TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3995470.2.1
(744 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB683392.1|CB683392 OSJNEf11L08.f OSJNEf Oryza sativa (j... 141 7e-032
ref|NM_196405.1| Oryza sativa (japonica cultivar-group) hyp... 93 4e-028
gb|AACV01005957.1| Oryza sativa (japonica cultivar-group) c... 97 7e-025
gb|CV729296.1|CV729296 FLO--02-B04.g1 Rice flower lambda ph... 92 1e-024
gb|AC144491.1| Oryza sativa (japonica cultivar-group) chrom... 97 2e-024
gb|AC126221.2| Oryza sativa (japonica cultivar-group) chrom... 97 2e-024
dbj|AK071601.1| Oryza sativa (japonica cultivar-group) cDNA... 92 4e-024
gb|CV733228.1|CV733228 FLO--08-A18.g1 Rice flower lambda ph... 92 4e-024
gb|AACV01021504.1| Oryza sativa (japonica cultivar-group) c... 93 1e-023
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 97 3e-023
ref|XM_467790.1| Oryza sativa (japonica cultivar-group), mRNA 90 3e-023
gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbar... 93 9e-023
gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbar... 93 9e-023
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 97 1e-022
gb|AACV01013344.1| Oryza sativa (japonica cultivar-group) c... 92 6e-022
ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chr... 93 7e-022
gb|AACV01005419.1| Oryza sativa (japonica cultivar-group) c... 90 2e-021
dbj|AP003513.2| Oryza sativa (japonica cultivar-group) geno... 92 3e-021
dbj|AP003569.3| Oryza sativa (japonica cultivar-group) geno... 92 4e-021
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 93 5e-021
>gb|CB683392.1|CB683392 OSJNEf11L08.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11L08 5', mRNA sequence
Length = 632
Score = 141 bits (303), Expect = 7e-032
Identities = 62/85 (72%), Positives = 69/85 (81%)
Frame = +2 / +1
Query: 83 GGRRGRISDDEINELISKLQALLPEXXXXXXXXXXXXXKLLKETCAYVKSLHREVDDLSE 262
GG GRI+D+EINELISKLQALLPE KLLKETC+Y+KSLHREVDDLS+
Sbjct: 223 GGGGGRITDEEINELISKLQALLPESSRSRGASRSSASKLLKETCSYIKSLHREVDDLSD 402
Query: 263 RLSGLMATMDNDSPQAEIIRSLLR* 337
RLS LM+TMDN+SPQAEIIRSLLR*
Sbjct: 403 RLSELMSTMDNNSPQAEIIRSLLR* 477
Score = 110 bits (234), Expect = 2e-022
Identities = 49/83 (59%), Positives = 55/83 (66%)
Frame = -3 / -3
Query: 337 SPEEAPDDLGLGAVVVHGRHEPRQPLREVVHLPVQALDVGXXXXXXXXXXXXXXXXXX*G 158
SPEEAPDDLGL AVVVH RHE RQP+ +VVHLPVQALDV G
Sbjct: 477 SPEEAPDDLGLRAVVVHRRHELRQPVGQVVHLPVQALDVAARLLEQLRRRRPACAAAAGG 298
Query: 157 FREESLELGDQLVDLVVADPATS 89
REE L+LGD+LVDL+V DP +S
Sbjct: 297 LREEGLKLGDELVDLLVGDPPSS 229
>ref|NM_196405.1| Oryza sativa (japonica cultivar-group) hypothetical protein similar
to putative DNA binding proteins (OSJNBa0044A10.22),
mRNA
Length = 267
Score = 93.2 bits (197), Expect(3) = 4e-028
Identities = 40/47 (85%), Positives = 45/47 (95%)
Frame = +2 / +1
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR* 337
KLLKE C+Y+KSLHREVDDLSERLS LMATMD++SPQA+IIRSLLR*
Sbjct: 127 KLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 267
Score = 47.8 bits (98), Expect(3) = 4e-028
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2 / +1
Query: 74 MSSGGRRGRISDDEINELISKLQALLPE 157
MS GRI+DDEINELISKLQ+LLPE
Sbjct: 1 MSGRRASGRITDDEINELISKLQSLLPE 84
Score = 24.4 bits (47), Expect(3) = 4e-028
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 148 PPGILTPPER 177
PPG+L+PP R
Sbjct: 75 PPGVLSPPRR 104
>gb|AACV01005957.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005957, whole
genome shotgun sequence
Length = 59938
Score = 96.8 bits (205), Expect(2) = 7e-025
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = +2 / +2
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR* 337
KLLKETC+Y+KSLHREVDDLS+RLS LM+TMDN+SPQAEIIRSLLR*
Sbjct: 14846 KLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 14986
