TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4580194.2.1
(542 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC099403.1| Oryza sativa (japonica cultivar-group) chrom... 259 1e-067
gb|AC108757.1| Oryza sativa (japonica cultivar-group) chrom... 259 1e-067
dbj|AK069564.1| Oryza sativa (japonica cultivar-group) cDNA... 259 1e-067
dbj|AK103755.1| Oryza sativa (japonica cultivar-group) cDNA... 259 1e-067
gb|AACV01020330.1| Oryza sativa (japonica cultivar-group) c... 259 1e-067
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 259 1e-067
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 259 1e-067
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 259 1e-067
dbj|AP003865.2| Oryza sativa (japonica cultivar-group) geno... 86 2e-033
dbj|AP003887.3| Oryza sativa (japonica cultivar-group) geno... 86 2e-033
gb|AACV01018872.1| Oryza sativa (japonica cultivar-group) c... 86 2e-033
dbj|AK106190.1| Oryza sativa (japonica cultivar-group) cDNA... 86 2e-033
ref|XM_507298.2| PREDICTED Oryza sativa (japonica cultivar-... 86 2e-033
dbj|AK102814.1| Oryza sativa (japonica cultivar-group) cDNA... 86 2e-033
ref|XM_507594.1| PREDICTED Oryza sativa (japonica cultivar-... 86 2e-033
dbj|AK060080.1| Oryza sativa (japonica cultivar-group) cDNA... 86 2e-033
dbj|AK104718.1| Oryza sativa (japonica cultivar-group) cDNA... 86 2e-033
ref|XM_483389.1| Oryza sativa (japonica cultivar-group), mRNA 86 2e-033
ref|XM_507595.1| PREDICTED Oryza sativa (japonica cultivar-... 86 2e-033
gb|CB648102.1|CB648102 OSJNEb11F12.f OSJNEb Oryza sativa (j... 86 2e-031
gb|CB654532.1|CB654532 OSJNEc07C08.f OSJNEc Oryza sativa (j... 86 2e-031
gb|AU184509.2|AU184509 AU184509 Rice root Oryza sativa (jap... 86 1e-030
gb|CO435609.1|CO435609 OsMR675 5MT resistant rice mutant cD... 86 2e-030
>gb|AC099403.1| Oryza sativa (japonica cultivar-group) chromosome 9 clone
OSJNBa0005C18, *** SEQUENCING IN PROGRESS ***, 5 ordered
pieces
Length = 145550
Score = 259 bits (561), Expect = 1e-067
Identities = 100/127 (78%), Positives = 110/127 (86%)
Frame = +2 / -1
Query: 161 KMKRKTRNKXXXXXXXXXXXXXXXGGTIALVLTAGTWKAKIKKSQEKICNKGWECSGSKY 340
+MKRKTRNK GGT+AL+LTAGTWK K+K+S+EKIC+KGWECSGSKY
Sbjct: 34973 RMKRKTRNKIILTTLLVSAAAILIGGTVALILTAGTWKVKMKESREKICDKGWECSGSKY 34794
Query: 341 CCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQM 520
CCNDTITDFFKVYQFENLF+KRN+PVAHAVGFWDYQ+FITAAALFEP GFCTTGGKQMQM
Sbjct: 34793 CCNDTITDFFKVYQFENLFSKRNSPVAHAVGFWDYQSFITAAALFEPLGFCTTGGKQMQM 34614
Query: 521 MELCAFL 541
MELCAFL
Sbjct: 34613 MELCAFL 34593
Score = 229 bits (495), Expect = 2e-058
Identities = 102/126 (80%), Positives = 105/126 (83%)
Frame = -3 / +1
Query: 540 RKAQSSIICICLPPVVQNPWGSKRAAAVMKAW*SQNPTACATGVLRLAKRFSNWYTLKKS 361
RKAQSSIICICLPPVVQ P GSKRAAAVMK W*SQ PTA ATG+LRL KRFSNWYTLKKS
Sbjct: 34594 RKAQSSIICICLPPVVQKPRGSKRAAAVMKDW*SQKPTAWATGLLRLEKRFSNWYTLKKS 34773
Query: 360 VMVSLQQYLLPEHSHPLLQIFSCDFFILAFHVPAVSTSAIVPPTRIATAARASVHTMILF 181
VMVSLQQYLLPEHSHPL QIFS D FI FHVPAV SA VPP RIA A +SV +ILF
Sbjct: 34774 VMVSLQQYLLPEHSHPLSQIFSRDSFIFTFHVPAVRISATVPPIRIAAADTSSVVRIILF 34953
Query: 180 RVFRFI 163
RVF FI
Sbjct: 34954 RVFLFI 34971
Score = 137 bits (294), Expect = 8e-031
