TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3866402.2.1
(406 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AP003454.1| Oryza sativa (japonica cultivar-group) chro... 173 7e-042
gb|AACV01013161.1| Oryza sativa (japonica cultivar-group) c... 173 7e-042
dbj|AP007226.1| Oryza sativa (japonica cultivar-group) geno... 173 7e-042
dbj|AP007257.2| Oryza sativa (japonica cultivar-group) geno... 173 7e-042
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 173 7e-042
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 173 7e-042
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 173 7e-042
gb|CB659584.1|CB659584 OSJNEc16L01.r OSJNEc Oryza sativa (j... 151 3e-035
gb|AY324384.1| Oryza sativa (japonica cultivar-group) callo... 151 3e-035
dbj|AK105109.1| Oryza sativa (japonica cultivar-group) cDNA... 151 3e-035
ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA 151 3e-035
gb|C24849.1|C24849 C24849 Rice green shoot Oryza sativa (ja... 147 5e-034
gb|CB642890.1|CB642890 OSJNEb03E21.r OSJNEb Oryza sativa (j... 146 9e-034
gb|CB677903.1|CB677903 OSJNEe15F12.r OSJNEe Oryza sativa (j... 146 9e-034
dbj|AK062279.1| Oryza sativa (japonica cultivar-group) cDNA... 146 9e-034
dbj|AK105008.2| Oryza sativa (japonica cultivar-group) cDNA... 146 9e-034
ref|NM_187591.1| Oryza sativa (japonica cultivar-group), p... 146 9e-034
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 144 3e-033
dbj|AP004685.3| Oryza sativa (japonica cultivar-group) geno... 144 3e-033
dbj|AP005750.3| Oryza sativa (japonica cultivar-group) geno... 144 3e-033
gb|AACV01014975.1| Oryza sativa (japonica cultivar-group) c... 144 3e-033
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 144 3e-033
dbj|AP004082.3| Oryza sativa (japonica cultivar-group) geno... 142 2e-032
dbj|AP005290.2| Oryza sativa (japonica cultivar-group) geno... 142 2e-032
gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) c... 142 2e-032
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 142 2e-032
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 142 2e-032
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 142 2e-032
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 142 2e-032
dbj|AG209376.1| Oryza sativa (japonica cultivar-group) DNA,... 138 2e-031
dbj|AG210594.1| Oryza sativa (japonica cultivar-group) DNA,... 138 2e-031
gb|AC104427.2| Oryza sativa (japonica cultivar-group) chrom... 138 2e-031
gb|AC144426.1| Oryza sativa (japonica cultivar-group) chrom... 138 2e-031
gb|AACV01005795.1| Oryza sativa (japonica cultivar-group) c... 138 2e-031
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 138 2e-031
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 138 2e-031
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 138 2e-031
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 138 2e-031
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 138 2e-031
dbj|AG207902.1| Oryza sativa (japonica cultivar-group) DNA,... 136 1e-030
dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mito... 95 3e-028
ref|NM_187562.1| Oryza sativa (japonica cultivar-group), p... 125 3e-027
gb|CB666398.1|CB666398 OSJNEd13E16.f OSJNEd Oryza sativa (j... 123 7e-027
gb|CB666399.1|CB666399 OSJNEd13E16.r OSJNEd Oryza sativa (j... 123 7e-027
gb|CB671522.1|CB671522 OSJNEe05C09.r OSJNEe Oryza sativa (j... 123 7e-027
dbj|AK059373.1| Oryza sativa (japonica cultivar-group) cDNA... 123 7e-027
dbj|AK069531.1| Oryza sativa (japonica cultivar-group) cDNA... 123 7e-027
gb|AACV01001409.1| Oryza sativa (japonica cultivar-group) c... 123 1e-026
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 123 1e-026
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 123 1e-026
dbj|AP003447.2| Oryza sativa (japonica cultivar-group) geno... 123 1e-026
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 123 1e-026
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 123 1e-026
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 123 1e-026
ref|NM_193203.1| Oryza sativa (japonica cultivar-group), p... 122 3e-026
dbj|AK064446.1| Oryza sativa (japonica cultivar-group) cDNA... 114 1e-025
ref|NM_193211.1| Oryza sativa (japonica cultivar-group), p... 115 3e-025
gb|AACV01001413.1| Oryza sativa (japonica cultivar-group) c... 116 1e-024
dbj|AP003445.2| Oryza sativa (japonica cultivar-group) geno... 116 1e-024
gb|AC118980.2| Oryza sativa (japonica cultivar-group) chrom... 115 2e-024
gb|AACV01005773.1| Oryza sativa (japonica cultivar-group) c... 115 2e-024
gb|CB684141.1|CB684141 OSJNEf13F24.r OSJNEf Oryza sativa (j... 112 1e-023
dbj|AK059569.1| Oryza sativa (japonica cultivar-group) cDNA... 112 1e-023
dbj|AK071856.1| Oryza sativa (japonica cultivar-group) cDNA... 112 1e-023
ref|XM_550490.1| Oryza sativa (japonica cultivar-group), mRNA 112 1e-023
dbj|AB156041.1| Oryza sativa (japonica cultivar-group) DNA,... 111 3e-023
dbj|AG210620.1| Oryza sativa (japonica cultivar-group) DNA,... 110 7e-023
