TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8228841.2.1
(621 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK066908.1| Oryza sativa (japonica cultivar-group) cDNA... 120 3e-040
gb|CB675343.1|CB675343 OSJNEe11A17.r OSJNEe Oryza sativa (j... 118 5e-040
gb|CF318496.1|CF318496 HD--08-K07.g1 OsHDAC1-overexpressing... 113 7e-040
ref|XM_472853.1| Oryza sativa (japonica cultivar-group), p... 113 9e-040
dbj|AK100820.1| Oryza sativa (japonica cultivar-group) cDNA... 113 9e-040
dbj|AK062776.1| Oryza sativa (japonica cultivar-group) cDNA... 113 9e-040
gb|CV723046.1|CV723046 root--02-F13.g1 Rice root lambda pha... 112 2e-039
dbj|AK070962.1| Oryza sativa (japonica cultivar-group) cDNA... 114 6e-039
ref|XM_472855.1| Oryza sativa (japonica cultivar-group), p... 114 6e-039
gb|CB647183.1|CB647183 OSJNEb10A03.r OSJNEb Oryza sativa (j... 114 6e-039
dbj|AK065793.1| Oryza sativa (japonica cultivar-group) cDNA... 117 2e-038
dbj|AK062029.1| Oryza sativa (japonica cultivar-group) cDNA... 117 2e-038
ref|XM_472851.1| Oryza sativa (japonica cultivar-group), p... 117 2e-038
gb|CB651199.1|CB651199 OSJNEb16B05.r OSJNEb Oryza sativa (j... 117 2e-038
gb|CB672844.1|CB672844 OSJNEe07B16.r OSJNEe Oryza sativa (j... 117 2e-038
ref|XM_472852.1| Oryza sativa (japonica cultivar-group), p... 114 2e-037
gb|CV723024.1|CV723024 root--02-E13.g1 Rice root lambda pha... 113 1e-033
gb|CF276515.1|CF276515 14ETL--01-L03.g1 Rice etiolated leaf... 107 6e-033
ref|NM_190276.1| Oryza sativa (japonica cultivar-group), p... 108 3e-031
emb|AL606591.1|OSJN00030 Oryza sativa (japonica cultivar-gr... 91 6e-031
emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromoso... 91 7e-031
gb|AACV01009971.1| Oryza sativa (japonica cultivar-group) c... 85 3e-030
gb|AACV01009973.1| Oryza sativa (japonica cultivar-group) c... 85 9e-029
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 91 1e-028
gb|AACV01009972.1| Oryza sativa (japonica cultivar-group) c... 86 2e-027
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 86 3e-027
gb|AACV01010847.1| Oryza sativa (japonica cultivar-group) c... 91 1e-026
gb|AC108758.2| Oryza sativa (japonica cultivar-group) chrom... 100 3e-026
gb|AACV01020304.1| Oryza sativa (japonica cultivar-group) c... 100 3e-026
gb|AC138008.1| Oryza sativa (japonica cultivar-group) chrom... 100 6e-026
gb|AC108762.2| Oryza sativa (japonica cultivar-group) chrom... 100 7e-026
gb|C98907.1|C98907 C98907 Rice panicle at flowering stage O... 108 3e-025
gb|CF309590.1|CF309590 ABF--03-N08.g1 ABF3-overexpressing t... 117 1e-024
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 91 2e-024
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 100 5e-024
gb|AY129294.1| Oryza sativa (japonica cultivar-group) beta-... 77 1e-023
dbj|AK119546.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-023
gb|CB673496.1|CB673496 OSJNEe08A17.r OSJNEe Oryza sativa (j... 77 1e-023
gb|CB642724.1|CB642724 OSJNEb03A24.r OSJNEb Oryza sativa (j... 77 1e-023
gb|AACV01013747.1| Oryza sativa (japonica cultivar-group) c... 83 1e-023
dbj|AK069177.1| Oryza sativa (japonica cultivar-group) cDNA... 84 2e-023
ref|NM_193731.1| Oryza sativa (japonica cultivar-group), p... 84 2e-023
dbj|AK060988.1| Oryza sativa (japonica cultivar-group) cDNA... 84 2e-023
gb|CB642882.1|CB642882 OSJNEb03E17.r OSJNEb Oryza sativa (j... 76 2e-023
dbj|AP003543.3| Oryza sativa (japonica cultivar-group) geno... 83 4e-023
gb|CA999014.1|CA999014 S234M_B11 Rice cold stress germinati... 111 1e-022
gb|AACV01002847.1| Oryza sativa (japonica cultivar-group) c... 92 1e-022
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-022
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 84 1e-022
dbj|AP003435.2| Oryza sativa (japonica cultivar-group) geno... 84 1e-022
dbj|AP003217.3| Oryza sativa (japonica cultivar-group) geno... 84 1e-022
gb|AACV01001283.1| Oryza sativa (japonica cultivar-group) c... 84 1e-022
dbj|AP003349.4| Oryza sativa (japonica cultivar-group) geno... 92 2e-022
dbj|AP003418.2| Oryza sativa (japonica cultivar-group) geno... 92 2e-022
dbj|AP005184.5| Oryza sativa (japonica cultivar-group) geno... 87 2e-022
dbj|AP005182.5| Oryza sativa (japonica cultivar-group) geno... 87 2e-022
dbj|AP003821.1| Oryza sativa (japonica cultivar-group) chro... 87 2e-022
gb|AACV01016950.1| Oryza sativa (japonica cultivar-group) c... 87 2e-022
gb|CA999016.1|CA999016 S234M_B12 Rice cold stress germinati... 109 3e-022
dbj|AK068499.1| Oryza sativa (japonica cultivar-group) cDNA... 87 3e-022
gb|CB660688.1|CB660688 OSJNEd02K23.r OSJNEd Oryza sativa (j... 87 3e-022
gb|CB661845.1|CB661845 OSJNEd05D15.r OSJNEd Oryza sativa (j... 87 3e-022
gb|CB647043.1|CB647043 OSJNEb09M19.r OSJNEb Oryza sativa (j... 87 3e-022
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 83 5e-022
gb|CH401212.1| Oryza sativa (japonica cultivar-group) chrom... 83 6e-022
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 81 8e-022
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 81 8e-022
gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 ... 81 9e-022
gb|AC091670.7| Oryza sativa (japonica cultivar-group) chrom... 81 9e-022
gb|AACV01007734.1| Oryza sativa (japonica cultivar-group) c... 81 9e-022
gb|CB670853.1|CB670853 OSJNEe04C10.r OSJNEe Oryza sativa (j... 85 9e-022
gb|AACV01007733.1| Oryza sativa (japonica cultivar-group) c... 83 2e-021
dbj|AK120790.1| Oryza sativa (japonica cultivar-group) cDNA... 81 2e-021
ref|XM_469438.1| Oryza sativa (japonica cultivar-group), mRNA 81 2e-021
dbj|AK105850.1| Oryza sativa (japonica cultivar-group) cDNA... 81 2e-021
dbj|AK059517.1| Oryza sativa (japonica cultivar-group) cDNA... 81 2e-021
gb|CA998261.1|CA998261 S234E_C12 Rice cold stress germinati... 81 2e-021
gb|CF304479.1|CF304479 ABF1--05-B14.g1 ABF3-overexpressing ... 81 2e-021
gb|CA998259.1|CA998259 S234E_C10 Rice cold stress germinati... 81 2e-021
gb|CV721914.1|CV721914 YBH--05-M06.b1 Rice before heading y... 105 3e-021
gb|AACV01006096.1| Oryza sativa (japonica cultivar-group) c... 77 5e-021
>dbj|AK066908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092D04, full
insert sequence
Length = 3403
Score = 120 bits (257), Expect(2) = 3e-040
Identities = 44/88 (50%), Positives = 65/88 (73%)
Frame = +3 / +2
Query: 123 DTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTER 302
