TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8010496.2.1
(1046 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_473037.1| Oryza sativa (japonica cultivar-group), p... 324 e-123
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 198 e-120
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 198 e-120
emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromoso... 198 e-120
gb|AACV01010055.1| Oryza sativa (japonica cultivar-group) c... 198 e-120
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 198 e-114
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 198 e-114
dbj|AK070408.1| Oryza sativa (japonica cultivar-group) cDNA... 258 2e-085
ref|XM_469632.1| Oryza sativa (japonica cultivar-group), mRNA 258 2e-085
dbj|AK104929.1| Oryza sativa (japonica cultivar-group) cDNA... 258 2e-085
dbj|AK102748.1| Oryza sativa (japonica cultivar-group) cDNA... 252 9e-085
gb|AU173081.1|AU173081 AU173081 Rice root Oryza sativa (jap... 305 5e-081
gb|CB644827.1|CB644827 OSJNEb06D08.f OSJNEb Oryza sativa (j... 229 5e-074
gb|AACV01006539.1| Oryza sativa (japonica cultivar-group) c... 158 2e-068
gb|AC137547.2| Oryza sativa (japonica cultivar-group) chrom... 158 4e-066
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 158 3e-063
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 158 3e-063
gb|CB664661.1|CB664661 OSJNEd10I06.r OSJNEd Oryza sativa (j... 232 6e-061
gb|AACV01007878.1| Oryza sativa (japonica cultivar-group) c... 158 3e-046
gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 ... 158 9e-045
gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC O... 158 1e-044
gb|CB000870.1|CB000870 S345K_E05 Rice cold stress germinati... 177 1e-044
gb|CB648856.1|CB648856 OSJNEb12H11.r OSJNEb Oryza sativa (j... 175 6e-044
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 158 3e-043
gb|CB644828.1|CB644828 OSJNEb06D08.r OSJNEb Oryza sativa (j... 172 3e-043
gb|CB670711.1|CB670711 OSJNEe03O24.r OSJNEe Oryza sativa (j... 175 4e-043
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 158 6e-043
gb|CB670083.1|CB670083 OSJNEe02P22.r OSJNEe Oryza sativa (j... 167 9e-042
gb|C25232.1|C25232 C25232 Rice shoot Oryza sativa (japonica... 172 6e-041
gb|CB661173.1|CB661173 OSJNEd03K23.r OSJNEd Oryza sativa (j... 152 5e-037
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 158 9e-037
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 158 9e-037
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 158 9e-037
dbj|AK121369.1| Oryza sativa (japonica cultivar-group) cDNA... 105 3e-030
dbj|AK100449.1| Oryza sativa (japonica cultivar-group) cDNA... 109 3e-029
dbj|AK067774.1| Oryza sativa (japonica cultivar-group) cDNA... 105 7e-028
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 80 1e-026
emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromoso... 80 1e-026
gb|CA999018.1|CA999018 S234M_B05 Rice cold stress germinati... 109 1e-026
dbj|AK119913.1| Oryza sativa (japonica cultivar-group) cDNA... 80 1e-026
ref|XM_474329.1| Oryza sativa (japonica cultivar-group), p... 80 1e-026
dbj|AK063458.1| Oryza sativa (japonica cultivar-group) cDNA... 97 2e-026
dbj|AK099370.1| Oryza sativa (japonica cultivar-group) cDNA... 97 2e-026
ref|XM_476150.1| Oryza sativa (japonica cultivar-group), p... 97 2e-026
gb|AACV01010653.1| Oryza sativa (japonica cultivar-group) c... 80 6e-026
gb|AU095892.1|AU095892 AU095892 Rice green shoot Oryza sati... 113 1e-025
gb|AACV01014925.1| Oryza sativa (japonica cultivar-group) c... 64 3e-024
gb|C97417.1|C97417 C97417 Rice callus Oryza sativa (japonic... 50 5e-024
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 73 7e-024
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 73 7e-024
gb|AC130598.2| Oryza sativa (japonica cultivar-group) chrom... 73 8e-024
gb|AACV01010809.1| Oryza sativa (japonica cultivar-group) c... 73 9e-024
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 69 1e-023
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 69 1e-023
dbj|AP002094.1| Oryza sativa (japonica cultivar-group) geno... 69 1e-023
dbj|AP002745.2| Oryza sativa (japonica cultivar-group) geno... 69 1e-023
gb|AACV01000461.1| Oryza sativa (japonica cultivar-group) c... 69 1e-023
dbj|AK111165.1| Oryza sativa (japonica cultivar-group) cDNA... 69 1e-023
dbj|AK109524.1| Oryza sativa (japonica cultivar-group) cDNA... 69 1e-023
ref|NM_188489.1| Oryza sativa (japonica cultivar-group), p... 69 1e-023
gb|CB671839.1|CB671839 OSJNEe05J14.r OSJNEe Oryza sativa (j... 87 1e-022
dbj|AK106726.1| Oryza sativa (japonica cultivar-group) cDNA... 82 2e-022
ref|XM_463939.1| Oryza sativa (japonica cultivar-group), mRNA 82 2e-022
gb|CA999085.1|CA999085 S234M_H10 Rice cold stress germinati... 102 3e-022
gb|AACV01000462.1| Oryza sativa (japonica cultivar-group) c... 68 3e-022
dbj|AK103304.1| Oryza sativa (japonica cultivar-group) cDNA... 68 4e-022
ref|NM_188491.1| Oryza sativa (japonica cultivar-group), p... 68 4e-022
dbj|AK071784.1| Oryza sativa (japonica cultivar-group) cDNA... 85 7e-022
ref|XM_482166.1| Oryza sativa (japonica cultivar-group), mRNA 85 7e-022
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 77 3e-021
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 77 3e-021
dbj|AP003722.3| Oryza sativa (japonica cultivar-group) geno... 77 4e-021
dbj|AP003614.2| Oryza sativa (japonica cultivar-group) geno... 64 4e-021
gb|AACV01000869.1| Oryza sativa (japonica cultivar-group) c... 77 4e-021
dbj|AK106887.1| Oryza sativa (japonica cultivar-group) cDNA... 77 4e-021
ref|NM_183708.1| Oryza sativa (japonica cultivar-group), p... 77 4e-021
gb|AACV01024612.1| Oryza sativa (japonica cultivar-group) c... 65 7e-021
gb|AACV01020446.1| Oryza sativa (japonica cultivar-group) c... 72 9e-021
>ref|XM_473037.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1872
Score = 324 bits (701), Expect(3) = e-123
Identities = 127/166 (76%), Positives = 140/166 (84%)
Frame = -3 / +1
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGG+A FNHG+GQPLQY VANSFLAALYADYME+VNVPGWYCGP FMT +DLR FARSQ+
Sbjct: 1282 KGGLAQFNHGKGQPLQYTVANSFLAALYADYMESVNVPGWYCGPYFMTVDDLRSFARSQV 1461
Query: 567 NYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGG 388
NYILGDNPKKMSYVVG+G KYPR +HHRGASTPHNG+KYSCTGGYKWRD+K ADPN+L G
Sbjct: 1462 NYILGDNPKKMSYVVGYGKKYPRRLHHRGASTPHNGIKYSCTGGYKWRDTKGADPNVLVG 1641
Query: 387 AMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRGA 250
AMVGGPDKND FKD+R T + GNAG LT+SGRGA
Sbjct: 1642 AMVGGPDKNDQFKDARLTYAQNEPTLVGNAGLVAALVALTNSGRGA 1779
Score = 218 bits (470), Expect(3) = 1e-077
Identities = 96/137 (70%), Positives = 98/137 (71%)
Frame = +2 / -2
Query: 335 VLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLL 514
V R SL SFLSGPPTMAP S GSA L+S HL PPVHEYL PLCGVDAP WC+ RGY L
Sbjct: 1694 VRRASLNWSFLSGPPTMAPTSTFGSAPLVSLHLYPPVHEYLMPLCGVDAPLWCSRRGYFL 1515
Query: 515 PNPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELAT 694
P PTT*LIF GLSPRM* *DLA RRS VMK GPQYQPGTLT RKELAT
Sbjct: 1514 PYPTT*LIFFGLSPRM*FT*DLAKERRSSTVMK*GPQYQPGTLTDSM*SA*SAARKELAT 1335
Query: 695 TYCSGCPLPWLKSAIPP 745
YCSG P PWL A PP
Sbjct: 1334 VYCSGWPFPWLNCASPP 1284
Score = 185 bits (398), Expect(4) = 4e-063
Identities = 86/125 (68%), Positives = 92/125 (73%)
Frame = +1 / -1
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG + V V L V PLV AGARVLDAVVRR R VV P VL A P+HVAHLL V+
Sbjct: 1656 PADHGADEHVRVGPLGVPPLVPAGARVLDAVVRRRRPPVVQPPRVLLAVPHHVAHLLRVI 1477
Query: 553 TENVVDLRPGELTEVVGGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAVVEE 732
+NVV LRPGE E+V GHEV AVPAGDVDGLHVVGVER E+GVGD VLQRL VVE
Sbjct: 1476 PKNVVHLRPGEGAEIVDGHEVGAAVPAGDVDGLHVVGVERGEEGVGDGVLQRLALPVVEL 1297
Query: 733 RHPAL 747
R P L
Sbjct: 1296 REPTL 1282
Score = 126 bits (269), Expect(3) = e-123
Identities = 51/77 (66%), Positives = 54/77 (70%)
Frame = -2 / +1
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
TD RLPK AK +ILDF VFSW LPGA+ RMFLNPGYPY SL GYHN TS+
Sbjct: 1057 TDPRLPKNAKAFYSILDFSVFSWDNKLPGAELLLSRLRMFLNPGYPYEESLIGYHNTTSM 1236
Query: 793 NMCMYFPGFAAFNFTXG 743
NMC YFP F AFNFT G
Sbjct: 1237 NMCTYFPRFGAFNFTKG 1287
Score = 100 bits (213), Expect(5) = 2e-047
Identities = 46/66 (69%), Positives = 51/66 (77%)
Frame = -2 / +3
Query: 685 LLSRCALRRLHGGRQRPRLVLRSKLHDHQRPP*VRQVSDQLHSR*QPQEDELRGWVRQQV 506
LL R ALRRLHG RQRPRLVLR LHD +R P +RQVS +LHS P+EDELRG VRQ+V
Sbjct: 1344 LLPRRALRRLHGVRQRPRLVLRPLLHDRRRSPLLRQVSGELHSWG*PEEDELRGGVRQEV 1523
Query: 505 PTARAP 488
P A AP
Sbjct: 1524 PAAAAP 1541
Score = 79.9 bits (168), Expect(3) = 1e-077
Identities = 41/75 (54%), Positives = 42/75 (56%)
Frame = +3 / -2
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNTXKSR 929
VKLKA K GK +HM LV LW P S S G*PGLRNM QL T KSR
Sbjct: 1280 VKLKAPKRGK*VHMFMLVVLWYPMSDSS*G*PGLRNMRSRDSSSSAPGSLLSQLKTEKSR 1101
Query: 930 MLXXXLAXLGSRXSV 974
ML LA LGSR SV
Sbjct: 1100 ML*KALAFLGSRGSV 1056
Score = 61.6 bits (128), Expect(4) = 4e-063
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = +2 / -1
Query: 863 QPRQQQLGARELXXPAEHXEVEDVXXXLGVLGQPXVG 973
+PRQQQLGAR+L PAE EVED LGVLGQP VG
Sbjct: 1167 EPRQQQLGARQLVVPAEDGEVEDAVEGLGVLGQPRVG 1057
Score = 51.0 bits (105), Expect(5) = 2e-047
Identities = 20/36 (55%), Positives = 20/36 (55%)
Frame = -3 / +2
Query: 972 PTXGCPXTPRXXXXXXXXXXSAGXXSSRAPSCCXRG 865
PT GCP TPR SAG S RAPSCC RG
Sbjct: 1058 PTRGCPRTPRPSTASSTSPSSAGTTSCRAPSCCCRG 1165
Score = 47.3 bits (97), Expect(5) = 2e-047
Identities = 22/47 (46%), Positives = 23/47 (48%)
Frame = -2 / +1
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
+ QNEPTLV VTAVDKNTMFSAVP P
Sbjct: 1696 YAQNEPTLVGNAGLVAALVALTNSGRGAGVTAVDKNTMFSAVPPMFP 1836
Score = 36.3 bits (73), Expect(3) = e-123
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1 / +3
Query: 248 RNRRRQEHHVLRRAA 204
R+RRRQEHHVLRRAA
Sbjct: 1782 RHRRRQEHHVLRRAA 1826
Score = 35.9 bits (72), Expect(5) = 2e-047
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / +3
Query: 803 HQPQHVHVLSGLRRLQLH 750
HQ +HVH+L LRRLQLH
Sbjct: 1227 HQHEHVHLLPALRRLQLH 1280
Score = 35.9 bits (72), Expect(3) = 1e-077
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / -2
Query: 195 GTLCGTAENMVFLSTAVT 248
G + GTAENMVFLSTAVT
Sbjct: 1835 GNMGGTAENMVFLSTAVT 1782
Score = 33.1 bits (66), Expect(5) = 2e-047
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 406 PQPAGGXHGRRARQERRLQGLAQH 335
P+ A HGRRA QER +QG A H
Sbjct: 1623 PERARRRHGRRAGQERPVQGRAPH 1694
Score = 31.8 bits (63), Expect(4) = 4e-063
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +1 / -3
Query: 751 *S*RRRSPESTCTC*GWW 804
*S*RRRS S CTC WW
Sbjct: 1279 *S*RRRSAGSRCTCSCWW 1226
Score = 25.4 bits (49), Expect(4) = 4e-063
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 1812 EHGVLVDGG 1786
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 198 bits (427), Expect(4) = e-120
Identities = 78/108 (72%), Positives = 87/108 (80%)
Frame = -3 / -2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q+NYILGDNPKKMSYVVG+G KYPR +HHRGASTPHNG+KYSCTGGYKWRD+K ADPN+L
Sbjct: 2759276 QVNYILGDNPKKMSYVVGYGKKYPRRLHHRGASTPHNGIKYSCTGGYKWRDTKGADPNVL 2759097
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRGA 250
GAMVGGPDKND FKD+R T + GNAG LT+SGRGA
Sbjct: 2759096 VGAMVGGPDKNDQFKDARLTYAQNEPTLVGNAGLVAALVALTNSGRGA 2758953
Score = 136 bits (291), Expect(4) = 2e-077
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +2 / +1
Query: 335 VLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLL 514
V R SL SFLSGPPTMAP S GSA L+S HL PPVHEYL PLCGVDAP WC+ RGY L
Sbjct: 2759038 VRRASLNWSFLSGPPTMAPTSTFGSAPLVSLHLYPPVHEYLMPLCGVDAPLWCSRRGYFL 2759217
Query: 515 PNPTT*LIFLGLSPRM* 565
P PTT*LIF GLSPRM*
Sbjct: 2759218 PYPTT*LIFFGLSPRM* 2759268
Score = 133 bits (285), Expect(4) = e-120
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = -3 / -2
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGG+A FNHG+GQPLQY VANSFLAALYADYME+VNVPGWYCGP FMT +DLR FARSQ+
Sbjct: 2759540 KGGLAQFNHGKGQPLQYTVANSFLAALYADYMESVNVPGWYCGPYFMTVDDLRSFARSQV 2759361
Query: 567 NYI 559
I
Sbjct: 2759360 RVI 2759352
Score = 126 bits (269), Expect(4) = e-120
Identities = 51/77 (66%), Positives = 54/77 (70%)
Frame = -2 / -2
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
TD RLPK AK +ILDF VFSW LPGA+ RMFLNPGYPY SL GYHN TS+
Sbjct: 2759765 TDPRLPKNAKAFYSILDFSVFSWDNKLPGAELLLSRLRMFLNPGYPYEESLIGYHNTTSM 2759586