dbj|AK099782.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-021
dbj|AK120195.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-021
dbj|AK120402.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-021
gb|AACV01002367.1| Oryza sativa (japonica cultivar-group) c... 105 2e-021
ref|NM_191270.1| Oryza sativa (japonica cultivar-group), p... 105 2e-021
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 105 2e-021
dbj|AP003249.3| Oryza sativa (japonica cultivar-group) geno... 105 2e-021
dbj|AP003268.4| Oryza sativa (japonica cultivar-group) geno... 105 2e-021
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 105 2e-021
>dbj|AP003454.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone P0499E08, ***
SEQUENCING IN PROGRESS ***
Length = 85150
Score = 173 bits (373), Expect = 7e-042
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3 / -1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QISQASKPV+KAFGLWGSVKALSRGYEYLMGI+IFVPVAVLAWFPFVSEFQ RLLFNQAF
Sbjct: 38956 QISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAF 38777
Query: 206 SRGLQISRILAGGKKQ 159
SRGLQISRILAGGKKQ
Sbjct: 38776 SRGLQISRILAGGKKQ 38729
Score = 150 bits (323), Expect = 5e-035
Identities = 63/77 (81%), Positives = 65/77 (84%)
Frame = +1 / +3
Query: 157 LCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFTD 336
LCF PPAK+REI RPRL A LKS+L WNSET GNHASTATGTKM IPIRYSYPLERA TD
Sbjct: 38727 LCFFPPAKMREIWRPRLKAWLKSSLVWNSETKGNHASTATGTKMRIPIRYSYPLERALTD 38906
Query: 337 PQSPNALMTGLLA*DIC 387
P SP A TGLLA*DIC
Sbjct: 38907 PHSPKAFTTGLLA*DIC 38957
>gb|AACV01013161.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013161, whole
genome shotgun sequence
Length = 8989
Score = 173 bits (373), Expect = 7e-042
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3 / +1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QISQASKPV+KAFGLWGSVKALSRGYEYLMGI+IFVPVAVLAWFPFVSEFQ RLLFNQAF
Sbjct: 1225 QISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAF 1404
Query: 206 SRGLQISRILAGGKKQ 159
SRGLQISRILAGGKKQ
Sbjct: 1405 SRGLQISRILAGGKKQ 1452
Score = 150 bits (323), Expect = 5e-035
Identities = 63/77 (81%), Positives = 65/77 (84%)
Frame = +1 / -3
Query: 157 LCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFTD 336
LCF PPAK+REI RPRL A LKS+L WNSET GNHASTATGTKM IPIRYSYPLERA TD
Sbjct: 1454 LCFFPPAKMREIWRPRLKAWLKSSLVWNSETKGNHASTATGTKMRIPIRYSYPLERALTD 1275
Query: 337 PQSPNALMTGLLA*DIC 387
P SP A TGLLA*DIC
Sbjct: 1274 PHSPKAFTTGLLA*DIC 1224
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0036B04
Length = 136159
Score = 173 bits (373), Expect = 7e-042
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3 / -1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QISQASKPV+KAFGLWGSVKALSRGYEYLMGI+IFVPVAVLAWFPFVSEFQ RLLFNQAF
Sbjct: 11425 QISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAF 11246
Query: 206 SRGLQISRILAGGKKQ 159
SRGLQISRILAGGKKQ
Sbjct: 11245 SRGLQISRILAGGKKQ 11198
Score = 150 bits (323), Expect = 5e-035
Identities = 63/77 (81%), Positives = 65/77 (84%)
Frame = +1 / +3
Query: 157 LCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFTD 336
LCF PPAK+REI RPRL A LKS+L WNSET GNHASTATGTKM IPIRYSYPLERA TD
Sbjct: 11196 LCFFPPAKMREIWRPRLKAWLKSSLVWNSETKGNHASTATGTKMRIPIRYSYPLERALTD 11375
Query: 337 PQSPNALMTGLLA*DIC 387
P SP A TGLLA*DIC
Sbjct: 11376 PHSPKAFTTGLLA*DIC 11426
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0019L07
Length = 131650
Score = 173 bits (373), Expect = 7e-042
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3 / -1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QISQASKPV+KAFGLWGSVKALSRGYEYLMGI+IFVPVAVLAWFPFVSEFQ RLLFNQAF
Sbjct: 121819 QISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAF 121640
Query: 206 SRGLQISRILAGGKKQ 159
SRGLQISRILAGGKKQ
Sbjct: 121639 SRGLQISRILAGGKKQ 121592
Score = 150 bits (323), Expect = 5e-035
Identities = 63/77 (81%), Positives = 65/77 (84%)
Frame = +1 / +3
Query: 157 LCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFTD 336
LCF PPAK+REI RPRL A LKS+L WNSET GNHASTATGTKM IPIRYSYPLERA TD
Sbjct: 121590 LCFFPPAKMREIWRPRLKAWLKSSLVWNSETKGNHASTATGTKMRIPIRYSYPLERALTD 121769
Query: 337 PQSPNALMTGLLA*DIC 387
P SP A TGLLA*DIC
Sbjct: 121770 PHSPKAFTTGLLA*DIC 121820
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 173 bits (373), Expect = 7e-042
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3 / -1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QISQASKPV+KAFGLWGSVKALSRGYEYLMGI+IFVPVAVLAWFPFVSEFQ RLLFNQAF
Sbjct: 3910818 QISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAF 3910639
Query: 206 SRGLQISRILAGGKKQ 159
SRGLQISRILAGGKKQ
Sbjct: 3910638 SRGLQISRILAGGKKQ 3910591
Score = 150 bits (323), Expect = 5e-035
Identities = 63/77 (81%), Positives = 65/77 (84%)
Frame = +1 / +2
Query: 157 LCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFTD 336
LCF PPAK+REI RPRL A LKS+L WNSET GNHASTATGTKM IPIRYSYPLERA TD
Sbjct: 3910589 LCFFPPAKMREIWRPRLKAWLKSSLVWNSETKGNHASTATGTKMRIPIRYSYPLERALTD 3910768