+ +K +P+K+ALND+ R++Y +H+ L++A+ GA+V+G+F WSLLDNFEW+ GYT R
Sbjct: 2951 EVNNKTMPLKEALNDNTRIEYYHKHLLALRNAMRDGANVKGYFAWSLLDNFEWADGYTLR 3130
Query: 303 YGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
+G+ +VD +G KR K SA W KKF R
Sbjct: 3131 FGLNFVDYDDGMKRHPKNSAHWFKKFLR 3214
Score = 68.9 bits (144), Expect(2) = 3e-040
Identities = 21/42 (50%), Positives = 34/42 (80%)
Frame = +3 / +2
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
W+++YP GL+++L++IK YGNP ++ITENG+ +V+ K PL
Sbjct: 2852 WLHIYPQGLRELLLYIKENYGNPTIFITENGVDEVNNKTMPL 2977
>gb|CB675343.1|CB675343 OSJNEe11A17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe11A17 3', mRNA sequence
Length = 797
Score = 118 bits (252), Expect(2) = 5e-040
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +3 / -1
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
+KPLP+++AL D R+DY +H+ L AI GA+V+G+F WSLLDNFEWS GYT R+GI
Sbjct: 524 NKPLPLQEALKDDTRIDYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGI 345
Query: 312 VYVDRGNGCKRRMKRSAKWLKKF 380
+VD +G KR K SA W K+F
Sbjct: 344 NFVDYNDGAKRYPKMSAHWFKEF 276
Score = 70.3 bits (147), Expect(2) = 5e-040
Identities = 20/44 (45%), Positives = 34/44 (77%)
Frame = +3 / -1
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
+PW+Y+YP G +++++++K YGNP +YITENG+ + + K PL
Sbjct: 638 SPWLYIYPQGFRELVLYVKENYGNPTIYITENGVDEFNNKPLPL 507
>gb|CF318496.1|CF318496 HD--08-K07.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--08-K07, mRNA sequence
Length = 556
Score = 113 bits (242), Expect(2) = 7e-040
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3 / -3
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
+K LP+++AL D R++Y +H+ L AI GA+V+G+F WSLLDNFEWS GYT R+GI
Sbjct: 401 NKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGI 222
Query: 312 VYVDRGNGCKRRMKRSAKWLKKF 380
+VD +G KR K SA W KKF
Sbjct: 221 NFVDYNDGRKRYPKNSAHWFKKF 153
Score = 74.4 bits (156), Expect(2) = 7e-040
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = +3 / -3
Query: 6 MGNPWIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
+ +PW+Y+YP G +D+L+++K YGNP VYITENG+ + + K PL
Sbjct: 521 VASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPL 384
>ref|XM_472853.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1533
Score = 113 bits (242), Expect(2) = 9e-040
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3 / +1
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
+K LP+++AL D R++Y +H+ L AI GA+V+G+F WSLLDNFEWS GYT R+GI
Sbjct: 1273 NKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGI 1452
Query: 312 VYVDRGNGCKRRMKRSAKWLKKF 380
+VD +G KR K SA W KKF
Sbjct: 1453 NFVDYNDGRKRYPKNSAHWFKKF 1521
Score = 73.9 bits (155), Expect(2) = 9e-040
Identities = 23/44 (52%), Positives = 34/44 (77%)
Frame = +3 / +1
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
+PW+Y+YP G +D+L+++K YGNP VYITENG+ + + K PL
Sbjct: 1159 SPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPL 1290
>dbj|AK100820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122G03, full
insert sequence
Length = 1348
Score = 113 bits (242), Expect(2) = 9e-040
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3 / +3
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
+K LP+++AL D R++Y +H+ L AI GA+V+G+F WSLLDNFEWS GYT R+GI
Sbjct: 966 NKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGI 1145
Query: 312 VYVDRGNGCKRRMKRSAKWLKKF 380
+VD +G KR K SA W KKF
Sbjct: 1146 NFVDYNDGRKRYPKNSAHWFKKF 1214
Score = 73.9 bits (155), Expect(2) = 9e-040
Identities = 23/44 (52%), Positives = 34/44 (77%)
Frame = +3 / +3
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
+PW+Y+YP G +D+L+++K YGNP VYITENG+ + + K PL
Sbjct: 852 SPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPL 983
>dbj|AK062776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-A09, full
insert sequence
Length = 735
Score = 113 bits (242), Expect(2) = 9e-040
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3 / +2
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
+K LP+++AL D R++Y +H+ L AI GA+V+G+F WSLLDNFEWS GYT R+GI
Sbjct: 410 NKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGI 589
Query: 312 VYVDRGNGCKRRMKRSAKWLKKF 380
+VD +G KR K SA W KKF
Sbjct: 590 NFVDYNDGRKRYPKNSAHWFKKF 658
Score = 73.9 bits (155), Expect(2) = 9e-040
Identities = 23/44 (52%), Positives = 34/44 (77%)
Frame = +3 / +2
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
+PW+Y+YP G +D+L+++K YGNP VYITENG+ + + K PL
Sbjct: 296 SPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPL 427
>gb|CV723046.1|CV723046 root--02-F13.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--02-F13, mRNA sequence
Length = 452
Score = 112 bits (240), Expect(2) = 2e-039
Identities = 45/83 (54%), Positives = 58/83 (69%)
Frame = +3 / -3
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
+K LP+++AL D R++Y +H+ L AI GA V+G+F WSLLDNFEWS GYT R+GI
Sbjct: 288 NKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGAHVKGYFAWSLLDNFEWSNGYTVRFGI 109
Query: 312 VYVDRGNGCKRRMKRSAKWLKKF 380
+VD +G KR K SA W KKF
Sbjct: 108 NFVDYNDGRKRYPKNSAHWFKKF 40
Score = 73.9 bits (155), Expect(2) = 2e-039
Identities = 23/44 (52%), Positives = 34/44 (77%)
Frame = +3 / -3
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
+PW+Y+YP G +D+L+++K YGNP VYITENG+ + + K PL
Sbjct: 402 SPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPL 271
>dbj|AK070962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066D17, full
insert sequence
Length = 1853
Score = 114 bits (244), Expect(2) = 6e-039
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3 / +1
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
+K LP+++AL D R+DY +H+ L AI GA+V+G+F WSLLDNFEWS GYT R+GI
Sbjct: 1285 NKTLPLQEALKDDTRIDYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGI 1464
Query: 312 VYVDRGNGCKRRMKRSAKWLKKF 380
+VD +G KR K SA W K+F
Sbjct: 1465 NFVDYNDGAKRYPKMSAHWFKEF 1533
Score = 70.3 bits (147), Expect(2) = 6e-039
Identities = 20/44 (45%), Positives = 34/44 (77%)
Frame = +3 / +1
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
+PW+Y+YP G +++++++K YGNP +YITENG+ + + K PL
Sbjct: 1171 SPWLYIYPQGFRELVLYVKENYGNPTIYITENGVDEFNNKTLPL 1302
>ref|XM_472855.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1521
Score = 114 bits (244), Expect(2) = 6e-039
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3 / +1
