87/106 (82%), Positives = 95/106 (89%)
Frame = +1 / +1
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C +N+ALSE+QSWY EMSKL+AKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE
Sbjct: 328 CCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 507
Query: 598 CALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
CALSQARQRKTQ+MMEQVEELRR ER LGE+NRQLKHKLE EG ++
Sbjct: 508 CALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTS 645
Score = 192 bits (413), Expect(3) = 6e-079
Identities = 79/82 (96%), Positives = 81/82 (98%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSA
Sbjct: 115 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 294
Query: 382 GVTKTLERYQHCCYNAQDSNNS 447
G+TKTLERYQHCCYNAQDSNN+
Sbjct: 295 GITKTLERYQHCCYNAQDSNNA 360
Score = 127 bits (272), Expect(2) = 2e-056
Identities = 56/98 (57%), Positives = 61/98 (62%)
Frame = -2 / -3
Query: 758 AACCKVV*LLQPSASSLCLSCLFXXXXXXXXXXXXXXXXXITCVFLCLACDKAHXXXXXX 579
A C + L++PS SSLCLSCL I+CVFLCLACD AH
Sbjct: 668 ACCMAL*LLVEPSTSSLCLSCLLISPS*RSFLRSSSTCSIISCVFLCLACDSAHSSCFSS 489
Query: 578 XXXXFTLSGPRSSPSKCL*VRCKASNFALSFDISWYQL 465
TLSGPRSSPSKCL*VRCKASNFA +FDISWYQL
Sbjct: 488 CCNSLTLSGPRSSPSKCL*VRCKASNFAFNFDISWYQL 375
Score = 124 bits (266), Expect(3) = 6e-079
Identities = 61/98 (62%), Positives = 67/98 (68%)
Frame = +3 / +3
Query: 441 Q*CTL*ISELVPGNVKTEGKIRGLAAHSEALAWRGPWATECEGIAAARETARMCFVTGKT 620
Q CT * ELVP NVK E KI AAHS+ALAW G W T+ + IAAA ETA MC +TG+T
Sbjct: 351 QQCTF*NPELVP*NVKVESKI*SFAAHSKALAWGGSWTTQRQRIAAAGETA*MCTITGET 530
Query: 621 EKDASYDGASGRASQNGASPGRNEQATQTQARS*RL*Q 734
EKDA+ DG SG SQ GAS G N ATQ QAR *R Q
Sbjct: 531 EKDATDDGTSGGTSQKGASAG*N**ATQAQARG*RFHQ 644
Score = 117 bits (250), Expect(2) = 9e-050
Identities = 59/95 (62%), Positives = 66/95 (69%)
Frame = -3 / -1
Query: 730 YSLQLRACV*VACSFLPGDAPFCEALPLAPS*LASFSVLPVTKHILAVSLAAAIPSHSVA 551
++LQ RAC *VA F P DAPFCE PL PS +ASFSV PV HI AVS AAAI V
Sbjct: 640 WNLQPRACA*VAY*FHPADAPFCEVPPLVPSSVASFSVSPVIVHIQAVSPAAAIL*R*VV 461
Query: 550 QGPRQASASECAARPRILPSVLTFPGTSSEIQRVH 446
Q P QASA ECAA+ +IL S LTF GT+S Q+VH
Sbjct: 460 QDPPQASAFECAAKLQILLSTLTFHGTNSGFQKVH 356
Score = 116 bits (249), Expect(2) = 2e-056
Identities = 54/81 (66%), Positives = 60/81 (74%)
Frame = -1 / -2
Query: 444 IVGILSIVAAMLIPF*SFSYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALG 265
IVGILSIVA ML+PF*S Y ERDLGVAE+G+LVGLLE+AVAALG
Sbjct: 357 IVGILSIVATMLVPF*SLCYAGAAELVELAAAGEDDERDLGVAENGQLVGLLEEAVAALG 178
Query: 264 EGDLAVDLVLDPLQLDASPPH 202
EGDL VDLVLD LQL++SPPH
Sbjct: 177 EGDLPVDLVLDALQLNSSPPH 115
Score = 105 bits (223), Expect(2) = 9e-050
Identities = 50/73 (68%), Positives = 52/73 (71%)
Frame = -2 / -3
Query: 419 QQC*YLSKVLVTPALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLIL 240
QQC YLSKV V PALPNS*SLPR EKMM AFL RPLRRLEKVT LIL
Sbjct: 332 QQCWYLSKVFVMPALPNS*SLPRLEKMMSATSASQRTDSS*AFLRRPLRRLEKVTCLLIL 153
Query: 239 FSIRFSSTRPLPM 201
FS+RFSST PLP+
Sbjct: 152 FSMRFSSTLPLPI 114
Score = 71.2 bits (149), Expect(3) = 1e-025
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +2 / +2
Query: 608 HRQDRERRKL*WSKWKSFAERSVTWEK*TGNSNTSSKLKAVATT 739
HR+DRERR *W+KW++FAERSV+W K GNS+TSS+LK T
Sbjct: 518 HRRDRERRN**WNKWRNFAERSVSWVKLIGNSSTSSRLKVPPAT 649
Score = 64.8 bits (135), Expect(3) = 2e-021
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = -1 / -2
Query: 558 QWPKVLAKQVPLSALQGLEFCPQF*HFLVPALRFRECTI 442
+W K+L KQVPLSALQ +FC Q *HF+VP L FR+C +
Sbjct: 468 EWSKILPKQVPLSALQSFKFCFQL*HFMVPTLGFRKCIV 352
Score = 54.2 bits (112), Expect(3) = 1e-025
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +2 / +2
Query: 446 VHSLNLRAGTRKCQN*GQNSRPCSALRGTCLARTLGH 556
+H L R GT KCQ+* QN + CSAL+GTCL R L H
Sbjct: 356 MHFLKPRVGTMKCQS*KQNLKLCSALKGTCLGRILDH 466
Score = 48.7 bits (100), Expect(2) = 4e-058
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3 / +3
Query: 222 AEADREQDQPPGHLLQAPQRPAQE 293
AEA REQDQ GHLLQAPQRP QE
Sbjct: 135 AEAHREQDQQAGHLLQAPQRPPQE 206
Score = 43.2 bits (88), Expect(3) = 2e-021
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3 / -1
Query: 445 YCWNLEHCSSNVDTFLK 395
+CWNLEHCS+NV TFLK
Sbjct: 358 HCWNLEHCSNNVGTFLK 308
Score = 37.3 bits (75), Expect(3) = 2e-021
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -1 / -2
Query: 738 VVATAFSFELVFELPVHFSQVTLRSAK 658
V F+ ELV ELP++F+Q+TL SAK
Sbjct: 648 VAGGTFNLELVLELPINFTQLTLLSAK 568
Score = 33.6 bits (67), Expect(3) = 1e-025
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2 / +2
Query: 392 KL*KGINIAATMLKIPTI 445
+L*KG NI ATMLKIPT+
Sbjct: 305 RL*KGTNIVATMLKIPTM 358
Score = 22.1 bits (42), Expect(3) = 6e-079
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2 / +2
Query: 731 ATTQPCSMP 757
ATT+PCS P
Sbjct: 644 ATTEPCSKP 670
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1123_G04
Length = 124666
Score = 139 bits (298), Expect(8) = 1e-072
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSA
Sbjct: 22056 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 22235
Query: 382 G 384
G
Sbjct: 22236 G 22238
Score = 88.1 bits (186), Expect(6) = 5e-043
Identities = 37/44 (84%), Positives = 42/44 (95%)
Frame = -1 / -3
Query: 333 RDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLDPLQLDASPPH 202
RDLGVAE+G+LVGLLE+AVAALGEGDL VDLVLD LQL++SPPH
Sbjct: 22187 RDLGVAENGQLVGLLEEAVAALGEGDLPVDLVLDALQLNSSPPH 22056
Score = 85.8 bits (181), Expect(5) = 5e-024
Identities = 41/61 (67%), Positives = 43/61 (70%)
Frame = -2 / -1
Query: 383 PALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLILFSIRFSSTRPLP 204
PALPNS*SLPR EKMM AFL RPLRRLEKVT LILFS+RFSST PLP
Sbjct: 22237 PALPNS*SLPRLEKMMSATSASQRTDSS*AFLRRPLRRLEKVTCLLILFSMRFSSTLPLP 22058
Query: 203 M 201
+
Sbjct: 22057 I 22055
Score = 80.8 bits (170), Expect(8) = 1e-072
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +1 / +2
Query: 526 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMME 645
RHLLGEDLGPLSVKELQQLEKQLECALSQARQRK +++
Sbjct: 27302 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRKVYGILQ 27421
Score = 55.6 bits (115), Expect(6) = 5e-043
Identities = 24/39 (61%), Positives = 24/39 (61%)
Frame = -2 / -2
Query: 626 FLCLACDKAHXXXXXXXXXXFTLSGPRSSPSKCL*VRCK 510
FLCLACD AH TLSGPRSSPSKCL* K
Sbjct: 27402 FLCLACDSAHSSCFSSCCNSLTLSGPRSSPSKCL*ESSK 27286
Score = 55.6 bits (115), Expect(8) = 1e-072
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 385 VTKTLERYQHCCYNAQDSNNS 447
+TKTLERYQHCCYNAQDSNN+
Sbjct: 24997 ITKTLERYQHCCYNAQDSNNA 25059
Score = 53.8 bits (111), Expect(7) = 5e-022
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +3 / +1
Query: 507 GLAAHSEALAWRGPWATECEGIAAARETARMCFVTGKTEK 626
G A +ALAW G W T+ + IAAA ETA MC +TG+TEK
Sbjct: 27283 GFA*FLKALAWGGSWTTQRQRIAAAGETA*MCTITGETEK 27402
Score = 50.1 bits (103), Expect(6) = 5e-043
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -2 / -2
Query: 533 KCL*VRCKASNFALSFDISWYQL 465
K L*VRCKASNFA +FDISWYQL
Sbjct: 27078 KYL*VRCKASNFAFNFDISWYQL 27010
Score = 50.1 bits (103), Expect(8) = 1e-072
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +1 / +2
Query: 463 QSWYQEMSKLRAKFEALQRTQRH 531
+SWY EMSKL+AKFEALQRTQR+
Sbjct: 27008 KSWYHEMSKLKAKFEALQRTQRY 27076
Score = 48.7 bits (100), Expect(7) = 5e-022
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3 / +2
Query: 222 AEADREQDQPPGHLLQAPQRPAQE 293
AEA REQDQ GHLLQAPQRP QE
Sbjct: 22076 AEAHREQDQQAGHLLQAPQRPPQE 22147
Score = 43.2 bits (88), Expect(6) = 5e-043
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3 / -1
Query: 445 YCWNLEHCSSNVDTFLK 395
+CWNLEHCS+NV TFLK
Sbjct: 25057 HCWNLEHCSNNVGTFLK 25007
Score = 41.4 bits (84), Expect(5) = 5e-024
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -3 / -3