Query: 337 PQSPNALMTGLLA*DIC 387
P SP A TGLLA*DIC
Sbjct: 3910769 PHSPKAFTTGLLA*DIC 3910819
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 173 bits (373), Expect = 7e-042
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3 / -2
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QISQASKPV+KAFGLWGSVKALSRGYEYLMGI+IFVPVAVLAWFPFVSEFQ RLLFNQAF
Sbjct: 3910818 QISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAF 3910639
Query: 206 SRGLQISRILAGGKKQ 159
SRGLQISRILAGGKKQ
Sbjct: 3910638 SRGLQISRILAGGKKQ 3910591
Score = 150 bits (323), Expect = 5e-035
Identities = 63/77 (81%), Positives = 65/77 (84%)
Frame = +1 / +2
Query: 157 LCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFTD 336
LCF PPAK+REI RPRL A LKS+L WNSET GNHASTATGTKM IPIRYSYPLERA TD
Sbjct: 3910589 LCFFPPAKMREIWRPRLKAWLKSSLVWNSETKGNHASTATGTKMRIPIRYSYPLERALTD 3910768
Query: 337 PQSPNALMTGLLA*DIC 387
P SP A TGLLA*DIC
Sbjct: 3910769 PHSPKAFTTGLLA*DIC 3910819
Score = 144 bits (310), Expect = 3e-033
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = -3 / -3
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP ++A GLWGS+KAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+LFNQAF
Sbjct: 29548847 QIAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAF 29548668
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G KK R
Sbjct: 29548667 SRGLQISRILGGHKKDR 29548617
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 173 bits (373), Expect = 7e-042
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -3 / -2
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QISQASKPV+KAFGLWGSVKALSRGYEYLMGI+IFVPVAVLAWFPFVSEFQ RLLFNQAF
Sbjct: 4078166 QISQASKPVVKAFGLWGSVKALSRGYEYLMGILIFVPVAVLAWFPFVSEFQTRLLFNQAF 4077987
Query: 206 SRGLQISRILAGGKKQ 159
SRGLQISRILAGGKKQ
Sbjct: 4077986 SRGLQISRILAGGKKQ 4077939
Score = 150 bits (323), Expect = 5e-035
Identities = 63/77 (81%), Positives = 65/77 (84%)
Frame = +1 / +1
Query: 157 LCFLPPAKIREI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERAFTD 336
LCF PPAK+REI RPRL A LKS+L WNSET GNHASTATGTKM IPIRYSYPLERA TD
Sbjct: 4077937 LCFFPPAKMREIWRPRLKAWLKSSLVWNSETKGNHASTATGTKMRIPIRYSYPLERALTD 4078116
Query: 337 PQSPNALMTGLLA*DIC 387
P SP A TGLLA*DIC
Sbjct: 4078117 PHSPKAFTTGLLA*DIC 4078167
Score = 144 bits (310), Expect = 3e-033
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = -3 / -1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP ++A GLWGS+KAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+LFNQAF
Sbjct: 30518091 QIAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAF 30517912
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G KK R
Sbjct: 30517911 SRGLQISRILGGHKKDR 30517861
>gb|CB659584.1|CB659584 OSJNEc16L01.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16L01 3', mRNA sequence
Length = 760
Score = 151 bits (325), Expect = 3e-035
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L ++QA KPVI GLWGS+KAL+RGYE +MG+++F P+A LAWFPFVSEFQ R+
Sbjct: 383 TGWGLLLVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRM 204
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK R
Sbjct: 203 LFNQAFSRGLQISRILGGHKKDR 135
>gb|AY324384.1| Oryza sativa (japonica cultivar-group) callose synthase-like protein
mRNA, partial cds
Length = 2727
Score = 151 bits (325), Expect = 3e-035
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L ++QA KPVI GLWGS+KAL+RGYE +MG+++F P+A LAWFPFVSEFQ R+
Sbjct: 2458 TGWGLLLVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRM 2637
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK R
Sbjct: 2638 LFNQAFSRGLQISRILGGHKKDR 2706
>dbj|AK105109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F07, full
insert sequence
Length = 1292
Score = 151 bits (325), Expect = 3e-035
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L ++QA KPVI GLWGS+KAL+RGYE +MG+++F P+A LAWFPFVSEFQ R+
Sbjct: 668 TGWGLLLVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRM 847
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK R
Sbjct: 848 LFNQAFSRGLQISRILGGHKKDR 916
>ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 5910
Score = 151 bits (325), Expect = 3e-035
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L ++QA KPVI GLWGS+KAL+RGYE +MG+++F P+A LAWFPFVSEFQ R+
Sbjct: 5641 TGWGLLLVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRM 5820
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK R
Sbjct: 5821 LFNQAFSRGLQISRILGGHKKDR 5889
>gb|C24849.1|C24849 C24849 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S15947_1A, mRNA sequence
Length = 460
Score = 147 bits (316), Expect = 5e-034
Identities = 56/83 (67%), Positives = 70/83 (84%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
+GW IL I+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+
Sbjct: 24 SGWGILXIAQACKPLARXAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRM 203
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK+R
Sbjct: 204 LFNQAFSRGLQISRILGGQKKER 272