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
+K LP+++AL D R+DY +H+ L AI GA+V+G+F WSLLDNFEWS GYT R+GI
Sbjct: 1261 NKTLPLQEALKDDTRIDYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGI 1440
Query: 312 VYVDRGNGCKRRMKRSAKWLKKF 380
+VD +G KR K SA W K+F
Sbjct: 1441 NFVDYNDGAKRYPKMSAHWFKEF 1509
Score = 70.3 bits (147), Expect(2) = 6e-039
Identities = 20/44 (45%), Positives = 34/44 (77%)
Frame = +3 / +1
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
+PW+Y+YP G +++++++K YGNP +YITENG+ + + K PL
Sbjct: 1147 SPWLYIYPQGFRELVLYVKENYGNPTIYITENGVDEFNNKTLPL 1278
>gb|CB647183.1|CB647183 OSJNEb10A03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10A03 3', mRNA sequence
Length = 774
Score = 114 bits (244), Expect(2) = 6e-039
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3 / -1
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
+K LP+++AL D R+DY +H+ L AI GA+V+G+F WSLLDNFEWS GYT R+GI
Sbjct: 375 NKTLPLQEALKDDTRIDYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGI 196
Query: 312 VYVDRGNGCKRRMKRSAKWLKKF 380
+VD +G KR K SA W K+F
Sbjct: 195 NFVDYNDGAKRYPKMSAHWFKEF 127
Score = 70.3 bits (147), Expect(2) = 6e-039
Identities = 20/44 (45%), Positives = 34/44 (77%)
Frame = +3 / -1
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
+PW+Y+YP G +++++++K YGNP +YITENG+ + + K PL
Sbjct: 489 SPWLYIYPQGFRELVLYVKENYGNPTIYITENGVDEFNNKTLPL 358
>dbj|AK065793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041M21, full
insert sequence
Length = 1976
Score = 117 bits (250), Expect(2) = 2e-038
Identities = 45/88 (51%), Positives = 62/88 (70%)
Frame = +3 / +2
Query: 123 DTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTER 302
+ +K + +K+AL D +R++Y +H+ L A+ GA+V+G+F WSLLDNFEWS GYT R
Sbjct: 1436 EINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWSEGYTVR 1615
Query: 303 YGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
+GI +VD NG KR K SA+W KKF R
Sbjct: 1616 FGINFVDYDNGMKRYPKNSARWFKKFLR 1699
Score = 65.7 bits (137), Expect(2) = 2e-038
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = +3 / +2
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTK 131
W Y+YP GL+++L+ IK YGNP +YITENG+ +++ K
Sbjct: 1337 WFYIYPEGLRELLLHIKENYGNPTIYITENGVDEINNK 1450
>dbj|AK062029.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G08, full
insert sequence
Length = 1777
Score = 117 bits (250), Expect(2) = 2e-038
Identities = 45/88 (51%), Positives = 62/88 (70%)
Frame = +3 / +3
Query: 123 DTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTER 302
+ +K + +K+AL D +R++Y +H+ L A+ GA+V+G+F WSLLDNFEWS GYT R
Sbjct: 1389 EINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWSEGYTVR 1568
Query: 303 YGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
+GI +VD NG KR K SA+W KKF R
Sbjct: 1569 FGINFVDYDNGMKRYPKNSARWFKKFLR 1652
Score = 65.7 bits (137), Expect(2) = 2e-038
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = +3 / +3
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTK 131
W Y+YP GL+++L+ IK YGNP +YITENG+ +++ K
Sbjct: 1290 WFYIYPEGLRELLLHIKENYGNPTIYITENGVDEINNK 1403
>ref|XM_472851.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1602
Score = 117 bits (250), Expect(2) = 2e-038
Identities = 45/88 (51%), Positives = 62/88 (70%)
Frame = +3 / +1
Query: 123 DTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTER 302
+ +K + +K+AL D +R++Y +H+ L A+ GA+V+G+F WSLLDNFEWS GYT R
Sbjct: 1333 EINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWSEGYTVR 1512
Query: 303 YGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
+GI +VD NG KR K SA+W KKF R
Sbjct: 1513 FGINFVDYDNGMKRYPKNSARWFKKFLR 1596
Score = 65.7 bits (137), Expect(2) = 2e-038
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = +3 / +1
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTK 131
W Y+YP GL+++L+ IK YGNP +YITENG+ +++ K
Sbjct: 1234 WFYIYPEGLRELLLHIKENYGNPTIYITENGVDEINNK 1347
>gb|CB651199.1|CB651199 OSJNEb16B05.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16B05 3', mRNA sequence
Length = 780
Score = 117 bits (250), Expect(2) = 2e-038
Identities = 45/88 (51%), Positives = 62/88 (70%)
Frame = +3 / -3
Query: 123 DTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTER 302
+ +K + +K+AL D +R++Y +H+ L A+ GA+V+G+F WSLLDNFEWS GYT R
Sbjct: 595 EINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWSEGYTVR 416
Query: 303 YGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
+GI +VD NG KR K SA+W KKF R
Sbjct: 415 FGINFVDYDNGMKRYPKNSARWFKKFLR 332
Score = 65.7 bits (137), Expect(2) = 2e-038
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = +3 / -3
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTK 131
W Y+YP GL+++L+ IK YGNP +YITENG+ +++ K
Sbjct: 694 WFYIYPEGLRELLLHIKENYGNPTIYITENGVDEINNK 581
>gb|CB672844.1|CB672844 OSJNEe07B16.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07B16 3', mRNA sequence
Length = 692
Score = 117 bits (250), Expect(2) = 2e-038
Identities = 45/88 (51%), Positives = 62/88 (70%)
Frame = +3 / -2
Query: 123 DTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTER 302
+ +K + +K+AL D +R++Y +H+ L A+ GA+V+G+F WSLLDNFEWS GYT R
Sbjct: 568 EINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWSEGYTVR 389
Query: 303 YGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
+GI +VD NG KR K SA+W KKF R
Sbjct: 388 FGINFVDYDNGMKRYPKNSARWFKKFLR 305
Score = 65.7 bits (137), Expect(2) = 2e-038
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = +3 / -2
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTK 131
W Y+YP GL+++L+ IK YGNP +YITENG+ +++ K
Sbjct: 667 WFYIYPEGLRELLLHIKENYGNPTIYITENGVDEINNK 554
>ref|XM_472852.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1590
Score = 114 bits (243), Expect(2) = 2e-037
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = +3 / +1
Query: 123 DTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTER 302
+ +K +P+++AL D R++Y +H+ L A+ GA+V+G+F WSLLDNFEW+ GYT R
Sbjct: 1264 EVNNKTMPLEEALKDDTRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWAEGYTVR 1443
Query: 303 YGIVYVDRGNGCKRRMKRSAKWLKKF 380
+GI +VD +G KR K SA+W KKF
Sbjct: 1444 FGINFVDYDDGMKRYPKNSARWFKKF 1521
Score = 65.7 bits (137), Expect(2) = 2e-037
Identities = 20/42 (47%), Positives = 32/42 (76%)
Frame = +3 / +1
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
W ++YP G+ ++L+++K YGNP +YITENG+ +V+ K PL