Query: 793 NMCMYFPGFAAFNFTXG 743
NMC YFP F AFNFT G
Sbjct: 2759585 NMCTYFPRFGAFNFTKG 2759535
Score = 100 bits (212), Expect(4) = 2e-077
Identities = 44/59 (74%), Positives = 46/59 (77%)
Frame = +1 / +3
Query: 571 LRPGELTEVVGGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAVVEERHPAL 747
LRPGE E+V GHEV AVPAGDVDGLHVVGVER E+GVGD VLQRL VVE R P L
Sbjct: 2759364 LRPGEGAEIVDGHEVGAAVPAGDVDGLHVVGVERGEEGVGDGVLQRLALPVVELREPTL 2759540
Score = 90.0 bits (190), Expect(4) = 8e-053
Identities = 43/67 (64%), Positives = 47/67 (70%)
Frame = +1 / +3
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG + V V L V PLV AGARVLDAVVRR R VV P VL A P+HVAHLL V+
Sbjct: 2759076 PADHGADEHVRVGPLGVPPLVPAGARVLDAVVRRRRPPVVQPPRVLLAVPHHVAHLLRVI 2759255
Query: 553 TENVVDL 573
+NVV L
Sbjct: 2759256 PKNVVHL 2759276
Score = 85.4 bits (180), Expect(4) = 8e-053
Identities = 37/58 (63%), Positives = 37/58 (63%)
Frame = +2 / +1
Query: 572 *DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
*DLA RRS VMK GPQYQPGTLT RKELAT YCSG P PWL A PP
Sbjct: 2759365 *DLAKERRSSTVMK*GPQYQPGTLTDSM*SA*SAARKELATVYCSGWPFPWLNCASPP 2759538
Score = 80.3 bits (169), Expect(3) = 5e-026
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -3 / -1
Query: 597 DLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
++ FARSQ++Y+LG NPK MSY+VG+GS YP HVHHRGAS P
Sbjct: 12063762 EILRFARSQVDYVLGKNPKGMSYMVGYGSYYPTHVHHRGASIP 12063634
Score = 79.9 bits (168), Expect(4) = 2e-077
Identities = 41/75 (54%), Positives = 42/75 (56%)
Frame = +3 / +1
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNTXKSR 929
VKLKA K GK +HM LV LW P S S G*PGLRNM QL T KSR
Sbjct: 2759542 VKLKAPKRGK*VHMFMLVVLWYPMSDSS*G*PGLRNMRSRDSSSSAPGSLLSQLKTEKSR 2759721
Query: 930 MLXXXLAXLGSRXSV 974
ML LA LGSR SV
Sbjct: 2759722 ML*KALAFLGSRGSV 2759766
Score = 62.5 bits (130), Expect(6) = 8e-044
Identities = 29/44 (65%), Positives = 32/44 (72%)
Frame = -2 / -1
Query: 685 LLSRCALRRLHGGRQRPRLVLRSKLHDHQRPP*VRQVSDQLHSR 554
LL R ALRRLHG RQRPRLVLR LHD +R P +RQVS + R
Sbjct: 2759478 LLPRRALRRLHGVRQRPRLVLRPLLHDRRRSPLLRQVSGTCNRR 2759347
Score = 61.6 bits (128), Expect(4) = 8e-053
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = +2 / +3
Query: 863 QPRQQQLGARELXXPAEHXEVEDVXXXLGVLGQPXVG 973
+PRQQQLGAR+L PAE EVED LGVLGQP VG
Sbjct: 2759655 EPRQQQLGARQLVVPAEDGEVEDAVEGLGVLGQPRVG 2759765
Score = 51.5 bits (106), Expect(3) = 5e-026
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = -3 / -1
Query: 432 KWRDSKKADPNLLGGAMVGGPDKNDGFKDSR 340
K+ +SK ADPN+L GA+VGGPD ND + D R
Sbjct: 12063585 KYYNSKNADPNVLHGALVGGPDANDAYDDDR 12063493
Score = 51.0 bits (105), Expect(6) = 8e-044
Identities = 20/36 (55%), Positives = 20/36 (55%)
Frame = -3 / -3
Query: 972 PTXGCPXTPRXXXXXXXXXXSAGXXSSRAPSCCXRG 865
PT GCP TPR SAG S RAPSCC RG
Sbjct: 2759764 PTRGCPRTPRPSTASSTSPSSAGTTSCRAPSCCCRG 2759657
Score = 47.3 bits (97), Expect(6) = 8e-044
Identities = 22/47 (46%), Positives = 23/47 (48%)
Frame = -2 / -2
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
+ QNEPTLV VTAVDKNTMFSAVP P
Sbjct: 2759036 YAQNEPTLVGNAGLVAALVALTNSGRGAGVTAVDKNTMFSAVPPMFP 2758896
Score = 42.3 bits (86), Expect(6) = 8e-044
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = -2 / -1
Query: 568 QLHSR*QPQEDELRGWVRQQVPTARAP 488
+LHS P+EDELRG VRQ+VP A AP
Sbjct: 2759271 ELHSWG*PEEDELRGGVRQEVPAAAAP 2759191
Score = 36.3 bits (73), Expect(4) = e-120
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1 / -1
Query: 248 RNRRRQEHHVLRRAA 204
R+RRRQEHHVLRRAA
Sbjct: 2758950 RHRRRQEHHVLRRAA 2758906
Score = 35.9 bits (72), Expect(6) = 8e-044
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -1
Query: 803 HQPQHVHVLSGLRRLQLH 750
HQ +HVH+L LRRLQLH
Sbjct: 2759595 HQHEHVHLLPALRRLQLH 2759542
Score = 35.9 bits (72), Expect(4) = 2e-077
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 195 GTLCGTAENMVFLSTAVT 248
G + GTAENMVFLSTAVT
Sbjct: 2758897 GNMGGTAENMVFLSTAVT 2758950
Score = 33.1 bits (66), Expect(6) = 8e-044
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 406 PQPAGGXHGRRARQERRLQGLAQH 335
P+ A HGRRA QER +QG A H
Sbjct: 2759109 PERARRRHGRRAGQERPVQGRAPH 2759038
Score = 31.8 bits (63), Expect(4) = 8e-053
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 751 *S*RRRSPESTCTC*GWW 804
*S*RRRS S CTC WW
Sbjct: 2759543 *S*RRRSAGSRCTCSCWW 2759596
Score = 28.1 bits (55), Expect(3) = 5e-026
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3 / -1
Query: 705 LQYVVANSFLAALYADYM 652
+QYV +++FL +YADY+
Sbjct: 12063867 MQYVSSSAFLLTVYADYL 12063814
>ref|NT_079863.2| Oryza sativa (japonica cultivar-group)
Length = 2656602
Score = 198 bits (427), Expect(4) = e-120
Identities = 78/108 (72%), Positives = 87/108 (80%)
Frame = -3 / -1
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q+NYILGDNPKKMSYVVG+G KYPR +HHRGASTPHNG+KYSCTGGYKWRD+K ADPN+L
Sbjct: 2443944 QVNYILGDNPKKMSYVVGYGKKYPRRLHHRGASTPHNGIKYSCTGGYKWRDTKGADPNVL 2443765
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRGA 250
GAMVGGPDKND FKD+R T + GNAG LT+SGRGA
Sbjct: 2443764 VGAMVGGPDKNDQFKDARLTYAQNEPTLVGNAGLVAALVALTNSGRGA 2443621
Score = 136 bits (291), Expect(4) = 2e-077
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +2 / +2
Query: 335 VLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLL 514
V R SL SFLSGPPTMAP S GSA L+S HL PPVHEYL PLCGVDAP WC+ RGY L
Sbjct: 2443706 VRRASLNWSFLSGPPTMAPTSTFGSAPLVSLHLYPPVHEYLMPLCGVDAPLWCSRRGYFL 2443885
Query: 515 PNPTT*LIFLGLSPRM* 565
P PTT*LIF GLSPRM*
Sbjct: 2443886 PYPTT*LIFFGLSPRM* 2443936
Score = 133 bits (285), Expect(4) = e-120
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = -3 / -1
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGG+A FNHG+GQPLQY VANSFLAALYADYME+VNVPGWYCGP FMT +DLR FARSQ+
Sbjct: 2444208 KGGLAQFNHGKGQPLQYTVANSFLAALYADYMESVNVPGWYCGPYFMTVDDLRSFARSQV 2444029
Query: 567 NYI 559
I
Sbjct: 2444028 RVI 2444020
Score = 126 bits (269), Expect(4) = e-120
Identities = 51/77 (66%), Positives = 54/77 (70%)
Frame = -2 / -1
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
TD RLPK AK +ILDF VFSW LPGA+ RMFLNPGYPY SL GYHN TS+
Sbjct: 2444433 TDPRLPKNAKAFYSILDFSVFSWDNKLPGAELLLSRLRMFLNPGYPYEESLIGYHNTTSM 2444254
Query: 793 NMCMYFPGFAAFNFTXG 743
NMC YFP F AFNFT G
Sbjct: 2444253 NMCTYFPRFGAFNFTKG 2444203
Score = 100 bits (212), Expect(4) = 2e-077
Identities = 44/59 (74%), Positives = 46/59 (77%)
Frame = +1 / +1
Query: 571 LRPGELTEVVGGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAVVEERHPAL 747
LRPGE E+V GHEV AVPAGDVDGLHVVGVER E+GVGD VLQRL VVE R P L
Sbjct: 2444032 LRPGEGAEIVDGHEVGAAVPAGDVDGLHVVGVERGEEGVGDGVLQRLALPVVELREPTL 2444208
Score = 90.0 bits (190), Expect(5) = 4e-055
Identities = 43/67 (64%), Positives = 47/67 (70%)
Frame = +1 / +1
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG + V V L V PLV AGARVLDAVVRR R VV P VL A P+HVAHLL V+
Sbjct: 2443744 PADHGADEHVRVGPLGVPPLVPAGARVLDAVVRRRRPPVVQPPRVLLAVPHHVAHLLRVI 2443923
Query: 553 TENVVDL 573
+NVV L
Sbjct: 2443924 PKNVVHL 2443944
Score = 85.4 bits (180), Expect(5) = 4e-055
Identities = 37/58 (63%), Positives = 37/58 (63%)
Frame = +2 / +2
Query: 572 *DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
*DLA RRS VMK GPQYQPGTLT RKELAT YCSG P PWL A PP
Sbjct: 2444033 *DLAKERRSSTVMK*GPQYQPGTLTDSM*SA*SAARKELATVYCSGWPFPWLNCASPP 2444206
Score = 79.9 bits (168), Expect(4) = 2e-077
Identities = 41/75 (54%), Positives = 42/75 (56%)
Frame = +3 / +2
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNTXKSR 929
VKLKA K GK +HM LV LW P S S G*PGLRNM QL T KSR
Sbjct: 2444210 VKLKAPKRGK*VHMFMLVVLWYPMSDSS*G*PGLRNMRSRDSSSSAPGSLLSQLKTEKSR 2444389
Query: 930 MLXXXLAXLGSRXSV 974
ML LA LGSR SV
Sbjct: 2444390 ML*KALAFLGSRGSV 2444434
Score = 62.5 bits (130), Expect(6) = 9e-044
Identities = 29/44 (65%), Positives = 32/44 (72%)
Frame = -2 / -3
Query: 685 LLSRCALRRLHGGRQRPRLVLRSKLHDHQRPP*VRQVSDQLHSR 554
LL R ALRRLHG RQRPRLVLR LHD +R P +RQVS + R
Sbjct: 2444146 LLPRRALRRLHGVRQRPRLVLRPLLHDRRRSPLLRQVSGTCNRR 2444015
Score = 61.6 bits (128), Expect(5) = 4e-055
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = +2 / +1
Query: 863 QPRQQQLGARELXXPAEHXEVEDVXXXLGVLGQPXVG 973
+PRQQQLGAR+L PAE EVED LGVLGQP VG
Sbjct: 2444323 EPRQQQLGARQLVVPAEDGEVEDAVEGLGVLGQPRVG 2444433
Score = 51.0 bits (105), Expect(6) = 9e-044
Identities = 20/36 (55%), Positives = 20/36 (55%)
Frame = -3 / -2
Query: 972 PTXGCPXTPRXXXXXXXXXXSAGXXSSRAPSCCXRG 865
PT GCP TPR SAG S RAPSCC RG
Sbjct: 2444432 PTRGCPRTPRPSTASSTSPSSAGTTSCRAPSCCCRG 2444325
Score = 47.3 bits (97), Expect(6) = 9e-044
Identities = 22/47 (46%), Positives = 23/47 (48%)
Frame = -2 / -1
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
+ QNEPTLV VTAVDKNTMFSAVP P
Sbjct: 2443704 YAQNEPTLVGNAGLVAALVALTNSGRGAGVTAVDKNTMFSAVPPMFP 2443564
Score = 42.3 bits (86), Expect(6) = 9e-044
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = -2 / -3
Query: 568 QLHSR*QPQEDELRGWVRQQVPTARAP 488
+LHS P+EDELRG VRQ+VP A AP
Sbjct: 2443939 ELHSWG*PEEDELRGGVRQEVPAAAAP 2443859
Score = 36.3 bits (73), Expect(4) = e-120
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1 / -3
Query: 248 RNRRRQEHHVLRRAA 204
R+RRRQEHHVLRRAA
Sbjct: 2443618 RHRRRQEHHVLRRAA 2443574
Score = 35.9 bits (72), Expect(4) = 2e-077
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 195 GTLCGTAENMVFLSTAVT 248
G + GTAENMVFLSTAVT
Sbjct: 2443565 GNMGGTAENMVFLSTAVT 2443618
Score = 35.9 bits (72), Expect(6) = 9e-044
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 803 HQPQHVHVLSGLRRLQLH 750
HQ +HVH+L LRRLQLH
Sbjct: 2444263 HQHEHVHLLPALRRLQLH 2444210
Score = 33.1 bits (66), Expect(6) = 9e-044
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 406 PQPAGGXHGRRARQERRLQGLAQH 335
P+ A HGRRA QER +QG A H
Sbjct: 2443777 PERARRRHGRRAGQERPVQGRAPH 2443706
Score = 31.8 bits (63), Expect(5) = 4e-055
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +1 / +3
Query: 751 *S*RRRSPESTCTC*GWW 804
*S*RRRS S CTC WW
Sbjct: 2444211 *S*RRRSAGSRCTCSCWW 2444264
Score = 25.4 bits (49), Expect(5) = 4e-055
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 2443588 EHGVLVDGG 2443614
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
complete sequence
Length = 170765
Score = 198 bits (427), Expect(4) = e-120
Identities = 78/108 (72%), Positives = 87/108 (80%)
Frame = -3 / -3
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q+NYILGDNPKKMSYVVG+G KYPR +HHRGASTPHNG+KYSCTGGYKWRD+K ADPN+L
Sbjct: 101637 QVNYILGDNPKKMSYVVGYGKKYPRRLHHRGASTPHNGIKYSCTGGYKWRDTKGADPNVL 101458
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRGA 250
GAMVGGPDKND FKD+R T + GNAG LT+SGRGA
Sbjct: 101457 VGAMVGGPDKNDQFKDARLTYAQNEPTLVGNAGLVAALVALTNSGRGA 101314
Score = 136 bits (291), Expect(4) = 2e-077
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +2 / +2
Query: 335 VLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLL 514
V R SL SFLSGPPTMAP S GSA L+S HL PPVHEYL PLCGVDAP WC+ RGY L
Sbjct: 101399 VRRASLNWSFLSGPPTMAPTSTFGSAPLVSLHLYPPVHEYLMPLCGVDAPLWCSRRGYFL 101578
Query: 515 PNPTT*LIFLGLSPRM* 565
P PTT*LIF GLSPRM*
Sbjct: 101579 PYPTT*LIFFGLSPRM* 101629
Score = 133 bits (285), Expect(4) = e-120
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = -3 / -3
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGG+A FNHG+GQPLQY VANSFLAALYADYME+VNVPGWYCGP FMT +DLR FARSQ+
Sbjct: 101901 KGGLAQFNHGKGQPLQYTVANSFLAALYADYMESVNVPGWYCGPYFMTVDDLRSFARSQV 101722
Query: 567 NYI 559
I
Sbjct: 101721 RVI 101713
Score = 126 bits (269), Expect(4) = e-120
Identities = 51/77 (66%), Positives = 54/77 (70%)
Frame = -2 / -3
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
TD RLPK AK +ILDF VFSW LPGA+ RMFLNPGYPY SL GYHN TS+
Sbjct: 102126 TDPRLPKNAKAFYSILDFSVFSWDNKLPGAELLLSRLRMFLNPGYPYEESLIGYHNTTSM 101947
Query: 793 NMCMYFPGFAAFNFTXG 743
NMC YFP F AFNFT G
Sbjct: 101946 NMCTYFPRFGAFNFTKG 101896
Score = 100 bits (212), Expect(4) = 2e-077
Identities = 44/59 (74%), Positives = 46/59 (77%)
Frame = +1 / +1
Query: 571 LRPGELTEVVGGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAVVEERHPAL 747
LRPGE E+V GHEV AVPAGDVDGLHVVGVER E+GVGD VLQRL VVE R P L
Sbjct: 101725 LRPGEGAEIVDGHEVGAAVPAGDVDGLHVVGVERGEEGVGDGVLQRLALPVVELREPTL 101901
Score = 90.0 bits (190), Expect(5) = 5e-055
Identities = 43/67 (64%), Positives = 47/67 (70%)
Frame = +1 / +1