>gb|CB642890.1|CB642890 OSJNEb03E21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03E21 3', mRNA sequence
Length = 769
Score = 146 bits (314), Expect = 9e-034
Identities = 56/83 (67%), Positives = 70/83 (84%)
Frame = -3 / -1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
+GW IL I+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+
Sbjct: 541 SGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRM 362
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK+R
Sbjct: 361 LFNQAFSRGLQISRILGGQKKER 293
>gb|CB677903.1|CB677903 OSJNEe15F12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15F12 3', mRNA sequence
Length = 804
Score = 146 bits (314), Expect = 9e-034
Identities = 56/83 (67%), Positives = 70/83 (84%)
Frame = -3 / -1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
+GW IL I+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+
Sbjct: 576 SGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRM 397
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK+R
Sbjct: 396 LFNQAFSRGLQISRILGGQKKER 328
>dbj|AK062279.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C02, full
insert sequence
Length = 2219
Score = 146 bits (314), Expect = 9e-034
Identities = 56/83 (67%), Positives = 70/83 (84%)
Frame = -3 / +2
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
+GW IL I+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+
Sbjct: 1607 SGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRM 1786
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK+R
Sbjct: 1787 LFNQAFSRGLQISRILGGQKKER 1855
>dbj|AK105008.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-G07, full
insert sequence
Length = 1992
Score = 146 bits (314), Expect = 9e-034
Identities = 56/83 (67%), Positives = 70/83 (84%)
Frame = -3 / +3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
+GW IL I+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+
Sbjct: 1308 SGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRM 1487
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK+R
Sbjct: 1488 LFNQAFSRGLQISRILGGQKKER 1556
>ref|NM_187591.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 4929
Score = 146 bits (314), Expect = 9e-034
Identities = 56/83 (67%), Positives = 70/83 (84%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
+GW IL I+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+
Sbjct: 4654 SGWGILLIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRM 4833
Query: 224 LFNQAFSRGLQISRILAGGKKQR 156
LFNQAFSRGLQISRIL G KK+R
Sbjct: 4834 LFNQAFSRGLQISRILGGQKKER 4902
>ref|NT_107235.1| Oryza sativa (japonica cultivar-group)
Length = 369247
Score = 144 bits (310), Expect = 3e-033
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = -3 / -1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP ++A GLWGS+KAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+LFNQAF
Sbjct: 155452 QIAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAF 155273
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G KK R
Sbjct: 155272 SRGLQISRILGGHKKDR 155222
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0017G10
Length = 166700
Score = 144 bits (310), Expect = 3e-033
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = -3 / -2
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP ++A GLWGS+KAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+LFNQAF
Sbjct: 155452 QIAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAF 155273
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G KK R
Sbjct: 155272 SRGLQISRILGGHKKDR 155222
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0069C14
Length = 150579
Score = 144 bits (310), Expect = 3e-033
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = -3 / -3
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP ++A GLWGS+KAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+LFNQAF
Sbjct: 16654 QIAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAF 16475
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G KK R
Sbjct: 16474 SRGLQISRILGGHKKDR 16424
>gb|AACV01014975.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014975, whole
genome shotgun sequence
Length = 9397
Score = 144 bits (310), Expect = 3e-033
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = -3 / +1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP ++A GLWGS+KAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+LFNQAF
Sbjct: 5065 QIAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAF 5244
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G KK R
Sbjct: 5245 SRGLQISRILGGHKKDR 5295
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 144 bits (310), Expect = 3e-033
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = -3 / -1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI+QA KP ++A GLWGS+KAL+RGYE LMG+++F P+A LAWFPFVSEFQ R+LFNQAF
Sbjct: 11850110 QIAQAIKPAVQAIGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAF 11849931
Query: 206 SRGLQISRILAGGKKQR 156
SRGLQISRIL G KK R
Sbjct: 11849930 SRGLQISRILGGHKKDR 11849880