Sbjct: 1165 WFHIYPEGICEMLLYVKENYGNPTIYITENGVDEVNNKTMPL 1290
>gb|CV723024.1|CV723024 root--02-E13.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--02-E13, mRNA sequence
Length = 452
Score = 113 bits (242), Expect(2) = 1e-033
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3 / -3
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
+K LP+++AL D R++Y +H+ L AI GA+V+G+F WSLLDNFEWS GYT R+GI
Sbjct: 288 NKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGI 109
Query: 312 VYVDRGNGCKRRMKRSAKWLKKF 380
+VD +G KR K SA W KKF
Sbjct: 108 NFVDYNDGRKRYPKNSAHWFKKF 40
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3 / -3
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
+P + + P G + +++K YGNP VYITENG+ + + K PL
Sbjct: 402 SPXLXVXPQGFRXXXLYVKENYGNPTVYITENGVDEFNNKTLPL 271
>gb|CF276515.1|CF276515 14ETL--01-L03.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-L03, mRNA sequence
Length = 455
Score = 107 bits (228), Expect(2) = 6e-033
Identities = 42/83 (50%), Positives = 58/83 (69%)
Frame = +3 / -1
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
+K LP+++AL D R++Y +H+ L AI GA+V+G+F WSLLDNFEWS GYT R+GI
Sbjct: 362 NKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGI 183
Query: 312 VYVDRGNGCKRRMKRSAKWLKKF 380
+V+ +G K+ K A W KKF
Sbjct: 182 NFVNYNDGRKKYPKNFAHWFKKF 114
Score = 57.4 bits (119), Expect(2) = 6e-033
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +3 / -1
Query: 33 PNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
P G +D+L+++K YGNP VYITENG+ + + K PL
Sbjct: 455 PQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPL 345
>ref|NM_190276.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1566
Score = 108 bits (231), Expect(2) = 3e-031
Identities = 42/92 (45%), Positives = 58/92 (63%)
Frame = +3 / +1
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
D+ + LND R+ Y + +++ + AI GADVRG+F WS LDNFEW+ GYT+R+GI
Sbjct: 1276 DQSATLDQVLNDTTRVGYFKGYLASVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGI 1455
Query: 312 VYVDRGNGCKRRMKRSAKWLKKFNRAAHTKKK 407
VYVD NG R K SA+W +F + + K
Sbjct: 1456 VYVDYKNGLSRHPKASARWFSRFLKGDDAENK 1551
Score = 50.6 bits (104), Expect(2) = 3e-031
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +3 / +1
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGDVDTKDKPL 143
W+++ P GL+ +L + +YGNP +Y+TENG+ + D + L
Sbjct: 1168 WLFIVPWGLRKLLNYAAKRYGNPVIYVTENGMDEEDDQSATL 1293
>emb|AL606591.1|OSJN00030 Oryza sativa (japonica cultivar-group) chromosome 4 clone OSJNBa0053D18,
*** SEQUENCING IN PROGRESS ***
Length = 156939
Score = 91.3 bits (193), Expect(3) = 1e-029
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / +2
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
GA+V+G+F WSLLDNFEWS GYT R+GI +VD NG KR K SA+W KKF R
Sbjct: 131657 GANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFLR 131815
Score = 86.8 bits (183), Expect(2) = 3e-023
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +3 / +3
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
GA+V+G+F WSLLDNFEW+ GYT R+GI +VD +G KR K SA+W KKF
Sbjct: 124440 GANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKF 124592
Score = 85.4 bits (180), Expect(3) = 6e-031
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +3 / +1
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
GA+V+G+F WSLLDNFEW+ GYT R+G+ +VD +G KR K SA W KKF R
Sbjct: 144217 GANVKGYFAWSLLDNFEWADGYTLRFGLNFVDYDDGMKRHPKNSAHWFKKFLR 144375
Score = 66.1 bits (138), Expect(3) = 6e-031
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +3 / +2
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
+PW+Y+YP G +D+L+++K YGNP VYITENG
Sbjct: 111716 SPWLYVYPQGFRDLLLYVKENYGNPTVYITENG 111814
Score = 62.5 bits (130), Expect(3) = 1e-029
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +3 / +2
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
+PW+Y+YP G +++++++K YGNP +YITENG
Sbjct: 96602 SPWLYIYPQGFRELVLYVKENYGNPTIYITENG 96700
Score = 55.1 bits (114), Expect(2) = 3e-023
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +3 / +3
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
W ++YP G+ ++L+++K YGNP +YITENG
Sbjct: 123939 WFHIYPEGICEMLLYVKENYGNPTIYITENG 124031
Score = 42.3 bits (86), Expect(3) = 6e-031
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3 / +3
Query: 90 VYITENGIGDVDTKDKPLPIKDALNDHVRLDYLQRHISVLKDAI 221
+ T G + +K +P+K+ALND+ R++Y +H+ L++A+
Sbjct: 143994 ILCTRTSQGVDEVNNKTMPLKEALNDNTRIEYYHKHLLALRNAM 144125
Score = 35.4 bits (71), Expect(3) = 1e-029
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3 / +3
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAI 221
+K LP+++AL D R+DY +H+ L AI
Sbjct: 96945 NKTLPLQEALKDDTRIDYYHKHLLSLLSAI 97034
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21,
complete sequence
Length = 160155
Score = 91.3 bits (193), Expect(3) = 1e-029
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / -3
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
GA+V+G+F WSLLDNFEWS GYT R+GI +VD NG KR K SA+W KKF R
Sbjct: 24655 GANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFLR 24497
Score = 86.8 bits (183), Expect(2) = 3e-023
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +3 / -1
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
GA+V+G+F WSLLDNFEW+ GYT R+GI +VD +G KR K SA+W KKF
Sbjct: 31872 GANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKF 31720
Score = 85.4 bits (180), Expect(3) = 7e-031
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +3 / -2
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
GA+V+G+F WSLLDNFEW+ GYT R+G+ +VD +G KR K SA W KKF R
Sbjct: 12095 GANVKGYFAWSLLDNFEWADGYTLRFGLNFVDYDDGMKRHPKNSAHWFKKFLR 11937
Score = 66.1 bits (138), Expect(3) = 7e-031
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +3 / -3
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
+PW+Y+YP G +D+L+++K YGNP VYITENG
Sbjct: 44596 SPWLYVYPQGFRDLLLYVKENYGNPTVYITENG 44498
Score = 62.5 bits (130), Expect(3) = 1e-029
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +3 / -3
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
+PW+Y+YP G +++++++K YGNP +YITENG
Sbjct: 59710 SPWLYIYPQGFRELVLYVKENYGNPTIYITENG 59612
Score = 55.1 bits (114), Expect(2) = 3e-023
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +3 / -1
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
W ++YP G+ ++L+++K YGNP +YITENG