Identities = 67/119 (56%), Positives = 73/119 (61%)
Frame = +1 / -3
Query: 184 QDHRMDAGPGCSGDSGGRHDCAGAHGGDVEGQDKEVAGEDL*QGVGVLGEQVXXXXXXXX 363
QD+ DA GD R A GGD+EG+D+ VA EDL QGVGVLG QV
Sbjct: 34950 QDNPDDAAGVGGGDPDRRDGGADPDGGDMEGEDEGVAREDLRQGVGVLG*QVLLQRHHHR 34771
Query: 364 XXXGVPVREPLXXXXXXXXXXXXVLGLPGLHHRRGPLRAPGVLHHRRQADADDGALRLP 540
GVPVREPL +LGLP LHHRR PLRAP +LHHRRQADADDGALRLP
Sbjct: 34770 LLQGVPVREPLLQAQQPRRPRRRLLGLPVLHHRRRPLRAPRLLHHRRQADADDGALRLP 34594
>gb|AC108757.1| Oryza sativa (japonica cultivar-group) chromosome 9 clone
OSJNba0056P13, *** SEQUENCING IN PROGRESS ***, 9 ordered
pieces
Length = 173729
Score = 259 bits (561), Expect = 1e-067
Identities = 100/127 (78%), Positives = 110/127 (86%)
Frame = +2 / +2
Query: 161 KMKRKTRNKXXXXXXXXXXXXXXXGGTIALVLTAGTWKAKIKKSQEKICNKGWECSGSKY 340
+MKRKTRNK GGT+AL+LTAGTWK K+K+S+EKIC+KGWECSGSKY
Sbjct: 52793 RMKRKTRNKIILTTLLVSAAAILIGGTVALILTAGTWKVKMKESREKICDKGWECSGSKY 52972
Query: 341 CCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQM 520
CCNDTITDFFKVYQFENLF+KRN+PVAHAVGFWDYQ+FITAAALFEP GFCTTGGKQMQM
Sbjct: 52973 CCNDTITDFFKVYQFENLFSKRNSPVAHAVGFWDYQSFITAAALFEPLGFCTTGGKQMQM 53152
Query: 521 MELCAFL 541
MELCAFL
Sbjct: 53153 MELCAFL 53173
Score = 229 bits (495), Expect = 2e-058
Identities = 102/126 (80%), Positives = 105/126 (83%)
Frame = -3 / -3
Query: 540 RKAQSSIICICLPPVVQNPWGSKRAAAVMKAW*SQNPTACATGVLRLAKRFSNWYTLKKS 361
RKAQSSIICICLPPVVQ P GSKRAAAVMK W*SQ PTA ATG+LRL KRFSNWYTLKKS
Sbjct: 53172 RKAQSSIICICLPPVVQKPRGSKRAAAVMKDW*SQKPTAWATGLLRLEKRFSNWYTLKKS 52993
Query: 360 VMVSLQQYLLPEHSHPLLQIFSCDFFILAFHVPAVSTSAIVPPTRIATAARASVHTMILF 181
VMVSLQQYLLPEHSHPL QIFS D FI FHVPAV SA VPP RIA A +SV +ILF
Sbjct: 52992 VMVSLQQYLLPEHSHPLSQIFSRDSFIFTFHVPAVRISATVPPIRIAAADTSSVVRIILF 52813
Query: 180 RVFRFI 163
RVF FI
Sbjct: 52812 RVFLFI 52795
Score = 137 bits (294), Expect = 8e-031
Identities = 67/119 (56%), Positives = 73/119 (61%)
Frame = +1 / +1
Query: 184 QDHRMDAGPGCSGDSGGRHDCAGAHGGDVEGQDKEVAGEDL*QGVGVLGEQVXXXXXXXX 363
QD+ DA GD R A GGD+EG+D+ VA EDL QGVGVLG QV
Sbjct: 52816 QDNPDDAAGVGGGDPDRRDGGADPDGGDMEGEDEGVAREDLRQGVGVLG*QVLLQRHHHR 52995
Query: 364 XXXGVPVREPLXXXXXXXXXXXXVLGLPGLHHRRGPLRAPGVLHHRRQADADDGALRLP 540
GVPVREPL +LGLP LHHRR PLRAP +LHHRRQADADDGALRLP
Sbjct: 52996 LLQGVPVREPLLQAQQPRRPRRRLLGLPVLHHRRRPLRAPRLLHHRRQADADDGALRLP 53172
>dbj|AK069564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019G16, full
insert sequence
Length = 1455
Score = 259 bits (561), Expect = 1e-067
Identities = 100/127 (78%), Positives = 110/127 (86%)
Frame = +2 / +1
Query: 161 KMKRKTRNKXXXXXXXXXXXXXXXGGTIALVLTAGTWKAKIKKSQEKICNKGWECSGSKY 340
+MKRKTRNK GGT+AL+LTAGTWK K+K+S+EKIC+KGWECSGSKY
Sbjct: 106 RMKRKTRNKIILTTLLVSAAAILIGGTVALILTAGTWKVKMKESREKICDKGWECSGSKY 285
Query: 341 CCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQM 520
CCNDTITDFFKVYQFENLF+KRN+PVAHAVGFWDYQ+FITAAALFEP GFCTTGGKQMQM
Sbjct: 286 CCNDTITDFFKVYQFENLFSKRNSPVAHAVGFWDYQSFITAAALFEPLGFCTTGGKQMQM 465
Query: 521 MELCAFL 541
MELCAFL
Sbjct: 466 MELCAFL 486
Score = 229 bits (495), Expect = 2e-058
Identities = 102/126 (80%), Positives = 105/126 (83%)
Frame = -3 / -2
Query: 540 RKAQSSIICICLPPVVQNPWGSKRAAAVMKAW*SQNPTACATGVLRLAKRFSNWYTLKKS 361