Query: 625 FSVLPVTKHILAVSLAAAIPSHSVAQGPRQASASECAARPR 503
FSV PV HI AVS AAAI V Q P QASA + A+P+
Sbjct: 27401 FSVSPVIVHIQAVSPAAAIL*R*VVQDPPQASAFKNQAKPK 27279
Score = 41.4 bits (84), Expect(6) = 5e-043
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 878 *GYPICRVGSQSIATEWAGGCT 813
* YPIC+VGS+S+A E GGCT
Sbjct: 29376 *SYPICKVGSESMAAECGGGCT 29311
Score = 39.1 bits (79), Expect(8) = 1e-072
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1 / +2
Query: 814 VHPPAHSVAMDCEPTLQIG 870
V PP HS AMD EPTLQIG
Sbjct: 29312 VQPPPHSAAMDSEPTLQIG 29368
Score = 36.8 bits (74), Expect(5) = 5e-024
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1 / -2
Query: 444 IVGILSIVAAMLIPF*SFSY 385
IVGILSIVA ML+PF*S Y
Sbjct: 25056 IVGILSIVATMLVPF*SLCY 24997
Score = 35.9 bits (72), Expect(8) = 1e-072
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1 / +1
Query: 871 YPHHQFPPPEAVNNIPRSAATGENNFMLGWVL* 969
YPH P + A ENNFMLGWVL*
Sbjct: 29545 YPHQFVPAEANTIQRSTAPAGAENNFMLGWVL* 29643
Score = 35.4 bits (71), Expect(6) = 5e-043
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -2 / -3
Query: 968 QRTHPSMKLFSPVAALLGILLTASGGGNW**GY 870
QRTHPSMKLFS A + + + + G **GY
Sbjct: 29642 QRTHPSMKLFSAPAGAVLL*IVFASAGTN**GY 29544
Score = 34.1 bits (68), Expect(7) = 5e-022
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 938 RTTSCWDGFFE 970
RTTSCWDGFFE
Sbjct: 29612 RTTSCWDGFFE 29644
Score = 33.6 bits (67), Expect(7) = 5e-022
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2 / +2
Query: 392 KL*KGINIAATMLKIPTI 445
+L*KG NI ATMLKIPT+
Sbjct: 25004 RL*KGTNIVATMLKIPTM 25057
Score = 32.7 bits (65), Expect(8) = 1e-072
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / +1
Query: 670 ERHLGEMNRQLKHKL 714
ER LGE+NRQLKHK+
Sbjct: 29083 ERQLGEINRQLKHKV 29127
Score = 31.3 bits (62), Expect(7) = 5e-022
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +3 / +1
Query: 465 ELVPGNVKTEGKIRGLAAHSE 527
ELVP NVK E KI AAHS+
Sbjct: 27010 ELVP*NVKVESKI*SFAAHSK 27072
Score = 30.9 bits (61), Expect(7) = 5e-022
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2 / +3
Query: 743 PCSMPPAGQLPAAPSWSMTAPPIKCIRLPTQLLWTVNPLCKSGTL 877
P + P + P + P C R T WT+NP CK G +
Sbjct: 29241 PATTEPCSKPPGLRAPWWRMAPHTCSRRHTPRPWTLNPPCKLGKI 29375
Score = 30.9 bits (61), Expect(7) = 5e-022
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1 / +1
Query: 625 KTQVMMEQVEELRRTERHLGEMNR 696
+TQ+MMEQVEELRR + ++++
Sbjct: 28729 QTQLMMEQVEELRRKVHYQSKVSQ 28800
Score = 30.4 bits (60), Expect(5) = 5e-024
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3 / -3
Query: 523 ECAARPRILPSVLTFPGTSS 464
ECAA+ +IL S LTF GT+S
Sbjct: 27068 ECAAKLQILLSTLTFHGTNS 27009
Score = 29.9 bits (59), Expect(8) = 1e-072
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 626 RRKL*WSKWKSFAERSV 676
RR *W+KW++FAER +
Sbjct: 28730 RRN**WNKWRNFAERYI 28780
Score = 29.0 bits (57), Expect(5) = 5e-024
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 972 NSKNPSQHEVVL 937
+SKNPSQHEVVL
Sbjct: 29646 SSKNPSQHEVVL 29611
>gb|AACV01010373.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010373, whole
genome shotgun sequence
Length = 17272
Score = 139 bits (298), Expect(7) = 1e-059
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +1 / -2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSA
Sbjct: 15066 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 14887
Query: 382 G 384
G
Sbjct: 14886 G 14884
Score = 89.0 bits (188), Expect(4) = 4e-023
Identities = 42/65 (64%), Positives = 44/65 (67%)
Frame = -2 / +2
Query: 383 PALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLILFSIRFSSTRPLP 204
PALPNS SLPR EKMM AFL RPLRRLEKVT RLILFS+RFSST PLP
Sbjct: 14885 PALPNSYSLPRLEKMMSATSASQSTESSYAFLRRPLRRLEKVTCRLILFSMRFSSTLPLP 15064
Query: 203 MPTSS 189
+ S
Sbjct: 15065 ISDRS 15079
Score = 72.5 bits (152), Expect(7) = 1e-059
Identities = 30/34 (88%), Positives = 33/34 (97%)
Frame = +1 / -1
Query: 526 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRK 627
RH+LGEDLGPLS+KELQQLEKQLE +LSQARQRK
Sbjct: 12313 RHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRK 12212
Score = 42.3 bits (86), Expect(7) = 1e-059
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 466 SWYQEMSKLRAKFEALQRTQRH 531
SWYQEMS+L+ K E LQR+QR+
Sbjct: 12458 SWYQEMSRLKTKLECLQRSQRY 12393
Score = 40.0 bits (81), Expect(7) = 1e-059
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1 / -2
Query: 385 VTKTLERYQHCCYNAQDSNNS 447
+ KTLE+Y CCYNAQ SN++
Sbjct: 12945 INKTLEKYNSCCYNAQGSNSA 12883
Score = 37.7 bits (76), Expect(4) = 4e-023
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2 / +3
Query: 626 FLCLACDKAHXXXXXXXXXXFTLSGPRSSPSKCL 525
F C ACD + F L+GPRSSPS CL
Sbjct: 12213 FRCRACDSEYSSCFSSCCSSFMLNGPRSSPSMCL 12314
Score = 30.4 bits (60), Expect(4) = 4e-023
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / +1
Query: 527 L*VRCKASNFALSFDISWYQL 465
L* R + S+ LS DISWYQL
Sbjct: 12397 L*ERWRHSSLVLSLDISWYQL 12459
Score = 30.4 bits (60), Expect(4) = 4e-023
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +2
Query: 872 YPICRVGSQSIA 837
YPICRVGSQSI+
Sbjct: 9764 YPICRVGSQSIS 9799
Score = 28.6 bits (56), Expect(7) = 1e-059
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1 / -2
Query: 670 ERHLGEMNRQLKHKL 714
ER LGE+N+QLK+K+
Sbjct: 10107 ERQLGELNKQLKNKV 10063
Score = 28.6 bits (56), Expect(7) = 1e-059
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +1 / -1
Query: 625 KTQVMMEQVEELRR 666
+TQ+MMEQV++LRR
Sbjct: 11512 QTQIMMEQVDDLRR 11471
Score = 26.7 bits (52), Expect(7) = 1e-059
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / -2
Query: 841 MDCEPTLQIG 870
+DCEPTLQIG
Sbjct: 9795 IDCEPTLQIG 9766
>dbj|AK072867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143P16, full
insert sequence
Length = 1203
Score = 138 bits (295), Expect(4) = 1e-059
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1 / +3
Query: 190 EEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYE 369
EE+GMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYE
Sbjct: 99 EEIGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYE 278
Query: 370 FGS 378
F S
Sbjct: 279 FCS 287
Score = 103 bits (219), Expect(4) = 1e-059
Identities = 48/99 (48%), Positives = 66/99 (66%)
Frame = +1 / +3
Query: 463 QSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMM 642
QS E KL+A+ E LQRTQR+LLGEDLG L +KEL+QLEKQL+ +L R +TQ M+
Sbjct: 381 QSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHML 560
Query: 643 EQVEELRRTERHLGEMNRQLKHKLEAEGCSNYTTLQHAA 759
+Q+ +L+R E+ L E N+ L+ KLE + +H A
Sbjct: 561 DQLTDLQRREQMLCEANKCLRRKLEESNQLHGQVWEHGA 677
Score = 25.8 bits (50), Expect(4) = 1e-059
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1 / +3
Query: 829 HSVAMDCEPTLQIGYPHHQ 885
HS+ EPTLQIG+ Q
Sbjct: 753 HSLEAAAEPTLQIGFTPEQ 809
Score = 24.9 bits (48), Expect(4) = 1e-059
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1 / +3
Query: 385 VTKTLERYQHCCYNAQDS 438
+T+TLERYQ Y D+
Sbjct: 297 MTRTLERYQKFSYGGPDT 350
>gb|U78892.1|OSU78892 Oryza sativa MADS box protein (OsMADS8) mRNA, complete cds
Length = 1179
Score = 138 bits (295), Expect(4) = 1e-059
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1 / +1
Query: 190 EEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYE 369
EE+GMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYE
Sbjct: 97 EEIGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYE 276
Query: 370 FGS 378
F S
Sbjct: 277 FCS 285
Score = 103 bits (219), Expect(4) = 1e-059
Identities = 48/99 (48%), Positives = 66/99 (66%)
Frame = +1 / +1
Query: 463 QSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMM 642