Sbjct: 32373 WFHIYPEGICEMLLYVKENYGNPTIYITENG 32281
Score = 42.3 bits (86), Expect(3) = 7e-031
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3 / -1
Query: 90 VYITENGIGDVDTKDKPLPIKDALNDHVRLDYLQRHISVLKDAI 221
+ T G + +K +P+K+ALND+ R++Y +H+ L++A+
Sbjct: 12318 ILCTRTSQGVDEVNNKTMPLKEALNDNTRIEYYHKHLLALRNAM 12187
Score = 35.4 bits (71), Expect(3) = 1e-029
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3 / -1
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAI 221
+K LP+++AL D R+DY +H+ L AI
Sbjct: 59367 NKTLPLQEALKDDTRIDYYHKHLLSLLSAI 59278
>gb|AACV01009971.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009971, whole
genome shotgun sequence
Length = 22179
Score = 85.4 bits (180), Expect(3) = 3e-030
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +3 / +1
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
GA+V+G+F WSLLDNFEW+ GYT R+G+ +VD +G KR K SA W KKF R
Sbjct: 4168 GANVKGYFAWSLLDNFEWADGYTLRFGLNFVDYDDGMKRHPKNSAHWFKKFLR 4326
Score = 58.3 bits (121), Expect(3) = 3e-030
Identities = 17/31 (54%), Positives = 27/31 (87%)
Frame = +3 / +1
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
W+++YP GL+++L++IK YGNP ++ITENG
Sbjct: 3634 WLHIYPQGLRELLLYIKENYGNPTIFITENG 3726
Score = 42.3 bits (86), Expect(3) = 3e-030
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3 / +3
Query: 90 VYITENGIGDVDTKDKPLPIKDALNDHVRLDYLQRHISVLKDAI 221
+ T G + +K +P+K+ALND+ R++Y +H+ L++A+
Sbjct: 3945 ILCTRTSQGVDEVNNKTMPLKEALNDNTRIEYYHKHLLALRNAM 4076
>gb|AACV01009973.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009973, whole
genome shotgun sequence
Length = 43309
Score = 84.9 bits (179), Expect(3) = 9e-029
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +3 / -2
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
GA+V+G+F WSLLDNFEWS GYT R+GI +VD +G KR K SA W K+F
Sbjct: 6495 GANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGAKRYPKMSAHWFKEF 6343
Score = 62.5 bits (130), Expect(3) = 9e-029
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +3 / -1
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
+PW+Y+YP G +++++++K YGNP +YITENG
Sbjct: 7024 SPWLYIYPQGFRELVLYVKENYGNPTIYITENG 6926
Score = 35.4 bits (71), Expect(3) = 9e-029
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3 / -2
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAI 221
+K LP+++AL D R+DY +H+ L AI
Sbjct: 6681 NKTLPLQEALKDDTRIDYYHKHLLSLLSAI 6592
>ref|NT_079863.2| Oryza sativa (japonica cultivar-group)
Length = 2656602
Score = 91.3 bits (193), Expect(3) = 3e-027
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / -1
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
GA+V+G+F WSLLDNFEWS GYT R+GI +VD NG KR K SA+W KKF R
Sbjct: 1307667 GANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFLR 1307509
Score = 86.8 bits (183), Expect(2) = 4e-022
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +3 / -2
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
GA+V+G+F WSLLDNFEW+ GYT R+GI +VD +G KR K SA+W KKF
Sbjct: 1314884 GANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKF 1314732
Score = 85.4 bits (180), Expect(3) = 1e-028
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +3 / -3
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
GA+V+G+F WSLLDNFEW+ GYT R+G+ +VD +G KR K SA W KKF R
Sbjct: 1295107 GANVKGYFAWSLLDNFEWADGYTLRFGLNFVDYDDGMKRHPKNSAHWFKKFLR 1294949
Score = 66.1 bits (138), Expect(3) = 1e-028
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +3 / -1
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
+PW+Y+YP G +D+L+++K YGNP VYITENG
Sbjct: 1327608 SPWLYVYPQGFRDLLLYVKENYGNPTVYITENG 1327510
Score = 62.5 bits (130), Expect(3) = 3e-027
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +3 / -1
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
+PW+Y+YP G +++++++K YGNP +YITENG
Sbjct: 1342722 SPWLYIYPQGFRELVLYVKENYGNPTIYITENG 1342624
Score = 55.1 bits (114), Expect(2) = 4e-022
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +3 / -2
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
W ++YP G+ ++L+++K YGNP +YITENG
Sbjct: 1315385 WFHIYPEGICEMLLYVKENYGNPTIYITENG 1315293
Score = 42.3 bits (86), Expect(3) = 1e-028
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3 / -2
Query: 90 VYITENGIGDVDTKDKPLPIKDALNDHVRLDYLQRHISVLKDAI 221
+ T G + +K +P+K+ALND+ R++Y +H+ L++A+
Sbjct: 1295330 ILCTRTSQGVDEVNNKTMPLKEALNDNTRIEYYHKHLLALRNAM 1295199
Score = 35.4 bits (71), Expect(3) = 3e-027
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3 / -2
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAI 221
+K LP+++AL D R+DY +H+ L AI
Sbjct: 1342379 NKTLPLQEALKDDTRIDYYHKHLLSLLSAI 1342290
>gb|AACV01009972.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009972, whole
genome shotgun sequence
Length = 12357
Score = 85.8 bits (181), Expect(2) = 2e-027
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = +3 / -3
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
GA+V+G+F WSLLDNFEWS GYT R+GI +VD +G KR K SA W KKF
Sbjct: 4162 GANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKF 4010
Score = 66.1 bits (138), Expect(2) = 2e-027
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +3 / -3
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
+PW+Y+YP G +D+L+++K YGNP VYITENG
Sbjct: 4627 SPWLYVYPQGFRDLLLYVKENYGNPTVYITENG 4529
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 85.8 bits (181), Expect(3) = 3e-024
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = +3 / -2
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
GA+V+G+F WSLLDNFEWS GYT R+GI +VD +G KR K SA W KKF
Sbjct: 1615541 GANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKF 1615389
Score = 85.4 bits (180), Expect(3) = 3e-027
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +3 / -1
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
GA+V+G+F WSLLDNFEW+ GYT R+G+ +VD +G KR K SA W KKF R
Sbjct: 1597212 GANVKGYFAWSLLDNFEWADGYTLRFGLNFVDYDDGMKRHPKNSAHWFKKFLR 1597054
Score = 66.1 bits (138), Expect(3) = 3e-027
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +3 / -2
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
+PW+Y+YP G +D+L+++K YGNP VYITENG
Sbjct: 1616006 SPWLYVYPQGFRDLLLYVKENYGNPTVYITENG 1615908
Score = 62.5 bits (130), Expect(3) = 3e-024
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +3 / -3
Query: 12 NPWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