RKAQSSIICICLPPVVQ P GSKRAAAVMK W*SQ PTA ATG+LRL KRFSNWYTLKKS
Sbjct: 485 RKAQSSIICICLPPVVQKPRGSKRAAAVMKDW*SQKPTAWATGLLRLEKRFSNWYTLKKS 306
Query: 360 VMVSLQQYLLPEHSHPLLQIFSCDFFILAFHVPAVSTSAIVPPTRIATAARASVHTMILF 181
VMVSLQQYLLPEHSHPL QIFS D FI FHVPAV SA VPP RIA A +SV +ILF
Sbjct: 305 VMVSLQQYLLPEHSHPLSQIFSRDSFIFTFHVPAVRISATVPPIRIAAADTSSVVRIILF 126
Query: 180 RVFRFI 163
RVF FI
Sbjct: 125 RVFLFI 108
Score = 137 bits (294), Expect = 8e-031
Identities = 67/119 (56%), Positives = 73/119 (61%)
Frame = +1 / +3
Query: 184 QDHRMDAGPGCSGDSGGRHDCAGAHGGDVEGQDKEVAGEDL*QGVGVLGEQVXXXXXXXX 363
QD+ DA GD R A GGD+EG+D+ VA EDL QGVGVLG QV
Sbjct: 129 QDNPDDAAGVGGGDPDRRDGGADPDGGDMEGEDEGVAREDLRQGVGVLG*QVLLQRHHHR 308
Query: 364 XXXGVPVREPLXXXXXXXXXXXXVLGLPGLHHRRGPLRAPGVLHHRRQADADDGALRLP 540
GVPVREPL +LGLP LHHRR PLRAP +LHHRRQADADDGALRLP
Sbjct: 309 LLQGVPVREPLLQAQQPRRPRRRLLGLPVLHHRRRPLRAPRLLHHRRQADADDGALRLP 485
>dbj|AK103755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143D05, full
insert sequence
Length = 1649
Score = 259 bits (561), Expect = 1e-067
Identities = 100/127 (78%), Positives = 110/127 (86%)
Frame = +2 / +2
Query: 161 KMKRKTRNKXXXXXXXXXXXXXXXGGTIALVLTAGTWKAKIKKSQEKICNKGWECSGSKY 340
+MKRKTRNK GGT+AL+LTAGTWK K+K+S+EKIC+KGWECSGSKY
Sbjct: 323 RMKRKTRNKIILTTLLVSAAAILIGGTVALILTAGTWKVKMKESREKICDKGWECSGSKY 502
Query: 341 CCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQM 520
CCNDTITDFFKVYQFENLF+KRN+PVAHAVGFWDYQ+FITAAALFEP GFCTTGGKQMQM
Sbjct: 503 CCNDTITDFFKVYQFENLFSKRNSPVAHAVGFWDYQSFITAAALFEPLGFCTTGGKQMQM 682
Query: 521 MELCAFL 541
MELCAFL
Sbjct: 683 MELCAFL 703
Score = 229 bits (495), Expect = 2e-058
Identities = 102/126 (80%), Positives = 105/126 (83%)
Frame = -3 / -3
Query: 540 RKAQSSIICICLPPVVQNPWGSKRAAAVMKAW*SQNPTACATGVLRLAKRFSNWYTLKKS 361
RKAQSSIICICLPPVVQ P GSKRAAAVMK W*SQ PTA ATG+LRL KRFSNWYTLKKS
Sbjct: 702 RKAQSSIICICLPPVVQKPRGSKRAAAVMKDW*SQKPTAWATGLLRLEKRFSNWYTLKKS 523
Query: 360 VMVSLQQYLLPEHSHPLLQIFSCDFFILAFHVPAVSTSAIVPPTRIATAARASVHTMILF 181
VMVSLQQYLLPEHSHPL QIFS D FI FHVPAV SA VPP RIA A +SV +ILF
Sbjct: 522 VMVSLQQYLLPEHSHPLSQIFSRDSFIFTFHVPAVRISATVPPIRIAAADTSSVVRIILF 343
Query: 180 RVFRFI 163
RVF FI
Sbjct: 342 RVFLFI 325
Score = 137 bits (294), Expect = 8e-031
Identities = 67/119 (56%), Positives = 73/119 (61%)
Frame = +1 / +1
Query: 184 QDHRMDAGPGCSGDSGGRHDCAGAHGGDVEGQDKEVAGEDL*QGVGVLGEQVXXXXXXXX 363
QD+ DA GD R A GGD+EG+D+ VA EDL QGVGVLG QV
Sbjct: 346 QDNPDDAAGVGGGDPDRRDGGADPDGGDMEGEDEGVAREDLRQGVGVLG*QVLLQRHHHR 525
Query: 364 XXXGVPVREPLXXXXXXXXXXXXVLGLPGLHHRRGPLRAPGVLHHRRQADADDGALRLP 540
GVPVREPL +LGLP LHHRR PLRAP +LHHRRQADADDGALRLP
Sbjct: 526 LLQGVPVREPLLQAQQPRRPRRRLLGLPVLHHRRRPLRAPRLLHHRRQADADDGALRLP 702
>gb|AACV01020330.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020330, whole
genome shotgun sequence
Length = 20978
Score = 259 bits (561), Expect = 1e-067
Identities = 100/127 (78%), Positives = 110/127 (86%)
Frame = +2 / +1
Query: 161 KMKRKTRNKXXXXXXXXXXXXXXXGGTIALVLTAGTWKAKIKKSQEKICNKGWECSGSKY 340
+MKRKTRNK GGT+AL+LTAGTWK K+K+S+EKIC+KGWECSGSKY
Sbjct: 15319 RMKRKTRNKIILTTLLVSAAAILIGGTVALILTAGTWKVKMKESREKICDKGWECSGSKY 15498
Query: 341 CCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQM 520