QS E KL+A+ E LQRTQR+LLGEDLG L +KEL+QLEKQL+ +L R +TQ M+
Sbjct: 379 QSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHML 558
Query: 643 EQVEELRRTERHLGEMNRQLKHKLEAEGCSNYTTLQHAA 759
+Q+ +L+R E+ L E N+ L+ KLE + +H A
Sbjct: 559 DQLTDLQRREQMLCEANKCLRRKLEESNQLHGQVWEHGA 675
Score = 25.8 bits (50), Expect(4) = 1e-059
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1 / +1
Query: 829 HSVAMDCEPTLQIGYPHHQ 885
HS+ EPTLQIG+ Q
Sbjct: 751 HSLEAAAEPTLQIGFTPEQ 807
Score = 24.9 bits (48), Expect(4) = 1e-059
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1 / +1
Query: 385 VTKTLERYQHCCYNAQDS 438
+T+TLERYQ Y D+
Sbjct: 295 MTRTLERYQKFSYGGPDT 348
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 139 bits (298), Expect(6) = 2e-059
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSA
Sbjct: 3059603 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 3059782
Query: 382 G 384
G
Sbjct: 3059783 G 3059785
Score = 105 bits (224), Expect(2) = 4e-021
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = +1 / +3
Query: 190 EEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYE 369
E MGRG++ ++RI+N +RQVTFSKRRNGLLKKA ELS+LCDAEV L++FS G+LYE
Sbjct: 5640480 ESEEMGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYE 5640659
Query: 370 FGS 378
F S
Sbjct: 5640660 FSS 5640668
Score = 88.1 bits (186), Expect(6) = 3e-034
Identities = 37/44 (84%), Positives = 42/44 (95%)
Frame = -1 / -2
Query: 333 RDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLDPLQLDASPPH 202
RDLGVAE+G+LVGLLE+AVAALGEGDL VDLVLD LQL++SPPH
Sbjct: 3059734 RDLGVAENGQLVGLLEEAVAALGEGDLPVDLVLDALQLNSSPPH 3059603
Score = 80.8 bits (170), Expect(6) = 2e-059
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +1 / +1
Query: 526 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMME 645
RHLLGEDLGPLSVKELQQLEKQLECALSQARQRK +++
Sbjct: 3064849 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRKVYGILQ 3064968
Score = 55.6 bits (115), Expect(6) = 3e-034
Identities = 24/39 (61%), Positives = 24/39 (61%)
Frame = -2 / -1
Query: 626 FLCLACDKAHXXXXXXXXXXFTLSGPRSSPSKCL*VRCK 510
FLCLACD AH TLSGPRSSPSKCL* K
Sbjct: 3064949 FLCLACDSAHSSCFSSCCNSLTLSGPRSSPSKCL*ESSK 3064833
Score = 55.6 bits (115), Expect(6) = 2e-059
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 385 VTKTLERYQHCCYNAQDSNNS 447
+TKTLERYQHCCYNAQDSNN+
Sbjct: 3062544 ITKTLERYQHCCYNAQDSNNA 3062606
Score = 50.1 bits (103), Expect(6) = 3e-034
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -2 / -1
Query: 533 KCL*VRCKASNFALSFDISWYQL 465
K L*VRCKASNFA +FDISWYQL
Sbjct: 3064625 KYL*VRCKASNFAFNFDISWYQL 3064557
Score = 50.1 bits (103), Expect(6) = 2e-059
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +1 / +1
Query: 463 QSWYQEMSKLRAKFEALQRTQRH 531
+SWY EMSKL+AKFEALQRTQR+
Sbjct: 3064555 KSWYHEMSKLKAKFEALQRTQRY 3064623
Score = 43.2 bits (88), Expect(6) = 3e-034
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3 / -3
Query: 445 YCWNLEHCSSNVDTFLK 395
+CWNLEHCS+NV TFLK
Sbjct: 3062604 HCWNLEHCSNNVGTFLK 3062554
Score = 41.4 bits (84), Expect(6) = 3e-034
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -2 / -1
Query: 878 *GYPICRVGSQSIATEWAGGCT 813
* YPIC+VGS+S+A E GGCT
Sbjct: 3066923 *SYPICKVGSESMAAECGGGCT 3066858
Score = 39.1 bits (79), Expect(6) = 2e-059
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 814 VHPPAHSVAMDCEPTLQIG 870
V PP HS AMD EPTLQIG
Sbjct: 3066859 VQPPPHSAAMDSEPTLQIG 3066915
Score = 37.3 bits (75), Expect(2) = 4e-021
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1 / +1
Query: 526 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRK 627
R + GE+L LS+ ELQQLEK LE L + K
Sbjct: 7225990 RQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTK 7226091
Score = 35.9 bits (72), Expect(6) = 2e-059
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1 / +3
Query: 871 YPHHQFPPPEAVNNIPRSAATGENNFMLGWVL* 969
YPH P + A ENNFMLGWVL*
Sbjct: 3067092 YPHQFVPAEANTIQRSTAPAGAENNFMLGWVL* 3067190
Score = 35.4 bits (71), Expect(6) = 3e-034
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -2 / -2
Query: 968 QRTHPSMKLFSPVAALLGILLTASGGGNW**GY 870
QRTHPSMKLFS A + + + + G **GY
Sbjct: 3067189 QRTHPSMKLFSAPAGAVLL*IVFASAGTN**GY 3067091
>dbj|AK070981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O08, full
insert sequence
Length = 1188
Score = 125 bits (268), Expect(3) = 2e-058
Identities = 52/60 (86%), Positives = 59/60 (98%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVALIIFSGRG+L+EF S+
Sbjct: 89 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 268
Score = 112 bits (239), Expect(3) = 2e-058
Identities = 46/101 (45%), Positives = 71/101 (70%)
Frame = +1 / +2
Query: 433 DSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQ 612
+S ++A E++ YQE KL+ + E LQ TQR++LGEDLGPLS+KEL+QLE Q+E +L Q
Sbjct: 314 NSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQ 493
Query: 613 ARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
R RK Q +++Q+ +L+ E+ L ++N+ L+ KL+ N
Sbjct: 494 VRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAEN 616
Score = 32.2 bits (64), Expect(3) = 2e-058
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1 / +2
Query: 376 SAGVTKTLERYQHCCYNAQDS 438
S+ + KTLERY+ C YN+QD+
Sbjct: 266 SSCMYKTLERYRSCNYNSQDA 328
>dbj|AK069728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029M13, full
insert sequence
Length = 1152
Score = 125 bits (268), Expect(3) = 2e-058
Identities = 52/60 (86%), Positives = 59/60 (98%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVALIIFSGRG+L+EF S+
Sbjct: 93 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 272
Score = 111 bits (238), Expect(3) = 2e-058
Identities = 46/101 (45%), Positives = 71/101 (70%)
Frame = +1 / +3
Query: 433 DSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQ 612
+S ++A E++ YQE KL+ + E LQ TQR++LGEDLGPLS+KEL+QLE Q+E +L Q
Sbjct: 318 NSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQ 497
Query: 613 ARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
R RK Q +++Q+ +L+ E+ L ++N+ L+ KL+ N
Sbjct: 498 IRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAEN 620
Score = 32.2 bits (64), Expect(3) = 2e-058
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 376 SAGVTKTLERYQHCCYNAQDS 438
S+ + KTLERY+ C YN+QD+
Sbjct: 270 SSCMYKTLERYRSCNYNSQDA 332
>gb|CF332154.1|CF332154 NACL--08-I21.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--08-I21, mRNA sequence
Length = 619
Score = 125 bits (268), Expect(3) = 8e-058
Identities = 52/60 (86%), Positives = 59/60 (98%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVALIIFSGRG+L+EF S+
Sbjct: 78 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 257
Score = 111 bits (238), Expect(3) = 8e-058
Identities = 46/101 (45%), Positives = 71/101 (70%)
Frame = +1 / +3
Query: 433 DSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQ 612
+S ++A E++ YQE KL+ + E LQ TQR++LGEDLGPLS+KEL+QLE Q+E +L Q
Sbjct: 303 NSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQ 482
Query: 613 ARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
R RK Q +++Q+ +L+ E+ L ++N+ L+ KL+ N
Sbjct: 483 IRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAEN 605
Score = 30.4 bits (60), Expect(3) = 8e-058
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 376 SAGVTKTLERYQHCCYNAQDS 438
S+ + KTL+RY+ C YN+QD+
Sbjct: 255 SSCMYKTLKRYRSCNYNSQDA 317
>gb|AY551917.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS212
mRNA, complete cds
Length = 1095
Score = 122 bits (260), Expect(2) = 8e-055
Identities = 55/114 (48%), Positives = 77/114 (67%)
Frame = +1 / +3
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGP 555
S+ + KTLERYQ Y +QD+ E Q+ YQE L+A E LQ++QR+LLGEDL P