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG + V V L V PLV AGARVLDAVVRR R VV P VL A P+HVAHLL V+
Sbjct: 101437 PADHGADEHVRVGPLGVPPLVPAGARVLDAVVRRRRPPVVQPPRVLLAVPHHVAHLLRVI 101616
Query: 553 TENVVDL 573
+NVV L
Sbjct: 101617 PKNVVHL 101637
Score = 85.4 bits (180), Expect(5) = 5e-055
Identities = 37/58 (63%), Positives = 37/58 (63%)
Frame = +2 / +2
Query: 572 *DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
*DLA RRS VMK GPQYQPGTLT RKELAT YCSG P PWL A PP
Sbjct: 101726 *DLAKERRSSTVMK*GPQYQPGTLTDSM*SA*SAARKELATVYCSGWPFPWLNCASPP 101899
Score = 79.9 bits (168), Expect(4) = 2e-077
Identities = 41/75 (54%), Positives = 42/75 (56%)
Frame = +3 / +2
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNTXKSR 929
VKLKA K GK +HM LV LW P S S G*PGLRNM QL T KSR
Sbjct: 101903 VKLKAPKRGK*VHMFMLVVLWYPMSDSS*G*PGLRNMRSRDSSSSAPGSLLSQLKTEKSR 102082
Query: 930 MLXXXLAXLGSRXSV 974
ML LA LGSR SV
Sbjct: 102083 ML*KALAFLGSRGSV 102127
Score = 62.5 bits (130), Expect(6) = 1e-043
Identities = 29/44 (65%), Positives = 32/44 (72%)
Frame = -2 / -2
Query: 685 LLSRCALRRLHGGRQRPRLVLRSKLHDHQRPP*VRQVSDQLHSR 554
LL R ALRRLHG RQRPRLVLR LHD +R P +RQVS + R
Sbjct: 101839 LLPRRALRRLHGVRQRPRLVLRPLLHDRRRSPLLRQVSGTCNRR 101708
Score = 61.6 bits (128), Expect(5) = 5e-055
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = +2 / +1
Query: 863 QPRQQQLGARELXXPAEHXEVEDVXXXLGVLGQPXVG 973
+PRQQQLGAR+L PAE EVED LGVLGQP VG
Sbjct: 102016 EPRQQQLGARQLVVPAEDGEVEDAVEGLGVLGQPRVG 102126
Score = 51.0 bits (105), Expect(6) = 1e-043
Identities = 20/36 (55%), Positives = 20/36 (55%)
Frame = -3 / -1
Query: 972 PTXGCPXTPRXXXXXXXXXXSAGXXSSRAPSCCXRG 865
PT GCP TPR SAG S RAPSCC RG
Sbjct: 102125 PTRGCPRTPRPSTASSTSPSSAGTTSCRAPSCCCRG 102018
Score = 47.3 bits (97), Expect(6) = 1e-043
Identities = 22/47 (46%), Positives = 23/47 (48%)
Frame = -2 / -3
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
+ QNEPTLV VTAVDKNTMFSAVP P
Sbjct: 101397 YAQNEPTLVGNAGLVAALVALTNSGRGAGVTAVDKNTMFSAVPPMFP 101257
Score = 42.3 bits (86), Expect(6) = 1e-043
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = -2 / -2
Query: 568 QLHSR*QPQEDELRGWVRQQVPTARAP 488
+LHS P+EDELRG VRQ+VP A AP
Sbjct: 101632 ELHSWG*PEEDELRGGVRQEVPAAAAP 101552
Score = 36.3 bits (73), Expect(4) = e-120
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1 / -2
Query: 248 RNRRRQEHHVLRRAA 204
R+RRRQEHHVLRRAA
Sbjct: 101311 RHRRRQEHHVLRRAA 101267
Score = 35.9 bits (72), Expect(4) = 2e-077
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 195 GTLCGTAENMVFLSTAVT 248
G + GTAENMVFLSTAVT
Sbjct: 101258 GNMGGTAENMVFLSTAVT 101311
Score = 35.9 bits (72), Expect(6) = 1e-043
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / -2
Query: 803 HQPQHVHVLSGLRRLQLH 750
HQ +HVH+L LRRLQLH
Sbjct: 101956 HQHEHVHLLPALRRLQLH 101903
Score = 33.1 bits (66), Expect(6) = 1e-043
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / -2
Query: 406 PQPAGGXHGRRARQERRLQGLAQH 335
P+ A HGRRA QER +QG A H
Sbjct: 101470 PERARRRHGRRAGQERPVQGRAPH 101399
Score = 31.8 bits (63), Expect(5) = 5e-055
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +1 / +3
Query: 751 *S*RRRSPESTCTC*GWW 804
*S*RRRS S CTC WW
Sbjct: 101904 *S*RRRSAGSRCTCSCWW 101957
Score = 25.4 bits (49), Expect(5) = 5e-055
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 101281 EHGVLVDGG 101307
>gb|AACV01010055.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010055, whole
genome shotgun sequence
Length = 22746
Score = 198 bits (427), Expect(4) = e-120
Identities = 78/108 (72%), Positives = 87/108 (80%)
Frame = -3 / +2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q+NYILGDNPKKMSYVVG+G KYPR +HHRGASTPHNG+KYSCTGGYKWRD+K ADPN+L
Sbjct: 12656 QVNYILGDNPKKMSYVVGYGKKYPRRLHHRGASTPHNGIKYSCTGGYKWRDTKGADPNVL 12835
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRGA 250
GAMVGGPDKND FKD+R T + GNAG LT+SGRGA
Sbjct: 12836 VGAMVGGPDKNDQFKDARLTYAQNEPTLVGNAGLVAALVALTNSGRGA 12979
Score = 136 bits (291), Expect(4) = 2e-077
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +2 / -1
Query: 335 VLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLL 514
V R SL SFLSGPPTMAP S GSA L+S HL PPVHEYL PLCGVDAP WC+ RGY L
Sbjct: 12894 VRRASLNWSFLSGPPTMAPTSTFGSAPLVSLHLYPPVHEYLMPLCGVDAPLWCSRRGYFL 12715
Query: 515 PNPTT*LIFLGLSPRM* 565
P PTT*LIF GLSPRM*
Sbjct: 12714 PYPTT*LIFFGLSPRM* 12664
Score = 133 bits (285), Expect(4) = e-120
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = -3 / +2
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGG+A FNHG+GQPLQY VANSFLAALYADYME+VNVPGWYCGP FMT +DLR FARSQ+
Sbjct: 12392 KGGLAQFNHGKGQPLQYTVANSFLAALYADYMESVNVPGWYCGPYFMTVDDLRSFARSQV 12571
Query: 567 NYI 559
I
Sbjct: 12572 RVI 12580
Score = 126 bits (269), Expect(4) = e-120
Identities = 51/77 (66%), Positives = 54/77 (70%)
Frame = -2 / +2
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
TD RLPK AK +ILDF VFSW LPGA+ RMFLNPGYPY SL GYHN TS+
Sbjct: 12167 TDPRLPKNAKAFYSILDFSVFSWDNKLPGAELLLSRLRMFLNPGYPYEESLIGYHNTTSM 12346
Query: 793 NMCMYFPGFAAFNFTXG 743
NMC YFP F AFNFT G
Sbjct: 12347 NMCTYFPRFGAFNFTKG 12397
Score = 100 bits (212), Expect(4) = 2e-077
Identities = 44/59 (74%), Positives = 46/59 (77%)
Frame = +1 / -3
Query: 571 LRPGELTEVVGGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAVVEERHPAL 747
LRPGE E+V GHEV AVPAGDVDGLHVVGVER E+GVGD VLQRL VVE R P L
Sbjct: 12568 LRPGEGAEIVDGHEVGAAVPAGDVDGLHVVGVERGEEGVGDGVLQRLALPVVELREPTL 12392
Score = 90.0 bits (190), Expect(5) = 5e-055
Identities = 43/67 (64%), Positives = 47/67 (70%)
Frame = +1 / -3
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG + V V L V PLV AGARVLDAVVRR R VV P VL A P+HVAHLL V+
Sbjct: 12856 PADHGADEHVRVGPLGVPPLVPAGARVLDAVVRRRRPPVVQPPRVLLAVPHHVAHLLRVI 12677
Query: 553 TENVVDL 573
+NVV L
Sbjct: 12676 PKNVVHL 12656
Score = 85.4 bits (180), Expect(5) = 5e-055
Identities = 37/58 (63%), Positives = 37/58 (63%)
Frame = +2 / -1
Query: 572 *DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
*DLA RRS VMK GPQYQPGTLT RKELAT YCSG P PWL A PP
Sbjct: 12567 *DLAKERRSSTVMK*GPQYQPGTLTDSM*SA*SAARKELATVYCSGWPFPWLNCASPP 12394
Score = 79.9 bits (168), Expect(4) = 2e-077
Identities = 41/75 (54%), Positives = 42/75 (56%)
Frame = +3 / -1
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNTXKSR 929
VKLKA K GK +HM LV LW P S S G*PGLRNM QL T KSR
Sbjct: 12390 VKLKAPKRGK*VHMFMLVVLWYPMSDSS*G*PGLRNMRSRDSSSSAPGSLLSQLKTEKSR 12211
Query: 930 MLXXXLAXLGSRXSV 974
ML LA LGSR SV
Sbjct: 12210 ML*KALAFLGSRGSV 12166
Score = 62.5 bits (130), Expect(6) = 1e-043
Identities = 29/44 (65%), Positives = 32/44 (72%)
Frame = -2 / +1
Query: 685 LLSRCALRRLHGGRQRPRLVLRSKLHDHQRPP*VRQVSDQLHSR 554
LL R ALRRLHG RQRPRLVLR LHD +R P +RQVS + R
Sbjct: 12454 LLPRRALRRLHGVRQRPRLVLRPLLHDRRRSPLLRQVSGTCNRR 12585
Score = 61.6 bits (128), Expect(5) = 5e-055
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = +2 / -3
Query: 863 QPRQQQLGARELXXPAEHXEVEDVXXXLGVLGQPXVG 973
+PRQQQLGAR+L PAE EVED LGVLGQP VG
Sbjct: 12277 EPRQQQLGARQLVVPAEDGEVEDAVEGLGVLGQPRVG 12167
Score = 51.0 bits (105), Expect(6) = 1e-043
Identities = 20/36 (55%), Positives = 20/36 (55%)
Frame = -3 / +3
Query: 972 PTXGCPXTPRXXXXXXXXXXSAGXXSSRAPSCCXRG 865
PT GCP TPR SAG S RAPSCC RG
Sbjct: 12168 PTRGCPRTPRPSTASSTSPSSAGTTSCRAPSCCCRG 12275
Score = 47.3 bits (97), Expect(6) = 1e-043
Identities = 22/47 (46%), Positives = 23/47 (48%)
Frame = -2 / +2
Query: 334 FGQNEPTLVXXXXXXXXXXXXXXXXXXXSVTAVDKNTMFSAVPHNVP 194
+ QNEPTLV VTAVDKNTMFSAVP P
Sbjct: 12896 YAQNEPTLVGNAGLVAALVALTNSGRGAGVTAVDKNTMFSAVPPMFP 13036
Score = 42.3 bits (86), Expect(6) = 1e-043
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = -2 / +1
Query: 568 QLHSR*QPQEDELRGWVRQQVPTARAP 488
+LHS P+EDELRG VRQ+VP A AP
Sbjct: 12661 ELHSWG*PEEDELRGGVRQEVPAAAAP 12741
Score = 36.3 bits (73), Expect(4) = e-120
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -1 / +1
Query: 248 RNRRRQEHHVLRRAA 204
R+RRRQEHHVLRRAA
Sbjct: 12982 RHRRRQEHHVLRRAA 13026
Score = 35.9 bits (72), Expect(6) = 1e-043
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 803 HQPQHVHVLSGLRRLQLH 750
HQ +HVH+L LRRLQLH
Sbjct: 12337 HQHEHVHLLPALRRLQLH 12390
Score = 35.9 bits (72), Expect(4) = 2e-077
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / -1
Query: 195 GTLCGTAENMVFLSTAVT 248
G + GTAENMVFLSTAVT
Sbjct: 13035 GNMGGTAENMVFLSTAVT 12982
Score = 33.1 bits (66), Expect(6) = 1e-043
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 406 PQPAGGXHGRRARQERRLQGLAQH 335
P+ A HGRRA QER +QG A H
Sbjct: 12823 PERARRRHGRRAGQERPVQGRAPH 12894
Score = 31.8 bits (63), Expect(5) = 5e-055
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +1 / -2
Query: 751 *S*RRRSPESTCTC*GWW 804
*S*RRRS S CTC WW
Sbjct: 12389 *S*RRRSAGSRCTCSCWW 12336
Score = 25.4 bits (49), Expect(5) = 5e-055
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 218 EHGVLVDGG 244
EHGVLVDGG
Sbjct: 13012 EHGVLVDGG 12986
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 198 bits (427), Expect(3) = e-114
Identities = 78/108 (72%), Positives = 87/108 (80%)
Frame = -3 / -2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q+NYILGDNPKKMSYVVG+G KYPR +HHRGASTPHNG+KYSCTGGYKWRD+K ADPN+L
Sbjct: 24839921 QVNYILGDNPKKMSYVVGYGKKYPRRLHHRGASTPHNGIKYSCTGGYKWRDTKGADPNVL 24839742
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRGA 250
GAMVGGPDKND FKD+R T + GNAG LT+SGRGA
Sbjct: 24839741 VGAMVGGPDKNDQFKDARLTYAQNEPTLVGNAGLVAALVALTNSGRGA 24839598
Score = 136 bits (291), Expect = 5e-030
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +2 / +1
Query: 335 VLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLL 514
V R SL SFLSGPPTMAP S GSA L+S HL PPVHEYL PLCGVDAP WC+ RGY L
Sbjct: 24839683 VRRASLNWSFLSGPPTMAPTSTFGSAPLVSLHLYPPVHEYLMPLCGVDAPLWCSRRGYFL 24839862
Query: 515 PNPTT*LIFLGLSPRM* 565
P PTT*LIF GLSPRM*
Sbjct: 24839863 PYPTT*LIFFGLSPRM* 24839913
Score = 133 bits (285), Expect(3) = e-114
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = -3 / -2
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGG+A FNHG+GQPLQY VANSFLAALYADYME+VNVPGWYCGP FMT +DLR FARSQ+
Sbjct: 24840185 KGGLAQFNHGKGQPLQYTVANSFLAALYADYMESVNVPGWYCGPYFMTVDDLRSFARSQV 24840006
Query: 567 NYI 559
I
Sbjct: 24840005 RVI 24839997
Score = 126 bits (269), Expect(3) = e-114
Identities = 51/77 (66%), Positives = 54/77 (70%)
Frame = -2 / -2
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
TD RLPK AK +ILDF VFSW LPGA+ RMFLNPGYPY SL GYHN TS+
Sbjct: 24840410 TDPRLPKNAKAFYSILDFSVFSWDNKLPGAELLLSRLRMFLNPGYPYEESLIGYHNTTSM 24840231
Query: 793 NMCMYFPGFAAFNFTXG 743
NMC YFP F AFNFT G
Sbjct: 24840230 NMCTYFPRFGAFNFTKG 24840180
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 198 bits (427), Expect(3) = e-114
Identities = 78/108 (72%), Positives = 87/108 (80%)
Frame = -3 / -2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q+NYILGDNPKKMSYVVG+G KYPR +HHRGASTPHNG+KYSCTGGYKWRD+K ADPN+L
Sbjct: 21903375 QVNYILGDNPKKMSYVVGYGKKYPRRLHHRGASTPHNGIKYSCTGGYKWRDTKGADPNVL 21903196
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRGA 250
GAMVGGPDKND FKD+R T + GNAG LT+SGRGA
Sbjct: 21903195 VGAMVGGPDKNDQFKDARLTYAQNEPTLVGNAGLVAALVALTNSGRGA 21903052
Score = 136 bits (291), Expect = 5e-030
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +2 / +2
Query: 335 VLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLL 514
V R SL SFLSGPPTMAP S GSA L+S HL PPVHEYL PLCGVDAP WC+ RGY L
Sbjct: 21903137 VRRASLNWSFLSGPPTMAPTSTFGSAPLVSLHLYPPVHEYLMPLCGVDAPLWCSRRGYFL 21903316
Query: 515 PNPTT*LIFLGLSPRM* 565
P PTT*LIF GLSPRM*
Sbjct: 21903317 PYPTT*LIFFGLSPRM* 21903367
Score = 133 bits (285), Expect(3) = e-114
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = -3 / -2
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGG+A FNHG+GQPLQY VANSFLAALYADYME+VNVPGWYCGP FMT +DLR FARSQ+
Sbjct: 21903639 KGGLAQFNHGKGQPLQYTVANSFLAALYADYMESVNVPGWYCGPYFMTVDDLRSFARSQV 21903460
Query: 567 NYI 559
I
Sbjct: 21903459 RVI 21903451
Score = 126 bits (269), Expect(3) = e-114
Identities = 51/77 (66%), Positives = 54/77 (70%)
Frame = -2 / -2
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
TD RLPK AK +ILDF VFSW LPGA+ RMFLNPGYPY SL GYHN TS+
Sbjct: 21903864 TDPRLPKNAKAFYSILDFSVFSWDNKLPGAELLLSRLRMFLNPGYPYEESLIGYHNTTSM 21903685
Query: 793 NMCMYFPGFAAFNFTXG 743
NMC YFP F AFNFT G
Sbjct: 21903684 NMCTYFPRFGAFNFTKG 21903634