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1149_C12
Length = 120743
Score = 142 bits (305), Expect = 2e-032
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = -3 / +1
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
+Q++QA KPVI GLWGS+KAL+RGYE +MG+++F P+A LAWFPFVSEFQ R+LFNQA
Sbjct: 93094 VQVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 93273
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G KK R
Sbjct: 93274 FSRGLQISRILGGHKKDR 93327
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1282_E10
Length = 107284
Score = 142 bits (305), Expect = 2e-032
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = -3 / +1
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
+Q++QA KPVI GLWGS+KAL+RGYE +MG+++F P+A LAWFPFVSEFQ R+LFNQA
Sbjct: 12925 VQVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 13104
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G KK R
Sbjct: 13105 FSRGLQISRILGGHKKDR 13158
>gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005686, whole
genome shotgun sequence
Length = 38041
Score = 142 bits (305), Expect = 2e-032
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = -3 / +3
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
+Q++QA KPVI GLWGS+KAL+RGYE +MG+++F P+A LAWFPFVSEFQ R+LFNQA
Sbjct: 7449 VQVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 7628
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G KK R
Sbjct: 7629 FSRGLQISRILGGHKKDR 7682
>ref|NT_107182.1| Oryza sativa (japonica cultivar-group)
Length = 1785023
Score = 142 bits (305), Expect = 2e-032
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = -3 / +2
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
+Q++QA KPVI GLWGS+KAL+RGYE +MG+++F P+A LAWFPFVSEFQ R+LFNQA
Sbjct: 1657652 VQVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 1657831
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G KK R
Sbjct: 1657832 FSRGLQISRILGGHKKDR 1657885
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 142 bits (305), Expect = 2e-032
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = -3 / +2
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
+Q++QA KPVI GLWGS+KAL+RGYE +MG+++F P+A LAWFPFVSEFQ R+LFNQA
Sbjct: 22451558 VQVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 22451737
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G KK R
Sbjct: 22451738 FSRGLQISRILGGHKKDR 22451791
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 142 bits (305), Expect = 2e-032
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = -3 / +1
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
+Q++QA KPVI GLWGS+KAL+RGYE +MG+++F P+A LAWFPFVSEFQ R+LFNQA
Sbjct: 35904622 VQVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 35904801
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G KK R
Sbjct: 35904802 FSRGLQISRILGGHKKDR 35904855
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 142 bits (305), Expect = 2e-032
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = -3 / +3
Query: 389 LQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQA 210
+Q++QA KPVI GLWGS+KAL+RGYE +MG+++F P+A LAWFPFVSEFQ R+LFNQA
Sbjct: 35822379 VQVAQAIKPVIVRIGLWGSIKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 35822558
Query: 209 FSRGLQISRILAGGKKQR 156
FSRGLQISRIL G KK R
Sbjct: 35822559 FSRGLQISRILGGHKKDR 35822612
>dbj|AG209376.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE6034_0_502_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE6034, genomic survey sequence
Length = 777
Score = 138 bits (297), Expect = 2e-031
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3 / -1
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ QI+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+LFNQ
Sbjct: 366 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 187
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G KK+R
Sbjct: 186 AFSRGLQISRILGGQKKER 130
>dbj|AG210594.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF2001_0_502_1A,
3' flanking sequence of Tos17 insertion in rice strain
NF2001, genomic survey sequence
Length = 599
Score = 138 bits (297), Expect = 2e-031
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3 / +1
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ QI+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+LFNQ
Sbjct: 313 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 492
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G KK+R
Sbjct: 493 AFSRGLQISRILGGQKKER 549
>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07,
complete sequence
Length = 117612
Score = 138 bits (297), Expect = 2e-031
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3 / -3
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ QI+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+LFNQ
Sbjct: 99706 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 99527
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G KK+R
Sbjct: 99526 AFSRGLQISRILGGQKKER 99470