Sbjct: 279 SSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAP 458
Query: 556 LSVKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
L+ EL+QLE Q+ L Q R RKTQV+++++ +L+R E+ L + NR LK KL+
Sbjct: 459 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 620
Score = 117 bits (250), Expect(2) = 8e-055
Identities = 50/72 (69%), Positives = 60/72 (83%)
Frame = +1 / +3
Query: 166 RASSDLGSEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIF 345
R DL E MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++F
Sbjct: 66 RLKRDLEREIEMMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLF 245
Query: 346 SGRGKLYEFGSA 381
S G+LY+F S+
Sbjct: 246 SHAGRLYQFSSS 281
>gb|U78890.1|OSU78890 Oryza sativa MADS box protein (OsMADS5) mRNA, complete cds
Length = 1027
Score = 123 bits (263), Expect(3) = 8e-055
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1 / +2
Query: 187 SEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLY 366
+ E MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RG+L+
Sbjct: 110 ARERSMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLF 289
Query: 367 EFGSA 381
EF ++
Sbjct: 290 EFSTS 304
Score = 104 bits (221), Expect(3) = 8e-055
Identities = 47/98 (47%), Positives = 65/98 (66%)
Frame = +1 / +2
Query: 442 NSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQ 621
++AL S YQE KL+ + E LQ TQR+LLGEDL PLS+KEL+QLE Q+E +L R
Sbjct: 371 SAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRS 550
Query: 622 RKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
K Q +++QV EL+R E+ L + N+ LK K++ N
Sbjct: 551 SKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGEN 664
Score = 30.4 bits (60), Expect(3) = 8e-055
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1 / +2
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQ 465
S+ + KTLERY+ C YN SA E++
Sbjct: 302 SSCMYKTLERYRSCNYNLNSCEASAALETE 391
>dbj|AK064184.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-B10, full
insert sequence
Length = 1022
Score = 123 bits (263), Expect(3) = 8e-055
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1 / +3
Query: 187 SEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLY 366
+ E MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RG+L+
Sbjct: 123 ARERSMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLF 302
Query: 367 EFGSA 381
EF ++
Sbjct: 303 EFSTS 317
Score = 104 bits (221), Expect(3) = 8e-055
Identities = 47/98 (47%), Positives = 65/98 (66%)
Frame = +1 / +3
Query: 442 NSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQ 621
++AL S YQE KL+ + E LQ TQR+LLGEDL PLS+KEL+QLE Q+E +L R
Sbjct: 384 SAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRS 563
Query: 622 RKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
K Q +++QV EL+R E+ L + N+ LK K++ N
Sbjct: 564 SKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGEN 677
Score = 30.4 bits (60), Expect(3) = 8e-055
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1 / +3
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQ 465
S+ + KTLERY+ C YN SA E++
Sbjct: 315 SSCMYKTLERYRSCNYNLNSCEASAALETE 404
>ref|NM_185637.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 1022
Score = 123 bits (263), Expect(3) = 8e-055
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1 / +3
Query: 187 SEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLY 366
+ E MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RG+L+
Sbjct: 123 ARERSMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLF 302
Query: 367 EFGSA 381
EF ++
Sbjct: 303 EFSTS 317
Score = 104 bits (221), Expect(3) = 8e-055
Identities = 47/98 (47%), Positives = 65/98 (66%)
Frame = +1 / +3
Query: 442 NSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQ 621
++AL S YQE KL+ + E LQ TQR+LLGEDL PLS+KEL+QLE Q+E +L R
Sbjct: 384 SAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRS 563
Query: 622 RKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
K Q +++QV EL+R E+ L + N+ LK K++ N
Sbjct: 564 SKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGEN 677
Score = 30.4 bits (60), Expect(3) = 8e-055
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1 / +3
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQ 465
S+ + KTLERY+ C YN SA E++
Sbjct: 315 SSCMYKTLERYRSCNYNLNSCEASAALETE 404
>dbj|AB003324.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like
protein, complete cds, clone:E31254
Length = 1175
Score = 122 bits (260), Expect(2) = 1e-054
Identities = 55/114 (48%), Positives = 77/114 (67%)
Frame = +1 / +2
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGP 555
S+ + KTLERYQ Y +QD+ E Q+ YQE L+A E LQ++QR+LLGEDL P
Sbjct: 437 SSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAP 616
Query: 556 LSVKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
L+ EL+QLE Q+ L Q R RKTQV+++++ +L+R E+ L + NR LK KL+
Sbjct: 617 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 778
Score = 116 bits (249), Expect(2) = 1e-054
Identities = 47/63 (74%), Positives = 58/63 (92%)
Frame = +1 / +2
Query: 193 EVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEF 372
E+ MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F
Sbjct: 251 EIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQF 430
Query: 373 GSA 381
S+
Sbjct: 431 SSS 439
>gb|AY551922.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS217
mRNA, complete cds
Length = 1028
Score = 122 bits (260), Expect(2) = 1e-054
Identities = 55/114 (48%), Positives = 77/114 (67%)
Frame = +1 / +3
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGP 555
S+ + KTLERYQ Y +QD+ E Q+ YQE L+A E LQ++QR+LLGEDL P
Sbjct: 297 SSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAP 476
Query: 556 LSVKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
L+ EL+QLE Q+ L Q R RKTQV+++++ +L+R E+ L + NR LK KL+
Sbjct: 477 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 638
Score = 116 bits (249), Expect(2) = 1e-054
Identities = 47/63 (74%), Positives = 58/63 (92%)
Frame = +1 / +3
Query: 193 EVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEF 372
E+ MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F
Sbjct: 111 EIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQF 290
Query: 373 GSA 381
S+
Sbjct: 291 SSS 299
>ref|XM_469790.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 839
Score = 122 bits (260), Expect(2) = 1e-054
Identities = 55/114 (48%), Positives = 77/114 (67%)
Frame = +1 / +3
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGP 555
S+ + KTLERYQ Y +QD+ E Q+ YQE L+A E LQ++QR+LLGEDL P
Sbjct: 297 SSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAP 476
Query: 556 LSVKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
L+ EL+QLE Q+ L Q R RKTQV+++++ +L+R E+ L + NR LK KL+
Sbjct: 477 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 638
Score = 116 bits (249), Expect(2) = 1e-054
Identities = 47/63 (74%), Positives = 58/63 (92%)
Frame = +1 / +3
Query: 193 EVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEF 372
E+ MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F
Sbjct: 111 EIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQF 290
Query: 373 GSA 381
S+
Sbjct: 291 SSS 299
>dbj|AK100227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048E14, full
insert sequence
Length = 1284
Score = 120 bits (257), Expect(2) = 3e-054
Identities = 55/114 (48%), Positives = 77/114 (67%)
Frame = +1 / +3
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGP 555
S+ + KTLERYQ Y +QD+ E Q+ YQE L+A E LQ++QR+LLGEDL P
Sbjct: 462 SSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQE*VNLKAHVEILQQSQRNLLGEDLAP 641
Query: 556 LSVKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