>dbj|AK070408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054M04, full
insert sequence
Length = 2397
Score = 258 bits (558), Expect(3) = 2e-085
Identities = 99/161 (61%), Positives = 121/161 (75%)
Frame = -3 / +2
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 1490 KGGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQL 1669
Query: 567 NYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGG 388
+Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L G
Sbjct: 1670 DYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNILIG 1849
Query: 387 AMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
A+V GPD++DGFKD R T + NAG LT+
Sbjct: 1850 ALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 1972
Score = 154 bits (330), Expect(3) = 2e-038
Identities = 76/136 (55%), Positives = 81/136 (59%)
Frame = +2 / -1
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 1899 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 1720
Query: 518 NPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATT 697
PTT*LIF G PR * DLAN RR+ VV K GPQY PG RK TT
Sbjct: 1719 KPTT*LIFSGFLPRT*SSCDLANLRRTSVV*KVGPQYHPGVSAASR*SLYREARKAALTT 1540
Query: 698 YCSGCPLPWLKSAIPP 745
Y SG LPWL IPP
Sbjct: 1539 Y*SG*GLPWLSCIIPP 1492
Score = 73.9 bits (155), Expect(3) = 2e-085
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = -2 / +2
Query: 925 DFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTX 746
++ VF+W LPGAQ R+FL+PGYPY L +HN T MC Y P + +FNFT
Sbjct: 1313 NYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPMYNSFNFTK 1492
Query: 745 G 743
G
Sbjct: 1493 G 1495
Score = 27.6 bits (54), Expect(3) = 2e-085
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +2
Query: 244 TAVDKNTMFSAVPHNVP 194
+ +DKNT+FSAVP P
Sbjct: 1985 SGIDKNTIFSAVPPMFP 2035
Score = 24.9 bits (48), Expect(3) = 2e-038
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / -1
Query: 195 GTLCGTAENMVFLS 236
G + GTAE MVFLS
Sbjct: 2034 GNIGGTAEKMVFLS 1993
Score = 23.1 bits (44), Expect(3) = 2e-038
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3 / -1
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLR 854
VKL G+Y H+ V L S S G PGLR
Sbjct: 1488 VKLNELYIGRYEHITLSVWL*NVLSISS*GYPGLR 1384
>ref|XM_469632.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2313
Score = 258 bits (558), Expect(3) = 2e-085
Identities = 99/161 (61%), Positives = 121/161 (75%)
Frame = -3 / +3
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 1389 KGGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQL 1568
Query: 567 NYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGG 388
+Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L G
Sbjct: 1569 DYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNILIG 1748
Query: 387 AMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
A+V GPD++DGFKD R T + NAG LT+
Sbjct: 1749 ALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 1871
Score = 154 bits (330), Expect(3) = 2e-038
Identities = 76/136 (55%), Positives = 81/136 (59%)
Frame = +2 / -3
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 1798 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 1619
Query: 518 NPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATT 697
PTT*LIF G PR * DLAN RR+ VV K GPQY PG RK TT
Sbjct: 1618 KPTT*LIFSGFLPRT*SSCDLANLRRTSVV*KVGPQYHPGVSAASR*SLYREARKAALTT 1439
Query: 698 YCSGCPLPWLKSAIPP 745
Y SG LPWL IPP
Sbjct: 1438 Y*SG*GLPWLSCIIPP 1391
Score = 73.9 bits (155), Expect(3) = 2e-085
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = -2 / +3
Query: 925 DFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTX 746
++ VF+W LPGAQ R+FL+PGYPY L +HN T MC Y P + +FNFT
Sbjct: 1212 NYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPMYNSFNFTK 1391
Query: 745 G 743
G
Sbjct: 1392 G 1394
Score = 27.6 bits (54), Expect(3) = 2e-085
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +3
Query: 244 TAVDKNTMFSAVPHNVP 194
+ +DKNT+FSAVP P
Sbjct: 1884 SGIDKNTIFSAVPPMFP 1934
Score = 24.9 bits (48), Expect(3) = 2e-038
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / -3
Query: 195 GTLCGTAENMVFLS 236
G + GTAE MVFLS
Sbjct: 1933 GNIGGTAEKMVFLS 1892
Score = 23.1 bits (44), Expect(3) = 2e-038
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3 / -3
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLR 854
VKL G+Y H+ V L S S G PGLR
Sbjct: 1387 VKLNELYIGRYEHITLSVWL*NVLSISS*GYPGLR 1283
>dbj|AK104929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D09, full
insert sequence
Length = 1963
Score = 258 bits (558), Expect(3) = 2e-085
Identities = 99/161 (61%), Positives = 121/161 (75%)
Frame = -3 / +3
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 1065 KGGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQL 1244
Query: 567 NYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGG 388
+Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L G
Sbjct: 1245 DYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNILIG 1424
Query: 387 AMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
A+V GPD++DGFKD R T + NAG LT+
Sbjct: 1425 ALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 1547
Score = 154 bits (330), Expect(3) = 2e-038
Identities = 76/136 (55%), Positives = 81/136 (59%)
Frame = +2 / -1
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 1474 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 1295
Query: 518 NPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATT 697
PTT*LIF G PR * DLAN RR+ VV K GPQY PG RK TT
Sbjct: 1294 KPTT*LIFSGFLPRT*SSCDLANLRRTSVV*KVGPQYHPGVSAASR*SLYREARKAALTT 1115
Query: 698 YCSGCPLPWLKSAIPP 745
Y SG LPWL IPP
Sbjct: 1114 Y*SG*GLPWLSCIIPP 1067
Score = 73.9 bits (155), Expect(3) = 2e-085
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = -2 / +3
Query: 925 DFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTX 746
++ VF+W LPGAQ R+FL+PGYPY L +HN T MC Y P + +FNFT
Sbjct: 888 NYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPMYNSFNFTK 1067
Query: 745 G 743
G
Sbjct: 1068 G 1070
Score = 27.6 bits (54), Expect(3) = 2e-085
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +3
Query: 244 TAVDKNTMFSAVPHNVP 194
+ +DKNT+FSAVP P
Sbjct: 1560 SGIDKNTIFSAVPPMFP 1610
Score = 24.9 bits (48), Expect(3) = 2e-038
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / -1
Query: 195 GTLCGTAENMVFLS 236
G + GTAE MVFLS
Sbjct: 1609 GNIGGTAEKMVFLS 1568
Score = 23.1 bits (44), Expect(3) = 2e-038
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3 / -1
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLR 854
VKL G+Y H+ V L S S G PGLR
Sbjct: 1063 VKLNELYIGRYEHITLSVWL*NVLSISS*GYPGLR 959
>dbj|AK102748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K04, full
insert sequence
Length = 2189
Score = 252 bits (544), Expect(3) = 9e-085
Identities = 97/165 (58%), Positives = 118/165 (71%)
Frame = -3 / +1
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGG+ NHGR QPLQYVV +FLA+LY DY+EA + PGWYCGP+F LR FAR+QI
Sbjct: 1393 KGGLIQLNHGRPQPLQYVVNAAFLASLYGDYLEAADTPGWYCGPHFYPIETLRNFARTQI 1572
Query: 567 NYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGG 388
YILG NP KMSYVVG+G++YP+ VHHRGAS P NGV Y C GG+KWR++KK +PN++ G
Sbjct: 1573 EYILGKNPLKMSYVVGYGNRYPKRVHHRGASIPKNGVHYGCKGGWKWRETKKPNPNIIVG 1752
Query: 387 AMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
AMV GPD++DGFKD R T +GNAG L+ G G
Sbjct: 1753 AMVAGPDRHDGFKDVRKNYNYTEATLAGNAGLVAALVALSGEGHG 1887
Score = 119 bits (255), Expect(3) = 2e-033
Identities = 64/136 (47%), Positives = 73/136 (53%)
Frame = +2 / -1
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
LR SLKPS+ SGP T+AP LG FL+S H PP+ TP G++APR T G P
Sbjct: 1802 LRTSLKPSWRSGPATIAPTMMLGFGFLVSLHFQPPLQP*WTPFFGIEAPR**TRLG*RFP 1623
Query: 518 NPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATT 697
PTT*LIF G P+M I* LA RR + K+GPQYQPG R TT
Sbjct: 1622 *PTT*LIFKGFFPKMYSI*VLAKLRRVSIG*KWGPQYQPGVSAASR*SPYKEARNAAFTT 1443
Query: 698 YCSGCPLPWLKSAIPP 745
Y GC LP PP
Sbjct: 1442 Y*RGCGLP*FNWIKPP 1395
Score = 76.7 bits (161), Expect(3) = 9e-085
Identities = 35/77 (45%), Positives = 42/77 (54%)
Frame = -2 / +1
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSL 794
T +L K A D+ VFSW L GAQ R+FL+PGYPY L +HN TS+
Sbjct: 1168 THPKLAKHAGAYWGGPDYGVFSWDNKLTGAQVLLSRLRLFLSPGYPYEEILRTFHNQTSI 1347
Query: 793 NMCMYFPGFAAFNFTXG 743
MC Y P F +FN T G
Sbjct: 1348 IMCSYLPIFKSFNRTKG 1398
Score = 37.3 bits (75), Expect(3) = 2e-033
Identities = 21/56 (37%), Positives = 25/56 (44%)
Frame = +3 / -1
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLRNMXXXXXXXXXXXXXXXQLNT 917
V LK K G+ H++ LV LW SYG*PGL+ QLNT
Sbjct: 1391 VLLKDLKIGR*EHIIMLV*LWNVLRISSYG*PGLKKSLNRLKRTCAPVSLLSQLNT 1224
Score = 29.5 bits (58), Expect(3) = 9e-085
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 238 VDKNTMFSAVPHNVP 194
VDKNTMFSAVP P
Sbjct: 1888 VDKNTMFSAVPPMFP 1932
Score = 28.1 bits (55), Expect(3) = 2e-033
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / -1
Query: 195 GTLCGTAENMVFLST 239
G + GTAEN+VFLST
Sbjct: 1931 GNIGGTAENIVFLST 1887
>gb|AU173081.1|AU173081 AU173081 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0330, mRNA sequence
Length = 450
Score = 305 bits (661), Expect = 5e-081
Identities = 116/138 (84%), Positives = 127/138 (92%)
Frame = -3 / +3
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGG+A FNHG+GQPLQY VANSFLAALYADYME+VNVPGWYCGP FMT +DLR FARSQ+
Sbjct: 18 KGGLAQFNHGKGQPLQYTVANSFLAALYADYMESVNVPGWYCGPYFMTVDDLRSFARSQV 197
Query: 567 NYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGG 388
NYILGDNPKKMSYVVG+G KYPR +HHRGASTPHNG+KYSCTGGYKWRD+K ADPN+L G
Sbjct: 198 NYILGDNPKKMSYVVGYGKKYPRRLHHRGASTPHNGIKYSCTGGYKWRDTKGADPNVLVG 377
Query: 387 AMVGGPDKNDGFKDSRNT 334
AMVGGPDKND FKD+R T
Sbjct: 378 AMVGGPDKNDQFKDARLT 431
Score = 218 bits (470), Expect = 1e-054
Identities = 96/137 (70%), Positives = 98/137 (71%)
Frame = +2 / -3
Query: 335 VLRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLL 514
V R SL SFLSGPPTMAP S GSA L+S HL PPVHEYL PLCGVDAP WC+ RGY L
Sbjct: 430 VRRASLNWSFLSGPPTMAPTSTFGSAPLVSLHLYPPVHEYLMPLCGVDAPLWCSRRGYFL 251
Query: 515 PNPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELAT 694
P PTT*LIF GLSPRM* *DLA RRS VMK GPQYQPGTLT RKELAT
Sbjct: 250 PYPTT*LIFFGLSPRM*FT*DLAKERRSSTVMK*GPQYQPGTLTDSM*SA*SAARKELAT 71
Query: 695 TYCSGCPLPWLKSAIPP 745
YCSG P PWL A PP
Sbjct: 70 VYCSGWPFPWLNCASPP 20
Score = 185 bits (398), Expect = 9e-045
Identities = 86/125 (68%), Positives = 92/125 (73%)
Frame = +1 / -2
Query: 373 PADHGXPQQVGVRFLAVAPLVAAGARVLDAVVRRGRATVVHVPWVLAAEPNHVAHLLGVV 552
PADHG + V V L V PLV AGARVLDAVVRR R VV P VL A P+HVAHLL V+
Sbjct: 392 PADHGADEHVRVGPLGVPPLVPAGARVLDAVVRRRRPPVVQPPRVLLAVPHHVAHLLRVI 213
Query: 553 TENVVDLRPGELTEVVGGHEVWTAVPAGDVDGLHVVGVERSEKGVGDDVLQRLPPAVVEE 732
+NVV LRPGE E+V GHEV AVPAGDVDGLHVVGVER E+GVGD VLQRL VVE
Sbjct: 212 PKNVVHLRPGEGAEIVDGHEVGAAVPAGDVDGLHVVGVERGEEGVGDGVLQRLALPVVEL 33
Query: 733 RHPAL 747
R P L
Sbjct: 32 REPTL 18
Score = 100 bits (213), Expect(2) = 2e-023
Identities = 46/66 (69%), Positives = 51/66 (77%)
Frame = -2 / +2
Query: 685 LLSRCALRRLHGGRQRPRLVLRSKLHDHQRPP*VRQVSDQLHSR*QPQEDELRGWVRQQV 506
LL R ALRRLHG RQRPRLVLR LHD +R P +RQVS +LHS P+EDELRG VRQ+V
Sbjct: 80 LLPRRALRRLHGVRQRPRLVLRPLLHDRRRSPLLRQVSGELHSWG*PEEDELRGGVRQEV 259
Query: 505 PTARAP 488
P A AP
Sbjct: 260 PAAAAP 277
Score = 33.1 bits (66), Expect(2) = 2e-023
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 406 PQPAGGXHGRRARQERRLQGLAQH 335
P+ A HGRRA QER +QG A H
Sbjct: 359 PERARRRHGRRAGQERPVQGRAPH 430
>gb|CB644827.1|CB644827 OSJNEb06D08.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06D08 5', mRNA sequence
Length = 866
Score = 229 bits (494), Expect(2) = 5e-074
Identities = 85/126 (67%), Positives = 103/126 (81%)
Frame = -3 / +2
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 488 KGGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQL 667
Query: 567 NYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGG 388
+Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+ WR++KK +PN+L G
Sbjct: 668 DYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGF*WRETKKPNPNILIG 847
Query: 387 AMVGGP 370
A+V GP
Sbjct: 848 ALVAGP 865
Score = 134 bits (287), Expect(2) = 2e-030
Identities = 67/125 (53%), Positives = 71/125 (56%)
Frame = +2 / -3
Query: 371 GPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLPNPTT*LIFLGL 550