CCNDTITDFFKVYQFENLF+KRN+PVAHAVGFWDYQ+FITAAALFEP GFCTTGGKQMQM
Sbjct: 15499 CCNDTITDFFKVYQFENLFSKRNSPVAHAVGFWDYQSFITAAALFEPLGFCTTGGKQMQM 15678
Query: 521 MELCAFL 541
MELCAFL
Sbjct: 15679 MELCAFL 15699
Score = 229 bits (495), Expect = 2e-058
Identities = 102/126 (80%), Positives = 105/126 (83%)
Frame = -3 / -1
Query: 540 RKAQSSIICICLPPVVQNPWGSKRAAAVMKAW*SQNPTACATGVLRLAKRFSNWYTLKKS 361
RKAQSSIICICLPPVVQ P GSKRAAAVMK W*SQ PTA ATG+LRL KRFSNWYTLKKS
Sbjct: 15698 RKAQSSIICICLPPVVQKPRGSKRAAAVMKDW*SQKPTAWATGLLRLEKRFSNWYTLKKS 15519
Query: 360 VMVSLQQYLLPEHSHPLLQIFSCDFFILAFHVPAVSTSAIVPPTRIATAARASVHTMILF 181
VMVSLQQYLLPEHSHPL QIFS D FI FHVPAV SA VPP RIA A +SV +ILF
Sbjct: 15518 VMVSLQQYLLPEHSHPLSQIFSRDSFIFTFHVPAVRISATVPPIRIAAADTSSVVRIILF 15339
Query: 180 RVFRFI 163
RVF FI
Sbjct: 15338 RVFLFI 15321
Score = 137 bits (294), Expect = 8e-031
Identities = 67/119 (56%), Positives = 73/119 (61%)
Frame = +1 / +3
Query: 184 QDHRMDAGPGCSGDSGGRHDCAGAHGGDVEGQDKEVAGEDL*QGVGVLGEQVXXXXXXXX 363
QD+ DA GD R A GGD+EG+D+ VA EDL QGVGVLG QV
Sbjct: 15342 QDNPDDAAGVGGGDPDRRDGGADPDGGDMEGEDEGVAREDLRQGVGVLG*QVLLQRHHHR 15521
Query: 364 XXXGVPVREPLXXXXXXXXXXXXVLGLPGLHHRRGPLRAPGVLHHRRQADADDGALRLP 540
GVPVREPL +LGLP LHHRR PLRAP +LHHRRQADADDGALRLP
Sbjct: 15522 LLQGVPVREPLLQAQQPRRPRRRLLGLPVLHHRRRPLRAPRLLHHRRQADADDGALRLP 15698
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 259 bits (561), Expect = 1e-067
Identities = 100/127 (78%), Positives = 110/127 (86%)
Frame = +2 / +3
Query: 161 KMKRKTRNKXXXXXXXXXXXXXXXGGTIALVLTAGTWKAKIKKSQEKICNKGWECSGSKY 340
+MKRKTRNK GGT+AL+LTAGTWK K+K+S+EKIC+KGWECSGSKY
Sbjct: 8385441 RMKRKTRNKIILTTLLVSAAAILIGGTVALILTAGTWKVKMKESREKICDKGWECSGSKY 8385620
Query: 341 CCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQM 520
CCNDTITDFFKVYQFENLF+KRN+PVAHAVGFWDYQ+FITAAALFEP GFCTTGGKQMQM
Sbjct: 8385621 CCNDTITDFFKVYQFENLFSKRNSPVAHAVGFWDYQSFITAAALFEPLGFCTTGGKQMQM 8385800
Query: 521 MELCAFL 541
MELCAFL
Sbjct: 8385801 MELCAFL 8385821
Score = 229 bits (495), Expect = 2e-058
Identities = 102/126 (80%), Positives = 105/126 (83%)
Frame = -3 / -1
Query: 540 RKAQSSIICICLPPVVQNPWGSKRAAAVMKAW*SQNPTACATGVLRLAKRFSNWYTLKKS 361
RKAQSSIICICLPPVVQ P GSKRAAAVMK W*SQ PTA ATG+LRL KRFSNWYTLKKS
Sbjct: 8385820 RKAQSSIICICLPPVVQKPRGSKRAAAVMKDW*SQKPTAWATGLLRLEKRFSNWYTLKKS 8385641
Query: 360 VMVSLQQYLLPEHSHPLLQIFSCDFFILAFHVPAVSTSAIVPPTRIATAARASVHTMILF 181
VMVSLQQYLLPEHSHPL QIFS D FI FHVPAV SA VPP RIA A +SV +ILF
Sbjct: 8385640 VMVSLQQYLLPEHSHPLSQIFSRDSFIFTFHVPAVRISATVPPIRIAAADTSSVVRIILF 8385461
Query: 180 RVFRFI 163
RVF FI
Sbjct: 8385460 RVFLFI 8385443
Score = 137 bits (294), Expect = 8e-031
Identities = 67/119 (56%), Positives = 73/119 (61%)
Frame = +1 / +2
Query: 184 QDHRMDAGPGCSGDSGGRHDCAGAHGGDVEGQDKEVAGEDL*QGVGVLGEQVXXXXXXXX 363
QD+ DA GD R A GGD+EG+D+ VA EDL QGVGVLG QV
Sbjct: 8385464 QDNPDDAAGVGGGDPDRRDGGADPDGGDMEGEDEGVAREDLRQGVGVLG*QVLLQRHHHR 8385643
Query: 364 XXXGVPVREPLXXXXXXXXXXXXVLGLPGLHHRRGPLRAPGVLHHRRQADADDGALRLP 540
GVPVREPL +LGLP LHHRR PLRAP +LHHRRQADADDGALRLP
Sbjct: 8385644 LLQGVPVREPLLQAQQPRRPRRRLLGLPVLHHRRRPLRAPRLLHHRRQADADDGALRLP 8385820
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 259 bits (561), Expect = 1e-067