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
complete sequence
Length = 127098
Score = 138 bits (297), Expect = 2e-031
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3 / -3
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ QI+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+LFNQ
Sbjct: 42094 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 41915
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G KK+R
Sbjct: 41914 AFSRGLQISRILGGQKKER 41858
>gb|AACV01005795.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005795, whole
genome shotgun sequence
Length = 23395
Score = 138 bits (297), Expect = 2e-031
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3 / +1
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ QI+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+LFNQ
Sbjct: 21340 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 21519
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G KK+R
Sbjct: 21520 AFSRGLQISRILGGQKKER 21576
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 138 bits (297), Expect = 2e-031
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3 / -2
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ QI+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+LFNQ
Sbjct: 1562531 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1562352
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G KK+R
Sbjct: 1562351 AFSRGLQISRILGGQKKER 1562295
Score = 115 bits (246), Expect = 2e-024
Identities = 45/74 (60%), Positives = 61/74 (82%)
Frame = -3 / +3
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
I+QI+ A KP++K GLW +V++L+R Y+ G++IFVP+A+ +WFPF+S FQ RLLFNQ
Sbjct: 1054800 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1054979
Query: 212 AFSRGLQISRILAG 171
AFSRGL+IS ILAG
Sbjct: 1054980 AFSRGLEISLILAG 1055021
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 138 bits (297), Expect = 2e-031
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3 / -3
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ QI+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+LFNQ
Sbjct: 1568587 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1568408
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G KK+R
Sbjct: 1568407 AFSRGLQISRILGGQKKER 1568351
Score = 115 bits (246), Expect = 2e-024
Identities = 45/74 (60%), Positives = 61/74 (82%)
Frame = -3 / +2
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
I+QI+ A KP++K GLW +V++L+R Y+ G++IFVP+A+ +WFPF+S FQ RLLFNQ
Sbjct: 1052978 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1053157
Query: 212 AFSRGLQISRILAG 171
AFSRGL+IS ILAG
Sbjct: 1053158 AFSRGLEISLILAG 1053199
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 138 bits (297), Expect = 2e-031
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3 / -2
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ QI+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+LFNQ
Sbjct: 1760949 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1760770
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G KK+R
Sbjct: 1760769 AFSRGLQISRILGGQKKER 1760713
Score = 115 bits (246), Expect = 2e-024
Identities = 45/74 (60%), Positives = 61/74 (82%)
Frame = -3 / +1
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
I+QI+ A KP++K GLW +V++L+R Y+ G++IFVP+A+ +WFPF+S FQ RLLFNQ
Sbjct: 1245340 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1245519
Query: 212 AFSRGLQISRILAG 171
AFSRGL+IS ILAG
Sbjct: 1245520 AFSRGLEISLILAG 1245561
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 138 bits (297), Expect = 2e-031
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3 / -3
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ QI+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+LFNQ
Sbjct: 1562531 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1562352
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G KK+R
Sbjct: 1562351 AFSRGLQISRILGGQKKER 1562295
Score = 115 bits (246), Expect = 2e-024
Identities = 45/74 (60%), Positives = 61/74 (82%)
Frame = -3 / +3
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
I+QI+ A KP++K GLW +V++L+R Y+ G++IFVP+A+ +WFPF+S FQ RLLFNQ
Sbjct: 1054800 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1054979
Query: 212 AFSRGLQISRILAG 171
AFSRGL+IS ILAG
Sbjct: 1054980 AFSRGLEISLILAG 1055021
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 138 bits (297), Expect = 2e-031
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3 / -2
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ QI+QA KP+ + GLWGSV+AL+R YE +MG+++F P+ +LAWFPFVSEFQ R+LFNQ
Sbjct: 1562533 LFQIAQACKPLARRAGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 1562354
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G KK+R
Sbjct: 1562353 AFSRGLQISRILGGQKKER 1562297
Score = 115 bits (246), Expect = 2e-024
Identities = 45/74 (60%), Positives = 61/74 (82%)
Frame = -3 / +2
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