L+ EL+QLE Q+ L Q R RKTQV+++++ +L+R E+ L + NR LK KL+
Sbjct: 642 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 803
Score = 116 bits (249), Expect(2) = 3e-054
Identities = 47/63 (74%), Positives = 58/63 (92%)
Frame = +1 / +3
Query: 193 EVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEF 372
E+ MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F
Sbjct: 276 EIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQF 455
Query: 373 GSA 381
S+
Sbjct: 456 SSS 464
>dbj|AK100263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063L04, full
insert sequence
Length = 1055
Score = 133 bits (285), Expect(4) = 6e-054
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = +1 / +1
Query: 196 VGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFG 375
+GMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF
Sbjct: 61 IGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 240
Query: 376 S 378
S
Sbjct: 241 S 243
Score = 94.1 bits (199), Expect(4) = 6e-054
Identities = 41/80 (51%), Positives = 58/80 (72%)
Frame = +1 / +1
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+A+ E LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +T+ +++Q+ E
Sbjct: 352 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 531
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ + E NR L+ KLE
Sbjct: 532 LQRKEQMVSEANRCLRRKLE 591
Score = 27.2 bits (53), Expect(4) = 6e-054
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 385 VTKTLERYQHCCY 423
+TKTLE+YQ C Y
Sbjct: 253 MTKTLEKYQKCSY 291
Score = 25.8 bits (50), Expect(4) = 6e-054
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 850 EPTLQIGYP 876
EPTLQIGYP
Sbjct: 724 EPTLQIGYP 750
>ref|XM_483487.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1056
Score = 133 bits (285), Expect(4) = 6e-054
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = +1 / +2
Query: 196 VGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFG 375
+GMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF
Sbjct: 62 IGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 241
Query: 376 S 378
S
Sbjct: 242 S 244
Score = 94.1 bits (199), Expect(4) = 6e-054
Identities = 41/80 (51%), Positives = 58/80 (72%)
Frame = +1 / +2
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+A+ E LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +T+ +++Q+ E
Sbjct: 353 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 532
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ + E NR L+ KLE
Sbjct: 533 LQRKEQMVSEANRCLRRKLE 592
Score = 27.2 bits (53), Expect(4) = 6e-054
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 385 VTKTLERYQHCCY 423
+TKTLE+YQ C Y
Sbjct: 254 MTKTLEKYQKCSY 292
Score = 25.8 bits (50), Expect(4) = 6e-054
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 850 EPTLQIGYP 876
EPTLQIGYP
Sbjct: 725 EPTLQIGYP 751
>gb|U78891.2|OSU78891 Oryza sativa MADS box protein (MADS7) mRNA, complete cds
Length = 1078
Score = 133 bits (285), Expect(4) = 6e-054
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = +1 / +3
Query: 196 VGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFG 375
+GMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF
Sbjct: 93 IGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 272
Query: 376 S 378
S
Sbjct: 273 S 275
Score = 94.1 bits (199), Expect(4) = 6e-054
Identities = 41/80 (51%), Positives = 58/80 (72%)
Frame = +1 / +3
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+A+ E LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +T+ +++Q+ E
Sbjct: 384 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 563
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ + E NR L+ KLE
Sbjct: 564 LQRKEQMVSEANRCLRRKLE 623
Score = 27.2 bits (53), Expect(4) = 6e-054
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 385 VTKTLERYQHCCY 423
+TKTLE+YQ C Y
Sbjct: 285 MTKTLEKYQKCSY 323
Score = 25.8 bits (50), Expect(4) = 6e-054
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 850 EPTLQIGYP 876
EPTLQIGYP
Sbjct: 756 EPTLQIGYP 782
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23,
complete sequence
Length = 149892
Score = 139 bits (298), Expect(6) = 2e-053
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSA
Sbjct: 84618 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 84797
Query: 382 G 384
G
Sbjct: 84798 G 84800
Score = 72.5 bits (152), Expect(6) = 2e-053
Identities = 30/34 (88%), Positives = 33/34 (97%)
Frame = +1 / +3
Query: 526 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRK 627
RH+LGEDLGPLS+KELQQLEKQLE +LSQARQRK
Sbjct: 87381 RHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRK 87482
Score = 42.3 bits (86), Expect(6) = 2e-053
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1 / +2
Query: 466 SWYQEMSKLRAKFEALQRTQRH 531
SWYQEMS+L+ K E LQR+QR+
Sbjct: 87236 SWYQEMSRLKTKLECLQRSQRY 87301
Score = 40.0 bits (81), Expect(6) = 2e-053
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 385 VTKTLERYQHCCYNAQDSNNS 447
+ KTLE+Y CCYNAQ SN++
Sbjct: 86749 INKTLEKYNSCCYNAQGSNSA 86811
Score = 28.6 bits (56), Expect(6) = 2e-053
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1 / +2
Query: 670 ERHLGEMNRQLKHKL 714
ER LGE+N+QLK+K+
Sbjct: 89588 ERQLGELNKQLKNKV 89632
Score = 28.6 bits (56), Expect(6) = 2e-053
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +1 / +1
Query: 625 KTQVMMEQVEELRR 666
+TQ+MMEQV++LRR
Sbjct: 88183 QTQIMMEQVDDLRR 88224
>gb|AY551926.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS221
mRNA, complete cds
Length = 1070
Score = 116 bits (249), Expect(2) = 3e-053
Identities = 53/110 (48%), Positives = 74/110 (67%)
Frame = +1 / +2
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGP 555
S+ + KTLERYQ Y +QD+ E Q+ YQE L+A E LQ++QR+LLGEDL P
Sbjct: 329 SSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAP 508
Query: 556 LSVKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLK 705
L+ EL+QLE Q+ L Q R RKTQV+++++ +L+R E+ L + NR LK
Sbjct: 509 LATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLK 658
Score = 116 bits (249), Expect(2) = 3e-053
Identities = 47/63 (74%), Positives = 58/63 (92%)
Frame = +1 / +2
Query: 193 EVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEF 372
E+ MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F
Sbjct: 143 EIEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQF 322
Query: 373 GSA 381
S+
Sbjct: 323 SSS 331
>gb|AY332477.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL6)
mRNA, complete cds
Length = 1025
Score = 131 bits (281), Expect(4) = 9e-053
Identities = 56/61 (91%), Positives = 59/61 (96%)
Frame = +1 / +1
Query: 196 VGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFG 375
+GMGRGRVELKRIENKINR+VTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF
Sbjct: 43 IGMGRGRVELKRIENKINRRVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 222
Query: 376 S 378
S
Sbjct: 223 S 225
Score = 91.8 bits (194), Expect(4) = 9e-053
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +1 / +1
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+A+ E LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +T+ +++Q+ E
Sbjct: 334 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 513
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ E NR L+ KLE
Sbjct: 514 LQRKEQMGSEANRCLRRKLE 573
Score = 27.2 bits (53), Expect(4) = 9e-053
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 385 VTKTLERYQHCCY 423
+TKTLE+YQ C Y
Sbjct: 235 MTKTLEKYQKCSY 273
Score = 25.8 bits (50), Expect(4) = 9e-053
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 850 EPTLQIGYP 876
EPTLQIGYP
Sbjct: 706 EPTLQIGYP 732
>emb|Y15008.1|OSY15008 Oryza sativa mRNA for M79 protein
Length = 1003