+PW+Y+YP G +++++++K YGNP +YITENG
Sbjct: 1630810 SPWLYIYPQGFRELVLYVKENYGNPTIYITENG 1630712
Score = 42.3 bits (86), Expect(3) = 3e-027
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3 / -3
Query: 90 VYITENGIGDVDTKDKPLPIKDALNDHVRLDYLQRHISVLKDAI 221
+ T G + +K +P+K+ALND+ R++Y +H+ L++A+
Sbjct: 1597435 ILCTRTSQGVDEVNNKTMPLKEALNDNTRIEYYHKHLLALRNAM 1597304
Score = 35.4 bits (71), Expect(3) = 3e-024
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3 / -1
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAI 221
+K LP+++AL D R+DY +H+ L AI
Sbjct: 1630467 NKTLPLQEALKDDTRIDYYHKHLLSLLSAI 1630378
>gb|AACV01010847.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg010847, whole
genome shotgun sequence
Length = 28761
Score = 91.3 bits (193), Expect(2) = 1e-026
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / -1
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
GA+V+G+F WSLLDNFEWS GYT R+GI +VD NG KR K SA+W KKF R
Sbjct: 7572 GANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFLR 7414
Score = 86.8 bits (183), Expect(2) = 5e-024
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +3 / -2
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
GA+V+G+F WSLLDNFEW+ GYT R+GI +VD +G KR K SA+W KKF
Sbjct: 14789 GANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKF 14637
Score = 59.7 bits (124), Expect(2) = 1e-026
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +3 / -3
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
W Y+YP GL+++L+ IK YGNP +YITENG
Sbjct: 8089 WFYIYPEGLRELLLHIKENYGNPTIYITENG 7997
Score = 55.1 bits (114), Expect(2) = 5e-024
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +3 / -2
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
W ++YP G+ ++L+++K YGNP +YITENG
Sbjct: 15290 WFHIYPEGICEMLLYVKENYGNPTIYITENG 15198
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
OSJNBa0066E19, complete sequence
Length = 145575
Score = 100 bits (214), Expect(3) = 3e-026
Identities = 36/89 (40%), Positives = 58/89 (65%)
Frame = +3 / -2
Query: 114 GDVDTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGY 293
G + +K LPI +AL D R+++ +H+ + AI G +V+G+FTW+ +D FEW GY
Sbjct: 119117 GIAEGNNKSLPITEALKDGHRIEFHSKHLQFVNHAIKNGVNVKGYFTWTFMDCFEWGDGY 118938
Query: 294 TERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
+R+G++Y+DR N KR K+S+ W+ F
Sbjct: 118937 LDRFGLIYIDRLNNLKRYHKQSSYWIANF 118851
Score = 49.6 bits (102), Expect(3) = 3e-026
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +3 / -1
Query: 15 PWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
P + YP GL+++L++ K +Y NP +Y+TENG
Sbjct: 135030 PIFFNYPPGLRELLLYTKRRYNNPTIYVTENG 134935
Score = 27.2 bits (53), Expect(3) = 3e-026
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3 / -3
Query: 468 YAYVLRYMYGVWYVWCMYVV 527
Y Y+ Y+Y Y+WC +++
Sbjct: 24925 YIYIYIYIYIYIYIWCSFLL 24866
>gb|AACV01020304.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020304, whole
genome shotgun sequence
Length = 38522
Score = 100 bits (214), Expect(2) = 3e-026
Identities = 36/89 (40%), Positives = 58/89 (65%)
Frame = +3 / -1
Query: 114 GDVDTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGY 293
G + +K LPI +AL D R+++ +H+ + AI G +V+G+FTW+ +D FEW GY
Sbjct: 31148 GIAEGNNKSLPITEALKDGHRIEFHSKHLQFVNHAIKNGVNVKGYFTWTFMDCFEWGDGY 30969
Query: 294 TERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
+R+G++Y+DR N KR K+S+ W+ F
Sbjct: 30968 LDRFGLIYIDRLNNLKRYHKQSSYWIANF 30882
Score = 48.7 bits (100), Expect(2) = 3e-026
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +3 / -1
Query: 15 PWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
P + YP GL+++L++ K +Y NP +Y+TENG
Sbjct: 31958 PIFFNYPPGLRELLLYTKRRYNNPIIYVTENG 31863
>gb|AC138008.1| Oryza sativa (japonica cultivar-group) chromosome 9 clone
OSJNBb0029L15, *** SEQUENCING IN PROGRESS ***, 7 ordered
pieces
Length = 137309
Score = 100 bits (214), Expect(2) = 6e-026
Identities = 36/89 (40%), Positives = 58/89 (65%)
Frame = +3 / +3
Query: 114 GDVDTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGY 293
G + +K LPI +AL D R+++ +H+ + AI G +V+G+FTW+ +D FEW GY
Sbjct: 62106 GIAEGNNKSLPITEALKDGHRIEFHSKHLQFVNHAIKNGVNVKGYFTWTFMDCFEWGDGY 62285
Query: 294 TERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
+R+G++Y+DR N KR K+S+ W+ F
Sbjct: 62286 LDRFGLIYIDRLNNLKRYHKQSSYWIANF 62372
Score = 49.6 bits (102), Expect(2) = 6e-026
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +3 / +3
Query: 15 PWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
P + YP GL+++L++ K +Y NP +Y+TENG
Sbjct: 46254 PIFFNYPPGLRELLLYTKRRYNNPTIYVTENG 46349
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07,
complete sequence
Length = 154528
Score = 100 bits (214), Expect(2) = 7e-026
Identities = 36/89 (40%), Positives = 58/89 (65%)
Frame = +3 / +3
Query: 114 GDVDTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGY 293
G + +K LPI +AL D R+++ +H+ + AI G +V+G+FTW+ +D FEW GY
Sbjct: 150234 GIAEGNNKSLPITEALKDGHRIEFHSKHLQFVNHAIKNGVNVKGYFTWTFMDCFEWGDGY 150413
Query: 294 TERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
+R+G++Y+DR N KR K+S+ W+ F
Sbjct: 150414 LDRFGLIYIDRLNNLKRYHKQSSYWIANF 150500
Score = 49.6 bits (102), Expect(2) = 7e-026
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +3 / +1
Query: 15 PWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
P + YP GL+++L++ K +Y NP +Y+TENG
Sbjct: 134323 PIFFNYPPGLRELLLYTKRRYNNPTIYVTENG 134418
>gb|C98907.1|C98907 C98907 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3241_1A, mRNA sequence
Length = 395
Score = 108 bits (231), Expect(2) = 3e-025
Identities = 42/92 (45%), Positives = 58/92 (63%)
Frame = +3 / +1
Query: 132 DKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGI 311
D+ + LND R+ Y + +++ + AI GADVRG+F WS LDNFEW+ GYT+R+GI
Sbjct: 49 DQSATLDQVLNDTTRVGYFKGYLASVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGI 228
Query: 312 VYVDRGNGCKRRMKRSAKWLKKFNRAAHTKKK 407
VYVD NG R K SA+W +F + + K
Sbjct: 229 VYVDYKNGLSRHPKASARWFSRFLKGDDAENK 324
Score = 30.4 bits (60), Expect(2) = 3e-025
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3 / +1
Query: 78 GNPPVYITENGIGDVDTKDKPL 143
GNP +Y+TENG+ + D + L
Sbjct: 1 GNPVIYVTENGMDEEDDQSATL 66
>gb|CF309590.1|CF309590 ABF--03-N08.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--03-N08, mRNA sequence
Length = 583