I+QI+ A KP++K GLW +V++L+R Y+ G++IFVP+A+ +WFPF+S FQ RLLFNQ
Sbjct: 1054802 IIQIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRLLFNQ 1054981
Query: 212 AFSRGLQISRILAG 171
AFSRGL+IS ILAG
Sbjct: 1054982 AFSRGLEISLILAG 1055023
>dbj|AG207902.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE0035_0_405_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE0035, genomic survey sequence
Length = 333
Score = 136 bits (291), Expect = 1e-030
Identities = 52/79 (65%), Positives = 66/79 (83%)
Frame = -3 / +1
Query: 392 ILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQ 213
+ QI+QA KP+ + GLWGSV+AL+R Y +MG+++F P+ +LAWFPFVSEFQ R+LFNQ
Sbjct: 22 LFQIAQACKPLARRAGLWGSVRALARAYXIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 201
Query: 212 AFSRGLQISRILAGGKKQR 156
AFSRGLQISRIL G KK+R
Sbjct: 202 AFSRGLQISRILGGQKKER 258
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome
Length = 490520
Score = 95.0 bits (201), Expect(2) = 3e-028
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = -3 / +1
Query: 323 LSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAFSRGLQ 192
LSR EYLMGIVIFVPVAVLAWFPFVSEFQ RLLFNQAFSRGLQ
Sbjct: 454489 LSRLSEYLMGIVIFVPVAVLAWFPFVSEFQTRLLFNQAFSRGLQ 454620
Score = 95.0 bits (201), Expect(2) = 3e-028
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = -3 / +1
Query: 323 LSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAFSRGLQ 192
LSR EYLMGIVIFVPVAVLAWFPFVSEFQ RLLFNQAFSRGLQ
Sbjct: 373402 LSRLSEYLMGIVIFVPVAVLAWFPFVSEFQTRLLFNQAFSRGLQ 373533
Score = 89.0 bits (188), Expect(2) = 3e-024
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1 / -1
Query: 187 EI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERA 327
++* PRL A*L SNL WNSETNGNHASTATGTKMTIPIRYS L+R+
Sbjct: 373538 QL*SPRLKA*LNSNLVWNSETNGNHASTATGTKMTIPIRYSESLDRS 373398
Score = 89.0 bits (188), Expect(2) = 3e-024
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1 / -1
Query: 187 EI*RPRLNA*LKSNLAWNSETNGNHASTATGTKMTIPIRYSYPLERA 327
++* PRL A*L SNL WNSETNGNHASTATGTKMTIPIRYS L+R+
Sbjct: 454625 QL*SPRLKA*LNSNLVWNSETNGNHASTATGTKMTIPIRYSESLDRS 454485
Score = 84.9 bits (179), Expect(2) = 4e-021
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -1 / +2
Query: 316 GGMST*WGLSSSXRWLCWHGSHLSRSSRRDCFLIRHLAEAFKSL 185
G +ST*WG SSS RW CWHGSHLSRSSRRDC+ IR AE FK++
Sbjct: 454496 GSLST*WGSSSSSRWRCWHGSHLSRSSRRDCYSIRPSAEGFKAV 454627
Score = 84.9 bits (179), Expect(2) = 4e-021
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -1 / +2
Query: 316 GGMST*WGLSSSXRWLCWHGSHLSRSSRRDCFLIRHLAEAFKSL 185
G +ST*WG SSS RW CWHGSHLSRSSRRDC+ IR AE FK++
Sbjct: 373409 GSLST*WGSSSSSRWRCWHGSHLSRSSRRDCYSIRPSAEGFKAV 373540
Score = 52.8 bits (109), Expect(2) = 3e-028
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -3 / +3
Query: 395 AILQISQASKPVIKAFGLWGSVKAL 321
++ QISQASKPV+KAFGLWGSVKAL
Sbjct: 454428 SLQQISQASKPVVKAFGLWGSVKAL 454502
Score = 52.8 bits (109), Expect(2) = 3e-028
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -3 / +3
Query: 395 AILQISQASKPVIKAFGLWGSVKAL 321
++ QISQASKPV+KAFGLWGSVKAL
Sbjct: 373341 SLQQISQASKPVVKAFGLWGSVKAL 373415
Score = 45.5 bits (93), Expect(2) = 3e-024
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +1 / -2
Query: 319 ERAFTDPQSPNALMTGLLA*DICRMAH 399
+RA TDP SPNAL TGLLA DIC H
Sbjct: 373417 QRALTDPHSPNALTTGLLACDICCKDH 373337
Score = 45.5 bits (93), Expect(2) = 3e-024
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +1 / -2
Query: 319 ERAFTDPQSPNALMTGLLA*DICRMAH 399
+RA TDP SPNAL TGLLA DIC H
Sbjct: 454504 QRALTDPHSPNALTTGLLACDICCKDH 454424
Score = 39.1 bits (79), Expect(2) = 4e-021
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = -2 / +2
Query: 390 SADISSK*TGHQGVWALGIREGPL 319
+ DI+SK*TG QG+WA+GI +G L
Sbjct: 454433 TTDIASK*TGGQGIWAVGICQGSL 454504
Score = 39.1 bits (79), Expect(2) = 4e-021
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = -2 / +2
Query: 390 SADISSK*TGHQGVWALGIREGPL 319
+ DI+SK*TG QG+WA+GI +G L
Sbjct: 373346 TTDIASK*TGGQGIWAVGICQGSL 373417
>ref|NM_187562.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 6168
Score = 125 bits (267), Expect = 3e-027
Identities = 50/91 (54%), Positives = 66/91 (72%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+ A KP++K GLW +V++L+R Y+ G++IFVP+A+ +WFPF+S FQ RL
Sbjct: 4606 TGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRL 4785
Query: 224 LFNQAFSRGLQISRILAGGKKQR*C*FRKHS 132
LFNQAFSRGL+IS ILAG R HS
Sbjct: 4786 LFNQAFSRGLEISLILAGNNPNAGSCVRVHS 4878
>gb|CB666398.1|CB666398 OSJNEd13E16.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13E16 5', mRNA sequence
Length = 803
Score = 123 bits (264), Expect = 7e-027
Identities = 47/78 (60%), Positives = 63/78 (80%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+ A KP++K GLW +V++L+R Y+ G++IFVP+A+ +WFPF+S FQ RL
Sbjct: 259 TGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRL 438
Query: 224 LFNQAFSRGLQISRILAG 171
LFNQAFSRGL+IS ILAG
Sbjct: 439 LFNQAFSRGLEISLILAG 492