Score = 127 bits (273), Expect(4) = 6e-052
Identities = 55/59 (93%), Positives = 57/59 (96%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+VELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF S
Sbjct: 3 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 179
Score = 92.7 bits (196), Expect(4) = 6e-052
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +1 / +3
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+A+ E LQRTQR+LLGEDL L +KEL+ LEKQL+ L R +T+ +++Q+ E
Sbjct: 288 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSYLKHVRTTRTKHLVDQLTE 467
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ + E NR L+ KLE
Sbjct: 468 LQRKEQMVSEANRCLRRKLE 527
Score = 27.2 bits (53), Expect(4) = 6e-052
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 385 VTKTLERYQHCCY 423
+TKTLE+YQ C Y
Sbjct: 189 MTKTLEKYQKCSY 227
Score = 25.8 bits (50), Expect(4) = 6e-052
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 850 EPTLQIGYP 876
EPTLQIGYP
Sbjct: 660 EPTLQIGYP 686
>gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL10)
mRNA, complete cds
Length = 964
Score = 116 bits (249), Expect(2) = 5e-051
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA E+SVLCDAEVALIIFS +GKLYE+ +
Sbjct: 89 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYAT 265
Score = 109 bits (233), Expect(2) = 5e-051
Identities = 48/108 (44%), Positives = 71/108 (65%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + ++ +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 281 KILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 460
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK+Q+M+E + EL+R E+ L E N+ L+ +L
Sbjct: 461 LQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKEL 604
>gb|AY551921.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS216
mRNA, complete cds
Length = 1265
Score = 133 bits (285), Expect(4) = 1e-050
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = +1 / +3
Query: 196 VGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFG 375
+GMGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF
Sbjct: 228 IGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 407
Query: 376 S 378
S
Sbjct: 408 S 410
Score = 75.3 bits (158), Expect(4) = 1e-050
Identities = 33/71 (46%), Positives = 49/71 (69%)
Frame = +1 / +3
Query: 505 EALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLG 684
E L +R+LLGEDL L +KEL+ LEKQL+ +L R +T+ +++Q+ EL+R E+ +
Sbjct: 651 EKLCMYERNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVS 830
Query: 685 EMNRQLKHKLE 717
E NR L+ KLE
Sbjct: 831 EANRCLRRKLE 863
Score = 27.2 bits (53), Expect(4) = 1e-050
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 385 VTKTLERYQHCCY 423
+TKTLE+YQ C Y
Sbjct: 420 MTKTLEKYQKCSY 458
Score = 25.8 bits (50), Expect(4) = 1e-050
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 478 EMSKLRAKFEALQRTQR 528
E KL+A+ E LQRTQR
Sbjct: 519 EYLKLKARVENLQRTQR 569
>gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS211
mRNA, complete cds
Length = 1109
Score = 116 bits (249), Expect(2) = 2e-050
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA E+SVLCDAEVALIIFS +GKLYE+ +
Sbjct: 102 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYAT 278
Score = 107 bits (229), Expect(2) = 2e-050
Identities = 47/105 (44%), Positives = 69/105 (65%)
Frame = +1 / +3
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + ++ +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 294 KILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 473
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLK 705
LQQLE+QLE +L R RK+Q+M+E + EL+R E+ L E N+ L+
Sbjct: 474 LQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQ 608
>ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 813
Score = 116 bits (249), Expect(2) = 2e-050
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA E+SVLCDAEVALIIFS +GKLYE+ +
Sbjct: 24 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYAT 200
Score = 107 bits (229), Expect(2) = 2e-050
Identities = 47/105 (44%), Positives = 69/105 (65%)
Frame = +1 / +3
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + ++ +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 216 KILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 395
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLK 705
LQQLE+QLE +L R RK+Q+M+E + EL+R E+ L E N+ L+
Sbjct: 396 LQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQ 530
>dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N01, full
insert sequence
Length = 1284
Score = 116 bits (249), Expect(2) = 3e-050
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA E+SVLCDAEVALIIFS +GKLYE+ +
Sbjct: 308 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYAT 484
Score = 107 bits (228), Expect(2) = 3e-050
Identities = 47/104 (45%), Positives = 68/104 (65%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + ++ +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 500 KILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 679
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQL 702
LQQLE+QLE +L R RK+Q+M+E + EL+R E+ L E N+ L
Sbjct: 680 LQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVL 811
>dbj|AB003325.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like
protein, complete cds, clone:E31864
Length = 1289
Score = 118 bits (252), Expect(2) = 9e-050
Identities = 48/59 (81%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ +
Sbjct: 125 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYAT 301
Score = 104 bits (221), Expect(2) = 9e-050
Identities = 45/108 (41%), Positives = 68/108 (62%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + ++ +W E KL+AK E +Q+ +HL+GEDL L++KE
Sbjct: 317 KILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKE 496
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L RK+ +M+E + EL++ ER L E N+ L+ +L
Sbjct: 497 LQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKEL 640
>gb|AY551920.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS215
mRNA, complete cds
Length = 1136
Score = 118 bits (252), Expect(2) = 9e-050
Identities = 48/59 (81%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ +
Sbjct: 168 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYAT 344
Score = 104 bits (221), Expect(2) = 9e-050
Identities = 45/108 (41%), Positives = 68/108 (62%)
Frame = +1 / +3
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + ++ +W E KL+AK E +Q+ +HL+GEDL L++KE
Sbjct: 360 KILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKE 539
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L RK+ +M+E + EL++ ER L E N+ L+ +L
Sbjct: 540 LQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKEL 683
>ref|XM_476392.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 807
Score = 118 bits (252), Expect(2) = 9e-050
Identities = 48/59 (81%), Positives = 56/59 (94%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ +
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYAT 177
Score = 104 bits (221), Expect(2) = 9e-050
Identities = 45/108 (41%), Positives = 68/108 (62%)
Frame = +1 / +1
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + ++ +W E KL+AK E +Q+ +HL+GEDL L++KE
Sbjct: 193 KILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKE 372
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L RK+ +M+E + EL++ ER L E N+ L+ +L
Sbjct: 373 LQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKEL 516
>ref|XM_479092.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1088
Score = 118 bits (253), Expect(2) = 1e-048
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG V+L+RIENKINRQVTFSKRRNGLLKKA+E+SVLCDA+VALI+FS +GKLYEF S