Identities = 100/127 (78%), Positives = 110/127 (86%)
Frame = +2 / +3
Query: 161 KMKRKTRNKXXXXXXXXXXXXXXXGGTIALVLTAGTWKAKIKKSQEKICNKGWECSGSKY 340
+MKRKTRNK GGT+AL+LTAGTWK K+K+S+EKIC+KGWECSGSKY
Sbjct: 17859252 RMKRKTRNKIILTTLLVSAAAILIGGTVALILTAGTWKVKMKESREKICDKGWECSGSKY 17859431
Query: 341 CCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQM 520
CCNDTITDFFKVYQFENLF+KRN+PVAHAVGFWDYQ+FITAAALFEP GFCTTGGKQMQM
Sbjct: 17859432 CCNDTITDFFKVYQFENLFSKRNSPVAHAVGFWDYQSFITAAALFEPLGFCTTGGKQMQM 17859611
Query: 521 MELCAFL 541
MELCAFL
Sbjct: 17859612 MELCAFL 17859632
Score = 229 bits (495), Expect = 2e-058
Identities = 102/126 (80%), Positives = 105/126 (83%)
Frame = -3 / -1
Query: 540 RKAQSSIICICLPPVVQNPWGSKRAAAVMKAW*SQNPTACATGVLRLAKRFSNWYTLKKS 361
RKAQSSIICICLPPVVQ P GSKRAAAVMK W*SQ PTA ATG+LRL KRFSNWYTLKKS
Sbjct: 17859631 RKAQSSIICICLPPVVQKPRGSKRAAAVMKDW*SQKPTAWATGLLRLEKRFSNWYTLKKS 17859452
Query: 360 VMVSLQQYLLPEHSHPLLQIFSCDFFILAFHVPAVSTSAIVPPTRIATAARASVHTMILF 181
VMVSLQQYLLPEHSHPL QIFS D FI FHVPAV SA VPP RIA A +SV +ILF
Sbjct: 17859451 VMVSLQQYLLPEHSHPLSQIFSRDSFIFTFHVPAVRISATVPPIRIAAADTSSVVRIILF 17859272
Query: 180 RVFRFI 163
RVF FI
Sbjct: 17859271 RVFLFI 17859254
Score = 137 bits (294), Expect = 8e-031
Identities = 67/119 (56%), Positives = 73/119 (61%)
Frame = +1 / +2
Query: 184 QDHRMDAGPGCSGDSGGRHDCAGAHGGDVEGQDKEVAGEDL*QGVGVLGEQVXXXXXXXX 363
QD+ DA GD R A GGD+EG+D+ VA EDL QGVGVLG QV
Sbjct: 17859275 QDNPDDAAGVGGGDPDRRDGGADPDGGDMEGEDEGVAREDLRQGVGVLG*QVLLQRHHHR 17859454
Query: 364 XXXGVPVREPLXXXXXXXXXXXXVLGLPGLHHRRGPLRAPGVLHHRRQADADDGALRLP 540
GVPVREPL +LGLP LHHRR PLRAP +LHHRRQADADDGALRLP
Sbjct: 17859455 LLQGVPVREPLLQAQQPRRPRRRLLGLPVLHHRRRPLRAPRLLHHRRQADADDGALRLP 17859631
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 259 bits (561), Expect = 1e-067
Identities = 100/127 (78%), Positives = 110/127 (86%)
Frame = +2 / +3
Query: 161 KMKRKTRNKXXXXXXXXXXXXXXXGGTIALVLTAGTWKAKIKKSQEKICNKGWECSGSKY 340
+MKRKTRNK GGT+AL+LTAGTWK K+K+S+EKIC+KGWECSGSKY
Sbjct: 18857079 RMKRKTRNKIILTTLLVSAAAILIGGTVALILTAGTWKVKMKESREKICDKGWECSGSKY 18857258
Query: 341 CCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQM 520
CCNDTITDFFKVYQFENLF+KRN+PVAHAVGFWDYQ+FITAAALFEP GFCTTGGKQMQM
Sbjct: 18857259 CCNDTITDFFKVYQFENLFSKRNSPVAHAVGFWDYQSFITAAALFEPLGFCTTGGKQMQM 18857438
Query: 521 MELCAFL 541
MELCAFL
Sbjct: 18857439 MELCAFL 18857459
Score = 229 bits (495), Expect = 2e-058
Identities = 102/126 (80%), Positives = 105/126 (83%)
Frame = -3 / -1
Query: 540 RKAQSSIICICLPPVVQNPWGSKRAAAVMKAW*SQNPTACATGVLRLAKRFSNWYTLKKS 361
RKAQSSIICICLPPVVQ P GSKRAAAVMK W*SQ PTA ATG+LRL KRFSNWYTLKKS
Sbjct: 18857458 RKAQSSIICICLPPVVQKPRGSKRAAAVMKDW*SQKPTAWATGLLRLEKRFSNWYTLKKS 18857279
Query: 360 VMVSLQQYLLPEHSHPLLQIFSCDFFILAFHVPAVSTSAIVPPTRIATAARASVHTMILF 181
VMVSLQQYLLPEHSHPL QIFS D FI FHVPAV SA VPP RIA A +SV +ILF
Sbjct: 18857278 VMVSLQQYLLPEHSHPLSQIFSRDSFIFTFHVPAVRISATVPPIRIAAADTSSVVRIILF 18857099
Query: 180 RVFRFI 163
RVF FI
Sbjct: 18857098 RVFLFI 18857081
Score = 137 bits (294), Expect = 8e-031
Identities = 67/119 (56%), Positives = 73/119 (61%)
Frame = +1 / +2
Query: 184 QDHRMDAGPGCSGDSGGRHDCAGAHGGDVEGQDKEVAGEDL*QGVGVLGEQVXXXXXXXX 363
QD+ DA GD R A GGD+EG+D+ VA EDL QGVGVLG QV