GP T AP LG FL+S H PP+H YLTPL G+DAP GYL P PTT*LIF G
Sbjct: 864 GPATSAPIRILGLGFLVSLH*KPPLHPYLTPL*GIDAPL**ARLGYLFPKPTT*LIFSGF 685
Query: 551 SPRM*LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLK 730
PR * DLAN RR+ VV K GPQY PG RK TTY SG LPWL
Sbjct: 684 LPRT*SSCDLANLRRTSVV*KVGPQYHPGVSAASR*SLYREARKAALTTY*SG*GLPWLS 505
Query: 731 SAIPP 745
IPP
Sbjct: 504 CIIPP 490
Score = 73.9 bits (155), Expect(2) = 5e-074
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = -2 / +2
Query: 925 DFXVFSWXXXLPGAQXXXXXXRMFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTX 746
++ VF+W LPGAQ R+FL+PGYPY L +HN T MC Y P + +FNFT
Sbjct: 311 NYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPMYNSFNFTK 490
Query: 745 G 743
G
Sbjct: 491 G 493
Score = 23.1 bits (44), Expect(2) = 2e-030
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3 / -3
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLR 854
VKL G+Y H+ V L S S G PGLR
Sbjct: 486 VKLNELYIGRYEHITLSVWL*NVLSISS*GYPGLR 382
>gb|AACV01006539.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006539, whole
genome shotgun sequence
Length = 40585
Score = 158 bits (340), Expect(5) = 2e-068
Identities = 61/107 (57%), Positives = 75/107 (70%)
Frame = -3 / -1
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QI YILG NP KMSYVVG+G++YP+ VHHRGAS P NGV Y C GG+KWR++KK +PN++
Sbjct: 6637 QIEYILGKNPLKMSYVVGYGNRYPKRVHHRGASIPKNGVHYGCKGGWKWRETKKPNPNII 6458
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMV GPD++DGFKD R T +GNAG L+ G G
Sbjct: 6457 VGAMVAGPDRHDGFKDVRKNYNYTEATLAGNAGLVAALVALSGEGHG 6317
Score = 97.7 bits (207), Expect(5) = 2e-068
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = -3 / -2
Query: 744 GGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
GG+ NHGR QPLQYVV +FLA+LY DY+EA + PGWYCGP+F LR FAR+Q+
Sbjct: 6891 GGLIQLNHGRPQPLQYVVNAAFLASLYGDYLEAADTPGWYCGPHFYPIETLRNFARTQV 6715
Score = 82.6 bits (174), Expect(3) = 8e-024
Identities = 40/75 (53%), Positives = 47/75 (62%)
Frame = +2 / +3
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
LR SLKPS+ SGP T+AP LG FL+S H PP+ TP G++APR T G P
Sbjct: 6402 LRTSLKPSWRSGPATIAPTMMLGFGFLVSLHFQPPLQP*WTPFFGIEAPR**TRLG*RFP 6581
Query: 518 NPTT*LIFLGLSPRM 562
PTT*LIF G P+M
Sbjct: 6582 *PTT*LIFKGFFPKM 6626
Score = 56.1 bits (116), Expect(5) = 2e-068
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = -2 / -1
Query: 859 MFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTXG 743
+FL+PGYPY L +HN TS+ MC Y P F +FN T G
Sbjct: 7432 LFLSPGYPYEEILRTFHNQTSIIMCSYLPIFKSFNRTKG 7316
Score = 41.8 bits (85), Expect(3) = 8e-024
Identities = 22/56 (39%), Positives = 24/56 (42%)
Frame = +2 / +2
Query: 578 LANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
LA RR + K+GPQYQPG R TTY GC LP PP
Sbjct: 6725 LAKLRRVSIG*KWGPQYQPGVSAASR*SPYKEARNAAFTTY*RGCGLP*FNWIKPP 6892
Score = 29.5 bits (58), Expect(5) = 2e-068
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 238 VDKNTMFSAVPHNVP 194
VDKNTMFSAVP P
Sbjct: 6316 VDKNTMFSAVPPMFP 6272
Score = 28.1 bits (55), Expect(3) = 8e-024
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / +3
Query: 195 GTLCGTAENMVFLST 239
G + GTAEN+VFLST
Sbjct: 6273 GNIGGTAENIVFLST 6317
Score = 26.3 bits (51), Expect(5) = 2e-068
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2 / -3
Query: 973 TDXRLPKXAKXXXNILDFXVFSWXXXLPGAQ 881
T +L K A D+ VFSW L GAQ
Sbjct: 8438 THPKLAKHAGAYWGGPDYGVFSWDNKLTGAQ 8346
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0052J20, complete sequence
Length = 144969
Score = 158 bits (340), Expect(4) = 4e-066
Identities = 61/107 (57%), Positives = 75/107 (70%)
Frame = -3 / -2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QI YILG NP KMSYVVG+G++YP+ VHHRGAS P NGV Y C GG+KWR++KK +PN++
Sbjct: 98435 QIEYILGKNPLKMSYVVGYGNRYPKRVHHRGASIPKNGVHYGCKGGWKWRETKKPNPNII 98256
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMV GPD++DGFKD R T +GNAG L+ G G
Sbjct: 98255 VGAMVAGPDRHDGFKDVRKNYNYTEATLAGNAGLVAALVALSGEGHG 98115
Score = 97.7 bits (207), Expect(4) = 4e-066
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = -3 / -3
Query: 744 GGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
GG+ NHGR QPLQYVV +FLA+LY DY+EA + PGWYCGP+F LR FAR+Q+
Sbjct: 98689 GGLIQLNHGRPQPLQYVVNAAFLASLYGDYLEAADTPGWYCGPHFYPIETLRNFARTQV 98513
Score = 82.6 bits (174), Expect(3) = 8e-024
Identities = 40/75 (53%), Positives = 47/75 (62%)
Frame = +2 / +1
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
LR SLKPS+ SGP T+AP LG FL+S H PP+ TP G++APR T G P
Sbjct: 98200 LRTSLKPSWRSGPATIAPTMMLGFGFLVSLHFQPPLQP*WTPFFGIEAPR**TRLG*RFP 98379
Query: 518 NPTT*LIFLGLSPRM 562
PTT*LIF G P+M
Sbjct: 98380 *PTT*LIFKGFFPKM 98424
Score = 56.1 bits (116), Expect(4) = 4e-066
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = -2 / -2
Query: 859 MFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTXG 743
+FL+PGYPY L +HN TS+ MC Y P F +FN T G
Sbjct: 99230 LFLSPGYPYEEILRTFHNQTSIIMCSYLPIFKSFNRTKG 99114
Score = 41.8 bits (85), Expect(3) = 8e-024
Identities = 22/56 (39%), Positives = 24/56 (42%)
Frame = +2 / +3
Query: 578 LANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
LA RR + K+GPQYQPG R TTY GC LP PP
Sbjct: 98523 LAKLRRVSIG*KWGPQYQPGVSAASR*SPYKEARNAAFTTY*RGCGLP*FNWIKPP 98690
Score = 29.5 bits (58), Expect(4) = 4e-066
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 238 VDKNTMFSAVPHNVP 194
VDKNTMFSAVP P
Sbjct: 98114 VDKNTMFSAVPPMFP 98070
Score = 28.1 bits (55), Expect(3) = 8e-024
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 195 GTLCGTAENMVFLST 239
G + GTAEN+VFLST
Sbjct: 98071 GNIGGTAENIVFLST 98115
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 158 bits (340), Expect(3) = 3e-063
Identities = 61/107 (57%), Positives = 75/107 (70%)
Frame = -3 / -2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QI YILG NP KMSYVVG+G++YP+ VHHRGAS P NGV Y C GG+KWR++KK +PN++
Sbjct: 12173846 QIEYILGKNPLKMSYVVGYGNRYPKRVHHRGASIPKNGVHYGCKGGWKWRETKKPNPNII 12173667
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMV GPD++DGFKD R T +GNAG L+ G G
Sbjct: 12173666 VGAMVAGPDRHDGFKDVRKNYNYTEATLAGNAGLVAALVALSGEGHG 12173526
Score = 97.7 bits (207), Expect(3) = 3e-063
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = -3 / -3
Query: 744 GGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
GG+ NHGR QPLQYVV +FLA+LY DY+EA + PGWYCGP+F LR FAR+Q+
Sbjct: 12174100 GGLIQLNHGRPQPLQYVVNAAFLASLYGDYLEAADTPGWYCGPHFYPIETLRNFARTQV 12173924
Score = 82.6 bits (174), Expect(3) = 7e-024
Identities = 40/75 (53%), Positives = 47/75 (62%)
Frame = +2 / +1
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
LR SLKPS+ SGP T+AP LG FL+S H PP+ TP G++APR T G P
Sbjct: 12173611 LRTSLKPSWRSGPATIAPTMMLGFGFLVSLHFQPPLQP*WTPFFGIEAPR**TRLG*RFP 12173790
Query: 518 NPTT*LIFLGLSPRM 562
PTT*LIF G P+M
Sbjct: 12173791 *PTT*LIFKGFFPKM 12173835
Score = 41.8 bits (85), Expect(3) = 7e-024
Identities = 22/56 (39%), Positives = 24/56 (42%)
Frame = +2 / +3
Query: 578 LANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
LA RR + K+GPQYQPG R TTY GC LP PP
Sbjct: 12173934 LAKLRRVSIG*KWGPQYQPGVSAASR*SPYKEARNAAFTTY*RGCGLP*FNWIKPP 12174101
Score = 29.5 bits (58), Expect(3) = 3e-063
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 238 VDKNTMFSAVPHNVP 194
VDKNTMFSAVP P
Sbjct: 12173525 VDKNTMFSAVPPMFP 12173481
Score = 28.1 bits (55), Expect(3) = 7e-024
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 195 GTLCGTAENMVFLST 239
G + GTAEN+VFLST
Sbjct: 12173482 GNIGGTAENIVFLST 12173526
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 158 bits (340), Expect(3) = 3e-063
Identities = 61/107 (57%), Positives = 75/107 (70%)
Frame = -3 / -2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QI YILG NP KMSYVVG+G++YP+ VHHRGAS P NGV Y C GG+KWR++KK +PN++
Sbjct: 3420115 QIEYILGKNPLKMSYVVGYGNRYPKRVHHRGASIPKNGVHYGCKGGWKWRETKKPNPNII 3419936
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMV GPD++DGFKD R T +GNAG L+ G G
Sbjct: 3419935 VGAMVAGPDRHDGFKDVRKNYNYTEATLAGNAGLVAALVALSGEGHG 3419795
Score = 97.7 bits (207), Expect(3) = 3e-063
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = -3 / -3
Query: 744 GGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
GG+ NHGR QPLQYVV +FLA+LY DY+EA + PGWYCGP+F LR FAR+Q+
Sbjct: 3420369 GGLIQLNHGRPQPLQYVVNAAFLASLYGDYLEAADTPGWYCGPHFYPIETLRNFARTQV 3420193
Score = 82.6 bits (174), Expect(3) = 7e-024
Identities = 40/75 (53%), Positives = 47/75 (62%)
Frame = +2 / +3
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
LR SLKPS+ SGP T+AP LG FL+S H PP+ TP G++APR T G P
Sbjct: 3419880 LRTSLKPSWRSGPATIAPTMMLGFGFLVSLHFQPPLQP*WTPFFGIEAPR**TRLG*RFP 3420059
Query: 518 NPTT*LIFLGLSPRM 562
PTT*LIF G P+M
Sbjct: 3420060 *PTT*LIFKGFFPKM 3420104
Score = 41.8 bits (85), Expect(3) = 7e-024
Identities = 22/56 (39%), Positives = 24/56 (42%)
Frame = +2 / +2
Query: 578 LANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
LA RR + K+GPQYQPG R TTY GC LP PP
Sbjct: 3420203 LAKLRRVSIG*KWGPQYQPGVSAASR*SPYKEARNAAFTTY*RGCGLP*FNWIKPP 3420370
Score = 29.5 bits (58), Expect(3) = 3e-063
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 238 VDKNTMFSAVPHNVP 194
VDKNTMFSAVP P
Sbjct: 3419794 VDKNTMFSAVPPMFP 3419750
Score = 28.1 bits (55), Expect(3) = 7e-024
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / +3
Query: 195 GTLCGTAENMVFLST 239
G + GTAEN+VFLST
Sbjct: 3419751 GNIGGTAENIVFLST 3419795
>gb|CB664661.1|CB664661 OSJNEd10I06.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd10I06 3', mRNA sequence
Length = 825
Score = 232 bits (500), Expect(2) = 6e-061
Identities = 88/146 (60%), Positives = 110/146 (75%)
Frame = -3 / -1
Query: 702 QYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNPKKMSYVV 523
QYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ++Y+LG NP KMSYVV
Sbjct: 825 QYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQLDYVLGKNPLKMSYVV 646
Query: 522 GFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDS 343
GFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L GA+V GPD++DGFKD
Sbjct: 645 GFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNILIGALVAGPDRHDGFKDV 466
Query: 342 RNTSGRTSRRWSGNAGXXXXXXXLTS 265
R T + NAG LT+
Sbjct: 465 RTNYNYTEPTLAANAGLVAALISLTN 388
Score = 134 bits (288), Expect(2) = 4e-031
Identities = 67/121 (55%), Positives = 72/121 (59%)
Frame = +2 / +2
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 461 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 640
Query: 518 NPTT*LIFLGLSPRM*LI*DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATT 697
PTT*LIF G PR * DLAN RR+ VV K GPQY PG RK TT
Sbjct: 641 KPTT*LIFSGFLPRT*SSCDLANLRRTSVV*KVGPQYHPGVSAASR*SLYREARKAALTT 820
Query: 698 Y 700
Y
Sbjct: 821 Y 823
Score = 27.6 bits (54), Expect(2) = 6e-061
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 244 TAVDKNTMFSAVPHNVP 194
+ +DKNT+FSAVP P
Sbjct: 375 SGIDKNTIFSAVPPMFP 325
Score = 24.9 bits (48), Expect(2) = 4e-031
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 195 GTLCGTAENMVFLS 236
G + GTAE MVFLS
Sbjct: 326 GNIGGTAEKMVFLS 367
>gb|AACV01007878.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007878, whole
genome shotgun sequence
Length = 25339
Score = 158 bits (340), Expect(3) = 3e-046
Identities = 60/103 (58%), Positives = 75/103 (72%)
Frame = -3 / -2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L
Sbjct: 5166 QLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNIL 4987
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 4986 IGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 4858
Score = 107 bits (228), Expect = 2e-021
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = -3 / -2
Query: 744 GGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQIN 565
GGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 5427 GGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQVR 5248
Query: 564 YILGDNPKKMSYV 526
+ + SY+
Sbjct: 5247 FCCPCS*SSQSYI 5209
Score = 99.1 bits (210), Expect(4) = 4e-035
Identities = 46/74 (62%), Positives = 50/74 (67%)
Frame = +2 / +2
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 4931 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 5110
Query: 518 NPTT*LIFLGLSPR 559
PTT*LIF G PR
Sbjct: 5111 KPTT*LIFSGFLPR 5152
Score = 61.6 bits (128), Expect(4) = 4e-035
Identities = 29/57 (50%), Positives = 30/57 (52%)
Frame = +2 / +2