Sbjct: 90 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSS 266
Score = 100 bits (212), Expect(2) = 1e-048
Identities = 43/109 (39%), Positives = 66/109 (60%)
Frame = +1 / +3
Query: 397 LERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQ 576
LERYQ ++ + + ++W E L++K +ALQ++QR LLGE L L++KELQ
Sbjct: 288 LERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQ 467
Query: 577 QLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAE 723
QLE QLE +L R +K Q++ E + EL++ E+ L N L+ +E E
Sbjct: 468 QLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETE 614
>emb|AJ011675.1|OSA011675 Oryza sativa mRNA for MADS-box protein
Length = 974
Score = 118 bits (253), Expect(2) = 1e-048
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG V+L+RIENKINRQVTFSKRRNGLLKKA+E+SVLCDA+VALI+FS +GKLYEF S
Sbjct: 77 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSS 253
Score = 100 bits (212), Expect(2) = 1e-048
Identities = 43/109 (39%), Positives = 66/109 (60%)
Frame = +1 / +2
Query: 397 LERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQ 576
LERYQ ++ + + ++W E L++K +ALQ++QR LLGE L L++KELQ
Sbjct: 275 LERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQ 454
Query: 577 QLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAE 723
QLE QLE +L R +K Q++ E + EL++ E+ L N L+ +E E
Sbjct: 455 QLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETE 601
>dbj|AK064704.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A02, full
insert sequence
Length = 1088
Score = 118 bits (253), Expect(2) = 2e-048
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG V+L+RIENKINRQVTFSKRRNGLLKKA+E+SVLCDA+VALI+FS +GKLYEF S
Sbjct: 90 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSS 266
Score = 99.6 bits (211), Expect(2) = 2e-048
Identities = 43/109 (39%), Positives = 66/109 (60%)
Frame = +1 / +3
Query: 397 LERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQ 576
LERYQ ++ + + ++W E L++K +ALQ++QR LLGE L L++KELQ
Sbjct: 288 LERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQ 467
Query: 577 QLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAE 723
QLE QLE +L R +K Q++ E + EL++ E+ L N L+ +E E
Sbjct: 468 QLEHQLEYSLKHIRSKKNQLLFESIPELQKKEKSLKNQNNVLQKLMETE 614
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 139 bits (298), Expect(4) = 1e-047
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSA
Sbjct: 3058313 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 3058492
Query: 382 G 384
G
Sbjct: 3058493 G 3058495
Score = 72.5 bits (152), Expect(4) = 1e-047
Identities = 30/34 (88%), Positives = 33/34 (97%)
Frame = +1 / +2
Query: 526 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRK 627
RH+LGEDLGPLS+KELQQLEKQLE +LSQARQRK
Sbjct: 3061076 RHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRK 3061177
Score = 42.3 bits (86), Expect(4) = 1e-047
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1 / +1
Query: 466 SWYQEMSKLRAKFEALQRTQRH 531
SWYQEMS+L+ K E LQR+QR+
Sbjct: 3060931 SWYQEMSRLKTKLECLQRSQRY 3060996
Score = 40.0 bits (81), Expect(4) = 1e-047
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 385 VTKTLERYQHCCYNAQDSNNS 447
+ KTLE+Y CCYNAQ SN++
Sbjct: 3060444 INKTLEKYNSCCYNAQGSNSA 3060506
>gb|AACV01005163.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005163, whole
genome shotgun sequence
Length = 11617
Score = 80.8 bits (170), Expect(8) = 5e-047
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +1 / -3
Query: 526 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMME 645
RHLLGEDLGPLSVKELQQLEKQLECALSQARQRK +++
Sbjct: 7736 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRKVYGILQ 7617
Score = 55.6 bits (115), Expect(6) = 3e-030
Identities = 24/39 (61%), Positives = 24/39 (61%)
Frame = -2 / +1
Query: 626 FLCLACDKAHXXXXXXXXXXFTLSGPRSSPSKCL*VRCK 510
FLCLACD AH TLSGPRSSPSKCL* K
Sbjct: 7636 FLCLACDSAHSSCFSSCCNSLTLSGPRSSPSKCL*ESSK 7752
Score = 55.6 bits (115), Expect(8) = 5e-047
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1 / -2
Query: 385 VTKTLERYQHCCYNAQDSNNS 447
+TKTLERYQHCCYNAQDSNN+
Sbjct: 10041 ITKTLERYQHCCYNAQDSNNA 9979
Score = 50.1 bits (103), Expect(6) = 3e-030
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -2 / +1
Query: 533 KCL*VRCKASNFALSFDISWYQL 465
K L*VRCKASNFA +FDISWYQL
Sbjct: 7960 KYL*VRCKASNFAFNFDISWYQL 8028
Score = 50.1 bits (103), Expect(8) = 5e-047
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +1 / -3
Query: 463 QSWYQEMSKLRAKFEALQRTQRH 531
+SWY EMSKL+AKFEALQRTQR+
Sbjct: 8030 KSWYHEMSKLKAKFEALQRTQRY 7962
Score = 43.2 bits (88), Expect(6) = 3e-030
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3 / +3
Query: 445 YCWNLEHCSSNVDTFLK 395
+CWNLEHCS+NV TFLK
Sbjct: 9981 HCWNLEHCSNNVGTFLK 10031
Score = 41.4 bits (84), Expect(6) = 3e-030
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 878 *GYPICRVGSQSIATEWAGGCT 813
* YPIC+VGS+S+A E GGCT
Sbjct: 5662 *SYPICKVGSESMAAECGGGCT 5727
Score = 39.1 bits (79), Expect(8) = 5e-047
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1 / -3
Query: 814 VHPPAHSVAMDCEPTLQIG 870
V PP HS AMD EPTLQIG
Sbjct: 5726 VQPPPHSAAMDSEPTLQIG 5670
Score = 35.9 bits (72), Expect(8) = 5e-047
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1 / -2
Query: 871 YPHHQFPPPEAVNNIPRSAATGENNFMLGWVL* 969
YPH P + A ENNFMLGWVL*
Sbjct: 5493 YPHQFVPAEANTIQRSTAPAGAENNFMLGWVL* 5395
Score = 35.4 bits (71), Expect(6) = 3e-030
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -2 / +2
Query: 968 QRTHPSMKLFSPVAALLGILLTASGGGNW**GY 870
QRTHPSMKLFS A + + + + G **GY
Sbjct: 5396 QRTHPSMKLFSAPAGAVLL*IVFASAGTN**GY 5494
Score = 32.7 bits (65), Expect(8) = 5e-047
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / -2
Query: 670 ERHLGEMNRQLKHKL 714
ER LGE+NRQLKHK+
Sbjct: 5955 ERQLGEINRQLKHKV 5911
Score = 29.9 bits (59), Expect(8) = 5e-047
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 626 RRKL*WSKWKSFAERSV 676
RR *W+KW++FAER +
Sbjct: 6308 RRN**WNKWRNFAERYI 6258
Score = 26.7 bits (52), Expect(6) = 3e-030
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3 / +3
Query: 676 DAPFCEALPLAPS*LAS 626
+ PFCE PL PS +AS
Sbjct: 6258 NVPFCEVPPLVPSSVAS 6308
Score = 26.7 bits (52), Expect(8) = 5e-047
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2 / -1
Query: 731 ATTQPCSMPPAGQLP 775
ATT+PCS PP + P
Sbjct: 5794 ATTEPCSKPPGLRAP 5750
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 139 bits (298), Expect(4) = 5e-046
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSA
Sbjct: 7086150 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 7086329
Query: 382 G 384
G
Sbjct: 7086330 G 7086332
Score = 108 bits (230), Expect(2) = 1e-023
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRGRVELK+IEN NRQVTFSKRR GLLKKA EL++LCDA++ +I+FSG GK+YE+ S
Sbjct: 8871289 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSS 8871465
Score = 102 bits (217), Expect(2) = 1e-021
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +1 / +1
Query: 169 ASSDLGSEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS 348
A+ L S + MGRG++ ++RI+N +RQVTFSKRRNG+ KKA EL++LCDAEV L+IFS
Sbjct: 891652 ATIQLRSIDRSMGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFS 891831
Query: 349 GRGKLYEFGS 378
G+LYE+ S
Sbjct: 891832 STGRLYEYAS 891861
Score = 72.5 bits (152), Expect(4) = 5e-046
Identities = 30/34 (88%), Positives = 33/34 (97%)
Frame = +1 / +2
Query: 526 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRK 627
RH+LGEDLGPLS+KELQQLEKQLE +LSQARQRK
Sbjct: 7088903 RHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRK 7089004
Score = 43.7 bits (89), Expect(2) = 1e-023
Identities = 17/53 (32%), Positives = 35/53 (66%)
Frame = +1 / +2
Query: 475 QEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQ 633