Sbjct: 18857102 QDNPDDAAGVGGGDPDRRDGGADPDGGDMEGEDEGVAREDLRQGVGVLG*QVLLQRHHHR 18857281
Query: 364 XXXGVPVREPLXXXXXXXXXXXXVLGLPGLHHRRGPLRAPGVLHHRRQADADDGALRLP 540
GVPVREPL +LGLP LHHRR PLRAP +LHHRRQADADDGALRLP
Sbjct: 18857282 LLQGVPVREPLLQAQQPRRPRRRLLGLPVLHHRRRPLRAPRLLHHRRQADADDGALRLP 18857458
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1081_B12
Length = 124741
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / -3
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 54884 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 54768
Score = 80.3 bits (169), Expect(2) = 2e-033
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2 / -3
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMMELCAFL 541
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E+ AFL
Sbjct: 54773 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFL 54633
>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1186_G01
Length = 112077
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / -1
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 5568 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 5452
Score = 80.3 bits (169), Expect(2) = 2e-033
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2 / -1
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMMELCAFL 541
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E+ AFL
Sbjct: 5457 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFL 5317
>gb|AACV01018872.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018872, whole
genome shotgun sequence
Length = 16017
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +3
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 3972 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 4088
Score = 80.3 bits (169), Expect(2) = 2e-033
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2 / +3
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMMELCAFL 541
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E+ AFL
Sbjct: 4083 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFL 4223
>dbj|AK106190.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E01, full
insert sequence
Length = 1272
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +1
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 193 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 309
Score = 80.3 bits (169), Expect(2) = 2e-033
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2 / +1
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMMELCAFL 541
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E+ AFL
Sbjct: 304 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFL 444
>ref|XM_507298.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1081_B12.117
mRNA
Length = 1272
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +1
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 193 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 309
Score = 80.3 bits (169), Expect(2) = 2e-033
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2 / +1
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMMELCAFL 541
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E+ AFL
Sbjct: 304 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFL 444