Score = 49.6 bits (102), Expect(2) = 7e-025
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +2 / +1
Query: 83 GGRRGRISDDEINELISKLQALLPE 157
GG GRI+D+EINELISKLQALLPE
Sbjct: 14443 GGGGGRITDEEINELISKLQALLPE 14517
>gb|CV729296.1|CV729296 FLO--02-B04.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--02-B04,
mRNA sequence
Length = 516
Score = 91.8 bits (194), Expect(2) = 1e-024
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +2 / +2
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR*L 340
KLLKETC+Y+KSLHREVDDLS+RLS LMA MD++SP AEIIRSLLR*L
Sbjct: 248 KLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR*L 391
Score = 45.5 bits (93), Expect(2) = 1e-024
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 53 PLPPAGDMSSGGRRGRISDDEINELISKLQALLP 154
P PP S R +S+DEINELISKLQ+LLP
Sbjct: 107 PSPPPTMSSRRSSRSSVSEDEINELISKLQSLLP 208
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11,
complete sequence
Length = 132151
Score = 96.8 bits (205), Expect(2) = 2e-024
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = +2 / +3
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR* 337
KLLKETC+Y+KSLHREVDDLS+RLS LM+TMDN+SPQAEIIRSLLR*
Sbjct: 106437 KLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 106577
Score = 49.6 bits (102), Expect(2) = 2e-024
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +2 / +2
Query: 83 GGRRGRISDDEINELISKLQALLPE 157
GG GRI+D+EINELISKLQALLPE
Sbjct: 106034 GGGGGRITDEEINELISKLQALLPE 106108
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0015N19, complete sequence
Length = 168430
Score = 96.8 bits (205), Expect(2) = 2e-024
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = +2 / +2
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR* 337
KLLKETC+Y+KSLHREVDDLS+RLS LM+TMDN+SPQAEIIRSLLR*
Sbjct: 34286 KLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 34426
Score = 49.6 bits (102), Expect(2) = 2e-024
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +2 / +1
Query: 83 GGRRGRISDDEINELISKLQALLPE 157
GG GRI+D+EINELISKLQALLPE
Sbjct: 33883 GGGGGRITDEEINELISKLQALLPE 33957
>dbj|AK071601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102C01, full
insert sequence
Length = 799
Score = 91.8 bits (194), Expect(2) = 4e-024
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +2 / +2
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR*L 340
KLLKETC+Y+KSLHREVDDLS+RLS LMA MD++SP AEIIRSLLR*L
Sbjct: 230 KLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR*L 373
Score = 43.7 bits (89), Expect(2) = 4e-024
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 53 PLPPAGDMSSGGRRGRISDDEINELISKLQALLP 154
P PP S R +S++EINELISKLQ+LLP
Sbjct: 89 PSPPPTMSSRRSSRSSVSEEEINELISKLQSLLP 190
>gb|CV733228.1|CV733228 FLO--08-A18.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--08-A18,
mRNA sequence
Length = 527
Score = 91.8 bits (194), Expect(2) = 4e-024
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +2 / +3
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR*L 340
KLLKETC+Y+KSLHREVDDLS+RLS LMA MD++SP AEIIRSLLR*L
Sbjct: 276 KLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR*L 419
Score = 43.7 bits (89), Expect(2) = 4e-024
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2 / +3
Query: 53 PLPPAGDMSSGGRRGRISDDEINELISKLQALLP 154
P PP S R +S++EINELISKLQ+LLP
Sbjct: 135 PSPPPTMSSRRSSRSSVSEEEINELISKLQSLLP 236
>gb|AACV01021504.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021504, whole
genome shotgun sequence
Length = 21962
Score = 93.2 bits (197), Expect(2) = 1e-023
Identities = 40/47 (85%), Positives = 45/47 (95%)
Frame = +2 / +1
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR* 337
KLLKE C+Y+KSLHREVDDLSERLS LMATMD++SPQA+IIRSLLR*
Sbjct: 7990 KLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 8130