>gb|CB666399.1|CB666399 OSJNEd13E16.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13E16 3', mRNA sequence
Length = 802
Score = 123 bits (264), Expect = 7e-027
Identities = 47/78 (60%), Positives = 63/78 (80%)
Frame = -3 / -3
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+ A KP++K GLW +V++L+R Y+ G++IFVP+A+ +WFPF+S FQ RL
Sbjct: 554 TGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRL 375
Query: 224 LFNQAFSRGLQISRILAG 171
LFNQAFSRGL+IS ILAG
Sbjct: 374 LFNQAFSRGLEISLILAG 321
>gb|CB671522.1|CB671522 OSJNEe05C09.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05C09 3', mRNA sequence
Length = 757
Score = 123 bits (264), Expect = 7e-027
Identities = 47/78 (60%), Positives = 63/78 (80%)
Frame = -3 / -1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+ A KP++K GLW +V++L+R Y+ G++IFVP+A+ +WFPF+S FQ RL
Sbjct: 508 TGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRL 329
Query: 224 LFNQAFSRGLQISRILAG 171
LFNQAFSRGL+IS ILAG
Sbjct: 328 LFNQAFSRGLEISLILAG 275
>dbj|AK059373.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-F03, full
insert sequence
Length = 1245
Score = 123 bits (264), Expect = 7e-027
Identities = 47/78 (60%), Positives = 63/78 (80%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+ A KP++K GLW +V++L+R Y+ G++IFVP+A+ +WFPF+S FQ RL
Sbjct: 808 TGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRL 987
Query: 224 LFNQAFSRGLQISRILAG 171
LFNQAFSRGL+IS ILAG
Sbjct: 988 LFNQAFSRGLEISLILAG 1041
>dbj|AK069531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020O14, full
insert sequence
Length = 2087
Score = 123 bits (264), Expect = 7e-027
Identities = 47/78 (60%), Positives = 63/78 (80%)
Frame = -3 / +1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW +L I+ A KP++K GLW +V++L+R Y+ G++IFVP+A+ +WFPF+S FQ RL
Sbjct: 1576 TGWGVLSIAVAWKPIVKKLGLWKTVRSLARLYDAGTGMIIFVPIAIFSWFPFISTFQTRL 1755
Query: 224 LFNQAFSRGLQISRILAG 171
LFNQAFSRGL+IS ILAG
Sbjct: 1756 LFNQAFSRGLEISLILAG 1809
>gb|AACV01001409.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001409, whole
genome shotgun sequence
Length = 30879
Score = 123 bits (263), Expect = 1e-026
Identities = 50/74 (67%), Positives = 59/74 (79%)
Frame = -3 / -1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI QA P++K LW S+ L R YE LMG+V+F+P+ +L+WFPFVSEFQ RLLFNQAF
Sbjct: 7959 QIGQACSPLVKKAMLWDSIMELGRSYENLMGLVLFLPIGLLSWFPFVSEFQTRLLFNQAF 7780
Query: 206 SRGLQISRILAGGK 165
SRGLQISRILAG K
Sbjct: 7779 SRGLQISRILAGQK 7738
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 123 bits (263), Expect = 1e-026
Identities = 50/74 (67%), Positives = 59/74 (79%)
Frame = -3 / -1
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI QA P++K LW S+ L R YE LMG+V+F+P+ +L+WFPFVSEFQ RLLFNQAF
Sbjct: 19333641 QIGQACSPLVKKAMLWDSIMELGRSYENLMGLVLFLPIGLLSWFPFVSEFQTRLLFNQAF 19333462
Query: 206 SRGLQISRILAGGK 165
SRGLQISRILAG K
Sbjct: 19333461 SRGLQISRILAGQK 19333420
Score = 116 bits (248), Expect = 1e-024
Identities = 46/67 (68%), Positives = 56/67 (83%)
Frame = -3 / -1
Query: 371 SKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAFSRGLQ 192
S+ V++ G W S++ ++R YEY MGI+IF P+AVL+WFPFVSEFQ RLLFNQAFSRGLQ
Sbjct: 19378671 SRDVLRKIGPWDSIQEMARMYEYTMGILIFFPIAVLSWFPFVSEFQTRLLFNQAFSRGLQ 19378492
Query: 191 ISRILAG 171
ISRIL G
Sbjct: 19378491 ISRILTG 19378471
Score = 105 bits (224), Expect = 2e-021
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = -3 / -1
Query: 404 TGWAILQISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARL 225
TGW ++ I+Q +P I++ +W SV +++R YE L+G+ + PVA +W P E Q R+
Sbjct: 31716948 TGWGLISIAQVIRPFIESTVVWASVVSVARLYEILLGVFVMAPVAFFSWLPGFQEMQTRV 31716769
Query: 224 LFNQAFSRGLQISRILAGGK 165
LFN+AFSRGLQISRILAG K
Sbjct: 31716768 LFNEAFSRGLQISRILAGKK 31716709
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 123 bits (263), Expect = 1e-026
Identities = 50/74 (67%), Positives = 59/74 (79%)
Frame = -3 / -3
Query: 386 QISQASKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAF 207
QI QA P++K LW S+ L R YE LMG+V+F+P+ +L+WFPFVSEFQ RLLFNQAF
Sbjct: 2251873 QIGQACSPLVKKAMLWDSIMELGRSYENLMGLVLFLPIGLLSWFPFVSEFQTRLLFNQAF 2251694
Query: 206 SRGLQISRILAGGK 165
SRGLQISRILAG K
Sbjct: 2251693 SRGLQISRILAGQK 2251652
Score = 116 bits (248), Expect = 1e-024
Identities = 46/67 (68%), Positives = 56/67 (83%)
Frame = -3 / -3
Query: 371 SKPVIKAFGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQARLLFNQAFSRGLQ 192
S+ V++ G W S++ ++R YEY MGI+IF P+AVL+WFPFVSEFQ RLLFNQAFSRGLQ
Sbjct: 2296903 SRDVLRKIGPWDSIQEMARMYEYTMGILIFFPIAVLSWFPFVSEFQTRLLFNQAFSRGLQ 2296724
Query: 191 ISRILAG 171
ISRIL G
Sbjct: 2296723 ISRILTG 2296703
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,037,630,638
Number of Sequences: 438736
Number of extensions: 46779540
Number of successful extensions: 285186
Number of sequences better than 1.0e-020: 100
length of database: 933,473,305
effective HSP length: 57
effective length of database: 908,465,353
effective search space used: 69951832181
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)