>dbj|AK102814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108M05, full
insert sequence
Length = 1262
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +3
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 195 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 311
Score = 80.3 bits (169), Expect(2) = 2e-033
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2 / +3
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMMELCAFL 541
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E+ AFL
Sbjct: 306 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFL 446
>ref|XM_507594.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1081_B12.117
mRNA
Length = 1262
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +3
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 195 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 311
Score = 80.3 bits (169), Expect(2) = 2e-033
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2 / +3
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMMELCAFL 541
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E+ AFL
Sbjct: 306 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFL 446
>dbj|AK060080.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D01, full
insert sequence
Length = 1260
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +1
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 193 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 309
Score = 80.3 bits (169), Expect(2) = 2e-033
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2 / +1
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMMELCAFL 541
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E+ AFL
Sbjct: 304 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFL 444
>dbj|AK104718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A09, full
insert sequence
Length = 1260
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +1
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 193 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 309
Score = 80.3 bits (169), Expect(2) = 2e-033
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2 / +1
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMMELCAFL 541
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E+ AFL
Sbjct: 304 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFL 444
>ref|XM_483389.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1260
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +1
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 193 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 309
Score = 80.3 bits (169), Expect(2) = 2e-033
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2 / +1
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMMELCAFL 541
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E+ AFL
Sbjct: 304 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFL 444
>ref|XM_507595.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1081_B12.117
mRNA
Length = 1260
Score = 85.8 bits (181), Expect(2) = 2e-033
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +1
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 193 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 309