Score = 47.8 bits (98), Expect(2) = 1e-023
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2 / +1
Query: 74 MSSGGRRGRISDDEINELISKLQALLPE 157
MS GRI+DDEINELISKLQ+LLPE
Sbjct: 7750 MSGRRASGRITDDEINELISKLQSLLPE 7833
>ref|NT_079917.2| Oryza sativa (japonica cultivar-group)
Length = 2507935
Score = 96.8 bits (205), Expect(2) = 3e-023
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = +2 / +1
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR* 337
KLLKETC+Y+KSLHREVDDLS+RLS LM+TMDN+SPQAEIIRSLLR*
Sbjct: 2236381 KLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 2236521
Score = 49.6 bits (102), Expect(2) = 3e-023
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +2 / +3
Query: 83 GGRRGRISDDEINELISKLQALLPE 157
GG GRI+D+EINELISKLQALLPE
Sbjct: 2235978 GGGGGRITDEEINELISKLQALLPE 2236052
>ref|XM_467790.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 267
Score = 90.4 bits (191), Expect(2) = 3e-023
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = +2 / +1
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR 334
KLLKETC Y+KSLHREVDDLS+RLS LMATMD++SP AEIIRS+LR
Sbjct: 124 KLLKETCNYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSILR 261
Score = 41.4 bits (84), Expect(2) = 3e-023
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +2 / +1
Query: 92 RGRISDDEINELISKLQALLP 154
RG IS++EINELISKLQ+LLP
Sbjct: 22 RGSISEEEINELISKLQSLLP 84
>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0044A10, from chromosome 10, complete sequence
Length = 169270
Score = 93.2 bits (197), Expect(2) = 9e-023
Identities = 40/47 (85%), Positives = 45/47 (95%)
Frame = +2 / -1
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR* 337
KLLKE C+Y+KSLHREVDDLSERLS LMATMD++SPQA+IIRSLLR*
Sbjct: 162706 KLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 162566
Score = 47.8 bits (98), Expect(2) = 9e-023
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2 / -1
Query: 74 MSSGGRRGRISDDEINELISKLQALLPE 157
MS GRI+DDEINELISKLQ+LLPE
Sbjct: 162946 MSGRRASGRITDDEINELISKLQSLLPE 162863
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNAa0044A10, from chromosome 10, complete sequence
Length = 173374
Score = 93.2 bits (197), Expect(2) = 9e-023
Identities = 40/47 (85%), Positives = 45/47 (95%)
Frame = +2 / -2
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR* 337
KLLKE C+Y+KSLHREVDDLSERLS LMATMD++SPQA+IIRSLLR*
Sbjct: 53436 KLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 53296
Score = 47.8 bits (98), Expect(2) = 9e-023
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2 / -2
Query: 74 MSSGGRRGRISDDEINELISKLQALLPE 157
MS GRI+DDEINELISKLQ+LLPE
Sbjct: 53676 MSGRRASGRITDDEINELISKLQSLLPE 53593
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 96.8 bits (205), Expect(3) = 1e-022
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = +2 / +2
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR* 337
KLLKETC+Y+KSLHREVDDLS+RLS LM+TMDN+SPQAEIIRSLLR*
Sbjct: 3773141 KLLKETCSYIKSLHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR* 3773281
Score = 49.6 bits (102), Expect(3) = 1e-022
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +2 / +1
Query: 83 GGRRGRISDDEINELISKLQALLPE 157
GG GRI+D+EINELISKLQALLPE
Sbjct: 3772738 GGGGGRITDEEINELISKLQALLPE 3772812
Score = 33.1 bits (66), Expect(3) = 1e-022
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2 / +2
Query: 353 PAMPLAAPVVRRARPPSSAACHLASCRSQRR 445
PA A P RR PSS C ASC RR
Sbjct: 4443845 PAPRAARPSCRRGAAPSSTGCSRASCGGPRR 4443937
>gb|AACV01013344.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013344, whole
genome shotgun sequence
Length = 27471
Score = 91.8 bits (194), Expect(2) = 6e-022
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +2 / -1