Score = 117 bits (250), Expect = 1e-024
Identities = 45/88 (51%), Positives = 62/88 (70%)
Frame = +3 / -2
Query: 123 DTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTER 302
+ +K + +K+AL D +R++Y +H+ L A+ GA+V+G+F WSLLDNFEWS GYT R
Sbjct: 561 EINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWSEGYTVR 382
Query: 303 YGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
+GI +VD NG KR K SA+W KKF R
Sbjct: 381 FGINFVDYDNGMKRYPKNSARWFKKFLR 298
>gb|CH401191.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000028 genomic
scaffold, whole genome shotgun sequence
Length = 7678539
Score = 91.3 bits (193), Expect(2) = 2e-024
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3 / +1
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKFNR 386
GA+V+G+F WSLLDNFEWS GYT R+GI +VD NG KR K SA+W KKF R
Sbjct: 2206462 GANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFLR 2206620
Score = 86.8 bits (183), Expect(2) = 1e-021
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +3 / +2
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
GA+V+G+F WSLLDNFEW+ GYT R+GI +VD +G KR K SA+W KKF
Sbjct: 2199245 GANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKF 2199397
Score = 59.7 bits (124), Expect(2) = 2e-024
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +3 / +3
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
W Y+YP GL+++L+ IK YGNP +YITENG
Sbjct: 2205945 WFYIYPEGLRELLLHIKENYGNPTIYITENG 2206037
Score = 55.1 bits (114), Expect(2) = 1e-021
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +3 / +2
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
W ++YP G+ ++L+++K YGNP +YITENG
Sbjct: 2198744 WFHIYPEGICEMLLYVKENYGNPTIYITENG 2198836
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 100 bits (214), Expect(2) = 5e-024
Identities = 36/89 (40%), Positives = 58/89 (65%)
Frame = +3 / -3
Query: 114 GDVDTKDKPLPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGY 293
G + +K LPI +AL D R+++ +H+ + AI G +V+G+FTW+ +D FEW GY
Sbjct: 8126771 GIAEGNNKSLPITEALKDGHRIEFHSKHLQFVNHAIKNGVNVKGYFTWTFMDCFEWGDGY 8126592
Query: 294 TERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
+R+G++Y+DR N KR K+S+ W+ F
Sbjct: 8126591 LDRFGLIYIDRLNNLKRYHKQSSYWIANF 8126505
Score = 49.6 bits (102), Expect(2) = 5e-024
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +3 / -2
Query: 15 PWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
P + YP GL+++L++ K +Y NP +Y+TENG
Sbjct: 8143581 PIFFNYPPGLRELLLYTKRRYNNPTIYVTENG 8143486
>gb|AY129294.1| Oryza sativa (japonica cultivar-group) beta-glucosidase mRNA,
complete cds
Length = 2032
Score = 77.1 bits (162), Expect(2) = 1e-023
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +3 / +1
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLK 374
G DVRG+F WSLLDN+EW+AGY+ R+G+ +VD + KR K S +W K
Sbjct: 1543 GCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFK 1689
Score = 56.5 bits (117), Expect(2) = 1e-023
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = +3 / +1
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGD 119
W+Y+ P G++ ++ ++K +Y +PPVYITENG+ D
Sbjct: 1336 WLYIVPRGMRSLMNYVKERYNSPPVYITENGMDD 1437
>dbj|AK119546.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A05, full
insert sequence
Length = 1828
Score = 77.1 bits (162), Expect(2) = 1e-023
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +3 / +3
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLK 374
G DVRG+F WSLLDN+EW+AGY+ R+G+ +VD + KR K S +W K
Sbjct: 1461 GCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFK 1607
Score = 56.5 bits (117), Expect(2) = 1e-023
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = +3 / +3
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGD 119
W+Y+ P G++ ++ ++K +Y +PPVYITENG+ D
Sbjct: 1254 WLYIVPRGMRSLMNYVKERYNSPPVYITENGMDD 1355
>gb|CB673496.1|CB673496 OSJNEe08A17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08A17 3', mRNA sequence
Length = 790
Score = 77.1 bits (162), Expect(2) = 1e-023
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +3 / -3
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLK 374
G DVRG+F WSLLDN+EW+AGY+ R+G+ +VD + KR K S +W K
Sbjct: 539 GCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFK 393
Score = 56.5 bits (117), Expect(2) = 1e-023
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = +3 / -3
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGD 119
W+Y+ P G++ ++ ++K +Y +PPVYITENG+ D
Sbjct: 746 WLYIVPRGMRSLMNYVKERYNSPPVYITENGMDD 645
>gb|CB642724.1|CB642724 OSJNEb03A24.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03A24 3', mRNA sequence
Length = 664
Score = 77.1 bits (162), Expect(2) = 1e-023
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +3 / -2
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLK 374
G DVRG+F WSLLDN+EW+AGY+ R+G+ +VD + KR K S +W K
Sbjct: 390 GCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFK 244
Score = 56.5 bits (117), Expect(2) = 1e-023
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = +3 / -2
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGD 119
W+Y+ P G++ ++ ++K +Y +PPVYITENG+ D
Sbjct: 597 WLYIVPRGMRSLMNYVKERYNSPPVYITENGMDD 496
>gb|AACV01013747.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013747, whole
genome shotgun sequence
Length = 41792
Score = 82.6 bits (174), Expect(2) = 1e-023
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +3 / -2
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
G DVRG+F WSL DNFEW GY+ R+GI Y+D +G KR KRS++WL+ F
Sbjct: 13735 GVDVRGYFAWSLFDNFEWMDGYSVRFGINYIDYKDGLKRYPKRSSQWLQNF 13583
Score = 58.3 bits (121), Expect(2) = 1e-023
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = +3 / -1
Query: 9 GNPWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
G+ W+Y+YP G++++L++ K Y NP +YITENG
Sbjct: 14159 GSSWLYIYPKGIEELLLYTKRTYNNPTIYITENG 14058
>dbj|AK069177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006J10, full
insert sequence
Length = 1833
Score = 84.0 bits (177), Expect(2) = 2e-023
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = +3 / +1
Query: 147 IKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGIVYVD 323
I ++D R+ Y + +I+ LK+AID GA+ G+F WSLLDNFEW GYT R+G+VYVD
Sbjct: 1462 IAQGVHDTTRVAYYRSYITKLKEAIDDGANCIGYFAWSLLDNFEWKLGYTSRFGLVYVD 1638
Score = 48.7 bits (100), Expect(2) = 2e-023
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3 / +1