Query: 575 DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
DLAN RR+ VV K GPQY PG RK TTY SG LPWL IPP
Sbjct: 5258 DLANLRRTSVV*KVGPQYHPGVSAASR*SLYREARKAALTTY*SG*GLPWLSCIIPP 5428
Score = 57.0 bits (118), Expect(3) = 3e-046
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = -2 / -3
Query: 859 MFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTXGR 740
+FL+PGYPY L +HN T MC Y P + +FNFT GR
Sbjct: 5618 LFLSPGYPYEEILRTFHNQTDNVMCSYLPMYNSFNFTKGR 5499
Score = 27.6 bits (54), Expect(3) = 3e-046
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / -2
Query: 244 TAVDKNTMFSAVPHNVP 194
+ +DKNT+FSAVP P
Sbjct: 4845 SGIDKNTIFSAVPPMFP 4795
Score = 24.9 bits (48), Expect(4) = 4e-035
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 195 GTLCGTAENMVFLS 236
G + GTAE MVFLS
Sbjct: 4796 GNIGGTAEKMVFLS 4837
Score = 23.1 bits (44), Expect(4) = 4e-035
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3 / +1
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLR 854
VKL G+Y H+ V L S S G PGLR
Sbjct: 5509 VKLNELYIGRYEHITLSVWL*NVLSISS*GYPGLR 5613
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
sequence
Length = 139946
Score = 158 bits (340), Expect(3) = 9e-045
Identities = 60/103 (58%), Positives = 75/103 (72%)
Frame = -3 / -2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L
Sbjct: 56068 QLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNIL 55889
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 55888 IGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 55760
Score = 107 bits (228), Expect = 2e-021
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = -3 / -2
Query: 744 GGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQIN 565
GGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 56329 GGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQVR 56150
Query: 564 YILGDNPKKMSYV 526
+ + SY+
Sbjct: 56149 FCCPCS*SSQSYI 56111
Score = 99.1 bits (210), Expect(4) = 4e-035
Identities = 46/74 (62%), Positives = 50/74 (67%)
Frame = +2 / +3
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 55833 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 56012
Query: 518 NPTT*LIFLGLSPR 559
PTT*LIF G PR
Sbjct: 56013 KPTT*LIFSGFLPR 56054
Score = 61.6 bits (128), Expect(4) = 4e-035
Identities = 29/57 (50%), Positives = 30/57 (52%)
Frame = +2 / +3
Query: 575 DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
DLAN RR+ VV K GPQY PG RK TTY SG LPWL IPP
Sbjct: 56160 DLANLRRTSVV*KVGPQYHPGVSAASR*SLYREARKAALTTY*SG*GLPWLSCIIPP 56330
Score = 57.0 bits (118), Expect(3) = 9e-045
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = -2 / -3
Query: 859 MFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTXGR 740
+FL+PGYPY L +HN T MC Y P + +FNFT GR
Sbjct: 56520 LFLSPGYPYEEILRTFHNQTDNVMCSYLPMYNSFNFTKGR 56401
Score = 27.6 bits (54), Expect(3) = 9e-045
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / -2
Query: 244 TAVDKNTMFSAVPHNVP 194
+ +DKNT+FSAVP P
Sbjct: 55747 SGIDKNTIFSAVPPMFP 55697
Score = 24.9 bits (48), Expect(4) = 4e-035
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 195 GTLCGTAENMVFLS 236
G + GTAE MVFLS
Sbjct: 55698 GNIGGTAEKMVFLS 55739
Score = 23.1 bits (44), Expect(4) = 4e-035
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3 / +2
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLR 854
VKL G+Y H+ V L S S G PGLR
Sbjct: 56411 VKLNELYIGRYEHITLSVWL*NVLSISS*GYPGLR 56515
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
sequence
Length = 159661
Score = 158 bits (340), Expect(2) = 1e-044
Identities = 60/103 (58%), Positives = 75/103 (72%)
Frame = -3 / +2
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L
Sbjct: 120479 QLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNIL 120658
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 120659 IGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 120787
Score = 107 bits (228), Expect = 2e-021
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = -3 / +2
Query: 744 GGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQIN 565
GGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 120218 GGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQVR 120397
Query: 564 YILGDNPKKMSYV 526
+ + SY+
Sbjct: 120398 FCCPCS*SSQSYI 120436
Score = 99.1 bits (210), Expect(4) = 4e-035
Identities = 46/74 (62%), Positives = 50/74 (67%)
Frame = +2 / -2
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 120714 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 120535
Query: 518 NPTT*LIFLGLSPR 559
PTT*LIF G PR
Sbjct: 120534 KPTT*LIFSGFLPR 120493
Score = 61.6 bits (128), Expect(4) = 4e-035
Identities = 29/57 (50%), Positives = 30/57 (52%)
Frame = +2 / -2
Query: 575 DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
DLAN RR+ VV K GPQY PG RK TTY SG LPWL IPP
Sbjct: 120387 DLANLRRTSVV*KVGPQYHPGVSAASR*SLYREARKAALTTY*SG*GLPWLSCIIPP 120217
Score = 57.0 bits (118), Expect(2) = 1e-044
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = -2 / +3
Query: 859 MFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTXGR 740
+FL+PGYPY L +HN T MC Y P + +FNFT GR
Sbjct: 120027 LFLSPGYPYEEILRTFHNQTDNVMCSYLPMYNSFNFTKGR 120146
Score = 24.9 bits (48), Expect(4) = 4e-035
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / -2
Query: 195 GTLCGTAENMVFLS 236
G + GTAE MVFLS
Sbjct: 120849 GNIGGTAEKMVFLS 120808
Score = 23.1 bits (44), Expect(4) = 4e-035
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3 / -1
Query: 750 VKLKAAKPGKYMHMLRLVALW*PASXXSYG*PGLR 854
VKL G+Y H+ V L S S G PGLR
Sbjct: 120136 VKLNELYIGRYEHITLSVWL*NVLSISS*GYPGLR 120032
>gb|CB000870.1|CB000870 S345K_E05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 516
Score = 177 bits (381), Expect(2) = 1e-044
Identities = 69/116 (59%), Positives = 85/116 (73%)
Frame = -3 / +3
Query: 612 FMTTNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGY 433
F TT LR+FARSQ++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+
Sbjct: 6 FYTTEVLRKFARSQLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGF 185
Query: 432 KWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
KWR++KK +PN+L GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 186 KWRETKKPNPNILIGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 353
Score = 111 bits (238), Expect(2) = 3e-024
Identities = 56/92 (60%), Positives = 61/92 (66%)
Frame = +2 / -3
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 280 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 101
Query: 518 NPTT*LIFLGLSPRM*LI*DLANSRRSLVVMK 613
PTT*LIF G PR * DLAN RR+ VV K
Sbjct: 100 KPTT*LIFSGFLPRT*SSCDLANLRRTSVV*K 5
Score = 27.6 bits (54), Expect(2) = 1e-044
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +3
Query: 244 TAVDKNTMFSAVPHNVP 194
+ +DKNT+FSAVP P
Sbjct: 366 SGIDKNTIFSAVPPMFP 416
Score = 24.9 bits (48), Expect(2) = 3e-024
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / -3
Query: 195 GTLCGTAENMVFLS 236
G + GTAE MVFLS
Sbjct: 415 GNIGGTAEKMVFLS 374
>gb|CB648856.1|CB648856 OSJNEb12H11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12H11 3', mRNA sequence
Length = 791
Score = 175 bits (376), Expect(2) = 6e-044
Identities = 68/114 (59%), Positives = 84/114 (73%)
Frame = -3 / -1
Query: 606 TTNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKW 427
TT LR+FARSQ++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KW
Sbjct: 791 TTEVLRKFARSQLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKW 612
Query: 426 RDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
R++KK +PN+L GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 611 RETKKPNPNILIGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 450
Score = 109 bits (233), Expect(2) = 1e-023
Identities = 54/89 (60%), Positives = 59/89 (66%)
Frame = +2 / +1
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 523 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 702
Query: 518 NPTT*LIFLGLSPRM*LI*DLANSRRSLV 604
PTT*LIF G PR * DLAN RR+ V
Sbjct: 703 KPTT*LIFSGFLPRT*SSCDLANLRRTSV 789
Score = 27.6 bits (54), Expect(2) = 6e-044
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 244 TAVDKNTMFSAVPHNVP 194
+ +DKNT+FSAVP P
Sbjct: 437 SGIDKNTIFSAVPPMFP 387
Score = 24.9 bits (48), Expect(2) = 1e-023
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 195 GTLCGTAENMVFLS 236
G + GTAE MVFLS
Sbjct: 388 GNIGGTAEKMVFLS 429
>ref|NT_079916.2| Oryza sativa (japonica cultivar-group)
Length = 3914802
Score = 158 bits (340), Expect(2) = 3e-043
Identities = 60/103 (58%), Positives = 75/103 (72%)
Frame = -3 / -3
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L
Sbjct: 3196630 QLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNIL 3196451
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 3196450 IGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 3196322
Score = 107 bits (228), Expect = 2e-021
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = -3 / -3
Query: 744 GGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQIN 565
GGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 3196891 GGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQVR 3196712
Query: 564 YILGDNPKKMSYV 526
+ + SY+
Sbjct: 3196711 FCCPCS*SSQSYI 3196673
Score = 99.1 bits (210), Expect(3) = 2e-033
Identities = 46/74 (62%), Positives = 50/74 (67%)
Frame = +2 / +3
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 3196395 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 3196574
Query: 518 NPTT*LIFLGLSPR 559
PTT*LIF G PR
Sbjct: 3196575 KPTT*LIFSGFLPR 3196616
Score = 61.6 bits (128), Expect(3) = 2e-033
Identities = 29/57 (50%), Positives = 30/57 (52%)
Frame = +2 / +3
Query: 575 DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
DLAN RR+ VV K GPQY PG RK TTY SG LPWL IPP
Sbjct: 3196722 DLANLRRTSVV*KVGPQYHPGVSAASR*SLYREARKAALTTY*SG*GLPWLSCIIPP 3196892
Score = 57.0 bits (118), Expect(2) = 3e-043
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = -2 / -1
Query: 859 MFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTXGR 740
+FL+PGYPY L +HN T MC Y P + +FNFT GR
Sbjct: 3197082 LFLSPGYPYEEILRTFHNQTDNVMCSYLPMYNSFNFTKGR 3196963
Score = 24.9 bits (48), Expect(3) = 2e-033
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 195 GTLCGTAENMVFLS 236
G + GTAE MVFLS
Sbjct: 3196260 GNIGGTAEKMVFLS 3196301
>gb|CB644828.1|CB644828 OSJNEb06D08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06D08 3', mRNA sequence
Length = 811
Score = 172 bits (371), Expect(2) = 3e-043
Identities = 67/113 (59%), Positives = 83/113 (73%)
Frame = -3 / -1
Query: 603 TNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWR 424
T LR+FARSQ++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR
Sbjct: 811 TEVLRKFARSQLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWR 632
Query: 423 DSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
++KK +PN+L GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 631 ETKKPNPNILIGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 473
Score = 108 bits (231), Expect(2) = 2e-023
Identities = 53/87 (60%), Positives = 58/87 (66%)
Frame = +2 / +3
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 546 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 725
Query: 518 NPTT*LIFLGLSPRM*LI*DLANSRRS 598
PTT*LIF G PR * DLAN RR+
Sbjct: 726 KPTT*LIFSGFLPRT*SSCDLANLRRT 806
Score = 27.6 bits (54), Expect(2) = 3e-043
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 244 TAVDKNTMFSAVPHNVP 194
+ +DKNT+FSAVP P
Sbjct: 460 SGIDKNTIFSAVPPMFP 410
Score = 24.9 bits (48), Expect(2) = 2e-023
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 195 GTLCGTAENMVFLS 236
G + GTAE MVFLS
Sbjct: 411 GNIGGTAEKMVFLS 452
>gb|CB670711.1|CB670711 OSJNEe03O24.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe03O24 3', mRNA sequence
Length = 779
Score = 175 bits (376), Expect(2) = 4e-043
Identities = 68/114 (59%), Positives = 84/114 (73%)
Frame = -3 / -2
Query: 606 TTNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKW 427
TT LR+FARSQ++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KW
Sbjct: 778 TTEVLRKFARSQLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKW 599
Query: 426 RDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
R++KK +PN+L GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 598 RETKKPNPNILIGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 437