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR*L 340
KLLKETC+Y+KSLHREVDDLS+RLS LMA MD++SP AEIIRSLLR*L
Sbjct: 23286 KLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR*L 23143
Score = 43.7 bits (89), Expect(2) = 6e-022
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2 / -2
Query: 53 PLPPAGDMSSGGRRGRISDDEINELISKLQALLP 154
P PP S R +S++EINELISKLQ+LLP
Sbjct: 23681 PSPPPTMSSRRSSRSSVSEEEINELISKLQSLLP 23580
>ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 1531814
Score = 93.2 bits (197), Expect(2) = 7e-022
Identities = 40/47 (85%), Positives = 45/47 (95%)
Frame = +2 / -1
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR* 337
KLLKE C+Y+KSLHREVDDLSERLS LMATMD++SPQA+IIRSLLR*
Sbjct: 1525250 KLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 1525110
Score = 47.8 bits (98), Expect(2) = 7e-022
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2 / -1
Query: 74 MSSGGRRGRISDDEINELISKLQALLPE 157
MS GRI+DDEINELISKLQ+LLPE
Sbjct: 1525490 MSGRRASGRITDDEINELISKLQSLLPE 1525407
>gb|AACV01005419.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005419, whole
genome shotgun sequence
Length = 6043
Score = 90.4 bits (191), Expect(2) = 2e-021
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = +2 / -2
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR 334
KLLKETC Y+KSLHREVDDLS+RLS LMATMD++SP AEIIRS+LR
Sbjct: 1428 KLLKETCNYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSILR 1291
Score = 41.4 bits (84), Expect(2) = 2e-021
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +2 / -1
Query: 92 RGRISDDEINELISKLQALLP 154
RG IS++EINELISKLQ+LLP
Sbjct: 1756 RGSISEEEINELISKLQSLLP 1694
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0690H04
Length = 137319
Score = 91.8 bits (194), Expect(2) = 3e-021
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +2 / +3
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR*L 340
KLLKETC+Y+KSLHREVDDLS+RLS LMA MD++SP AEIIRSLLR*L
Sbjct: 84372 KLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR*L 84515
Score = 43.7 bits (89), Expect(2) = 3e-021
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2 / +1
Query: 53 PLPPAGDMSSGGRRGRISDDEINELISKLQALLP 154
P PP S R +S++EINELISKLQ+LLP
Sbjct: 83977 PSPPPTMSSRRSSRSSVSEEEINELISKLQSLLP 84078
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0425F05
Length = 162858
Score = 91.8 bits (194), Expect(2) = 4e-021
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +2 / +1
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR*L 340
KLLKETC+Y+KSLHREVDDLS+RLS LMA MD++SP AEIIRSLLR*L
Sbjct: 2122 KLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHNSPGAEIIRSLLR*L 2265
Score = 43.7 bits (89), Expect(2) = 4e-021
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 53 PLPPAGDMSSGGRRGRISDDEINELISKLQALLP 154
P PP S R +S++EINELISKLQ+LLP
Sbjct: 1727 PSPPPTMSSRRSSRSSVSEEEINELISKLQSLLP 1828
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 93.2 bits (197), Expect(2) = 5e-021
Identities = 40/47 (85%), Positives = 45/47 (95%)
Frame = +2 / -2
Query: 197 KLLKETCAYVKSLHREVDDLSERLSGLMATMDNDSPQAEIIRSLLR* 337
KLLKE C+Y+KSLHREVDDLSERLS LMATMD++SPQA+IIRSLLR*
Sbjct: 1401321 KLLKEMCSYIKSLHREVDDLSERLSELMATMDSNSPQADIIRSLLR* 1401181
Score = 47.8 bits (98), Expect(2) = 5e-021
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2 / -2
Query: 74 MSSGGRRGRISDDEINELISKLQALLPE 157
MS GRI+DDEINELISKLQ+LLPE
Sbjct: 1401561 MSGRRASGRITDDEINELISKLQSLLPE 1401478
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,008,532,487
Number of Sequences: 438736
Number of extensions: 48311692
Number of successful extensions: 476968
Number of sequences better than 1.0e-020: 23
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 170626521628
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)