QEM++++ + L+ R +G+DL L+++++ LE+Q+E +L + R RK +
Sbjct: 8871998 QEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKVK 8872156
Score = 42.8 bits (87), Expect(2) = 1e-021
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1 / +1
Query: 526 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVM 639
R L+G+DL L VKELQ LE QLE ++ R +K ++
Sbjct: 898846 RQLMGQDLSGLGVKELQTLENQLEMSIRCIRTKKVNLL 898959
Score = 42.3 bits (86), Expect(4) = 5e-046
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1 / +1
Query: 466 SWYQEMSKLRAKFEALQRTQRH 531
SWYQEMS+L+ K E LQR+QR+
Sbjct: 7088758 SWYQEMSRLKTKLECLQRSQRY 7088823
Score = 40.0 bits (81), Expect(4) = 5e-046
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 385 VTKTLERYQHCCYNAQDSNNS 447
+ KTLE+Y CCYNAQ SN++
Sbjct: 7088271 INKTLEKYNSCCYNAQGSNSA 7088333
>dbj|AK072683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140K24, full
insert sequence
Length = 2563
Score = 118 bits (252), Expect(2) = 1e-045
Identities = 48/59 (81%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ +
Sbjct: 183 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYAT 359
Score = 95.5 bits (202), Expect(2) = 1e-045
Identities = 39/83 (46%), Positives = 58/83 (69%)
Frame = +1 / +2
Query: 466 SWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMME 645
+W E KL+AK E +Q+ +HL+GEDL L++KELQQLE+QLE +L RK+ +M+E
Sbjct: 1784 NWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLE 1963
Query: 646 QVEELRRTERHLGEMNRQLKHKL 714
+ EL++ ER L E N+ L+ +L
Sbjct: 1964 SISELQKKERSLQEENKALQKEL 2032
>gb|AU225854.1|AU225854 AU225854 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0886, mRNA sequence
Length = 502
Score = 106 bits (226), Expect(3) = 1e-043
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = +1 / +1
Query: 232 IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
IENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF S
Sbjct: 16 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 162
Score = 86.8 bits (183), Expect(3) = 1e-043
Identities = 38/75 (50%), Positives = 54/75 (72%)
Frame = +1 / +1
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+A+ E LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +T+ +++Q+ E
Sbjct: 271 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 450
Query: 658 LRRTERHLGEMNRQL 702
L+R E+ + E NR L
Sbjct: 451 LQRKEQMVSEANRCL 495
Score = 27.2 bits (53), Expect(3) = 1e-043
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 385 VTKTLERYQHCCY 423
+TKTLE+YQ C Y
Sbjct: 172 MTKTLEKYQKCSY 210
>dbj|AK111723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027E19, full
insert sequence
Length = 1071
Score = 181 bits (390), Expect = 1e-043
Identities = 77/169 (45%), Positives = 118/169 (69%)
Frame = +1 / +3
Query: 208 RGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSAGV 387
RG++E+KRIEN NRQVTF KRR+GLLKKAYELSVLCDAEVAL++FS RG+LYE+ + V
Sbjct: 237 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSV 416
Query: 388 TKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVK 567
+T+ERY+ + +++ A +Q + QE +KL+ + LQ + R L+G+++ ++ +
Sbjct: 417 KETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHR 596
Query: 568 ELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
EL+QLE +L+ L + R RK +++ ++E ++R E L N LK K+
Sbjct: 597 ELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKV 743
>dbj|AB232157.1| Oryza sativa (japonica cultivar-group) mRNA for transcription
factor OsMADS58, complete cds
Length = 1181
Score = 181 bits (390), Expect = 1e-043
Identities = 77/169 (45%), Positives = 118/169 (69%)
Frame = +1 / +3
Query: 208 RGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSAGV 387
RG++E+KRIEN NRQVTF KRR+GLLKKAYELSVLCDAEVAL++FS RG+LYE+ + V
Sbjct: 237 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSV 416
Query: 388 TKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVK 567
+T+ERY+ + +++ A +Q + QE +KL+ + LQ + R L+G+++ ++ +
Sbjct: 417 KETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHR 596
Query: 568 ELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
EL+QLE +L+ L + R RK +++ ++E ++R E L N LK K+
Sbjct: 597 ELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKV 743
>gb|CF315263.1|CF315263 HD--04-B23.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-B23, mRNA sequence
Length = 626
Score = 118 bits (253), Expect(3) = 5e-043
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1 / +2
Query: 187 SEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLY 366
+ E MGRG+V LKRIENKI+RQVTF+KRRNGLLKKAYELSVLCDAEVAL+IFS RG+L+
Sbjct: 194 ARERSMGRGKV*LKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLF 373
Query: 367 EFGSA 381
EF ++
Sbjct: 374 EFSTS 388
Score = 68.9 bits (144), Expect(3) = 5e-043
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = +1 / +2
Query: 442 NSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECAL 606
++AL S YQE KL+ + E LQ TQR+LLGEDL PLS++EL+QLE Q+E +L
Sbjct: 455 SAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLEELEQLENQIEISL 619
Score = 30.4 bits (60), Expect(3) = 5e-043
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1 / +2
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSESQ 465
S+ + KTLERY+ C YN SA E++
Sbjct: 386 SSCMYKTLERYRSCNYNLNSCEASAALETE 475
>dbj|AK070425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A03, full
insert sequence
Length = 1214
Score = 118 bits (252), Expect(2) = 2e-042
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +1 / +3
Query: 190 EEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYE 369
E+ MGRGR+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS RG+LYE
Sbjct: 54 EQEDMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 233
Query: 370 FGS 378
+ +
Sbjct: 234 YSN 242
Score = 79.4 bits (167), Expect(2) = 2e-042
Identities = 34/104 (32%), Positives = 61/104 (58%)
Frame = +1 / +3
Query: 412 HCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQ 591
H C + + ++ Q + QE +KLR + + LQ T +HL+G+++ LS+KEL+QLE +
Sbjct: 285 HACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESR 464
Query: 592 LECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAE 723
LE +S+ R RK +++ ++ + + E L N L+ K+ E
Sbjct: 465 LEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAEE 596
>gb|AY332475.1| Oryza sativa (japonica cultivar-group) MADS protein (MAF1) mRNA,
complete cds
Length = 1010
Score = 118 bits (252), Expect(2) = 2e-042
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +1 / +3
Query: 190 EEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYE 369
E+ MGRGR+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS RG+LYE
Sbjct: 27 EQEDMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 206
Query: 370 FGS 378
+ +
Sbjct: 207 YSN 215
Score = 79.4 bits (167), Expect(2) = 2e-042
Identities = 34/104 (32%), Positives = 61/104 (58%)
Frame = +1 / +3
Query: 412 HCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQ 591
H C + + ++ Q + QE +KLR + + LQ T +HL+G+++ LS+KEL+QLE +
Sbjct: 258 HACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESR 437
Query: 592 LECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAE 723
LE +S+ R RK +++ ++ + + E L N L+ K+ E
Sbjct: 438 LEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAEE 569
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 8,467,029,153
Number of Sequences: 438736
Number of extensions: 141781129
Number of successful extensions: 663291
Number of sequences better than 1.0e-020: 316
length of database: 933,473,305
effective HSP length: 61
effective length of database: 906,710,409
effective search space used: 325509036831
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)