Score = 80.3 bits (169), Expect(2) = 2e-033
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2 / +1
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMMELCAFL 541
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E+ AFL
Sbjct: 304 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFL 444
>gb|CB648102.1|CB648102 OSJNEb11F12.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11F12 5', mRNA sequence
Length = 417
Score = 85.8 bits (181), Expect(2) = 2e-031
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +2
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 179 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 295
Score = 73.5 bits (154), Expect(2) = 2e-031
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2 / +2
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMME 526
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E
Sbjct: 290 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKE 415
>gb|CB654532.1|CB654532 OSJNEc07C08.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07C08 5', mRNA sequence
Length = 419
Score = 85.8 bits (181), Expect(2) = 2e-031
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +1
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 181 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 297
Score = 73.5 bits (154), Expect(2) = 2e-031
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2 / +1
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQMQMME 526
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++ M E
Sbjct: 292 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKE 417
>gb|AU184509.2|AU184509 AU184509 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2487, mRNA sequence
Length = 415
Score = 85.8 bits (181), Expect(2) = 1e-030
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +1
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 184 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 300
Score = 70.3 bits (147), Expect(2) = 1e-030
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2 / +1
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQM 514
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++
Sbjct: 295 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEV 408
>gb|CO435609.1|CO435609 OsMR675 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 542
Score = 85.8 bits (181), Expect(2) = 2e-030
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2 / +2
Query: 293 QEKICNKGWECSGSKYCCNDTITDFFKVYQFENLFAKRN 409
+ K C+KGWECSGS++CCNDTITD+FK YQFE LFA RN
Sbjct: 233 EAKACDKGWECSGSRFCCNDTITDYFKAYQFEELFAHRN 349
Score = 70.3 bits (147), Expect(2) = 2e-030
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2 / +2
Query: 401 KRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQM 514
+ + +AHA GFWDY AFITAAALFEP+GF TTGGK++
Sbjct: 344 RNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEV 457
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,314,201,612
Number of Sequences: 438736
Number of extensions: 29752532
Number of successful extensions: 273235
Number of sequences better than 1.0e-020: 29
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 110779247274
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)