Score = 111 bits (237), Expect(2) = 1e-023
Identities = 55/90 (61%), Positives = 60/90 (66%)
Frame = +2 / +3
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 510 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 689
Query: 518 NPTT*LIFLGLSPRM*LI*DLANSRRSLVV 607
PTT*LIF G PR * DLAN RR+ VV
Sbjct: 690 KPTT*LIFSGFLPRT*SSCDLANLRRTSVV 779
Score = 24.9 bits (48), Expect(2) = 4e-043
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -2
Query: 244 TAVDKNTMFSAVPHNVP 194
+ +DKNT+F AVP P
Sbjct: 424 SGIDKNTIFFAVPPMFP 374
Score = 23.1 bits (44), Expect(2) = 1e-023
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 195 GTLCGTAENMVFLS 236
G + GTA+ MVFLS
Sbjct: 375 GNIGGTAKKMVFLS 416
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 158 bits (340), Expect(2) = 6e-043
Identities = 60/103 (58%), Positives = 75/103 (72%)
Frame = -3 / -3
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L
Sbjct: 3584131 QLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNIL 3583952
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 3583951 IGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 3583823
Score = 107 bits (228), Expect = 2e-021
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = -3 / -3
Query: 744 GGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQIN 565
GGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 3584392 GGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQVR 3584213
Query: 564 YILGDNPKKMSYV 526
+ + SY+
Sbjct: 3584212 FCCPCS*SSQSYI 3584174
Score = 99.1 bits (210), Expect(2) = 2e-031
Identities = 46/74 (62%), Positives = 50/74 (67%)
Frame = +2 / +3
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 3583896 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 3584075
Query: 518 NPTT*LIFLGLSPR 559
PTT*LIF G PR
Sbjct: 3584076 KPTT*LIFSGFLPR 3584117
Score = 61.6 bits (128), Expect(2) = 2e-031
Identities = 29/57 (50%), Positives = 30/57 (52%)
Frame = +2 / +3
Query: 575 DLANSRRSLVVMKFGPQYQPGTLTXXXXXXXXXXRKELATTYCSGCPLPWLKSAIPP 745
DLAN RR+ VV K GPQY PG RK TTY SG LPWL IPP
Sbjct: 3584223 DLANLRRTSVV*KVGPQYHPGVSAASR*SLYREARKAALTTY*SG*GLPWLSCIIPP 3584393
Score = 57.0 bits (118), Expect(2) = 6e-043
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = -2 / -1
Query: 859 MFLNPGYPYXXSLAGYHNATSLNMCMYFPGFAAFNFTXGR 740
+FL+PGYPY L +HN T MC Y P + +FNFT GR
Sbjct: 3584583 LFLSPGYPYEEILRTFHNQTDNVMCSYLPMYNSFNFTKGR 3584464
>gb|CB670083.1|CB670083 OSJNEe02P22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02P22 3', mRNA sequence
Length = 787
Score = 167 bits (360), Expect(2) = 9e-042
Identities = 64/108 (59%), Positives = 80/108 (74%)
Frame = -3 / -3
Query: 588 EFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKA 409
+FARSQ++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK
Sbjct: 785 KFARSQLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKP 606
Query: 408 DPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
+PN+L GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 605 NPNILIGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 462
Score = 103 bits (219), Expect(2) = 1e-021
Identities = 50/83 (60%), Positives = 55/83 (66%)
Frame = +2 / +1
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 535 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 714
Query: 518 NPTT*LIFLGLSPRM*LI*DLAN 586
PTT*LIF G P+ * DLAN
Sbjct: 715 KPTT*LIFSGFLPKT*SSCDLAN 783
Score = 27.6 bits (54), Expect(2) = 9e-042
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / -3
Query: 244 TAVDKNTMFSAVPHNVP 194
+ +DKNT+FSAVP P
Sbjct: 449 SGIDKNTIFSAVPPMFP 399
Score = 24.9 bits (48), Expect(2) = 1e-021
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 195 GTLCGTAENMVFLS 236
G + GTAE MVFLS
Sbjct: 400 GNIGGTAEKMVFLS 441
>gb|C25232.1|C25232 C25232 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S5659_1A, mRNA sequence
Length = 375
Score = 172 bits (370), Expect = 6e-041
Identities = 65/103 (63%), Positives = 80/103 (77%)
Frame = -3 / +1
Query: 603 TNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWR 424
T LR+FARSQ++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR
Sbjct: 1 TEVLRKFARSQLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWR 180
Query: 423 DSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAG 295
++KK +PN+L GA+V GPD++DGFKD R T + NAG
Sbjct: 181 ETKKPNPNILIGALVAGPDRHDGFKDVRTNYNYTEPTLAANAG 309
Score = 108 bits (231), Expect = 1e-021
Identities = 53/87 (60%), Positives = 58/87 (66%)
Frame = +2 / -2
Query: 338 LRESLKPSFLSGPPTMAPPSRLGSAFLLSRHL*PPVHEYLTPLCGVDAPRWCTCRGYLLP 517
+R SLKPS LSGP T AP LG FL+S HL PP+H YLTPL G+DAP GYL P
Sbjct: 266 VRTSLKPSCLSGPATSAPIRILGFGFLVSLHLKPPLHPYLTPL*GIDAPL**ARLGYLFP 87
Query: 518 NPTT*LIFLGLSPRM*LI*DLANSRRS 598
PTT*LIF G PR * DLAN RR+
Sbjct: 86 KPTT*LIFSGFLPRT*SSCDLANLRRT 6
>gb|CB661173.1|CB661173 OSJNEd03K23.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd03K23 3', mRNA sequence
Length = 626
Score = 152 bits (327), Expect(2) = 5e-037
Identities = 63/130 (48%), Positives = 79/130 (60%)
Frame = -3 / -2
Query: 642 NVPGWYCGPNFMTTNDLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHN 463
+ PGWYCGP+F LR FAR+ I +ILG NP KMSY VG G++YP+ VHH GA P N
Sbjct: 625 DTPGWYCGPHFYPIETLRNFART*IEFILGKNPLKMSYGVG*GNRYPKRVHHGGALIPKN 446
Query: 462 GVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXX 283
GV++ C GG+K ++KK PN++ GAMV GP DGFKD T GN+G
Sbjct: 445 GVQFGCKGGWKGGETKKPTPNIIVGAMVDGPYLPDGFKDVCKNFKYTEATLDGNSGLVAA 266
Query: 282 XXXLTSSGRG 253
L+ G G
Sbjct: 265 LVALSGEGHG 236
Score = 26.7 bits (52), Expect(2) = 5e-037
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 238 VDKNTMFSAVPHNVP 194
VDKN MFSAVP P
Sbjct: 235 VDKNPMFSAVPPMFP 191
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 158 bits (340), Expect = 9e-037
Identities = 61/107 (57%), Positives = 75/107 (70%)
Frame = -3 / -1
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QI YILG NP KMSYVVG+G++YP+ VHHRGAS P NGV Y C GG+KWR++KK +PN++
Sbjct: 12366208 QIEYILGKNPLKMSYVVGYGNRYPKRVHHRGASIPKNGVHYGCKGGWKWRETKKPNPNII 12366029
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMV GPD++DGFKD R T +GNAG L+ G G
Sbjct: 12366028 VGAMVAGPDRHDGFKDVRKNYNYTEATLAGNAGLVAALVALSGEGHG 12365888
Score = 158 bits (340), Expect = 9e-037
Identities = 60/103 (58%), Positives = 75/103 (72%)
Frame = -3 / -1
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L
Sbjct: 30850294 QLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNIL 30850115
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 30850114 IGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 30849986
Score = 107 bits (228), Expect = 2e-021
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = -3 / -1
Query: 744 GGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQIN 565
GGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 30850555 GGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQVR 30850376
Query: 564 YILGDNPKKMSYV 526
+ + SY+
Sbjct: 30850375 FCCPCS*SSQSYI 30850337
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 158 bits (340), Expect = 9e-037
Identities = 61/107 (57%), Positives = 75/107 (70%)
Frame = -3 / -3
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QI YILG NP KMSYVVG+G++YP+ VHHRGAS P NGV Y C GG+KWR++KK +PN++
Sbjct: 12074618 QIEYILGKNPLKMSYVVGYGNRYPKRVHHRGASIPKNGVHYGCKGGWKWRETKKPNPNII 12074439
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMV GPD++DGFKD R T +GNAG L+ G G
Sbjct: 12074438 VGAMVAGPDRHDGFKDVRKNYNYTEATLAGNAGLVAALVALSGEGHG 12074298
Score = 158 bits (340), Expect = 9e-037
Identities = 60/103 (58%), Positives = 75/103 (72%)
Frame = -3 / -3
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L
Sbjct: 29981549 QLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNIL 29981370
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 29981369 IGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 29981241
Score = 107 bits (228), Expect = 2e-021
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = -3 / -3
Query: 744 GGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQIN 565
GGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 29981810 GGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQVR 29981631
Query: 564 YILGDNPKKMSYV 526
+ + SY+
Sbjct: 29981630 FCCPCS*SSQSYI 29981592
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 158 bits (340), Expect = 9e-037
Identities = 61/107 (57%), Positives = 75/107 (70%)
Frame = -3 / -1
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
QI YILG NP KMSYVVG+G++YP+ VHHRGAS P NGV Y C GG+KWR++KK +PN++
Sbjct: 12077855 QIEYILGKNPLKMSYVVGYGNRYPKRVHHRGASIPKNGVHYGCKGGWKWRETKKPNPNII 12077676
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTSSGRG 253
GAMV GPD++DGFKD R T +GNAG L+ G G
Sbjct: 12077675 VGAMVAGPDRHDGFKDVRKNYNYTEATLAGNAGLVAALVALSGEGHG 12077535
Score = 158 bits (340), Expect = 9e-037
Identities = 60/103 (58%), Positives = 75/103 (72%)
Frame = -3 / -1
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLL 394
Q++Y+LG NP KMSYVVGFG+KYP+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L
Sbjct: 29890127 QLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNIL 29889948
Query: 393 GGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNAGXXXXXXXLTS 265
GA+V GPD++DGFKD R T + NAG LT+
Sbjct: 29889947 IGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTN 29889819
Score = 107 bits (228), Expect = 2e-021
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = -3 / -1
Query: 744 GGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQIN 565
GGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 29890388 GGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQVR 29890209
Query: 564 YILGDNPKKMSYV 526
+ + SY+
Sbjct: 29890208 FCCPCS*SSQSYI 29890170
>dbj|AK121369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125K15, full
insert sequence
Length = 2067
Score = 105 bits (224), Expect(2) = 3e-030
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = -3 / +2
Query: 705 LQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNPKKMSYV 526
LQ+ VA++FLAA+Y+DYM++ C + DLR+FA+SQ +Y+LG NP K+SY+
Sbjct: 1400 LQHPVASAFLAAVYSDYMQSSGKTELSCSGQGFSPADLRKFAKSQADYLLGSNPMKISYL 1579
Query: 525 VGFGSKYPRHVHHRGASTPHN 463
VG+G +YP VHHRGAS P +
Sbjct: 1580 VGYGDRYPEKVHHRGASIPED 1642
Score = 51.5 bits (106), Expect(2) = 3e-030
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -3 / +2
Query: 438 GYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRN 337
G+KW ++ K +PN+ GA+VGGP KND F D R+
Sbjct: 1661 GHKWLETSKPNPNVATGALVGGPYKNDSFVDERD 1762
>dbj|AK100449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090P12, full
insert sequence
Length = 2131
Score = 109 bits (233), Expect(2) = 3e-029
Identities = 46/100 (46%), Positives = 60/100 (60%)
Frame = -3 / +1
Query: 768 SPPSTSPKGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLR 589
SP +T+ + G L LQ+ +FLA +Y+DYM C + + D+R
Sbjct: 1159 SPSATASRTGGGLVWISGWNSLQHATNAAFLAVVYSDYMLTSQTAAVQCSGKYYSPTDIR 1338
Query: 588 EFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
FA SQ NYILGDNP K+SY+VG+GS YP+ VHHRGAS P
Sbjct: 1339 NFAISQANYILGDNPMKLSYLVGYGSSYPQQVHHRGASIP 1458
Score = 43.7 bits (89), Expect(2) = 3e-029
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -3 / +1
Query: 438 GYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRT 322
G+++ S +PN+ GA+VGGP +ND F DSR+ + +T
Sbjct: 1483 GFQYLHSTSPNPNVAMGALVGGPFQNDTFVDSRDNAVQT 1599
>dbj|AK067774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J08, full
insert sequence
Length = 2089
Score = 105 bits (223), Expect(2) = 7e-028
Identities = 41/79 (51%), Positives = 52/79 (65%)
Frame = -3 / +1
Query: 705 LQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNPKKMSYV 526
LQ+ +FLA +Y+DYM C + + D+R FA SQ NYILGDNP K+SY+
Sbjct: 1180 LQHATNAAFLAVVYSDYMLTSQTAAVQCSGKYYSPTDIRNFAISQANYILGDNPMKLSYL 1359
Query: 525 VGFGSKYPRHVHHRGASTP 469
VG+GS YP+ VHHRGAS P
Sbjct: 1360 VGYGSSYPQQVHHRGASIP 1416
Score = 43.7 bits (89), Expect(2) = 7e-028
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -3 / +1
Query: 438 GYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRT 322
G+++ S +PN+ GA+VGGP +ND F DSR+ + +T
Sbjct: 1441 GFQYLHSTSPNPNVAMGALVGGPFQNDTFVDSRDNAVQT 1557
>ref|NT_107201.1| Oryza sativa (japonica cultivar-group)
Length = 2893592