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGD 119
W+Y+ P GL + ++K KYGNP ++++ENG+ D
Sbjct: 1345 WLYIVPWGLYKAVTYVKEKYGNPTMFLSENGMDD 1446
>ref|NM_193731.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1389
Score = 84.0 bits (177), Expect(2) = 2e-023
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = +3 / +1
Query: 147 IKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGIVYVD 323
I ++D R+ Y + +I+ LK+AID GA+ G+F WSLLDNFEW GYT R+G+VYVD
Sbjct: 1141 IAQGVHDTTRVAYYRSYITKLKEAIDDGANCIGYFAWSLLDNFEWKLGYTSRFGLVYVD 1317
Score = 48.7 bits (100), Expect(2) = 2e-023
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3 / +1
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGD 119
W+Y+ P GL + ++K KYGNP ++++ENG+ D
Sbjct: 1024 WLYIVPWGLYKAVTYVKEKYGNPTMFLSENGMDD 1125
>dbj|AK060988.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C08, full
insert sequence
Length = 1113
Score = 84.0 bits (177), Expect(2) = 2e-023
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = +3 / +2
Query: 147 IKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGIVYVD 323
I ++D R+ Y + +I+ LK+AID GA+ G+F WSLLDNFEW GYT R+G+VYVD
Sbjct: 761 IAQGVHDTTRVAYYRSYITKLKEAIDDGANCIGYFAWSLLDNFEWKLGYTSRFGLVYVD 937
Score = 48.7 bits (100), Expect(2) = 2e-023
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3 / +2
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGD 119
W+Y+ P GL + ++K KYGNP ++++ENG+ D
Sbjct: 644 WLYIVPWGLYKAVTYVKEKYGNPTMFLSENGMDD 745
>gb|CB642882.1|CB642882 OSJNEb03E17.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03E17 3', mRNA sequence
Length = 763
Score = 76.2 bits (160), Expect(2) = 2e-023
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +3 / -1
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLK 374
G DVRG+F WSLLDN+EW+AGY+ R+G+ +VD + KR K S +W K
Sbjct: 442 GCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDTLKRYPKNSVQWFK 296
Score = 56.5 bits (117), Expect(2) = 2e-023
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = +3 / -1
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENGIGD 119
W+Y+ P G++ ++ ++K +Y +PPVYITENG+ D
Sbjct: 649 WLYIVPRGMRSLMNYVKERYNSPPVYITENGMDD 548
>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0592B08
Length = 131096
Score = 82.6 bits (174), Expect(2) = 4e-023
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +3 / -1
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKF 380
G DVRG+F WSL DNFEW GY+ R+GI Y+D +G KR KRS++WL+ F
Sbjct: 117980 GVDVRGYFAWSLFDNFEWMDGYSVRFGINYIDYKDGLKRYPKRSSQWLQNF 117828
Score = 58.3 bits (121), Expect(2) = 4e-023
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = +3 / -3
Query: 9 GNPWIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
G+ W+Y+YP G++++L++ K Y NP +YITENG
Sbjct: 118404 GSSWLYIYPKGIEELLLYTKRTYNNPTIYITENG 118303
>gb|CA999014.1|CA999014 S234M_B11 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 416
Score = 111 bits (236), Expect = 1e-022
Identities = 41/80 (51%), Positives = 58/80 (72%)
Frame = +3 / +3
Query: 141 LPIKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGIVYV 320
+P+++AL D R++Y +H+ L A+ GA+V+G+F WSLLDNFEW+ GYT R+GI +V
Sbjct: 6 MPLEEALKDDTRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWAEGYTVRFGINFV 185
Query: 321 DRGNGCKRRMKRSAKWLKKF 380
D +G KR K SA+W KKF
Sbjct: 186 DYDDGMKRYPKNSARWFKKF 245
>gb|AACV01002847.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002847, whole
genome shotgun sequence
Length = 99512
Score = 92.3 bits (195), Expect(2) = 1e-022
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = +3 / -3
Query: 228 GADVRGHFTWSLLDNFEWSAGYTERYGIVYVDRGNGCKRRMKRSAKWLKKFNRAAHTKKK 407
GADVRG+F WS LDNFEW+ GYT+R+GIVYVD NG R K SA+W +F + + K
Sbjct: 73983 GADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASARWFSRFLKGDDAENK 73804
Score = 46.9 bits (96), Expect(2) = 1e-022
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3 / -3
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
W+++ P GL+ +L + +YGNP +Y+TENG
Sbjct: 74808 WLFIVPWGLRKLLNYAAKRYGNPVIYVTENG 74716
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003
genomic scaffold, whole genome shotgun sequence
Length = 8539496
Score = 84.0 bits (177), Expect(2) = 1e-022
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = +3 / +3
Query: 147 IKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGIVYVD 323
I ++D R+ Y + +I+ LK+AID GA+ G+F WSLLDNFEW GYT R+G+VYVD
Sbjct: 760152 IAQGVHDTTRVAYYRSYITKLKEAIDDGANCIGYFAWSLLDNFEWKLGYTSRFGLVYVD 760328
Score = 46.0 bits (94), Expect(2) = 1e-022
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3 / +3
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
W+Y+ P GL + ++K KYGNP ++++ENG
Sbjct: 759945 WLYIVPWGLYKAVTYVKEKYGNPTMFLSENG 760037
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 84.0 bits (177), Expect(2) = 1e-022
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = +3 / +3
Query: 147 IKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGIVYVD 323
I ++D R+ Y + +I+ LK+AID GA+ G+F WSLLDNFEW GYT R+G+VYVD
Sbjct: 757506 IAQGVHDTTRVAYYRSYITKLKEAIDDGANCIGYFAWSLLDNFEWKLGYTSRFGLVYVD 757682
Score = 46.0 bits (94), Expect(2) = 1e-022
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3 / +3
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
W+Y+ P GL + ++K KYGNP ++++ENG
Sbjct: 757299 WLYIVPWGLYKAVTYVKEKYGNPTMFLSENG 757391
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0455H03
Length = 175947
Score = 84.0 bits (177), Expect(2) = 1e-022
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = +3 / +2
Query: 147 IKDALNDHVRLDYLQRHISVLKDAIDLGADVRGHFTWSLLDNFEWSAGYTERYGIVYVD 323
I ++D R+ Y + +I+ LK+AID GA+ G+F WSLLDNFEW GYT R+G+VYVD
Sbjct: 7679 IAQGVHDTTRVAYYRSYITKLKEAIDDGANCIGYFAWSLLDNFEWKLGYTSRFGLVYVD 7855
Score = 46.0 bits (94), Expect(2) = 1e-022
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3 / +2
Query: 18 WIYMYPNGLKDILMFIKNKYGNPPVYITENG 110
W+Y+ P GL + ++K KYGNP ++++ENG
Sbjct: 7472 WLYIVPWGLYKAVTYVKEKYGNPTMFLSENG 7564
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,530,086,538
Number of Sequences: 438736
Number of extensions: 73644379
Number of successful extensions: 496213
Number of sequences better than 1.0e-020: 99
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 134387939316
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)