Score = 80.3 bits (169), Expect(3) = 1e-026
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -3 / -1
Query: 597 DLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
++ FARSQ++Y+LG NPK MSY+VG+GS YP HVHHRGAS P
Sbjct: 1881917 EILRFARSQVDYVLGKNPKGMSYMVGYGSYYPTHVHHRGASIP 1881789
Score = 53.8 bits (111), Expect(3) = 1e-026
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = -3 / -1
Query: 432 KWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNA 298
K+ +SK ADPN+L GA+VGGPD ND + D R +GNA
Sbjct: 1881740 KYYNSKNADPNVLHGALVGGPDANDAYDDDRCNYQHAEPTLAGNA 1881606
Score = 28.1 bits (55), Expect(3) = 1e-026
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3 / -1
Query: 705 LQYVVANSFLAALYADYM 652
+QYV +++FL +YADY+
Sbjct: 1882022 MQYVSSSAFLLTVYADYL 1881969
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05,
complete sequence
Length = 164943
Score = 80.3 bits (169), Expect(3) = 1e-026
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -3 / -2
Query: 597 DLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
++ FARSQ++Y+LG NPK MSY+VG+GS YP HVHHRGAS P
Sbjct: 104276 EILRFARSQVDYVLGKNPKGMSYMVGYGSYYPTHVHHRGASIP 104148
Score = 53.8 bits (111), Expect(3) = 1e-026
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = -3 / -2
Query: 432 KWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNA 298
K+ +SK ADPN+L GA+VGGPD ND + D R +GNA
Sbjct: 104099 KYYNSKNADPNVLHGALVGGPDANDAYDDDRCNYQHAEPTLAGNA 103965
Score = 28.1 bits (55), Expect(3) = 1e-026
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3 / -2
Query: 705 LQYVVANSFLAALYADYM 652
+QYV +++FL +YADY+
Sbjct: 104381 MQYVSSSAFLLTVYADYL 104328
>gb|CA999018.1|CA999018 S234M_B05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 264
Score = 109 bits (233), Expect(2) = 1e-026
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = -3 / +2
Query: 747 KGGMALFNHGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
KGGM NHGR QPLQYVV +FLA+LY+DY++A + PGWYCGP F TT LR+FARSQ+
Sbjct: 77 KGGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQL 256
Query: 567 NY 562
+Y
Sbjct: 257 DY 262
Score = 35.0 bits (70), Expect(2) = 1e-026
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2 / +2
Query: 823 LAGYHNATSLNMCMYFPGFAAFNFTXG 743
L +HN T MC Y P + +FNFT G
Sbjct: 2 LRTFHNQTDNVMCSYLPMYNSFNFTKG 82
>dbj|AK119913.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-F01, full
insert sequence
Length = 2216
Score = 80.3 bits (169), Expect(3) = 1e-026
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -3 / +1
Query: 597 DLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
++ FARSQ++Y+LG NPK MSY+VG+GS YP HVHHRGAS P
Sbjct: 1204 EILRFARSQVDYVLGKNPKGMSYMVGYGSYYPTHVHHRGASIP 1332
Score = 53.8 bits (111), Expect(3) = 1e-026
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = -3 / +1
Query: 432 KWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNA 298
K+ +SK ADPN+L GA+VGGPD ND + D R +GNA
Sbjct: 1381 KYYNSKNADPNVLHGALVGGPDANDAYDDDRCNYQHAEPTLAGNA 1515
Score = 28.1 bits (55), Expect(3) = 1e-026
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 705 LQYVVANSFLAALYADYM 652
+QYV +++FL +YADY+
Sbjct: 1099 MQYVSSSAFLLTVYADYL 1152
>ref|XM_474329.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1878
Score = 80.3 bits (169), Expect(3) = 1e-026
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -3 / +1
Query: 597 DLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
++ FARSQ++Y+LG NPK MSY+VG+GS YP HVHHRGAS P
Sbjct: 1174 EILRFARSQVDYVLGKNPKGMSYMVGYGSYYPTHVHHRGASIP 1302
Score = 53.8 bits (111), Expect(3) = 1e-026
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = -3 / +1
Query: 432 KWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNA 298
K+ +SK ADPN+L GA+VGGPD ND + D R +GNA
Sbjct: 1351 KYYNSKNADPNVLHGALVGGPDANDAYDDDRCNYQHAEPTLAGNA 1485
Score = 28.1 bits (55), Expect(3) = 1e-026
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 705 LQYVVANSFLAALYADYM 652
+QYV +++FL +YADY+
Sbjct: 1069 MQYVSSSAFLLTVYADYL 1122
>dbj|AK063458.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G09, full
insert sequence
Length = 2206
Score = 96.8 bits (205), Expect(2) = 2e-026
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = -3 / +3
Query: 723 HGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNP 544
H R LQ+V + SFL +YAD+ +C D+ +F +SQ+NYILGDNP
Sbjct: 1116 HQRWNNLQFVTSASFLLTVYADFAAISGRGAVHCPAGAAQPFDILKFVKSQVNYILGDNP 1295
Query: 543 KKMSYVVGFGSKYPRHVHHRGAS 475
+ SY+VG+G+ YPR VHHRGAS
Sbjct: 1296 RGTSYMVGYGASYPRQVHHRGAS 1364
Score = 46.9 bits (96), Expect(2) = 2e-026
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = -3 / +3
Query: 441 GGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNA 298
G W + +PNLL GA+VGGPD+ D F D R+ +T NA
Sbjct: 1410 GYSSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNA 1553
>dbj|AK099370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N02, full
insert sequence
Length = 2188
Score = 96.8 bits (205), Expect(2) = 2e-026
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = -3 / +1
Query: 723 HGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNP 544
H R LQ+V + SFL +YAD+ +C D+ +F +SQ+NYILGDNP
Sbjct: 1117 HQRWNNLQFVTSASFLLTVYADFAAISGRGAVHCPAGAAQPFDILKFVKSQVNYILGDNP 1296
Query: 543 KKMSYVVGFGSKYPRHVHHRGAS 475
+ SY+VG+G+ YPR VHHRGAS
Sbjct: 1297 RGTSYMVGYGASYPRQVHHRGAS 1365
Score = 46.9 bits (96), Expect(2) = 2e-026
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = -3 / +1
Query: 441 GGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNA 298
G W + +PNLL GA+VGGPD+ D F D R+ +T NA
Sbjct: 1411 GYSSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNA 1554
>ref|XM_476150.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1890
Score = 96.8 bits (205), Expect(2) = 2e-026
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = -3 / +1
Query: 723 HGRGQPLQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQINYILGDNP 544
H R LQ+V + SFL +YAD+ +C D+ +F +SQ+NYILGDNP
Sbjct: 1030 HQRWNNLQFVTSASFLLTVYADFAAISGRGAVHCPAGAAQPFDILKFVKSQVNYILGDNP 1209
Query: 543 KKMSYVVGFGSKYPRHVHHRGAS 475
+ SY+VG+G+ YPR VHHRGAS
Sbjct: 1210 RGTSYMVGYGASYPRQVHHRGAS 1278
Score = 46.9 bits (96), Expect(2) = 2e-026
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = -3 / +1
Query: 441 GGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGRTSRRWSGNA 298
G W + +PNLL GA+VGGPD+ D F D R+ +T NA
Sbjct: 1324 GYSSWYGREAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNA 1467
>gb|AACV01010653.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010653, whole
genome shotgun sequence
Length = 80049
Score = 80.3 bits (169), Expect(3) = 6e-026
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -3 / -1
Query: 597 DLREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
++ FARSQ++Y+LG NPK MSY+VG+GS YP HVHHRGAS P
Sbjct: 27054 EILRFARSQVDYVLGKNPKGMSYMVGYGSYYPTHVHHRGASIP 26926
Score = 51.5 bits (106), Expect(3) = 6e-026
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = -3 / -1
Query: 432 KWRDSKKADPNLLGGAMVGGPDKNDGFKDSR 340
K+ +SK ADPN+L GA+VGGPD ND + D R
Sbjct: 26877 KYYNSKNADPNVLHGALVGGPDANDAYDDDR 26785
Score = 28.1 bits (55), Expect(3) = 6e-026
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3 / -1
Query: 705 LQYVVANSFLAALYADYM 652
+QYV +++FL +YADY+
Sbjct: 27159 MQYVSSSAFLLTVYADYL 27106
>gb|AU095892.1|AU095892 AU095892 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11425, mRNA sequence
Length = 711
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 43/80 (53%), Positives = 54/80 (67%)
Frame = -3 / +1
Query: 504 PRHVHHRGASTPHNGVKYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRNTSGR 325
P+ HHRGAS PHNGVKY C GG+KWR++KK +PN+L GA+V GPD++DGFKD R
Sbjct: 28 PKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNILIGALVAGPDRHDGFKDVRTNYNY 207
Query: 324 TSRRWSGNAGXXXXXXXLTS 265
T + NAG LT+
Sbjct: 208 TEPTLAANAGLVAALISLTN 267
Score = 27.6 bits (54), Expect(2) = 1e-025
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / +1
Query: 244 TAVDKNTMFSAVPHNVP 194
+ +DKNT+FSAVP P
Sbjct: 280 SGIDKNTIFSAVPPMFP 330
>gb|AACV01014925.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014925, whole
genome shotgun sequence
Length = 3960
Score = 64.3 bits (134), Expect(3) = 3e-024
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = -3 / -1
Query: 573 QINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTPHN 463
Q +Y+LG NP K+SY+VG+G +YP VHHRGAS P +
Sbjct: 2487 QADYLLGSNPMKISYLVGYGDRYPEKVHHRGASIPED 2377
Score = 51.5 bits (106), Expect(3) = 3e-024
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -3 / -1
Query: 438 GYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSRN 337
G+KW ++ K +PN+ GA+VGGP KND F D R+
Sbjct: 2358 GHKWLETSKPNPNVATGALVGGPYKNDSFVDERD 2257
Score = 47.8 bits (98), Expect(3) = 3e-024
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = -3 / -2
Query: 705 LQYVVANSFLAALYADYMEAVNVPGWYCGPNFMTTNDLREFARSQI 568
LQ+ VA++FLAA+Y+DYM++ C + DLR+FA+SQ+
Sbjct: 2765 LQHPVASAFLAAVYSDYMQSSGKTELSCSGQGFSPADLRKFAKSQV 2628
>gb|C97417.1|C97417 C97417 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C60143_8Z, mRNA sequence
Length = 712
Score = 49.6 bits (102), Expect(5) = 5e-024
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -3 / +3
Query: 486 RGASTPHNGVKYSCTGGYKWRDSKK 412
RGAS P NGV Y C GG+KWR++KK
Sbjct: 168 RGASIPKNGVHYGCKGGWKWRETKK 242
Score = 40.9 bits (83), Expect(5) = 5e-024
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -3 / +2
Query: 543 KKMSYVVGFGSKYPRHVHHRGASTP 469
++ SYVVG+G++YP+ VHH G P
Sbjct: 110 ERCSYVVGYGNRYPKRVHHPGCLDP 184
Score = 37.7 bits (76), Expect(5) = 5e-024
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = -3 / +2
Query: 420 SKKADPNLLGGAMVGGPDKNDGFK 349
+++ PN++ GAMV GPD++DGF+
Sbjct: 233 NQETKPNIIVGAMVAGPDRHDGFQ 304
Score = 30.4 bits (60), Expect(5) = 5e-024
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3 / +2
Query: 627 YCGPNFMTTNDLREFARSQINYILGDNP 544
YCGP+F L +F R+Q L NP
Sbjct: 23 YCGPHFSPIEXLPQFCRTQNRIHLRKNP 106
Score = 28.6 bits (56), Expect(5) = 5e-024
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -2 / +2
Query: 238 VDKNTMFSAVP 206
VDKNTMFSAVP
Sbjct: 404 VDKNTMFSAVP 436
>gb|CH401191.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000028 genomic
scaffold, whole genome shotgun sequence
Length = 7678539
Score = 73.5 bits (154), Expect(3) = 7e-024
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = -3 / -1
Query: 594 LREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
L F RSQ++YILG NP+ MSY+VG+GS+YP VHHR AS P
Sbjct: 1640436 LTAFVRSQVDYILGSNPETMSYMVGYGSRYPAEVHHRAASLP 1640311
Score = 52.4 bits (108), Expect(3) = 7e-024
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = -3 / -1
Query: 456 KYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSR 340
K +C GG+ + + DPN++ GA+VGGPD +D + DSR
Sbjct: 1640289 KVTCKGGFDYLNKGSPDPNVIAGAIVGGPDADDRYDDSR 1640173
Score = 26.7 bits (52), Expect(3) = 7e-024
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3 / -1
Query: 705 LQYVVANSFLAALYADYMEAVNVPGWYCG 619
+QYV S + A++AD++ A CG
Sbjct: 1640550 MQYVTLASLVLAVHADHLTAARSASLQCG 1640464
>ref|NT_107216.1| Oryza sativa (japonica cultivar-group)
Length = 2910826
Score = 73.5 bits (154), Expect(3) = 7e-024
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = -3 / -1
Query: 594 LREFARSQINYILGDNPKKMSYVVGFGSKYPRHVHHRGASTP 469
L F RSQ++YILG NP+ MSY+VG+GS+YP VHHR AS P
Sbjct: 737515 LTAFVRSQVDYILGSNPETMSYMVGYGSRYPAEVHHRAASLP 737390
Score = 52.4 bits (108), Expect(3) = 7e-024
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = -3 / -1
Query: 456 KYSCTGGYKWRDSKKADPNLLGGAMVGGPDKNDGFKDSR 340
K +C GG+ + + DPN++ GA+VGGPD +D + DSR
Sbjct: 737368 KVTCKGGFDYLNKGSPDPNVIAGAIVGGPDADDRYDDSR 737252
Score = 26.7 bits (52), Expect(3) = 7e-024
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3 / -1
Query: 705 LQYVVANSFLAALYADYMEAVNVPGWYCG 619
+QYV S + A++AD++ A CG
Sbjct: 737629 MQYVTLASLVLAVHADHLTAARSASLQCG 737543
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 5,055,841,674
Number of Sequences: 438736
Number of extensions: 73494210
Number of successful extensions: 532834
Number of sequences better than 1.0e-020: 98
length of database: 933,473,305
effective HSP length: 60
effective length of database: 907,149,145
effective search space used: 261258953760
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)